Query 015251
Match_columns 410
No_of_seqs 156 out of 1748
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 09:20:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.2 2.6E-08 8.8E-13 92.1 27.3 251 81-385 13-280 (306)
2 4asc_A Kelch repeat and BTB do 99.2 1.7E-08 5.8E-13 93.8 26.1 202 92-320 13-228 (315)
3 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 3.3E-11 1.1E-15 80.6 3.3 45 21-65 5-49 (53)
4 2woz_A Kelch repeat and BTB do 99.1 8.2E-08 2.8E-12 89.2 27.8 240 93-383 25-293 (318)
5 2e31_A FBS1, F-box only protei 99.1 3.3E-11 1.1E-15 109.3 3.8 51 20-70 46-97 (297)
6 2vpj_A Kelch-like protein 12; 99.1 6.6E-08 2.3E-12 89.0 24.7 212 123-384 58-285 (301)
7 1zgk_A Kelch-like ECH-associat 99.1 4E-08 1.4E-12 91.0 23.3 212 124-385 67-295 (308)
8 2xn4_A Kelch-like protein 2; s 99.0 5.8E-08 2E-12 89.5 21.9 211 124-384 58-283 (302)
9 3ii7_A Kelch-like protein 7; p 99.0 4.7E-08 1.6E-12 90.3 19.8 196 138-384 23-232 (306)
10 2vpj_A Kelch-like protein 12; 98.9 2E-07 6.7E-12 85.8 21.8 196 139-384 31-238 (301)
11 2uvk_A YJHT; unknown function, 98.9 6.5E-08 2.2E-12 91.4 18.4 180 123-321 15-236 (357)
12 2xn4_A Kelch-like protein 2; s 98.9 2.2E-07 7.4E-12 85.6 20.2 196 139-384 30-236 (302)
13 1zgk_A Kelch-like ECH-associat 98.9 1.2E-07 4E-12 87.8 18.2 201 138-384 38-247 (308)
14 4asc_A Kelch repeat and BTB do 98.6 2.1E-06 7E-11 79.6 18.8 171 123-319 94-283 (315)
15 2uvk_A YJHT; unknown function, 98.6 5.7E-06 2E-10 77.9 21.6 257 92-384 31-349 (357)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.6 0.00013 4.3E-09 70.6 30.1 50 20-69 14-63 (445)
17 3v7d_B Cell division control p 98.5 0.00013 4.6E-09 70.7 29.5 41 23-63 13-54 (464)
18 2woz_A Kelch repeat and BTB do 98.5 2.7E-06 9.2E-11 78.9 16.0 171 123-319 105-293 (318)
19 2zwa_A Leucine carboxyl methyl 98.5 7.2E-06 2.5E-10 84.6 19.9 212 126-385 396-643 (695)
20 1p22_A F-BOX/WD-repeat protein 98.3 9.8E-05 3.4E-09 71.2 22.0 42 23-64 9-54 (435)
21 1k3i_A Galactose oxidase precu 98.1 5.4E-05 1.9E-09 77.5 15.0 108 140-269 220-329 (656)
22 3l2o_B F-box only protein 4; s 97.9 2.4E-06 8.2E-11 76.6 0.7 49 22-70 2-50 (312)
23 2zwa_A Leucine carboxyl methyl 97.6 0.0013 4.3E-08 67.8 16.3 154 206-385 412-591 (695)
24 2ast_B S-phase kinase-associat 97.6 2.2E-05 7.6E-10 73.1 2.4 45 21-65 5-49 (336)
25 1k3i_A Galactose oxidase precu 96.8 0.0042 1.4E-07 63.4 10.3 145 209-383 169-329 (656)
26 2p1m_B Transport inhibitor res 96.8 0.00028 9.6E-09 71.0 1.5 36 23-58 4-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.001 3.5E-08 66.8 1.5 35 25-59 13-48 (592)
28 2z2n_A Virginiamycin B lyase; 91.8 6.1 0.00021 34.4 20.3 193 122-381 104-299 (299)
29 3q7m_A Lipoprotein YFGL, BAMB; 88.9 8.3 0.00028 35.3 14.1 116 232-383 47-168 (376)
30 3dsm_A Uncharacterized protein 88.7 13 0.00045 33.4 16.6 195 127-382 2-217 (328)
31 3jro_A Fusion protein of prote 84.9 28 0.00094 35.5 16.6 140 206-378 77-239 (753)
32 4e54_B DNA damage-binding prot 83.2 25 0.00085 32.8 14.5 186 138-380 141-330 (435)
33 3hfq_A Uncharacterized protein 81.3 29 0.00099 30.9 24.7 149 206-385 162-327 (347)
34 3q7m_A Lipoprotein YFGL, BAMB; 79.7 35 0.0012 30.9 16.2 136 206-383 198-343 (376)
35 1q7f_A NHL, brain tumor CG1071 79.7 29 0.001 29.9 20.8 192 125-377 86-280 (286)
36 3jrp_A Fusion protein of prote 79.4 34 0.0012 30.5 19.3 141 206-379 79-242 (379)
37 1ri6_A Putative isomerase YBHE 79.0 33 0.0011 30.1 13.6 142 206-383 15-167 (343)
38 3hfq_A Uncharacterized protein 78.0 37 0.0013 30.2 16.1 123 238-383 50-178 (347)
39 1l0q_A Surface layer protein; 76.1 45 0.0015 30.1 20.5 178 137-382 10-194 (391)
40 3jrp_A Fusion protein of prote 75.5 44 0.0015 29.7 16.3 105 254-384 182-295 (379)
41 2ojh_A Uncharacterized protein 75.4 37 0.0013 28.8 15.9 204 122-384 47-265 (297)
42 3bws_A Protein LP49; two-domai 74.6 49 0.0017 30.3 13.5 110 238-381 133-247 (433)
43 1l0q_A Surface layer protein; 73.8 51 0.0017 29.7 21.4 191 122-381 37-237 (391)
44 3bws_A Protein LP49; two-domai 73.3 56 0.0019 29.9 20.6 196 124-383 177-396 (433)
45 3scy_A Hypothetical bacterial 72.8 52 0.0018 29.4 16.8 34 351-384 214-249 (361)
46 3mbr_X Glutamine cyclotransfer 72.7 46 0.0016 28.7 14.6 112 236-385 28-142 (243)
47 3dsm_A Uncharacterized protein 69.6 61 0.0021 28.8 20.0 193 126-381 52-257 (328)
48 3ei3_B DNA damage-binding prot 68.7 66 0.0023 28.9 22.9 184 138-380 95-285 (383)
49 3nol_A Glutamine cyclotransfer 68.6 60 0.002 28.4 12.2 108 236-381 50-159 (262)
50 3sjl_D Methylamine dehydrogena 68.2 77 0.0026 29.4 14.1 120 237-388 236-375 (386)
51 1ri6_A Putative isomerase YBHE 65.7 68 0.0023 27.9 22.4 149 206-385 151-318 (343)
52 3scy_A Hypothetical bacterial 62.8 84 0.0029 28.0 22.0 118 238-384 221-346 (361)
53 2ad6_A Methanol dehydrogenase 62.3 69 0.0024 31.4 12.0 121 232-384 56-192 (571)
54 2dg1_A DRP35, lactonase; beta 60.8 86 0.0029 27.4 20.2 212 125-385 53-271 (333)
55 3e5z_A Putative gluconolactona 60.3 83 0.0028 27.1 16.5 28 356-383 265-292 (296)
56 4gqb_B Methylosome protein 50; 59.6 98 0.0034 27.7 17.7 195 126-382 92-294 (344)
57 1kb0_A Quinohemoprotein alcoho 57.9 55 0.0019 32.9 10.6 122 232-384 71-206 (677)
58 3hrp_A Uncharacterized protein 57.9 1.2E+02 0.004 28.1 14.2 115 237-383 140-255 (409)
59 3g4e_A Regucalcin; six bladed 57.3 96 0.0033 26.9 21.2 204 124-385 21-238 (297)
60 2ojh_A Uncharacterized protein 56.6 88 0.003 26.2 18.7 138 138-309 21-160 (297)
61 3nok_A Glutaminyl cyclase; bet 54.9 1.1E+02 0.0037 26.8 11.6 109 236-385 62-173 (268)
62 3p5b_L Low density lipoprotein 54.5 1.3E+02 0.0046 27.7 13.2 30 236-270 298-328 (400)
63 2dg1_A DRP35, lactonase; beta 54.1 1.1E+02 0.0038 26.7 12.0 114 238-383 55-177 (333)
64 3u4y_A Uncharacterized protein 53.8 1.1E+02 0.0038 26.5 22.5 191 127-380 9-210 (331)
65 4e54_B DNA damage-binding prot 53.7 1.4E+02 0.0047 27.5 14.3 31 352-382 405-435 (435)
66 3amr_A 3-phytase; beta-propell 53.2 1.4E+02 0.0047 27.4 13.0 145 138-308 98-262 (355)
67 1yiq_A Quinohemoprotein alcoho 53.1 1.1E+02 0.0037 30.8 11.8 122 232-383 64-198 (689)
68 3e5z_A Putative gluconolactona 52.6 1.1E+02 0.0038 26.2 22.0 190 138-386 49-255 (296)
69 4aez_A CDC20, WD repeat-contai 52.3 1.4E+02 0.0046 27.1 20.6 133 138-309 112-248 (401)
70 2hqs_A Protein TOLB; TOLB, PAL 51.3 1.5E+02 0.0051 27.3 20.1 184 139-383 159-350 (415)
71 1kv9_A Type II quinohemoprotei 51.1 1.4E+02 0.0049 29.8 12.3 122 232-384 60-194 (668)
72 1nir_A Nitrite reductase; hemo 49.9 1.9E+02 0.0063 28.0 18.3 118 238-381 334-462 (543)
73 3dwl_C Actin-related protein 2 49.4 1.4E+02 0.0048 26.4 17.2 137 138-308 32-176 (377)
74 4g56_B MGC81050 protein; prote 47.1 1.6E+02 0.0054 26.3 16.9 194 126-382 104-306 (357)
75 1jmx_B Amine dehydrogenase; ox 47.0 1.4E+02 0.0049 25.8 11.7 28 353-382 153-180 (349)
76 3no2_A Uncharacterized protein 46.8 1.4E+02 0.0048 25.7 14.6 140 206-382 56-200 (276)
77 1nir_A Nitrite reductase; hemo 45.0 2.2E+02 0.0075 27.4 17.9 194 126-383 147-361 (543)
78 2aq5_A Coronin-1A; WD40 repeat 44.9 1.8E+02 0.006 26.3 18.8 192 138-386 153-351 (402)
79 1flg_A Protein (quinoprotein e 44.5 2.4E+02 0.0081 27.6 14.8 78 232-319 62-144 (582)
80 1ddw_A GLGF-domain protein hom 42.8 67 0.0023 24.3 6.3 39 139-183 11-50 (120)
81 3v9f_A Two-component system se 42.5 2.8E+02 0.0096 27.9 22.6 200 127-384 323-531 (781)
82 3no2_A Uncharacterized protein 42.3 1.7E+02 0.0057 25.2 14.5 142 206-385 15-163 (276)
83 1gxr_A ESG1, transducin-like e 41.6 1.7E+02 0.0057 25.1 21.3 195 125-382 60-260 (337)
84 1w6s_A Methanol dehydrogenase 41.5 1.9E+02 0.0063 28.6 11.2 31 232-268 56-90 (599)
85 3m0c_C LDL receptor, low-densi 39.8 3.3E+02 0.011 27.9 13.0 24 236-264 610-633 (791)
86 2z2n_A Virginiamycin B lyase; 39.5 1.7E+02 0.0059 24.6 23.4 198 122-386 62-263 (299)
87 1q7f_A NHL, brain tumor CG1071 39.4 1.7E+02 0.0059 24.7 24.6 206 122-385 35-246 (286)
88 2bkl_A Prolyl endopeptidase; m 39.2 3E+02 0.01 27.3 19.7 143 139-309 202-349 (695)
89 2hqs_A Protein TOLB; TOLB, PAL 39.0 2.3E+02 0.0079 25.9 20.6 184 139-384 203-394 (415)
90 3hxj_A Pyrrolo-quinoline quino 39.0 92 0.0032 27.1 7.9 30 353-382 260-289 (330)
91 4gga_A P55CDC, cell division c 38.5 2.3E+02 0.0078 25.8 21.7 146 125-309 114-261 (420)
92 3v9f_A Two-component system se 37.6 3.3E+02 0.011 27.4 25.1 145 206-384 469-618 (781)
93 3dwl_C Actin-related protein 2 35.9 63 0.0021 28.9 6.4 139 206-378 33-178 (377)
94 3zwl_B Eukaryotic translation 35.7 2.2E+02 0.0074 24.7 20.3 34 350-383 221-255 (369)
95 1evh_A WH1 domain, protein (ME 35.3 69 0.0024 23.8 5.3 40 140-183 12-51 (112)
96 1pjx_A Dfpase, DIISOPROPYLFLUO 34.0 2.2E+02 0.0075 24.2 21.5 195 138-380 45-259 (314)
97 2ghs_A AGR_C_1268P; regucalcin 33.0 2.5E+02 0.0086 24.6 14.2 47 238-295 60-107 (326)
98 2hz6_A Endoplasmic reticulum t 32.7 10 0.00035 34.9 0.3 27 233-265 4-30 (369)
99 3v7d_B Cell division control p 32.3 2.9E+02 0.01 25.2 15.2 94 254-382 332-426 (464)
100 1i2h_A PSD-ZIP45(homer-1C/VESL 32.2 1E+02 0.0035 24.9 6.1 38 140-183 17-55 (168)
101 2iwa_A Glutamine cyclotransfer 31.8 2.5E+02 0.0087 24.3 15.9 109 239-384 32-143 (266)
102 1n7d_A LDL receptor, low-densi 31.7 1.9E+02 0.0065 29.1 9.6 61 206-271 562-623 (699)
103 2vdu_B TRNA (guanine-N(7)-)-me 31.5 3.1E+02 0.01 25.1 22.3 193 138-382 170-398 (450)
104 3v65_B Low-density lipoprotein 31.5 3E+02 0.01 25.0 18.2 107 127-269 87-196 (386)
105 2xzh_A Clathrin heavy chain 1; 30.8 3.1E+02 0.011 25.0 10.0 34 350-383 263-296 (365)
106 1k8k_C P40, ARP2/3 complex 41 30.7 2.7E+02 0.0092 24.2 20.8 193 138-381 29-237 (372)
107 2kwv_A RAD30 homolog B, DNA po 30.3 25 0.00084 21.5 1.6 20 24-43 20-39 (48)
108 4a2l_A BT_4663, two-component 30.1 4.4E+02 0.015 26.5 23.2 203 125-384 271-487 (795)
109 3vgz_A Uncharacterized protein 29.5 2.7E+02 0.0094 24.0 13.6 144 206-383 69-221 (353)
110 1pjx_A Dfpase, DIISOPROPYLFLUO 29.5 2.6E+02 0.0089 23.7 11.7 30 238-272 28-64 (314)
111 3g4e_A Regucalcin; six bladed 29.5 2.7E+02 0.0092 23.8 15.0 30 238-272 24-53 (297)
112 1ijq_A LDL receptor, low-densi 29.5 2.9E+02 0.0098 24.2 13.0 115 122-265 126-240 (316)
113 3hrp_A Uncharacterized protein 29.0 3.4E+02 0.012 24.9 21.9 218 121-386 135-363 (409)
114 2z3z_A Dipeptidyl aminopeptida 28.5 4.3E+02 0.015 25.9 15.0 211 125-383 129-397 (706)
115 1rwi_B Serine/threonine-protei 28.4 2.5E+02 0.0086 23.2 12.4 57 238-305 77-134 (270)
116 1egx_A VAsp, vasodilator-stimu 28.3 1E+02 0.0035 23.0 5.2 41 140-183 12-52 (115)
117 3i2n_A WD repeat-containing pr 28.1 2.9E+02 0.0099 23.8 20.7 31 349-379 323-355 (357)
118 1rwi_B Serine/threonine-protei 27.8 2.6E+02 0.0088 23.1 20.0 188 125-379 75-266 (270)
119 2iwa_A Glutamine cyclotransfer 27.3 3E+02 0.01 23.8 16.4 158 126-324 30-190 (266)
120 3vl1_A 26S proteasome regulato 27.0 3.4E+02 0.012 24.2 18.1 213 120-378 185-420 (420)
121 2fp8_A Strictosidine synthase; 26.7 3.1E+02 0.011 23.7 12.3 30 238-272 29-58 (322)
122 3vgz_A Uncharacterized protein 26.3 3.1E+02 0.011 23.6 25.4 203 123-382 96-308 (353)
123 3mkq_A Coatomer beta'-subunit; 25.2 5.1E+02 0.018 25.7 20.7 178 138-381 76-263 (814)
124 3v65_B Low-density lipoprotein 24.7 3.9E+02 0.013 24.2 12.0 32 236-272 296-328 (386)
125 2qc5_A Streptogramin B lactona 24.6 3.1E+02 0.01 22.9 21.9 198 122-386 67-268 (300)
126 1yfq_A Cell cycle arrest prote 24.3 3.3E+02 0.011 23.2 22.9 195 137-381 77-286 (342)
127 3m0c_C LDL receptor, low-densi 24.3 5.8E+02 0.02 26.0 18.0 61 238-309 569-630 (791)
128 3lrv_A PRE-mRNA-splicing facto 23.6 3.6E+02 0.012 23.4 19.0 150 121-309 88-244 (343)
129 3nol_A Glutamine cyclotransfer 23.6 3.6E+02 0.012 23.3 15.0 134 127-297 52-190 (262)
130 2lyd_A Decapping protein 1; DC 22.9 71 0.0024 24.7 3.5 29 360-388 30-58 (134)
131 1ugj_A Riken cDNA 2310057J16 p 22.6 1.6E+02 0.0056 22.8 5.5 77 127-221 55-134 (141)
132 1kb0_A Quinohemoprotein alcoho 22.4 5.8E+02 0.02 25.3 14.5 53 207-265 88-149 (677)
133 2dk7_A Transcription elongatio 22.2 75 0.0026 21.6 3.0 19 361-379 23-41 (73)
134 1yiq_A Quinohemoprotein alcoho 22.1 5.9E+02 0.02 25.3 16.8 106 207-319 81-200 (689)
135 2aq5_A Coronin-1A; WD40 repeat 21.9 4.2E+02 0.015 23.5 27.0 199 127-384 93-308 (402)
136 3u4y_A Uncharacterized protein 21.4 3.8E+02 0.013 22.8 14.3 107 239-382 10-122 (331)
137 3mbr_X Glutamine cyclotransfer 21.3 3.8E+02 0.013 22.8 16.9 140 206-382 43-184 (243)
138 1k8k_C P40, ARP2/3 complex 41 21.3 4E+02 0.014 23.0 16.3 138 206-376 30-172 (372)
139 3mmy_A MRNA export factor; mRN 21.0 4E+02 0.014 22.9 21.2 32 350-381 276-308 (368)
140 2qc5_A Streptogramin B lactona 20.9 3.6E+02 0.012 22.4 23.8 197 121-384 24-224 (300)
141 3fm0_A Protein CIAO1; WDR39,SG 20.6 4.2E+02 0.015 23.1 19.5 181 138-375 37-223 (345)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.17 E-value=2.6e-08 Score=92.09 Aligned_cols=251 Identities=10% Similarity=-0.010 Sum_probs=149.0
Q ss_pred eEEEeecCCCCceEEEEeCCCCcccccccc-CCCCCCCCCeEEEeccCceEEEeecc---CCceEEEEcccccceeeCCC
Q 015251 81 CLILHCDFPIRNQLCFIDFSDNQDKVRKFN-MPFQAKMPEFDAVGSCNGLLCLSDSL---FNDAICIYNPFTRDYIELPK 156 (410)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~Gll~l~~~~---~~~~~~V~NP~T~~~~~LP~ 156 (410)
.++++........+..+|+... .+..++ .|. ..........+|.|.+..+. ....++++||.|++|..+|+
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~--~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDY--SWTDIRCPFE---KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTT--EEEECCCCSC---CCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred eEEEEeCCCCCceEEEecCCCC--CEecCCCCCc---ccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 4444443322456777787532 333332 121 11122333456766554331 23579999999999999987
Q ss_pred CCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCceeecCCCCceeecCCcceE
Q 015251 157 SMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEAL 236 (410)
Q Consensus 157 ~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~ 236 (410)
.+..+.....+ .++ -+++.++.... ... ....+++|+..+++|+.++.+|... ....++.
T Consensus 88 ~p~~r~~~~~~--~~~-----~~iyv~GG~~~---~~~---------~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~ 147 (306)
T 3ii7_A 88 PPTPRDSLAAC--AAE-----GKIYTSGGSEV---GNS---------ALYLFECYDTRTESWHTKPSMLTQR-CSHGMVE 147 (306)
T ss_dssp CSSCCBSCEEE--EET-----TEEEEECCBBT---TBS---------CCCCEEEEETTTTEEEEECCCSSCC-BSCEEEE
T ss_pred CCccccceeEE--EEC-----CEEEEECCCCC---CCc---------EeeeEEEEeCCCCceEeCCCCcCCc-ceeEEEE
Confidence 66443222222 222 25666543221 111 1367999999999999998766543 3445678
Q ss_pred ECCeEEEEecCCCCCC----CceEEEEEcCCceeeEEc-CCCCCCCCCcceEEEEeCCeEEEEEeCCC--CeEEEEEEee
Q 015251 237 VKGRLHWVTRPRRYSP----VRGIVSFDIADEQFREVP-KPDCGGLNRCNYHLTVLSGCLSVAVYGNY--GKLEIWVMKD 309 (410)
Q Consensus 237 ~~G~lyw~~~~~~~~~----~~~Il~fDl~~e~~~~i~-lP~~~~~~~~~~~l~~~~G~L~~~~~~~~--~~l~IW~l~~ 309 (410)
++|.+|.+........ ...+..||+.+++|..++ +|.. .....++.++|+|+++...+. ..-++|+++-
T Consensus 148 ~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 148 ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA----RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC----CBSCEEEEETTEEEEECCEETTEEBCCEEEEET
T ss_pred ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch----hhcceEEEECCEEEEEeCCCCCCCCceEEEeeC
Confidence 8999999986532222 567999999999999984 4432 224467788999998864322 1245777764
Q ss_pred CCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------CCEEEEEeCCCCcEEEE
Q 015251 310 YNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------SRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 310 ~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~yd~~~~~~~~v 383 (410)
. ...|...-. +|... ....... -++.|++.-+ ...+..||+++++|+.+
T Consensus 224 ~--~~~W~~~~~----~p~~r-----------------~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 224 K--LNEWKMVSP----MPWKG-----------------VTVKCAA--VGSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp T--TTEEEECCC----CSCCB-----------------SCCEEEE--ETTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred C--CCcEEECCC----CCCCc-----------------cceeEEE--ECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 2 467987532 22110 0111111 2566666532 24689999999999998
Q ss_pred EE
Q 015251 384 VF 385 (410)
Q Consensus 384 ~~ 385 (410)
.-
T Consensus 279 ~~ 280 (306)
T 3ii7_A 279 SK 280 (306)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.17 E-value=1.7e-08 Score=93.81 Aligned_cols=202 Identities=11% Similarity=0.014 Sum_probs=123.9
Q ss_pred ceEEEEeCCCCccccccccCCCCCCCCCeEEEeccCceEEEeecc-----C-----CceEEEEcccccceeeCCCCCCCC
Q 015251 92 NQLCFIDFSDNQDKVRKFNMPFQAKMPEFDAVGSCNGLLCLSDSL-----F-----NDAICIYNPFTRDYIELPKSMQYP 161 (410)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Gll~l~~~~-----~-----~~~~~V~NP~T~~~~~LP~~~~~~ 161 (410)
..+..+|+... .+...+.|... ..........+|.|.+..+. . ...++++||.|++|..+|+.+..+
T Consensus 13 ~~~~~yd~~~~--~W~~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 89 (315)
T 4asc_A 13 EGAVAYDPAAN--ECYCASLSSQV-PKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPR 89 (315)
T ss_dssp TEEEEEETTTT--EEEEEECCCCS-CSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCE
T ss_pred CceEEECCCCC--eEecCCCCCCC-CccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcch
Confidence 46777777533 23222222211 12223344556666444331 1 124899999999999998866433
Q ss_pred CCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeE
Q 015251 162 DQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRL 241 (410)
Q Consensus 162 ~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~l 241 (410)
.....+ .++ -+++.++...... ... ....+++|+..+++|+.++.+|... ....++.++|.+
T Consensus 90 ~~~~~~--~~~-----~~lyv~GG~~~~~-~~~---------~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~i 151 (315)
T 4asc_A 90 CLFGLG--EAL-----NSIYVVGGREIKD-GER---------CLDSVMCYDRLSFKWGESDPLPYVV-YGHTVLSHMDLV 151 (315)
T ss_dssp ESCEEE--EET-----TEEEEECCEESST-TCC---------BCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEE
T ss_pred hceeEE--EEC-----CEEEEEeCCcCCC-CCc---------ccceEEEECCCCCcEeECCCCCCcc-cceeEEEECCEE
Confidence 222222 221 2566664432100 011 1368999999999999998766543 344567899999
Q ss_pred EEEecC-CCCCCCceEEEEEcCCceeeEEc-CCCCCCCCCcceEEEEeCCeEEEEEeCCC--CeEEEEEEeeCCCCCcee
Q 015251 242 HWVTRP-RRYSPVRGIVSFDIADEQFREVP-KPDCGGLNRCNYHLTVLSGCLSVAVYGNY--GKLEIWVMKDYNVKESWA 317 (410)
Q Consensus 242 yw~~~~-~~~~~~~~Il~fDl~~e~~~~i~-lP~~~~~~~~~~~l~~~~G~L~~~~~~~~--~~l~IW~l~~~~~~~~W~ 317 (410)
|.+... ........+..||+.+++|..++ +|.. ......+.++|+|+++..... ..-++|+++-. ...|.
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~ 225 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA----RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSIT--DNKWA 225 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC----CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETT--TTEEE
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc----hhceEEEEECCEEEEEeccCCCCccceEEEEECC--CCeEE
Confidence 999865 22333568999999999999884 4432 223457788999999976432 23478888742 46899
Q ss_pred eEE
Q 015251 318 KEL 320 (410)
Q Consensus 318 ~~~ 320 (410)
..-
T Consensus 226 ~~~ 228 (315)
T 4asc_A 226 PFE 228 (315)
T ss_dssp EEC
T ss_pred ECC
Confidence 864
No 3
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.11 E-value=3.3e-11 Score=80.57 Aligned_cols=45 Identities=31% Similarity=0.533 Sum_probs=39.2
Q ss_pred cCCCCCCCcHHHHHHHHccCCcccccceecccHhhHhhhCChhhh
Q 015251 21 QATGMETLPREIVLHILLRLPITSLVQFKFVCRAWRALAQDPLLA 65 (410)
Q Consensus 21 ~~~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~ 65 (410)
+...+..||+|++.+||++||++++.++++|||+|+.++.++.|-
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 345689999999999999999999999999999999999998764
No 4
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.11 E-value=8.2e-08 Score=89.25 Aligned_cols=240 Identities=8% Similarity=0.087 Sum_probs=142.7
Q ss_pred eEEEEeCCCCccccccccCCCCCCCCCeEEEeccCceEEEeeccC----------CceEEEEcccccceeeCCCCCCCCC
Q 015251 93 QLCFIDFSDNQDKVRKFNMPFQAKMPEFDAVGSCNGLLCLSDSLF----------NDAICIYNPFTRDYIELPKSMQYPD 162 (410)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Gll~l~~~~~----------~~~~~V~NP~T~~~~~LP~~~~~~~ 162 (410)
....+|+... .+...+.+... ......+...+|.|.+-.+.. ...++++||.|++|..+|+.+..+.
T Consensus 25 ~~~~yd~~~~--~W~~~~~~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 101 (318)
T 2woz_A 25 AAVAYDPMEN--ECYLTALAEQI-PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARC 101 (318)
T ss_dssp EEEEEETTTT--EEEEEEECTTS-CSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBC
T ss_pred ceEEECCCCC--ceecccCCccC-CccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccc
Confidence 4566776532 33332222211 112234455667665543310 1238899999999999988665433
Q ss_pred CceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEE
Q 015251 163 QEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLH 242 (410)
Q Consensus 163 ~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~ly 242 (410)
...++ .++ -+++.++..... .... ...+++|+..+++|+.+..+|.... ...++..+|.+|
T Consensus 102 ~~~~~--~~~-----~~iyv~GG~~~~--~~~~---------~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iy 162 (318)
T 2woz_A 102 LFGLG--EVD-----DKIYVVAGKDLQ--TEAS---------LDSVLCYDPVAAKWSEVKNLPIKVY-GHNVISHNGMIY 162 (318)
T ss_dssp SCEEE--EET-----TEEEEEEEEBTT--TCCE---------EEEEEEEETTTTEEEEECCCSSCEE-SCEEEEETTEEE
T ss_pred ccceE--EEC-----CEEEEEcCccCC--CCcc---------cceEEEEeCCCCCEeECCCCCCccc-ccEEEEECCEEE
Confidence 22222 222 256666553311 1111 2579999999999999987765443 345677999999
Q ss_pred EEecCC-CCCCCceEEEEEcCCceeeEEc-CCCCCCCCCcceEEEEeCCeEEEEEeCCCC--eEEEEEEeeCCCCCceee
Q 015251 243 WVTRPR-RYSPVRGIVSFDIADEQFREVP-KPDCGGLNRCNYHLTVLSGCLSVAVYGNYG--KLEIWVMKDYNVKESWAK 318 (410)
Q Consensus 243 w~~~~~-~~~~~~~Il~fDl~~e~~~~i~-lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~--~l~IW~l~~~~~~~~W~~ 318 (410)
.+.... .......+..||+.+++|..++ +|.. .....++.++|+|+++...... .-++|+++-. ...|..
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~ 236 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP----RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLK--TNKWEV 236 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETT--TCCEEE
T ss_pred EEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC----cccceEEEECCEEEEEcCcCCCCccceEEEEECC--CCeEEE
Confidence 997642 1223467999999999999984 3421 1234567889999999754322 3577877642 467988
Q ss_pred EEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec---------------CCEEEEEeCCCCcEEEE
Q 015251 319 ELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK---------------SRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 319 ~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~---------------~~~l~~yd~~~~~~~~v 383 (410)
...+ |... ..... ..-++.|++.-+ ...+..||+++++|+.+
T Consensus 237 ~~~~----p~~r-----------------~~~~~--~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 237 MTEF----PQER-----------------SSISL--VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCCC----SSCC-----------------BSCEE--EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCC----CCcc-----------------cceEE--EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 5422 2110 00111 122456655421 24588999999999998
No 5
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.09 E-value=3.3e-11 Score=109.27 Aligned_cols=51 Identities=29% Similarity=0.550 Sum_probs=47.2
Q ss_pred ccCCCCCCCcHHHHHHHHccCCccccc-ceecccHhhHhhhCChhhhhhhhc
Q 015251 20 QQATGMETLPREIVLHILLRLPITSLV-QFKFVCRAWRALAQDPLLANLHNT 70 (410)
Q Consensus 20 ~~~~~~~~LP~Dll~eIL~rLP~~sl~-r~r~VcK~W~~li~s~~F~~~~~~ 70 (410)
+.+..+..||+||+.+||+|||+++|+ ||++|||+|+++|+++.|.+.++.
T Consensus 46 ~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~ 97 (297)
T 2e31_A 46 EAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQ 97 (297)
T ss_dssp -CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHH
T ss_pred ccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhh
Confidence 345678899999999999999999999 999999999999999999999986
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.06 E-value=6.6e-08 Score=89.01 Aligned_cols=212 Identities=8% Similarity=0.056 Sum_probs=132.2
Q ss_pred EeccCceEEEeecc----CCceEEEEcccccc---eeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcc
Q 015251 123 VGSCNGLLCLSDSL----FNDAICIYNPFTRD---YIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSF 195 (410)
Q Consensus 123 ~~s~~Gll~l~~~~----~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~ 195 (410)
....+|.|.+..+. ..+.++++||.|++ |..+|+.+..+....++ .++ -+++.++.... ..
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~lyv~GG~~~----~~- 125 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT--TLG-----DMIYVSGGFDG----SR- 125 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE--EET-----TEEEEECCBCS----SC-
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE--EEC-----CEEEEEcccCC----Cc-
Confidence 33456666554331 12479999999999 99998866543222222 222 25666543211 11
Q ss_pred ccccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEc-CCCC
Q 015251 196 QRTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVP-KPDC 274 (410)
Q Consensus 196 ~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~-lP~~ 274 (410)
....+++|+..+++|+.++.+|... .....+.++|.+|.+...........+..||+.+++|..++ +|..
T Consensus 126 --------~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 196 (301)
T 2vpj_A 126 --------RHTSMERYDPNIDQWSMLGDMQTAR-EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK 196 (301)
T ss_dssp --------BCCEEEEEETTTTEEEEEEECSSCC-BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC
T ss_pred --------ccceEEEEcCCCCeEEECCCCCCCc-ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc
Confidence 1257999999999999987666433 33456778999999976533333568999999999999984 4432
Q ss_pred CCCCCcceEEEEeCCeEEEEEeCCCC--eEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEE
Q 015251 275 GGLNRCNYHLTVLSGCLSVAVYGNYG--KLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRV 352 (410)
Q Consensus 275 ~~~~~~~~~l~~~~G~L~~~~~~~~~--~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (410)
.....++.++|+|+++...... .-+||.++-. ...|...-.+ |... .....
T Consensus 197 ----r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~----p~~r-----------------~~~~~ 249 (301)
T 2vpj_A 197 ----RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIR--TDSWTTVTSM----TTPR-----------------CYVGA 249 (301)
T ss_dssp ----CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEEECCC----SSCC-----------------BSCEE
T ss_pred ----cccceEEEECCEEEEEeCCCCCcccceEEEEeCC--CCcEEECCCC----CCcc-----------------cceeE
Confidence 1234677889999998754321 3467776642 4679875422 2110 01111
Q ss_pred EEEccCCcEEEEecC------CEEEEEeCCCCcEEEEE
Q 015251 353 VCILEKGEILLEYKS------RVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 353 ~~~~~~g~il~~~~~------~~l~~yd~~~~~~~~v~ 384 (410)
..-++.|++.-+. ..+..||+++++|+.+.
T Consensus 250 --~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 250 --TVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp --EEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred --EEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 1125666665321 46889999999999885
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.06 E-value=4e-08 Score=90.98 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=133.1
Q ss_pred eccCceEEEeecc--------CCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcc
Q 015251 124 GSCNGLLCLSDSL--------FNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSF 195 (410)
Q Consensus 124 ~s~~Gll~l~~~~--------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~ 195 (410)
...+|.|.+-.+. ..+.++++||.|++|..+|+.+..+.....+ .++ -+++.++.... ..
T Consensus 67 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~iyv~GG~~~----~~- 134 (308)
T 1zgk_A 67 CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG--VID-----GHIYAVGGSHG----CI- 134 (308)
T ss_dssp EEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE--EET-----TEEEEECCEET----TE-
T ss_pred EEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE--EEC-----CEEEEEcCCCC----Cc-
Confidence 3446666554332 1246899999999999999866543222222 222 25666543221 10
Q ss_pred ccccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEc-CCCC
Q 015251 196 QRTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVP-KPDC 274 (410)
Q Consensus 196 ~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~-lP~~ 274 (410)
....+++|+..+++|+.+..+|.... ...++.++|.+|.+...........+..||+.+++|..++ +|..
T Consensus 135 --------~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 205 (308)
T 1zgk_A 135 --------HHNSVERYEPERDEWHLVAPMLTRRI-GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI 205 (308)
T ss_dssp --------ECCCEEEEETTTTEEEECCCCSSCCB-SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC
T ss_pred --------ccccEEEECCCCCeEeECCCCCcccc-ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc
Confidence 12579999999999999987665432 3456778999999976533233568999999999999884 3321
Q ss_pred CCCCCcceEEEEeCCeEEEEEeCCC--CeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEE
Q 015251 275 GGLNRCNYHLTVLSGCLSVAVYGNY--GKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRV 352 (410)
Q Consensus 275 ~~~~~~~~~l~~~~G~L~~~~~~~~--~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (410)
.....++.++|+|+++..... ..-++|+++-. ...|.+...+.. |+. ....
T Consensus 206 ----r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~--~r~-------------------~~~~ 258 (308)
T 1zgk_A 206 ----RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVE--TETWTFVAPMKH--RRS-------------------ALGI 258 (308)
T ss_dssp ----CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEECCCCSS--CCB-------------------SCEE
T ss_pred ----cccceEEEECCEEEEEeCCCCCCccceEEEEeCC--CCcEEECCCCCC--Ccc-------------------ceEE
Confidence 123457778999998875422 24567777642 467987542211 110 1111
Q ss_pred EEEccCCcEEEEec------CCEEEEEeCCCCcEEEEEE
Q 015251 353 VCILEKGEILLEYK------SRVLVSYDPKRRTFNEFVF 385 (410)
Q Consensus 353 ~~~~~~g~il~~~~------~~~l~~yd~~~~~~~~v~~ 385 (410)
+. -++.|++.-+ ...+..||+++++|+.+.-
T Consensus 259 ~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 259 TV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp EE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred EE--ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 11 2566666532 2468999999999998854
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.01 E-value=5.8e-08 Score=89.49 Aligned_cols=211 Identities=12% Similarity=0.104 Sum_probs=132.0
Q ss_pred eccCceEEEeecc----CCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccc
Q 015251 124 GSCNGLLCLSDSL----FNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTR 199 (410)
Q Consensus 124 ~s~~Gll~l~~~~----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 199 (410)
...+|.|.+..+. ....++++||.|++|..+|+.+..+....++ .++ -+++.++.... ...
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~iyv~GG~~~----~~~---- 122 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAA--VLN-----GLLYAVGGFDG----STG---- 122 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EET-----TEEEEEEEECS----SCE----
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEE--EEC-----CEEEEEcCCCC----Ccc----
Confidence 3446766554331 1247899999999999999866543322222 222 25666654322 110
Q ss_pred ccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCC--CCceEEEEEcCCceeeEEc-CCCCCC
Q 015251 200 RVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYS--PVRGIVSFDIADEQFREVP-KPDCGG 276 (410)
Q Consensus 200 ~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~--~~~~Il~fDl~~e~~~~i~-lP~~~~ 276 (410)
...+++|+..+++|+.++.+|... .....+.++|.+|.+....... ....+..||+.+++|..++ +|..
T Consensus 123 -----~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-- 194 (302)
T 2xn4_A 123 -----LSSVEAYNIKSNEWFHVAPMNTRR-SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR-- 194 (302)
T ss_dssp -----EEEEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC--
T ss_pred -----CceEEEEeCCCCeEeecCCCCCcc-cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc--
Confidence 257999999999999998766543 3345677899999997652111 1467999999999999883 4422
Q ss_pred CCCcceEEEEeCCeEEEEEeCCC--CeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEE
Q 015251 277 LNRCNYHLTVLSGCLSVAVYGNY--GKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVC 354 (410)
Q Consensus 277 ~~~~~~~l~~~~G~L~~~~~~~~--~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (410)
.....++.++|+|+++...+. ..-++|+++-. ...|.....+.. ++. ....
T Consensus 195 --r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~--~r~-------------------~~~~-- 247 (302)
T 2xn4_A 195 --RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPT--TNAWRQVADMNM--CRR-------------------NAGV-- 247 (302)
T ss_dssp --CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETT--TTEEEEECCCSS--CCB-------------------SCEE--
T ss_pred --cccccEEEECCEEEEECCCCCCcccceEEEEeCC--CCCEeeCCCCCC--ccc-------------------cCeE--
Confidence 123467788999999875432 13467777642 467987542211 110 1111
Q ss_pred EccCCcEEEEec------CCEEEEEeCCCCcEEEEE
Q 015251 355 ILEKGEILLEYK------SRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 355 ~~~~g~il~~~~------~~~l~~yd~~~~~~~~v~ 384 (410)
..-++.|++.-+ ...+..||+++++|+.+.
T Consensus 248 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 248 CAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 112566666532 135899999999999874
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.97 E-value=4.7e-08 Score=90.32 Aligned_cols=196 Identities=13% Similarity=0.103 Sum_probs=125.0
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
...++++||.|++|..+++.+..+.....+ .++ . +++.++... .. ....+++|+..+++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~----~-~lyv~GG~~-----~~---------~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACV--FWD----N-VVYILGGSQ-----LF---------PIKRMDCYNVVKDS 81 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEE--EET----T-EEEEECCBS-----SS---------BCCEEEEEETTTTE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEE--EEC----C-EEEEEeCCC-----CC---------CcceEEEEeCCCCe
Confidence 458999999999999998866543322222 222 2 455553211 00 13689999999999
Q ss_pred eeecCCCCceeecCCcceEECCeEEEEecCC-CCCCCceEEEEEcCCceeeEE-cCCCCCCCCCcceEEEEeCCeEEEEE
Q 015251 218 WRSKGKLAYQFVRRPSEALVKGRLHWVTRPR-RYSPVRGIVSFDIADEQFREV-PKPDCGGLNRCNYHLTVLSGCLSVAV 295 (410)
Q Consensus 218 Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~-~~~~~~~Il~fDl~~e~~~~i-~lP~~~~~~~~~~~l~~~~G~L~~~~ 295 (410)
|+.++.+|... ....++.++|.+|.+.... .......+..||+.+.+|..+ ++|.. .....++.++|+|+++.
T Consensus 82 W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~G 156 (306)
T 3ii7_A 82 WYSKLGPPTPR-DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ----RCSHGMVEANGLIYVCG 156 (306)
T ss_dssp EEEEECCSSCC-BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC----CBSCEEEEETTEEEEEC
T ss_pred EEECCCCCccc-cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC----cceeEEEEECCEEEEEC
Confidence 99998766543 3345667899999998653 233456899999999999988 34432 12345677899999886
Q ss_pred eCC--CC----eEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec---
Q 015251 296 YGN--YG----KLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK--- 366 (410)
Q Consensus 296 ~~~--~~----~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~--- 366 (410)
... .. .-++|+++-. ...|...-. +|... .....+ .-++.|++.-+
T Consensus 157 G~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~----~p~~r-----------------~~~~~~--~~~~~i~v~GG~~~ 211 (306)
T 3ii7_A 157 GSLGNNVSGRVLNSCEVYDPA--TETWTELCP----MIEAR-----------------KNHGLV--FVKDKIFAVGGQNG 211 (306)
T ss_dssp CEESCTTTCEECCCEEEEETT--TTEEEEECC----CSSCC-----------------BSCEEE--EETTEEEEECCEET
T ss_pred CCCCCCCcccccceEEEeCCC--CCeEEECCC----ccchh-----------------hcceEE--EECCEEEEEeCCCC
Confidence 431 11 4567777642 467987642 22110 011111 12556655421
Q ss_pred ---CCEEEEEeCCCCcEEEEE
Q 015251 367 ---SRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 367 ---~~~l~~yd~~~~~~~~v~ 384 (410)
...+..||+++++|+.+.
T Consensus 212 ~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp TEEBCCEEEEETTTTEEEECC
T ss_pred CCCCceEEEeeCCCCcEEECC
Confidence 145899999999999875
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.92 E-value=2e-07 Score=85.83 Aligned_cols=196 Identities=13% Similarity=0.093 Sum_probs=124.5
Q ss_pred ceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc-
Q 015251 139 DAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA- 217 (410)
Q Consensus 139 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~- 217 (410)
..++++||.|++|..+|+.+..+.....+ ..+ -+++.++.... .. ....+++|+..+++
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~l~v~GG~~~----~~---------~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASV--SLH-----DRIYVIGGYDG----RS---------RLSSVECLDYTADED 90 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE--EET-----TEEEEECCBCS----SC---------BCCCEEEEETTCCTT
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEE--EEC-----CEEEEEcCCCC----Cc---------cCceEEEEECCCCCC
Confidence 57899999999999998765433222221 222 25655543211 11 13579999999999
Q ss_pred --eeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEc-CCCCCCCCCcceEEEEeCCeEEEE
Q 015251 218 --WRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVP-KPDCGGLNRCNYHLTVLSGCLSVA 294 (410)
Q Consensus 218 --Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~-lP~~~~~~~~~~~l~~~~G~L~~~ 294 (410)
|+.++.+|... .....+.++|.+|.+...........+..||+.+.+|..++ +|.. ......+.++|+|+++
T Consensus 91 ~~W~~~~~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~ 165 (301)
T 2vpj_A 91 GVWYSVAPMNVRR-GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA----REGAGLVVASGVIYCL 165 (301)
T ss_dssp CCCEEECCCSSCC-BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC----CBSCEEEEETTEEEEE
T ss_pred CeeEECCCCCCCc-cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC----cccceEEEECCEEEEE
Confidence 99998766543 33456778999999986533233468999999999999883 4432 1234567789999988
Q ss_pred EeCCC--CeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------
Q 015251 295 VYGNY--GKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------ 366 (410)
Q Consensus 295 ~~~~~--~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------ 366 (410)
..... ..-++|+++-. ...|...-. +|.... .... ..-++.|++.-+
T Consensus 166 GG~~~~~~~~~~~~~d~~--~~~W~~~~~----~p~~r~-----------------~~~~--~~~~~~i~v~GG~~~~~~ 220 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPH--TGHWTNVTP----MATKRS-----------------GAGV--ALLNDHIYVVGGFDGTAH 220 (301)
T ss_dssp CCBCSSCBCCCEEEEETT--TTEEEEECC----CSSCCB-----------------SCEE--EEETTEEEEECCBCSSSB
T ss_pred CCCCCCcccceEEEEeCC--CCcEEeCCC----CCcccc-----------------cceE--EEECCEEEEEeCCCCCcc
Confidence 65422 23457777642 468987632 221100 1111 112456665532
Q ss_pred CCEEEEEeCCCCcEEEEE
Q 015251 367 SRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 367 ~~~l~~yd~~~~~~~~v~ 384 (410)
...+..||+++++|+.+.
T Consensus 221 ~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 221 LSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CCCEEEEETTTTEEEEEC
T ss_pred cceEEEEeCCCCcEEECC
Confidence 246899999999999885
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.90 E-value=6.5e-08 Score=91.42 Aligned_cols=180 Identities=12% Similarity=-0.015 Sum_probs=109.2
Q ss_pred EeccCceEEEeeccCCceEEEEccc--ccceeeCCCCC-CCCCCceEEEEEEeCCCCCeEEEEEEEEec-CCCCCccccc
Q 015251 123 VGSCNGLLCLSDSLFNDAICIYNPF--TRDYIELPKSM-QYPDQEVVFGFGFHPVSKEYKVIKIVYYRK-SCSNSSFQRT 198 (410)
Q Consensus 123 ~~s~~Gll~l~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~-~~~~~~~~~~ 198 (410)
.+..+|.|.+..+...+.++++||. +++|..+|+.+ ..+....++ .++ =+++.++.... ......
T Consensus 15 ~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~--~~~-----~~lyv~GG~~~~~~~~~~---- 83 (357)
T 2uvk_A 15 GAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSA--FID-----GNLYVFGGIGKNSEGLTQ---- 83 (357)
T ss_dssp EEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEE--EET-----TEEEEECCEEECTTSCEE----
T ss_pred EEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEE--EEC-----CEEEEEcCCCCCCCccce----
Confidence 3444777766554445689999998 49999998866 333222222 222 25666644311 000000
Q ss_pred cccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCC----------------------------
Q 015251 199 RRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRY---------------------------- 250 (410)
Q Consensus 199 ~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~---------------------------- 250 (410)
....+++|+..+++|+.+..++........++..+|.+|.+......
T Consensus 84 -----~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 84 -----VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp -----ECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred -----eeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 13679999999999999987651122233456799999999865211
Q ss_pred ------CCCceEEEEEcCCceeeEE-cCCCCCCCCCcceEEEEeCCeEEEEEeCC---CCeEEEEEEeeCCCCCceeeEE
Q 015251 251 ------SPVRGIVSFDIADEQFREV-PKPDCGGLNRCNYHLTVLSGCLSVAVYGN---YGKLEIWVMKDYNVKESWAKEL 320 (410)
Q Consensus 251 ------~~~~~Il~fDl~~e~~~~i-~lP~~~~~~~~~~~l~~~~G~L~~~~~~~---~~~l~IW~l~~~~~~~~W~~~~ 320 (410)
.....+..||+.+++|..+ ++|... .....++.++|+|+++.... ...-++|.++-......|....
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~ 235 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYG---TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA 235 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCC---CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECC
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCC---cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC
Confidence 1236899999999999988 445321 11246788899999886421 1234677765211246798754
Q ss_pred E
Q 015251 321 N 321 (410)
Q Consensus 321 ~ 321 (410)
.
T Consensus 236 ~ 236 (357)
T 2uvk_A 236 P 236 (357)
T ss_dssp C
T ss_pred C
Confidence 3
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.87 E-value=2.2e-07 Score=85.63 Aligned_cols=196 Identities=11% Similarity=0.098 Sum_probs=123.4
Q ss_pred ceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCce
Q 015251 139 DAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAW 218 (410)
Q Consensus 139 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~W 218 (410)
..+.++||.+++|..+++.+..+....++ .++ -+++.++.... .. ....+++|+..+++|
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~lyv~GG~~~----~~---------~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMV--YMA-----GLVFAVGGFNG----SL---------RVRTVDSYDPVKDQW 89 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEE--EET-----TEEEEESCBCS----SS---------BCCCEEEEETTTTEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEE--EEC-----CEEEEEeCcCC----Cc---------cccceEEECCCCCce
Confidence 47899999999999998765433222222 221 24555533211 11 125789999999999
Q ss_pred eecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEc-CCCCCCCCCcceEEEEeCCeEEEEEeC
Q 015251 219 RSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVP-KPDCGGLNRCNYHLTVLSGCLSVAVYG 297 (410)
Q Consensus 219 r~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~-lP~~~~~~~~~~~l~~~~G~L~~~~~~ 297 (410)
+.++.+|... .....+.++|.+|.+...........+..||+.+.+|..++ +|.. ......+.++|+|+++...
T Consensus 90 ~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~ 164 (302)
T 2xn4_A 90 TSVANMRDRR-STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR----RSSVGVGVVGGLLYAVGGY 164 (302)
T ss_dssp EEECCCSSCC-BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC----CBSCEEEEETTEEEEECCE
T ss_pred eeCCCCCccc-cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc----ccCceEEEECCEEEEEeCC
Confidence 9998766543 23456778999999986532233467999999999999984 3421 1234567789999988643
Q ss_pred CCC----eEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------C
Q 015251 298 NYG----KLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------S 367 (410)
Q Consensus 298 ~~~----~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~ 367 (410)
... .-++|..+-. ...|...-. +|... ..... + .-++.|++.-+ .
T Consensus 165 ~~~~~~~~~~~~~yd~~--~~~W~~~~~----~p~~r-----------------~~~~~-~-~~~~~iyv~GG~~~~~~~ 219 (302)
T 2xn4_A 165 DVASRQCLSTVECYNAT--TNEWTYIAE----MSTRR-----------------SGAGV-G-VLNNLLYAVGGHDGPLVR 219 (302)
T ss_dssp ETTTTEECCCEEEEETT--TTEEEEECC----CSSCC-----------------BSCEE-E-EETTEEEEECCBSSSSBC
T ss_pred CCCCCccccEEEEEeCC--CCcEEECCC----Ccccc-----------------ccccE-E-EECCEEEEECCCCCCccc
Confidence 211 3457777642 467998632 22110 01111 1 12466665532 2
Q ss_pred CEEEEEeCCCCcEEEEE
Q 015251 368 RVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 368 ~~l~~yd~~~~~~~~v~ 384 (410)
..+..||+++++|+.+.
T Consensus 220 ~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 220 KSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp CCEEEEETTTTEEEEEC
T ss_pred ceEEEEeCCCCCEeeCC
Confidence 46899999999999876
No 13
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.86 E-value=1.2e-07 Score=87.79 Aligned_cols=201 Identities=11% Similarity=0.048 Sum_probs=123.5
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
...++++||.|++|..+++.+..+.....+ ..+ -+++.++.......... ....+++|+..+++
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~lyv~GG~~~~~~~~~---------~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGC--VVG-----GLLYAVGGRNNSPDGNT---------DSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEE--EET-----TEEEEECCEEEETTEEE---------ECCCEEEEETTTTE
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEE--EEC-----CEEEEECCCcCCCCCCe---------ecceEEEECCCCCe
Confidence 357899999999999998766543222222 221 24555533210000000 12579999999999
Q ss_pred eeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEE-cCCCCCCCCCcceEEEEeCCeEEEEEe
Q 015251 218 WRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREV-PKPDCGGLNRCNYHLTVLSGCLSVAVY 296 (410)
Q Consensus 218 Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i-~lP~~~~~~~~~~~l~~~~G~L~~~~~ 296 (410)
|+.++.+|... .....+.++|.+|.+...........+..||+.+.+|..+ ++|.. ......+.++|+|+++..
T Consensus 102 W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 102 WSPCAPMSVPR-NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR----RIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp EEECCCCSSCC-BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC----CBSCEEEEETTEEEEECC
T ss_pred EeECCCCCcCc-cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc----ccceEEEEECCEEEEEeC
Confidence 99998766543 3345677899999997642222235799999999999988 44432 123456778999999875
Q ss_pred CCC--CeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------CC
Q 015251 297 GNY--GKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------SR 368 (410)
Q Consensus 297 ~~~--~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~ 368 (410)
... ..-++|.++-. ...|...-. +|... .....+. -++.|++.-+ ..
T Consensus 177 ~~~~~~~~~~~~yd~~--~~~W~~~~~----~p~~r-----------------~~~~~~~--~~~~iyv~GG~~~~~~~~ 231 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPE--RNEWRMITA----MNTIR-----------------SGAGVCV--LHNCIYAAGGYDGQDQLN 231 (308)
T ss_dssp BCSSCBCCCEEEEETT--TTEEEECCC----CSSCC-----------------BSCEEEE--ETTEEEEECCBCSSSBCC
T ss_pred CCCCCcCceEEEEeCC--CCeEeeCCC----CCCcc-----------------ccceEEE--ECCEEEEEeCCCCCCccc
Confidence 422 13456776642 467987532 22110 0111111 2566665532 24
Q ss_pred EEEEEeCCCCcEEEEE
Q 015251 369 VLVSYDPKRRTFNEFV 384 (410)
Q Consensus 369 ~l~~yd~~~~~~~~v~ 384 (410)
.+..||+++++|+.+.
T Consensus 232 ~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 232 SVERYDVETETWTFVA 247 (308)
T ss_dssp CEEEEETTTTEEEECC
T ss_pred eEEEEeCCCCcEEECC
Confidence 6899999999999875
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.63 E-value=2.1e-06 Score=79.57 Aligned_cols=171 Identities=13% Similarity=0.123 Sum_probs=112.1
Q ss_pred EeccCceEEEeecc-------CCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcc
Q 015251 123 VGSCNGLLCLSDSL-------FNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSF 195 (410)
Q Consensus 123 ~~s~~Gll~l~~~~-------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~ 195 (410)
....+|.|.+..+. ..+.++++||.|++|..+++.+..+....++ .++ -+++.++.... ...
T Consensus 94 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~iyv~GG~~~---~~~- 162 (315)
T 4asc_A 94 LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL--SHM-----DLVYVIGGKGS---DRK- 162 (315)
T ss_dssp EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EET-----TEEEEECCBCT---TSC-
T ss_pred EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE--EEC-----CEEEEEeCCCC---CCc-
Confidence 34457776554331 1257999999999999998866543222222 232 25666643211 111
Q ss_pred ccccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEc-CCCC
Q 015251 196 QRTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVP-KPDC 274 (410)
Q Consensus 196 ~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~-lP~~ 274 (410)
....+++|+..+++|+.++.+|... ....++.++|.+|.+...........+.+||+.+++|..++ +|..
T Consensus 163 --------~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 233 (315)
T 4asc_A 163 --------CLNKMCVYDPKKFEWKELAPMQTAR-SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE 233 (315)
T ss_dssp --------BCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSC
T ss_pred --------ccceEEEEeCCCCeEEECCCCCCch-hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCc
Confidence 1368999999999999998766543 34456788999999986532223468999999999999984 3321
Q ss_pred CCCCCcceEEEEeCCeEEEEEeCC-----------CCeEEEEEEeeCCCCCceeeE
Q 015251 275 GGLNRCNYHLTVLSGCLSVAVYGN-----------YGKLEIWVMKDYNVKESWAKE 319 (410)
Q Consensus 275 ~~~~~~~~~l~~~~G~L~~~~~~~-----------~~~l~IW~l~~~~~~~~W~~~ 319 (410)
.....++.++|+|+++...+ ...-+||+.+-. ...|++.
T Consensus 234 ----r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~ 283 (315)
T 4asc_A 234 ----RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEE--EKKWEGV 283 (315)
T ss_dssp ----CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT--TTEEEEE
T ss_pred ----ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCC--CChhhhh
Confidence 12346788899999987532 123578888752 4689987
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.61 E-value=5.7e-06 Score=77.91 Aligned_cols=257 Identities=11% Similarity=0.065 Sum_probs=135.2
Q ss_pred ceEEEEeCCCCcccccccc-CCCCCCCCCeEEEeccCceEEEeecc---------CCceEEEEcccccceeeCCCCC-CC
Q 015251 92 NQLCFIDFSDNQDKVRKFN-MPFQAKMPEFDAVGSCNGLLCLSDSL---------FNDAICIYNPFTRDYIELPKSM-QY 160 (410)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~Gll~l~~~~---------~~~~~~V~NP~T~~~~~LP~~~-~~ 160 (410)
..++.+|+......|..++ .|..+ ......+..+|.|.+..+. ..+.++++||.|++|..+++.+ ..
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~~~--R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~ 108 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPGGP--RDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMG 108 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTTCC--CBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSC
T ss_pred CeEEEEccccCCCCeeECCCCCCCc--CccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcc
Confidence 4677778753222343332 12111 1122334456766554332 1246899999999999998755 32
Q ss_pred CCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCc---------------------cccccccccCCceEEEEEeCCCcee
Q 015251 161 PDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSS---------------------FQRTRRVIYPRSDVQVYTVGSPAWR 219 (410)
Q Consensus 161 ~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~Vyss~t~~Wr 219 (410)
+. ... +..++ =+++.++.......++. +............+++|+..+++|+
T Consensus 109 r~-~~~-~~~~~-----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 181 (357)
T 2uvk_A 109 MA-GHV-TFVHN-----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS 181 (357)
T ss_dssp CS-SEE-EEEET-----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE
T ss_pred cc-cce-EEEEC-----CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEE
Confidence 22 221 12232 25666643211000000 0000000001258999999999999
Q ss_pred ecCCCCceeecCCcceEECCeEEEEecCCC-CCCCceEEEEEc--CCceeeEE-cCCCCCCCCCcceEEEEeCCeEEEEE
Q 015251 220 SKGKLAYQFVRRPSEALVKGRLHWVTRPRR-YSPVRGIVSFDI--ADEQFREV-PKPDCGGLNRCNYHLTVLSGCLSVAV 295 (410)
Q Consensus 220 ~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~-~~~~~~Il~fDl--~~e~~~~i-~lP~~~~~~~~~~~l~~~~G~L~~~~ 295 (410)
.+..+|.........+.++|.+|.+..... ......+..||+ .+.+|..+ ++|.... .....++..+|+|+++.
T Consensus 182 ~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~iyv~G 259 (357)
T 2uvk_A 182 YAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG--VAGGFAGISNDSLIFAG 259 (357)
T ss_dssp EEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC--CBSCEEEEETTEEEEEC
T ss_pred ECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc--cccceEEEECCEEEEEc
Confidence 997766543333567788999999975421 112356888887 88999987 3432211 12345788999999886
Q ss_pred eCC-------------------CCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEc
Q 015251 296 YGN-------------------YGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCIL 356 (410)
Q Consensus 296 ~~~-------------------~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (410)
... ....++|+++-. ...|.+.-.+.. |+. ... ++.
T Consensus 260 G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~--~r~-------------------~~~--~~~ 314 (357)
T 2uvk_A 260 GAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQ--GRA-------------------YGV--SLP 314 (357)
T ss_dssp CEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSS--CCB-------------------SSE--EEE
T ss_pred CccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCC--Ccc-------------------cce--eEE
Confidence 521 112466776642 467998654322 110 011 122
Q ss_pred cCCcEEEEec---C----CEEEEEeCCCCcEEEEE
Q 015251 357 EKGEILLEYK---S----RVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 357 ~~g~il~~~~---~----~~l~~yd~~~~~~~~v~ 384 (410)
-++.|++.-+ . ..+..++++++++.+..
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 3566665422 1 35788999999987653
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.56 E-value=0.00013 Score=70.60 Aligned_cols=50 Identities=36% Similarity=0.464 Sum_probs=44.9
Q ss_pred ccCCCCCCCcHHHHHHHHccCCcccccceecccHhhHhhhCChhhhhhhh
Q 015251 20 QQATGMETLPREIVLHILLRLPITSLVQFKFVCRAWRALAQDPLLANLHN 69 (410)
Q Consensus 20 ~~~~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~~~~~ 69 (410)
.....+..||+|++..||++|++++|+++.+|||+|+.++.++.+-+...
T Consensus 14 ~~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~ 63 (445)
T 2ovr_B 14 FQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKC 63 (445)
T ss_dssp CCCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHH
T ss_pred ccCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhe
Confidence 34567889999999999999999999999999999999999988776655
No 17
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.53 E-value=0.00013 Score=70.66 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=37.7
Q ss_pred CCCCCCcHHHHHHHHccCCcccccceecccHhhHhhhCC-hh
Q 015251 23 TGMETLPREIVLHILLRLPITSLVQFKFVCRAWRALAQD-PL 63 (410)
Q Consensus 23 ~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s-~~ 63 (410)
..+..||+|++.+||+.||+++|+++..|||+|+.++.+ +.
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~ 54 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTS 54 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHH
Confidence 456789999999999999999999999999999999988 54
No 18
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.51 E-value=2.7e-06 Score=78.89 Aligned_cols=171 Identities=15% Similarity=0.192 Sum_probs=109.9
Q ss_pred EeccCceEEEeeccC------CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccc
Q 015251 123 VGSCNGLLCLSDSLF------NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQ 196 (410)
Q Consensus 123 ~~s~~Gll~l~~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~ 196 (410)
.+..+|-|.+..+.. ...++++||.|.+|..+++.+..+....++ .++ -+++.++.... ...
T Consensus 105 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~-----~~iyv~GG~~~---~~~-- 172 (318)
T 2woz_A 105 LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVI--SHN-----GMIYCLGGKTD---DKK-- 172 (318)
T ss_dssp EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEE--EET-----TEEEEECCEES---SSC--
T ss_pred eEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEE--EEC-----CEEEEEcCCCC---CCC--
Confidence 344567665543321 146899999999999998755432221211 222 25666643321 111
Q ss_pred cccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEc-CCCCC
Q 015251 197 RTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVP-KPDCG 275 (410)
Q Consensus 197 ~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~-lP~~~ 275 (410)
....+++|+..+++|+.++.+|... ....++.++|.+|.+...........+..||+.+++|..++ +|..
T Consensus 173 -------~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~- 243 (318)
T 2woz_A 173 -------CTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQE- 243 (318)
T ss_dssp -------BCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSC-
T ss_pred -------ccceEEEEcCCCCEEEECCCCCCCc-ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCc-
Confidence 1257999999999999998766443 23456788999999976522222357899999999999884 4432
Q ss_pred CCCCcceEEEEeCCeEEEEEeCCC-----------CeEEEEEEeeCCCCCceeeE
Q 015251 276 GLNRCNYHLTVLSGCLSVAVYGNY-----------GKLEIWVMKDYNVKESWAKE 319 (410)
Q Consensus 276 ~~~~~~~~l~~~~G~L~~~~~~~~-----------~~l~IW~l~~~~~~~~W~~~ 319 (410)
.....++.++|+|+++..... ..-+||+.+-. +..|.+.
T Consensus 244 ---r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~ 293 (318)
T 2woz_A 244 ---RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD--KKEWAGM 293 (318)
T ss_dssp ---CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETT--TTEEEEE
T ss_pred ---ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCC--CCEehhh
Confidence 123467888999998865321 23578888752 4689987
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.48 E-value=7.2e-06 Score=84.55 Aligned_cols=212 Identities=10% Similarity=0.027 Sum_probs=123.6
Q ss_pred cCceEEEeecc---CCceEEEEcccccceeeCC-C-----CCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccc
Q 015251 126 CNGLLCLSDSL---FNDAICIYNPFTRDYIELP-K-----SMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQ 196 (410)
Q Consensus 126 ~~Gll~l~~~~---~~~~~~V~NP~T~~~~~LP-~-----~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~ 196 (410)
.+|.|.+..+. ..+.++++||.|++|..++ + .+..+.....+ .+.. +-+++.++.... .+.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~--~~~~---~~~lyv~GG~~~---~~~-- 465 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFT--TISR---NNQLLLIGGRKA---PHQ-- 465 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEE--EETT---TTEEEEECCBSS---TTC--
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEE--EEcc---CCEEEEEcCCCC---CCC--
Confidence 56666554432 2357999999999999987 4 22222111221 2210 124666643211 110
Q ss_pred cccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEE-CCeEEEEecCCCCCCCceEEEEEcCCceeeEEc----C
Q 015251 197 RTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV-KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVP----K 271 (410)
Q Consensus 197 ~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~----l 271 (410)
....+++|+..+++|+.++.+|.... ...++.+ +|.+|.+....... .+..||+.+++|..++ +
T Consensus 466 -------~~~dv~~yd~~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~ 534 (695)
T 2zwa_A 466 -------GLSDNWIFDMKTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEF 534 (695)
T ss_dssp -------BCCCCEEEETTTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGG
T ss_pred -------ccccEEEEeCCCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCC
Confidence 12579999999999999987765432 3345554 99999998762211 8999999999999886 3
Q ss_pred CCCCCCCCcceEEEEeC---CeEEEEEeCCC----CeEEEEEEeeCCCCCc------eeeEEEeccCcCcccccccCCcc
Q 015251 272 PDCGGLNRCNYHLTVLS---GCLSVAVYGNY----GKLEIWVMKDYNVKES------WAKELNIGAYIPKGLKQSLDRPL 338 (410)
Q Consensus 272 P~~~~~~~~~~~l~~~~---G~L~~~~~~~~----~~l~IW~l~~~~~~~~------W~~~~~i~~~~p~~~~~~~~~~~ 338 (410)
|... .....++++ |+|+++..... ..-++|..+-. ... |........ .++
T Consensus 535 p~~r----~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~-~~R---------- 597 (695)
T 2zwa_A 535 FQNS----LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPL-FQR---------- 597 (695)
T ss_dssp GGSC----CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGG-GCC----------
T ss_pred CCcc----cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCC-CCc----------
Confidence 4321 122334445 88988875421 23466766642 234 776554211 111
Q ss_pred hhhcccCCCceeEEEEEccCCcEEEEec---------CCEEEEEeCCCCcEEEEEE
Q 015251 339 KIWKNSLNGRVVRVVCILEKGEILLEYK---------SRVLVSYDPKRRTFNEFVF 385 (410)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~g~il~~~~---------~~~l~~yd~~~~~~~~v~~ 385 (410)
...-..+.+++.|++.-+ ...+..||+++++|+.+.+
T Consensus 598 ----------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 598 ----------YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp ----------BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred ----------ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 111122333366666532 2458999999999996554
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.30 E-value=9.8e-05 Score=71.23 Aligned_cols=42 Identities=31% Similarity=0.534 Sum_probs=37.7
Q ss_pred CCCCCCcHH----HHHHHHccCCcccccceecccHhhHhhhCChhh
Q 015251 23 TGMETLPRE----IVLHILLRLPITSLVQFKFVCRAWRALAQDPLL 64 (410)
Q Consensus 23 ~~~~~LP~D----ll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F 64 (410)
..+..||+| |+..||++|++++|+++.+|||+|+.++.++.+
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~ 54 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGML 54 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTH
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHH
Confidence 456779999 999999999999999999999999999987643
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.06 E-value=5.4e-05 Score=77.50 Aligned_cols=108 Identities=10% Similarity=0.092 Sum_probs=71.5
Q ss_pred eEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCcee
Q 015251 140 AICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAWR 219 (410)
Q Consensus 140 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~Wr 219 (410)
.+.++||.|++|..++..+..+.. ...+.++.. +-+++.++... ...+++|+..+++|.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~-~~~~~~~~~---~g~lyv~GG~~-----------------~~~v~~yd~~t~~W~ 278 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDM-FCPGISMDG---NGQIVVTGGND-----------------AKKTSLYDSSSDSWI 278 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCC-SSCEEEECT---TSCEEEECSSS-----------------TTCEEEEEGGGTEEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCC-ccccccCCC---CCCEEEeCCCC-----------------CCceEEecCcCCcee
Confidence 688999999999998765433221 111222211 12455553211 147999999999999
Q ss_pred ecCCCCceeecCCcceEE-CCeEEEEecC-CCCCCCceEEEEEcCCceeeEE
Q 015251 220 SKGKLAYQFVRRPSEALV-KGRLHWVTRP-RRYSPVRGIVSFDIADEQFREV 269 (410)
Q Consensus 220 ~~~~~p~~~~~~~~~v~~-~G~lyw~~~~-~~~~~~~~Il~fDl~~e~~~~i 269 (410)
.+..++.... ...++.+ +|.+|.+... ........+..||+.+++|..+
T Consensus 279 ~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 279 PGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp ECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred ECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 9987665432 2344566 9999999873 2222346799999999999987
No 22
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.87 E-value=2.4e-06 Score=76.60 Aligned_cols=49 Identities=27% Similarity=0.361 Sum_probs=44.4
Q ss_pred CCCCCCCcHHHHHHHHccCCcccccceecccHhhHhhhCChhhhhhhhc
Q 015251 22 ATGMETLPREIVLHILLRLPITSLVQFKFVCRAWRALAQDPLLANLHNT 70 (410)
Q Consensus 22 ~~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~~~~~~ 70 (410)
++.+..||+|++..||+.|++++|+|+.+|||.||.++.++..=+.++.
T Consensus 2 ~~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~ 50 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLL 50 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHH
T ss_pred cchhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHh
Confidence 3457889999999999999999999999999999999999987777765
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.61 E-value=0.0013 Score=67.77 Aligned_cols=154 Identities=7% Similarity=-0.007 Sum_probs=97.9
Q ss_pred ceEEEEEeCCCceeecC-CC-----CceeecCCcceEE--CCeEEEEecCCCCC-CCceEEEEEcCCceeeEE-cCCCCC
Q 015251 206 SDVQVYTVGSPAWRSKG-KL-----AYQFVRRPSEALV--KGRLHWVTRPRRYS-PVRGIVSFDIADEQFREV-PKPDCG 275 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~-~~-----p~~~~~~~~~v~~--~G~lyw~~~~~~~~-~~~~Il~fDl~~e~~~~i-~lP~~~ 275 (410)
..+++|+..+++|..+. .+ |.. ......+.+ +|.+|.+....... ....+..||+.+.+|..+ ++|..
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~-R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~- 489 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVA-RMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT- 489 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCC-CBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCcc-ccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-
Confidence 57999999999999887 42 222 234556778 99999998763222 245799999999999988 34431
Q ss_pred CCCCcceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEE
Q 015251 276 GLNRCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVC 354 (410)
Q Consensus 276 ~~~~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (410)
......+.+ +|+|+++....... ++|+.+-. ...|.......- +|... .....+.
T Consensus 490 ---R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~--t~~W~~~~~~g~-~p~~r-----------------~~~~a~v 545 (695)
T 2zwa_A 490 ---RFRHSACSLPDGNVLILGGVTEGP-AMLLYNVT--EEIFKDVTPKDE-FFQNS-----------------LVSAGLE 545 (695)
T ss_dssp ---CBSCEEEECTTSCEEEECCBCSSC-SEEEEETT--TTEEEECCCSSG-GGGSC-----------------CBSCEEE
T ss_pred ---cccceEEEEcCCEEEEECCCCCCC-CEEEEECC--CCceEEccCCCC-CCCcc-----------------cceeEEE
Confidence 123456665 99999987654444 88888752 467987543211 12110 0111122
Q ss_pred EccC-CcEEEEec--------CCEEEEEeCCCCc------EEEEEE
Q 015251 355 ILEK-GEILLEYK--------SRVLVSYDPKRRT------FNEFVF 385 (410)
Q Consensus 355 ~~~~-g~il~~~~--------~~~l~~yd~~~~~------~~~v~~ 385 (410)
+..+ +.|++.-+ ...+..||+++++ |+.+.-
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 2222 55665432 1468999999999 887765
No 24
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.57 E-value=2.2e-05 Score=73.11 Aligned_cols=45 Identities=31% Similarity=0.533 Sum_probs=39.6
Q ss_pred cCCCCCCCcHHHHHHHHccCCcccccceecccHhhHhhhCChhhh
Q 015251 21 QATGMETLPREIVLHILLRLPITSLVQFKFVCRAWRALAQDPLLA 65 (410)
Q Consensus 21 ~~~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~s~~F~ 65 (410)
....+..||+|++.+||.+|+.+++.+++.|||+|+.++.++...
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 356689999999999999999999999999999999999877643
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.84 E-value=0.0042 Score=63.42 Aligned_cols=145 Identities=14% Similarity=0.119 Sum_probs=85.5
Q ss_pred EEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCC------CCCceEEEEEcCCceeeEEc-CCCCCCCCC
Q 015251 209 QVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRY------SPVRGIVSFDIADEQFREVP-KPDCGGLNR 279 (410)
Q Consensus 209 ~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~------~~~~~Il~fDl~~e~~~~i~-lP~~~~~~~ 279 (410)
+.|+..+++|..+..+|.. ...++++ +|.+|.+...... .....+..||+.+.+|..++ +|... ...
T Consensus 169 ~~~dp~~~~W~~~~~~P~~---~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~-~~~ 244 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDLPIV---PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH-DMF 244 (656)
T ss_dssp CCCCTTSCEEEEEEECSSC---CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC-CCS
T ss_pred ccCCCCCCeeeeeccCCCC---ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC-CCc
Confidence 3455567899987766652 1233445 9999999754211 11246899999999998763 33211 111
Q ss_pred cceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCC
Q 015251 280 CNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKG 359 (410)
Q Consensus 280 ~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 359 (410)
.....+..+|+|+++...... ++|+.+-. ...|.+.-. ||.. +...-.++..+|
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~--~v~~yd~~--t~~W~~~~~----~~~~------------------R~~~s~~~~~dg 298 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAK--KTSLYDSS--SDSWIPGPD----MQVA------------------RGYQSSATMSDG 298 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTT--CEEEEEGG--GTEEEECCC----CSSC------------------CSSCEEEECTTS
T ss_pred cccccCCCCCCEEEeCCCCCC--ceEEecCc--CCceeECCC----CCcc------------------ccccceEEecCC
Confidence 111233468999988765444 45555532 357987532 2210 011122334467
Q ss_pred cEEEEec--C-----CEEEEEeCCCCcEEEE
Q 015251 360 EILLEYK--S-----RVLVSYDPKRRTFNEF 383 (410)
Q Consensus 360 ~il~~~~--~-----~~l~~yd~~~~~~~~v 383 (410)
+|++.-+ + ..+..||+++++|+.+
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred eEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 7776543 1 3588999999999987
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.84 E-value=0.00028 Score=70.96 Aligned_cols=36 Identities=17% Similarity=0.428 Sum_probs=29.6
Q ss_pred CCCCCCcHHHHHHHHccCC-cccccceecccHhhHhh
Q 015251 23 TGMETLPREIVLHILLRLP-ITSLVQFKFVCRAWRAL 58 (410)
Q Consensus 23 ~~~~~LP~Dll~eIL~rLP-~~sl~r~r~VcK~W~~l 58 (410)
..++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4588999999999999999 99999999999999998
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.30 E-value=0.001 Score=66.81 Aligned_cols=35 Identities=11% Similarity=0.302 Sum_probs=32.5
Q ss_pred CCCCcHHHHHHHHccC-CcccccceecccHhhHhhh
Q 015251 25 METLPREIVLHILLRL-PITSLVQFKFVCRAWRALA 59 (410)
Q Consensus 25 ~~~LP~Dll~eIL~rL-P~~sl~r~r~VcK~W~~li 59 (410)
...||||++.+||++| |.+++.+++.|||+|+.+.
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 4679999999999999 8999999999999999883
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.78 E-value=6.1 Score=34.38 Aligned_cols=193 Identities=10% Similarity=-0.028 Sum_probs=96.4
Q ss_pred EEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccc
Q 015251 122 AVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRV 201 (410)
Q Consensus 122 ~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 201 (410)
+.-..+|.|.+... ....++++|| +++...+..+.. .....++.+|+.. ++... . ..
T Consensus 104 i~~~~~g~l~v~~~-~~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~~g---~l~v~-~-~~------------- 160 (299)
T 2z2n_A 104 ITEGPNGDIWFTEM-NGNRIGRITD-DGKIREYELPNK---GSYPSFITLGSDN---ALWFT-E-NQ------------- 160 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTS---CEEEE-E-TT-------------
T ss_pred eEECCCCCEEEEec-CCceEEEECC-CCCEEEecCCCC---CCCCceEEEcCCC---CEEEE-e-CC-------------
Confidence 43445777766543 2468999999 776665432211 1234567777643 22221 1 00
Q ss_pred ccCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCC
Q 015251 202 IYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNR 279 (410)
Q Consensus 202 ~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~ 279 (410)
...+.+|+. +++......... . ....++.+ +|.+|+.... .+.|..||. +.++..+.+|... .
T Consensus 161 ---~~~i~~~~~-~g~~~~~~~~~~-~-~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~ 225 (299)
T 2z2n_A 161 ---NNAIGRITE-SGDITEFKIPTP-A-SGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKIPTPN---A 225 (299)
T ss_dssp ---TTEEEEECT-TCCEEEEECSST-T-CCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTT---C
T ss_pred ---CCEEEEEcC-CCcEEEeeCCCC-C-CcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEECCCCC---C
Confidence 145666776 666554311100 0 01112333 5787665543 368999999 7777766665311 1
Q ss_pred cceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccC
Q 015251 280 CNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEK 358 (410)
Q Consensus 280 ~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (410)
....+..- +|.|.+.... ...+.+|-. .+ . ...+.. +.. .....-+.+ .+
T Consensus 226 ~~~~i~~~~~g~l~v~~~~-~~~i~~~d~--~g---~---~~~~~~--~~~-----------------~~~~~~i~~-~~ 276 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWG-ANKIGRLTS--NN---I---IEEYPI--QIK-----------------SAEPHGICF-DG 276 (299)
T ss_dssp CEEEEEECSTTCEEEEETT-TTEEEEEET--TT---E---EEEEEC--SSS-----------------SCCEEEEEE-CS
T ss_pred CceeEEECCCCCEEEeccC-CceEEEECC--CC---c---eEEEeC--CCC-----------------CCccceEEe-cC
Confidence 12233332 5776655432 344544432 11 1 112211 110 012334455 78
Q ss_pred CcEEEEecCCEEEEEeCCCCcEE
Q 015251 359 GEILLEYKSRVLVSYDPKRRTFN 381 (410)
Q Consensus 359 g~il~~~~~~~l~~yd~~~~~~~ 381 (410)
|.+++....+++..||+++++++
T Consensus 277 g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 277 ETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp SCEEEEETTTEEEEEEEC-----
T ss_pred CCEEEEecCCcEEEEEcCcccCC
Confidence 89988876788999999988764
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=88.87 E-value=8.3 Score=35.29 Aligned_cols=116 Identities=13% Similarity=0.134 Sum_probs=63.9
Q ss_pred CcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeE-EcCCCCCC-----CCCcceEEEEeCCeEEEEEeCCCCeEEEE
Q 015251 232 PSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFRE-VPKPDCGG-----LNRCNYHLTVLSGCLSVAVYGNYGKLEIW 305 (410)
Q Consensus 232 ~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~-i~lP~~~~-----~~~~~~~l~~~~G~L~~~~~~~~~~l~IW 305 (410)
..++..+|.+|..... +.|.+||.++.+... .+++.... ........+..+|.+++... .. .|.
T Consensus 47 ~~p~v~~~~v~~~~~~------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--~g--~l~ 116 (376)
T 3q7m_A 47 LHPALADNVVYAADRA------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--KA--QVY 116 (376)
T ss_dssp CCCEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--TS--EEE
T ss_pred eccEEECCEEEEEcCC------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--CC--EEE
Confidence 3567889999987755 689999997655332 34432110 11112345556777766542 22 344
Q ss_pred EEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEecCCEEEEEeCCCCcEEEE
Q 015251 306 VMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYKSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 306 ~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~~~~~~~v 383 (410)
.++....+..|.... .-. . ...|+. .++.+++...++.++.||.++++...-
T Consensus 117 a~d~~tG~~~W~~~~--~~~----~------------------~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 117 ALNTSDGTVAWQTKV--AGE----A------------------LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EEETTTCCEEEEEEC--SSC----C------------------CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEECCCCCEEEEEeC--CCc----e------------------EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 555322256775532 110 0 001111 246666667778899999988876543
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=88.65 E-value=13 Score=33.37 Aligned_cols=195 Identities=9% Similarity=0.016 Sum_probs=100.9
Q ss_pred CceEEEeec---cCCceEEEEcccccceee-CCCC-CCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccc
Q 015251 127 NGLLCLSDS---LFNDAICIYNPFTRDYIE-LPKS-MQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRV 201 (410)
Q Consensus 127 ~Gll~l~~~---~~~~~~~V~NP~T~~~~~-LP~~-~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 201 (410)
+|++.+..+ .....+.++||.|++... ++.. ....-.....++.++. .. +..... .
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~---~~-lyv~~~--~------------- 62 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD---GI-GWIVVN--N------------- 62 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET---TE-EEEEEG--G-------------
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC---CE-EEEEEc--C-------------
Confidence 455555432 124689999999998754 2110 0001112223444443 22 322211 1
Q ss_pred ccCCceEEEEEeCCCce-eecCC--CCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceee-EEcCCCCCCC
Q 015251 202 IYPRSDVQVYTVGSPAW-RSKGK--LAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFR-EVPKPDCGGL 277 (410)
Q Consensus 202 ~~~~~~~~Vyss~t~~W-r~~~~--~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i~lP~~~~~ 277 (410)
...+.|++..+++- +.+.. .|..+ .+.-+|.+|..... .+.|..+|+.+.+.. .++++.....
T Consensus 63 ---~~~v~viD~~t~~~~~~i~~~~~p~~i-----~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 63 ---SHVIFAIDINTFKEVGRITGFTSPRYI-----HFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp ---GTEEEEEETTTCCEEEEEECCSSEEEE-----EEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred ---CCEEEEEECcccEEEEEcCCCCCCcEE-----EEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCcccc
Confidence 15788899888754 23321 12211 12257888877733 378999999988764 5666541111
Q ss_pred CCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccC-cCcccccccCCcchhhcccCCCceeEEEEEc
Q 015251 278 NRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAY-IPKGLKQSLDRPLKIWKNSLNGRVVRVVCIL 356 (410)
Q Consensus 278 ~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (410)
......++.-+|+|++........+.++-++. ..... +|... .|. -+.+.
T Consensus 130 ~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t----~~~~~--~i~~g~~p~-----------------------~i~~~ 180 (328)
T 3dsm_A 130 SGSTEQMVQYGKYVYVNCWSYQNRILKIDTET----DKVVD--ELTIGIQPT-----------------------SLVMD 180 (328)
T ss_dssp TCBCCCEEEETTEEEEEECTTCCEEEEEETTT----TEEEE--EEECSSCBC-----------------------CCEEC
T ss_pred CCCcceEEEECCEEEEEcCCCCCEEEEEECCC----CeEEE--EEEcCCCcc-----------------------ceEEc
Confidence 11122344467788776542234455443322 22222 33320 111 12445
Q ss_pred cCCcEEEEecC-----------CEEEEEeCCCCcEEE
Q 015251 357 EKGEILLEYKS-----------RVLVSYDPKRRTFNE 382 (410)
Q Consensus 357 ~~g~il~~~~~-----------~~l~~yd~~~~~~~~ 382 (410)
.+|++++.... ..+..+|++++++..
T Consensus 181 ~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 181 KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 67887776432 579999999988764
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=84.92 E-value=28 Score=35.53 Aligned_cols=140 Identities=11% Similarity=0.071 Sum_probs=70.2
Q ss_pred ceEEEEEeCCCceeecCCCCceeecCCcceEE--C--CeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCc
Q 015251 206 SDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--K--GRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRC 280 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~--G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~ 280 (410)
..+.+++..++.|..+....... ..-.++.+ + |.+...+.. .+.|..+|+.+..- ..+.+.... ..
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~~l~sgs~-----dg~I~vwdl~~~~~~~~~~~~~~~---~~ 147 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPIIIDAHA---IG 147 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCSSSCCCCEEEECCS---SC
T ss_pred CeEEEEECCCCcccccccccCCC-CCeEEEEECCCCCCCEEEEEeC-----CCcEEEEEeecCCCcceeEeecCC---Cc
Confidence 57889999998876554221100 00011112 1 333333332 26788888876521 111111100 00
Q ss_pred ceEEEEe--------------CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCC
Q 015251 281 NYHLTVL--------------SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLN 346 (410)
Q Consensus 281 ~~~l~~~--------------~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~ 346 (410)
...+... +|.+.+++. .+..+.||-+... ...+.....+...
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs-~dg~I~iwd~~~~--~~~~~~~~~~~~h--------------------- 203 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSD--AQTYVLESTLEGH--------------------- 203 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEE-TTSCEEEEEEETT--TTEEEEEEEECCC---------------------
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEE-CCCeEEEEeccCC--cccceeeeeecCC---------------------
Confidence 1111111 355555554 3678999998753 3445555544321
Q ss_pred CceeEEEEEccC---CcEEEE-ecCCEEEEEeCCCC
Q 015251 347 GRVVRVVCILEK---GEILLE-YKSRVLVSYDPKRR 378 (410)
Q Consensus 347 ~~~~~~~~~~~~---g~il~~-~~~~~l~~yd~~~~ 378 (410)
...+.-+++..+ |.+++. ..++.+..||..++
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 013445566556 666654 44567888888775
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=83.21 E-value=25 Score=32.82 Aligned_cols=186 Identities=12% Similarity=0.146 Sum_probs=86.8
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
.+.+.|||..+++...+-... .....+.++.|.|..+.+-+ .. .. ...+.+++.+++.
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~--gH~~~V~~l~f~p~~~~~l~-s~---s~----------------D~~v~iwd~~~~~ 198 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGI--GAGGSITGLKFNPLNTNQFY-AS---SM----------------EGTTRLQDFKGNI 198 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCC--SSSCCCCEEEECSSCTTEEE-EE---CS----------------SSCEEEEETTSCE
T ss_pred CCEEEEEECCCCCceeEEEcc--CCCCCEEEEEEeCCCCCEEE-EE---eC----------------CCEEEEeeccCCc
Confidence 467889998887643321111 01133456778776555422 21 11 1467788887765
Q ss_pred eeecCCCCce-eecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEEe--CCeEEEE
Q 015251 218 WRSKGKLAYQ-FVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTVL--SGCLSVA 294 (410)
Q Consensus 218 Wr~~~~~p~~-~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~~--~G~L~~~ 294 (410)
-+........ .....-...-+|.+...... .+.|..+|+.++....+.... ....-+.+ +|.-.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-----dg~i~~wd~~~~~~~~~~~h~------~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDN-----VGNVILLNMDGKELWNLRMHK------KKVTHVALNPCCDWFLA 267 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECS-----SSBEEEEESSSCBCCCSBCCS------SCEEEEEECTTCSSEEE
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeC-----CCcEeeeccCcceeEEEeccc------ceEEeeeecCCCceEEE
Confidence 5443211100 00001111224544444433 367888998765433322211 11222222 3442333
Q ss_pred EeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE-ecCCEEEEE
Q 015251 295 VYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE-YKSRVLVSY 373 (410)
Q Consensus 295 ~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~~~~l~~y 373 (410)
....+..+.||-+........... ...+ ...+.-+++..+|..|+. ..++.+..|
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~------~~~h------------------~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLY------SLPH------------------RHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSB------CCBC------------------SSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred EecCcceeeEEecccccccceEEE------eeec------------------cccccceeECCCCCeeEEEcCCCEEEEE
Confidence 333467889997754221111100 0000 012333455566766654 455678888
Q ss_pred eCCCCcE
Q 015251 374 DPKRRTF 380 (410)
Q Consensus 374 d~~~~~~ 380 (410)
|..+...
T Consensus 324 d~~~~~~ 330 (435)
T 4e54_B 324 SASQWDC 330 (435)
T ss_dssp ESSSSSS
T ss_pred ECCCCcc
Confidence 8877653
No 33
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=81.34 E-value=29 Score=30.89 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=75.1
Q ss_pred ceEEEEEeC-CCceeecCC--CCc--eeecCCcceEECCe-EEEEecCCCCCCCceEEEEEcC--CceeeEE----cCCC
Q 015251 206 SDVQVYTVG-SPAWRSKGK--LAY--QFVRRPSEALVKGR-LHWVTRPRRYSPVRGIVSFDIA--DEQFREV----PKPD 273 (410)
Q Consensus 206 ~~~~Vyss~-t~~Wr~~~~--~p~--~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~Il~fDl~--~e~~~~i----~lP~ 273 (410)
..+.+|+.. ++....+.. .+. .+. .-.+.-+|. +|..... .+.|..||+. +.++..+ ..|.
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~--~~~~spdg~~l~v~~~~-----~~~v~v~~~~~~~g~~~~~~~~~~~~~ 234 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPR--HLVFSPDGQYAFLAGEL-----SSQIASLKYDTQTGAFTQLGIVKTIPA 234 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEE--EEEECTTSSEEEEEETT-----TTEEEEEEEETTTTEEEEEEEEESSCT
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCc--eEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCceEEeeeeeecCC
Confidence 578888888 565543321 000 010 001122576 5544433 3566666665 4665433 2232
Q ss_pred CCCCCCcceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEE
Q 015251 274 CGGLNRCNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRV 352 (410)
Q Consensus 274 ~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (410)
..........+.. -+|+..++.......+.||.++..+ .+.....+... .....-
T Consensus 235 ~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g---~~~~~~~~~~~---------------------~~~~~~ 290 (347)
T 3hfq_A 235 DYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG---HLTLIQQISTE---------------------GDFPRD 290 (347)
T ss_dssp TCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG---CEEEEEEEECS---------------------SSCCCE
T ss_pred CCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC---cEEEeEEEecC---------------------CCCcCe
Confidence 1110011122322 3576444433346789999997532 34444444320 001224
Q ss_pred EEEccCCcEEEEe--cCCEEEEE--eCCCCcEEEEEE
Q 015251 353 VCILEKGEILLEY--KSRVLVSY--DPKRRTFNEFVF 385 (410)
Q Consensus 353 ~~~~~~g~il~~~--~~~~l~~y--d~~~~~~~~v~~ 385 (410)
+++..+|+.++.. .++.+..| |.++++++.+.-
T Consensus 291 ~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 291 FDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 5677788865543 33566677 889999988774
No 34
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=79.73 E-value=35 Score=30.89 Aligned_cols=136 Identities=10% Similarity=0.052 Sum_probs=75.1
Q ss_pred ceEEEEEeCCC--ceeecCCCCcee-------ecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeE-EcCCCCC
Q 015251 206 SDVQVYTVGSP--AWRSKGKLAYQF-------VRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFRE-VPKPDCG 275 (410)
Q Consensus 206 ~~~~Vyss~t~--~Wr~~~~~p~~~-------~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~-i~lP~~~ 275 (410)
..+..|+..++ .|+.....+... ......+..+|.+|..... ..|.++|..+.+... .+.+.
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~------g~l~~~d~~tG~~~w~~~~~~-- 269 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN------GNLTALDLRSGQIMWKRELGS-- 269 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTT------SCEEEEETTTCCEEEEECCCC--
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecC------cEEEEEECCCCcEEeeccCCC--
Confidence 45778888777 687543222110 1224556778888887654 689999997765432 23221
Q ss_pred CCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEE
Q 015251 276 GLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCI 355 (410)
Q Consensus 276 ~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (410)
...+...+|.|++... ... |+.++....+..|.... + ... . ...++.
T Consensus 270 -----~~~~~~~~~~l~~~~~--~g~--l~~~d~~tG~~~w~~~~---~--~~~---~---------------~~~~~~- 316 (376)
T 3q7m_A 270 -----VNDFIVDGNRIYLVDQ--NDR--VMALTIDGGVTLWTQSD---L--LHR---L---------------LTSPVL- 316 (376)
T ss_dssp -----EEEEEEETTEEEEEET--TCC--EEEEETTTCCEEEEECT---T--TTS---C---------------CCCCEE-
T ss_pred -----CCCceEECCEEEEEcC--CCe--EEEEECCCCcEEEeecc---c--CCC---c---------------ccCCEE-
Confidence 2235556777766643 223 34444222245675420 1 000 0 011111
Q ss_pred ccCCcEEEEecCCEEEEEeCCCCcEEEE
Q 015251 356 LEKGEILLEYKSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 356 ~~~g~il~~~~~~~l~~yd~~~~~~~~v 383 (410)
.++.+++...++.++.+|.+++++..-
T Consensus 317 -~~~~l~v~~~~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 317 -YNGNLVVGDSEGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp -ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred -ECCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 246677777778899999999987643
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=79.65 E-value=29 Score=29.87 Aligned_cols=192 Identities=14% Similarity=0.166 Sum_probs=96.5
Q ss_pred ccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccC
Q 015251 125 SCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYP 204 (410)
Q Consensus 125 s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 204 (410)
..+|-+.+........+.++|+..+....+..... ....++.+++.. +++... ..
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~----~~~~~i~~~~~g---~l~v~~--~~---------------- 140 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL----QHPRGVTVDNKG---RIIVVE--CK---------------- 140 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC----SCEEEEEECTTS---CEEEEE--TT----------------
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC----CCceEEEEeCCC---CEEEEE--CC----------------
Confidence 46777766653124689999965554444543211 234567777743 233221 01
Q ss_pred CceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcce
Q 015251 205 RSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNY 282 (410)
Q Consensus 205 ~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~ 282 (410)
...+.+|+.....-+....... . ....++.+ +|.+|..... ...|..||...+....+..+... ....
T Consensus 141 ~~~i~~~~~~g~~~~~~~~~~~-~-~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~---~~p~ 210 (286)
T 1q7f_A 141 VMRVIIFDQNGNVLHKFGCSKH-L-EFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGIT---NYPI 210 (286)
T ss_dssp TTEEEEECTTSCEEEEEECTTT-C-SSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTS---CSEE
T ss_pred CCEEEEEcCCCCEEEEeCCCCc-c-CCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCcc---CCCc
Confidence 1456667654433332211000 0 01123333 4787765543 36899999987766666443211 1122
Q ss_pred EEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcE
Q 015251 283 HLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEI 361 (410)
Q Consensus 283 ~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 361 (410)
.+.. -+|.|++....+...+.+|-.+ + .-........ . .....-+++..+|.+
T Consensus 211 ~i~~d~~G~l~v~~~~~~~~i~~~~~~--g---~~~~~~~~~~--~-------------------~~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 211 GVGINSNGEILIADNHNNFNLTIFTQD--G---QLISALESKV--K-------------------HAQCFDVALMDDGSV 264 (286)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECTT--S---CEEEEEEESS--C-------------------CSCEEEEEEETTTEE
T ss_pred EEEECCCCCEEEEeCCCCEEEEEECCC--C---CEEEEEcccC--C-------------------CCcceeEEECCCCcE
Confidence 3333 3678777664422377777421 1 2222221111 0 001223566678888
Q ss_pred EEEecCCEEEEEeCCC
Q 015251 362 LLEYKSRVLVSYDPKR 377 (410)
Q Consensus 362 l~~~~~~~l~~yd~~~ 377 (410)
++...+..+..|+...
T Consensus 265 ~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 265 VLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEETTTEEEEEECSC
T ss_pred EEECCCCeEEEEEccc
Confidence 7776667788887654
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.42 E-value=34 Score=30.49 Aligned_cols=141 Identities=11% Similarity=0.068 Sum_probs=71.8
Q ss_pred ceEEEEEeCCCceeecCCCCceeecCCcceEE--C--CeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCc
Q 015251 206 SDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--K--GRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRC 280 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~--G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~ 280 (410)
..+.+++..++.|..+....... ..-.++.+ + |.+...+.. .+.|..+|+.+..- ..+.+..... .
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~---~ 149 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPIIIDAHAI---G 149 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCTTSCCCEEEEECCTT---C
T ss_pred CEEEEEEcCCCceeEeeeecCCC-cceEEEEeCCCCCCCEEEEecC-----CCcEEEEecCCCCceeeEEecCCCC---c
Confidence 57889999999876554221100 00011122 1 333333322 26788888876522 2222211110 0
Q ss_pred ceEEEEe--------------CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCC
Q 015251 281 NYHLTVL--------------SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLN 346 (410)
Q Consensus 281 ~~~l~~~--------------~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~ 346 (410)
...+.-. +|.+.++... +..+.||-+... ...|.....+...
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~--~~~~~~~~~~~~h--------------------- 205 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSD--AQTYVLESTLEGH--------------------- 205 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEET-TSCEEEEEEETT--TTEEEEEEEECCC---------------------
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecCC--CcceeeEEEEecc---------------------
Confidence 1122222 4666555543 678999998752 3456665554431
Q ss_pred CceeEEEEEccC---CcEEEE-ecCCEEEEEeCCCCc
Q 015251 347 GRVVRVVCILEK---GEILLE-YKSRVLVSYDPKRRT 379 (410)
Q Consensus 347 ~~~~~~~~~~~~---g~il~~-~~~~~l~~yd~~~~~ 379 (410)
...+.-+++..+ +.+++. ..++.+..||.+++.
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 013445566666 666554 445678888887763
No 37
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=79.02 E-value=33 Score=30.10 Aligned_cols=142 Identities=13% Similarity=0.084 Sum_probs=68.6
Q ss_pred ceEEEEEeC-CCceeecCCCCceeecCCcceEE--CCe-EEEEecCCCCCCCceEEEEEcC--CceeeEE-cCCCCCCCC
Q 015251 206 SDVQVYTVG-SPAWRSKGKLAYQFVRRPSEALV--KGR-LHWVTRPRRYSPVRGIVSFDIA--DEQFREV-PKPDCGGLN 278 (410)
Q Consensus 206 ~~~~Vyss~-t~~Wr~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~Il~fDl~--~e~~~~i-~lP~~~~~~ 278 (410)
..+.+|+.. +++.+.+...+.. ....++.+ +|. +|..... .+.|..||+. ++++..+ .++....
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~-- 85 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVDVP--GQVQPMVVSPDKRYLYVGVRP-----EFRVLAYRIAPDDGALTFAAESALPGS-- 85 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEECS--SCCCCEEECTTSSEEEEEETT-----TTEEEEEEECTTTCCEEEEEEEECSSC--
T ss_pred CeEEEEEECCCCcEEEeeeEecC--CCCceEEECCCCCEEEEeecC-----CCeEEEEEecCCCCceeeccccccCCC--
Confidence 467777774 4455443211110 01112222 455 5555443 2678888887 6666544 2221111
Q ss_pred CcceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc
Q 015251 279 RCNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE 357 (410)
Q Consensus 279 ~~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (410)
...+.. -+|+..++.......+.+|-++ .+ ........+... . ...-+++..
T Consensus 86 --~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~--~~~~~~~~~~~~--~--------------------~~~~~~~s~ 138 (343)
T 1ri6_A 86 --LTHISTDHQGQFVFVGSYNAGNVSVTRLE-DG--LPVGVVDVVEGL--D--------------------GCHSANISP 138 (343)
T ss_dssp --CSEEEECTTSSEEEEEETTTTEEEEEEEE-TT--EEEEEEEEECCC--T--------------------TBCCCEECT
T ss_pred --CcEEEEcCCCCEEEEEecCCCeEEEEECC-CC--ccccccccccCC--C--------------------CceEEEECC
Confidence 112322 3566554444446779999886 22 223333333220 0 111234555
Q ss_pred CCcEEEE-e-cCCEEEEEeCCC-CcEEEE
Q 015251 358 KGEILLE-Y-KSRVLVSYDPKR-RTFNEF 383 (410)
Q Consensus 358 ~g~il~~-~-~~~~l~~yd~~~-~~~~~v 383 (410)
+|+.++. . .++.+..||+.+ ++++.+
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 6664443 3 456788888877 666543
No 38
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=77.99 E-value=37 Score=30.16 Aligned_cols=123 Identities=14% Similarity=0.111 Sum_probs=65.0
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcC-CCCCCCCCcceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCc
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPK-PDCGGLNRCNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKES 315 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~l-P~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~ 315 (410)
+|.+|..... .....|..||+.+.+...+.. +... . ....+.. -+|+..++.......+.+|.++..+ .
T Consensus 50 dg~l~~~~~~---~~~~~v~~~~~~~g~~~~~~~~~~~~-~--~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g---~ 120 (347)
T 3hfq_A 50 KDCLYSVDKE---DDEGGIAAWQIDGQTAHKLNTVVAPG-T--PPAYVAVDEARQLVYSANYHKGTAEVMKIAADG---A 120 (347)
T ss_dssp TCEEEEEEEE---TTEEEEEEEEEETTEEEEEEEEEEES-C--CCSEEEEETTTTEEEEEETTTTEEEEEEECTTS---C
T ss_pred CCeEEEEEec---CCCceEEEEEecCCcEEEeeeeecCC-C--CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC---C
Confidence 6887777642 113689999998877766532 2111 1 1122333 3576555544446789999997533 2
Q ss_pred eeeEEEeccC--cCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEe-cCCEEEEEeCC-CCcEEEE
Q 015251 316 WAKELNIGAY--IPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEY-KSRVLVSYDPK-RRTFNEF 383 (410)
Q Consensus 316 W~~~~~i~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~-~~~~l~~yd~~-~~~~~~v 383 (410)
......+... -|. ..+ ......-+++..+|++++.. .++.+..||++ ++++..+
T Consensus 121 ~~~~~~~~~~~~~p~-~~~-------------~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 121 LTLTDTVQHSGHGPR-PEQ-------------DGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEEEECCCCCSS-TTC-------------SSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred eeecceeecCCCCCC-ccc-------------cCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 3333333221 000 000 01123446677778744433 34578888887 6666544
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=76.14 E-value=45 Score=30.11 Aligned_cols=178 Identities=9% Similarity=0.044 Sum_probs=91.4
Q ss_pred CCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCC
Q 015251 137 FNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSP 216 (410)
Q Consensus 137 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~ 216 (410)
..+.+.|||..+++....-... ....++.++|.. .+-++. .. . ...+.+++..++
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg-~~l~~~--~~-~----------------d~~i~v~d~~~~ 64 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVG-----SNPMGAVISPDG-TKVYVA--NA-H----------------SNDVSIIDTATN 64 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTS-SEEEEE--EG-G----------------GTEEEEEETTTT
T ss_pred CCCEEEEEECCCCeEEEEeecC-----CCcceEEECCCC-CEEEEE--CC-C----------------CCeEEEEECCCC
Confidence 3568899999988765432211 123556676643 222222 11 1 157888998887
Q ss_pred ceeecCCCCceeecCCcceEE--CCe-EEEEecCCCCCCCceEEEEEcCCceee-EEcCCCCCCCCCcceEEEEe-CCeE
Q 015251 217 AWRSKGKLAYQFVRRPSEALV--KGR-LHWVTRPRRYSPVRGIVSFDIADEQFR-EVPKPDCGGLNRCNYHLTVL-SGCL 291 (410)
Q Consensus 217 ~Wr~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i~lP~~~~~~~~~~~l~~~-~G~L 291 (410)
+-...-.....+ .++.+ +|. ++..... ...|..+|+.+.+.. .+..+. ....+... +|+.
T Consensus 65 ~~~~~~~~~~~v----~~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 65 NVIATVPAGSSP----QGVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTVAGTVKTGK------SPLGLALSPDGKK 129 (391)
T ss_dssp EEEEEEECSSSE----EEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECSS------SEEEEEECTTSSE
T ss_pred eEEEEEECCCCc----cceEECCCCCEEEEEECC-----CCEEEEEECCCCeEEEEEeCCC------CcceEEECCCCCE
Confidence 543221111111 11222 454 3333322 368999999887653 333321 11223332 4654
Q ss_pred EEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE--ecCCE
Q 015251 292 SVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE--YKSRV 369 (410)
Q Consensus 292 ~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~--~~~~~ 369 (410)
.++.......+.+|-++. .... ..+... .....+.+..+|+.++. ..++.
T Consensus 130 l~~~~~~~~~v~~~d~~~----~~~~--~~~~~~----------------------~~~~~~~~~~dg~~l~~~~~~~~~ 181 (391)
T 1l0q_A 130 LYVTNNGDKTVSVINTVT----KAVI--NTVSVG----------------------RSPKGIAVTPDGTKVYVANFDSMS 181 (391)
T ss_dssp EEEEETTTTEEEEEETTT----TEEE--EEEECC----------------------SSEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEEeCCCCEEEEEECCC----CcEE--EEEecC----------------------CCcceEEECCCCCEEEEEeCCCCE
Confidence 444444467888887643 1222 222210 01234566667765543 34567
Q ss_pred EEEEeCCCCcEEE
Q 015251 370 LVSYDPKRRTFNE 382 (410)
Q Consensus 370 l~~yd~~~~~~~~ 382 (410)
+..||+++++...
T Consensus 182 v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 182 ISVIDTVTNSVID 194 (391)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCeEEE
Confidence 8999998887654
No 40
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=75.51 E-value=44 Score=29.71 Aligned_cols=105 Identities=9% Similarity=0.063 Sum_probs=54.3
Q ss_pred ceEEEEEcCCce--eeEE-cCCCCCCCCCcceEEEEe-C---CeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCc
Q 015251 254 RGIVSFDIADEQ--FREV-PKPDCGGLNRCNYHLTVL-S---GCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYI 326 (410)
Q Consensus 254 ~~Il~fDl~~e~--~~~i-~lP~~~~~~~~~~~l~~~-~---G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~ 326 (410)
+.|..+|+.+.. +..+ .+..... ....+.-. + |.+.+... .+..+.||-++... ..+.... +...
T Consensus 182 g~i~i~d~~~~~~~~~~~~~~~~h~~---~v~~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~~-~~~~- 253 (379)
T 3jrp_A 182 NLVKIWKYNSDAQTYVLESTLEGHSD---WVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQ--GPWKKTL-LKEE- 253 (379)
T ss_dssp SCEEEEEEETTTTEEEEEEEECCCSS---CEEEEEECCCCSSSEEEEEEE-TTSCEEEEEESSTT--SCCEEEE-SSSS-
T ss_pred CeEEEEEecCCCcceeeEEEEecccC---cEeEEEECCCCCCCCeEEEEe-CCCEEEEEeCCCCC--ccceeee-eccc-
Confidence 578888886543 3333 2222111 11122222 2 55555554 36789999987632 2222221 1110
Q ss_pred CcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE-ecCCEEEEEeCC-CCcEEEEE
Q 015251 327 PKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE-YKSRVLVSYDPK-RRTFNEFV 384 (410)
Q Consensus 327 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~~~~l~~yd~~-~~~~~~v~ 384 (410)
. ....+.-+++..+|.+++. ..++.+..||.. .++++.+.
T Consensus 254 --------~----------~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 254 --------K----------FPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 295 (379)
T ss_dssp --------C----------CSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEE
T ss_pred --------c----------CCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccc
Confidence 0 0113445677777876554 566778999987 45565554
No 41
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=75.44 E-value=37 Score=28.78 Aligned_cols=204 Identities=11% Similarity=-0.015 Sum_probs=97.1
Q ss_pred EEeccCceEEEeeccCCceEEEEcccc-cceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccc
Q 015251 122 AVGSCNGLLCLSDSLFNDAICIYNPFT-RDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRR 200 (410)
Q Consensus 122 ~~~s~~Gll~l~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 200 (410)
+.-+-+|-.++.. ....++++|..+ ++...+...... .....+.+.|.. .+ ++.. .... ++
T Consensus 47 ~~~spdg~~l~~~--~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg-~~-l~~~-~~~~---~~------- 108 (297)
T 2ojh_A 47 PNWSPDGKYLLLN--SEGLLYRLSLAGDPSPEKVDTGFAT---ICNNDHGISPDG-AL-YAIS-DKVE---FG------- 108 (297)
T ss_dssp EEECTTSSEEEEE--ETTEEEEEESSSCCSCEECCCTTCC---CBCSCCEECTTS-SE-EEEE-ECTT---TS-------
T ss_pred eEECCCCCEEEEE--cCCeEEEEeCCCCCCceEecccccc---ccccceEECCCC-CE-EEEE-EeCC---CC-------
Confidence 3334455543333 246899999999 887776543211 122234555542 22 2222 1111 01
Q ss_pred cccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCe-EEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCC
Q 015251 201 VIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGR-LHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNR 279 (410)
Q Consensus 201 ~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~ 279 (410)
...+.+++..++.-+.+........ ....-+|. +++..... ....|..+|+.+.+...+.....
T Consensus 109 ----~~~l~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~----- 173 (297)
T 2ojh_A 109 ----KSAIYLLPSTGGTPRLMTKNLPSYW---HGWSPDGKSFTYCGIRD---QVFDIYSMDIDSGVETRLTHGEG----- 173 (297)
T ss_dssp ----SCEEEEEETTCCCCEECCSSSSEEE---EEECTTSSEEEEEEEET---TEEEEEEEETTTCCEEECCCSSS-----
T ss_pred ----cceEEEEECCCCceEEeecCCCccc---eEECCCCCEEEEEECCC---CceEEEEEECCCCcceEcccCCC-----
Confidence 2566667766666554432211100 01111343 33333221 12356666776665544422210
Q ss_pred cceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccC
Q 015251 280 CNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEK 358 (410)
Q Consensus 280 ~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (410)
....+.- -+|...++.......+.||.++..+ ... ..+... ......+.+..+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~~---~~~~~~---------------------~~~~~~~~~s~d 227 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SSV---ERITDS---------------------AYGDWFPHPSPS 227 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCE---EECCCC---------------------SEEEEEEEECTT
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCC--CCc---EEEecC---------------------CcccCCeEECCC
Confidence 1112222 2566544444335678999987422 111 111110 012334566677
Q ss_pred CcEEEE-ecC-----------CEEEEEeCCCCcEEEEE
Q 015251 359 GEILLE-YKS-----------RVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 359 g~il~~-~~~-----------~~l~~yd~~~~~~~~v~ 384 (410)
|+.++. ..+ ..|+.||+++++.+.+.
T Consensus 228 g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 228 GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 875543 221 46999999998877665
No 42
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=74.56 E-value=49 Score=30.35 Aligned_cols=110 Identities=13% Similarity=0.070 Sum_probs=58.5
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEE-cCCCCCCCCCcceEEEEe--CCeEEEEEeCCCCeEEEEEEeeCCCCC
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREV-PKPDCGGLNRCNYHLTVL--SGCLSVAVYGNYGKLEIWVMKDYNVKE 314 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i-~lP~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~l~IW~l~~~~~~~ 314 (410)
+|.++..... .+.|..+|+.+.+.... +.+..... .....-+.+ +|.+.+... ....+.+|-++.. +
T Consensus 133 ~~~~~~~~~~-----~~~i~~~d~~~g~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~s~~-~d~~v~~~d~~~~--~- 202 (433)
T 3bws_A 133 NTRLAIPLLE-----DEGMDVLDINSGQTVRLSPPEKYKKK-LGFVETISIPEHNELWVSQM-QANAVHVFDLKTL--A- 202 (433)
T ss_dssp SSEEEEEBTT-----SSSEEEEETTTCCEEEECCCHHHHTT-CCEEEEEEEGGGTEEEEEEG-GGTEEEEEETTTC--C-
T ss_pred CCeEEEEeCC-----CCeEEEEECCCCeEeeecCccccccc-CCceeEEEEcCCCEEEEEEC-CCCEEEEEECCCc--e-
Confidence 5566555443 35699999988766443 22111111 111222223 567666554 3678999987531 1
Q ss_pred ceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE-e-cCCEEEEEeCCCCcEE
Q 015251 315 SWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE-Y-KSRVLVSYDPKRRTFN 381 (410)
Q Consensus 315 ~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~-~~~~l~~yd~~~~~~~ 381 (410)
....+... .....-+++..+|+.++. . .++.+..||+++++..
T Consensus 203 ---~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 203 ---YKATVDLT---------------------GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI 247 (433)
T ss_dssp ---EEEEEECS---------------------SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred ---EEEEEcCC---------------------CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence 12222210 012334566667776644 3 4578999999887654
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=73.82 E-value=51 Score=29.69 Aligned_cols=191 Identities=10% Similarity=0.025 Sum_probs=97.8
Q ss_pred EEeccCc-eEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccc
Q 015251 122 AVGSCNG-LLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRR 200 (410)
Q Consensus 122 ~~~s~~G-ll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 200 (410)
+.-+.+| .|++... ..+.+.++|+.|++....-... ....++.++|.. .+-++. . ..
T Consensus 37 ~~~s~dg~~l~~~~~-~d~~i~v~d~~~~~~~~~~~~~-----~~v~~~~~spdg-~~l~~~--~-~~------------ 94 (391)
T 1l0q_A 37 AVISPDGTKVYVANA-HSNDVSIIDTATNNVIATVPAG-----SSPQGVAVSPDG-KQVYVT--N-MA------------ 94 (391)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTS-SEEEEE--E-TT------------
T ss_pred EEECCCCCEEEEECC-CCCeEEEEECCCCeEEEEEECC-----CCccceEECCCC-CEEEEE--E-CC------------
Confidence 3344455 3434332 3568999999998875532211 134566777643 222222 1 01
Q ss_pred cccCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCe-EEEEecCCCCCCCceEEEEEcCCceeeE-EcCCCCCC
Q 015251 201 VIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGR-LHWVTRPRRYSPVRGIVSFDIADEQFRE-VPKPDCGG 276 (410)
Q Consensus 201 ~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~~~-i~lP~~~~ 276 (410)
...+.+|+..+++-...-.....+ .++.+ +|. +|..... .+.|..+|+.+.+... +....
T Consensus 95 ----~~~v~v~d~~~~~~~~~~~~~~~~----~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~--- 158 (391)
T 1l0q_A 95 ----SSTLSVIDTTSNTVAGTVKTGKSP----LGLALSPDGKKLYVTNNG-----DKTVSVINTVTKAVINTVSVGR--- 158 (391)
T ss_dssp ----TTEEEEEETTTTEEEEEEECSSSE----EEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECCS---
T ss_pred ----CCEEEEEECCCCeEEEEEeCCCCc----ceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEecCC---
Confidence 157889998887543221111111 12222 454 4444432 3689999998876533 33321
Q ss_pred CCCcceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEE
Q 015251 277 LNRCNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCI 355 (410)
Q Consensus 277 ~~~~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (410)
....+.. -+|+..++.......+.+|-+.. ......+... ....-+++
T Consensus 159 ---~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~----------------------~~~~~~~~ 207 (391)
T 1l0q_A 159 ---SPKGIAVTPDGTKVYVANFDSMSISVIDTVT------NSVIDTVKVE----------------------AAPSGIAV 207 (391)
T ss_dssp ---SEEEEEECTTSSEEEEEETTTTEEEEEETTT------TEEEEEEECS----------------------SEEEEEEE
T ss_pred ---CcceEEECCCCCEEEEEeCCCCEEEEEECCC------CeEEEEEecC----------------------CCccceEE
Confidence 1122222 24554444444467888887643 1222222220 12334566
Q ss_pred ccCCcEEEEe----cCCEEEEEeCCCCcEE
Q 015251 356 LEKGEILLEY----KSRVLVSYDPKRRTFN 381 (410)
Q Consensus 356 ~~~g~il~~~----~~~~l~~yd~~~~~~~ 381 (410)
..+|+.++.. .++.+..||+++++..
T Consensus 208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 6677655543 4578889998887653
No 44
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=73.26 E-value=56 Score=29.92 Aligned_cols=196 Identities=13% Similarity=0.094 Sum_probs=100.4
Q ss_pred eccCceEEEeeccCCceEEEEcccccceee-CCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccc
Q 015251 124 GSCNGLLCLSDSLFNDAICIYNPFTRDYIE-LPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVI 202 (410)
Q Consensus 124 ~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 202 (410)
-+.+|-+++... ..+.+.+||+.+++... ++... ....++.+++..+ + ++.. . ..
T Consensus 177 ~~~~~~~~~s~~-~d~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~-l~~~-~-~~-------------- 232 (433)
T 3bws_A 177 IPEHNELWVSQM-QANAVHVFDLKTLAYKATVDLTG-----KWSKILLYDPIRD-L-VYCS-N-WI-------------- 232 (433)
T ss_dssp EGGGTEEEEEEG-GGTEEEEEETTTCCEEEEEECSS-----SSEEEEEEETTTT-E-EEEE-E-TT--------------
T ss_pred EcCCCEEEEEEC-CCCEEEEEECCCceEEEEEcCCC-----CCeeEEEEcCCCC-E-EEEE-e-cC--------------
Confidence 355776666543 35689999998876543 33211 2345667777532 2 2222 1 01
Q ss_pred cCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCC-CC--CCceEEEEEcCCceeeE-EcCCCCCC
Q 015251 203 YPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRR-YS--PVRGIVSFDIADEQFRE-VPKPDCGG 276 (410)
Q Consensus 203 ~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~-~~--~~~~Il~fDl~~e~~~~-i~lP~~~~ 276 (410)
...+.+|+.++++....-.....+ .++.+ +|...+.+.... .. ..+.|..||+.+.+... +..+.
T Consensus 233 --~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--- 303 (433)
T 3bws_A 233 --SEDISVIDRKTKLEIRKTDKIGLP----RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--- 303 (433)
T ss_dssp --TTEEEEEETTTTEEEEECCCCSEE----EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE---
T ss_pred --CCcEEEEECCCCcEEEEecCCCCc----eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC---
Confidence 257888998887553322111111 11222 454444443210 00 13689999998775533 22221
Q ss_pred CCCcceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEE
Q 015251 277 LNRCNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCI 355 (410)
Q Consensus 277 ~~~~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (410)
....+.. -+|...++.......+.+|-++. ......+... ....-+++
T Consensus 304 ---~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~------~~~~~~~~~~----------------------~~~~~~~~ 352 (433)
T 3bws_A 304 ---NKRHIVSGNTENKIYVSDMCCSKIEVYDLKE------KKVQKSIPVF----------------------DKPNTIAL 352 (433)
T ss_dssp ---CEEEEEECSSTTEEEEEETTTTEEEEEETTT------TEEEEEEECS----------------------SSEEEEEE
T ss_pred ---CcceEEECCCCCEEEEEecCCCEEEEEECCC------CcEEEEecCC----------------------CCCCeEEE
Confidence 0112222 24543334333467899998753 1222233220 12334667
Q ss_pred ccCCcEEEEec----------------CCEEEEEeCCCCcEEEE
Q 015251 356 LEKGEILLEYK----------------SRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 356 ~~~g~il~~~~----------------~~~l~~yd~~~~~~~~v 383 (410)
..+|+.++... ++.+..||.++++....
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 77787655432 24899999998876543
No 45
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=72.83 E-value=52 Score=29.38 Aligned_cols=34 Identities=9% Similarity=0.161 Sum_probs=24.1
Q ss_pred EEEEEccCCcEEEEe--cCCEEEEEeCCCCcEEEEE
Q 015251 351 RVVCILEKGEILLEY--KSRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 351 ~~~~~~~~g~il~~~--~~~~l~~yd~~~~~~~~v~ 384 (410)
+-+++..+|+.++.. .+..+..||.++++++.+.
T Consensus 214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 346777788765543 3577889999888876655
No 46
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=72.72 E-value=46 Score=28.71 Aligned_cols=112 Identities=11% Similarity=0.107 Sum_probs=66.9
Q ss_pred EECCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCC
Q 015251 236 LVKGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKE 314 (410)
Q Consensus 236 ~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~ 314 (410)
+.+|.||--+.. .+...|..+|+++.+- ..+++|... +..-+...+++|+++... .. .+|+.+- .
T Consensus 28 ~~~~~LyestG~---~g~S~v~~vD~~tgkv~~~~~l~~~~----fgeGi~~~~~~ly~ltw~-~~--~v~v~D~----~ 93 (243)
T 3mbr_X 28 YLRGHLYESTGE---TGRSSVRKVDLETGRILQRAEVPPPY----FGAGIVAWRDRLIQLTWR-NH--EGFVYDL----A 93 (243)
T ss_dssp EETTEEEEEECC---TTSCEEEEEETTTCCEEEEEECCTTC----CEEEEEEETTEEEEEESS-SS--EEEEEET----T
T ss_pred EECCEEEEECCC---CCCceEEEEECCCCCEEEEEeCCCCc----ceeEEEEeCCEEEEEEee-CC--EEEEEEC----C
Confidence 556777766554 2346899999988765 667888532 234466678898888643 23 3455542 2
Q ss_pred ceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCC-cEEEEecCCEEEEEeCCCCcEE-EEEE
Q 015251 315 SWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKG-EILLEYKSRVLVSYDPKRRTFN-EFVF 385 (410)
Q Consensus 315 ~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~il~~~~~~~l~~yd~~~~~~~-~v~~ 385 (410)
.-.+..+|... . .-| ++..+| .+++..++..|..+|++|.+.. .|..
T Consensus 94 tl~~~~ti~~~-~-----------~Gw------------glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 94 TLTPRARFRYP-G-----------EGW------------ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TTEEEEEEECS-S-----------CCC------------EEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEEEeCC-C-----------Cce------------EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 23444555541 0 012 333344 5666667788999999986653 3443
No 47
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=69.62 E-value=61 Score=28.82 Aligned_cols=193 Identities=8% Similarity=-0.103 Sum_probs=98.8
Q ss_pred cCceEEEeeccCCceEEEEcccccce-eeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccC
Q 015251 126 CNGLLCLSDSLFNDAICIYNPFTRDY-IELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYP 204 (410)
Q Consensus 126 ~~Gll~l~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 204 (410)
.++.+.+... ..+.+.|+|+.|++. ..+|.. ....++++++. . ++..... .
T Consensus 52 ~~~~lyv~~~-~~~~v~viD~~t~~~~~~i~~~------~~p~~i~~~~~--g-~lyv~~~--~---------------- 103 (328)
T 3dsm_A 52 RDGIGWIVVN-NSHVIFAIDINTFKEVGRITGF------TSPRYIHFLSD--E-KAYVTQI--W---------------- 103 (328)
T ss_dssp ETTEEEEEEG-GGTEEEEEETTTCCEEEEEECC------SSEEEEEEEET--T-EEEEEEB--S----------------
T ss_pred ECCEEEEEEc-CCCEEEEEECcccEEEEEcCCC------CCCcEEEEeCC--C-eEEEEEC--C----------------
Confidence 4565555443 346899999999987 446432 12345566543 2 4544321 1
Q ss_pred CceEEEEEeCCCcee-ecCCCC--ceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCc
Q 015251 205 RSDVQVYTVGSPAWR-SKGKLA--YQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRC 280 (410)
Q Consensus 205 ~~~~~Vyss~t~~Wr-~~~~~p--~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~ 280 (410)
...+.+++..+++-. .+.... ........-+..+|.+|..... ..+.|.++|+.+.+. ..++.....
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD~~t~~~~~~i~~g~~p----- 174 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKIDTETDKVVDELTIGIQP----- 174 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEETTTTEEEEEEECSSCB-----
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEECCCCeEEEEEEcCCCc-----
Confidence 157888888887532 222101 0000011122367778776541 136899999998765 445543211
Q ss_pred ceEEE-EeCCeEEEEEeCCCC-------eEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEE
Q 015251 281 NYHLT-VLSGCLSVAVYGNYG-------KLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRV 352 (410)
Q Consensus 281 ~~~l~-~~~G~L~~~~~~~~~-------~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (410)
..+. .-+|+++++...... .-.|++++.. ..... ..+.. +.+ ....-
T Consensus 175 -~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~~v~--~~~~~--~~g------------------~~p~~ 229 (328)
T 3dsm_A 175 -TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TFTVE--KQFKF--KLG------------------DWPSE 229 (328)
T ss_dssp -CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TTEEE--EEEEC--CTT------------------CCCEE
T ss_pred -cceEEcCCCCEEEEECCCccCCccccCCceEEEEECC--CCeEE--EEEec--CCC------------------CCcee
Confidence 1122 235787666543210 1244555431 12222 23332 100 01223
Q ss_pred EEEccCCcEEEEecCCEEEEEeCCCCcEE
Q 015251 353 VCILEKGEILLEYKSRVLVSYDPKRRTFN 381 (410)
Q Consensus 353 ~~~~~~g~il~~~~~~~l~~yd~~~~~~~ 381 (410)
+++..+|+.++..+. .++.+|++++++.
T Consensus 230 la~~~d~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 230 VQLNGTRDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp EEECTTSCEEEEESS-SEEEEETTCSSCC
T ss_pred EEEecCCCEEEEEcc-EEEEEECCCCcee
Confidence 566666776666554 6889999888763
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=68.67 E-value=66 Score=28.88 Aligned_cols=184 Identities=9% Similarity=0.099 Sum_probs=95.0
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
.+.+.|||..+++....-.... ....+..+.+.|..+.+-+.. . . ...+.+++..+..
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~--~--~----------------d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVS--S--I----------------RGATTLRDFSGSV 152 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEE--E--T----------------TTEEEEEETTSCE
T ss_pred CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEE--e--C----------------CCEEEEEECCCCc
Confidence 4577888888777654332111 113456677776432322222 1 1 2578888888766
Q ss_pred eeecCCCC---ceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEEe-CCe-EE
Q 015251 218 WRSKGKLA---YQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTVL-SGC-LS 292 (410)
Q Consensus 218 Wr~~~~~p---~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~~-~G~-L~ 292 (410)
.+...... ..+. .-...-+|.+...+.. .+.|..+|+..+....+..... ....+.-. +|. +.
T Consensus 153 ~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYC--CVDVSVSRQMLATGDS-----TGRLLLLGLDGHEIFKEKLHKA-----KVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEECCCCSSCCEE--EEEEETTTTEEEEEET-----TSEEEEEETTSCEEEEEECSSS-----CEEEEEECSSCTTEE
T ss_pred eEEEeccCCCCCCeE--EEEECCCCCEEEEECC-----CCCEEEEECCCCEEEEeccCCC-----cEEEEEECCCCCCEE
Confidence 55443211 0010 0011123443333332 3689999997666555543221 11222222 344 55
Q ss_pred EEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc-CCcEEEE-ecCCEE
Q 015251 293 VAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE-KGEILLE-YKSRVL 370 (410)
Q Consensus 293 ~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~il~~-~~~~~l 370 (410)
+.+. .+..+.||-+........ ....+.. ...+.-+.+.. +|..++. ..++.+
T Consensus 221 ~s~~-~d~~i~iwd~~~~~~~~~--~~~~~~~----------------------~~~v~~~~~s~~~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 221 ATSS-VDATVKLWDLRNIKDKNS--YIAEMPH----------------------EKPVNAAYFNPTDSTKLLTTDQRNEI 275 (383)
T ss_dssp EEEE-TTSEEEEEEGGGCCSTTC--EEEEEEC----------------------SSCEEEEEECTTTSCEEEEEESSSEE
T ss_pred EEEe-CCCEEEEEeCCCCCcccc--eEEEecC----------------------CCceEEEEEcCCCCCEEEEEcCCCcE
Confidence 5444 367899999876321122 2222221 01344566766 7776664 456789
Q ss_pred EEEeCCCCcE
Q 015251 371 VSYDPKRRTF 380 (410)
Q Consensus 371 ~~yd~~~~~~ 380 (410)
..||+++++.
T Consensus 276 ~iwd~~~~~~ 285 (383)
T 3ei3_B 276 RVYSSYDWSK 285 (383)
T ss_dssp EEEETTBTTS
T ss_pred EEEECCCCcc
Confidence 9999987654
No 49
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=68.65 E-value=60 Score=28.36 Aligned_cols=108 Identities=12% Similarity=0.058 Sum_probs=62.2
Q ss_pred EECCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCC
Q 015251 236 LVKGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKE 314 (410)
Q Consensus 236 ~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~ 314 (410)
+.+|.||--+.. .+...|..+|+++.+- ..+++|+.. +..-+...+++|+++... .. .+|+.+- .
T Consensus 50 ~~~~~LyestG~---~g~S~v~~vD~~Tgkv~~~~~l~~~~----FgeGit~~g~~ly~ltw~-~~--~v~v~D~----~ 115 (262)
T 3nol_A 50 YRNGYFYESTGL---NGRSSIRKVDIESGKTLQQIELGKRY----FGEGISDWKDKIVGLTWK-NG--LGFVWNI----R 115 (262)
T ss_dssp EETTEEEEEEEE---TTEEEEEEECTTTCCEEEEEECCTTC----CEEEEEEETTEEEEEESS-SS--EEEEEET----T
T ss_pred EECCEEEEECCC---CCCceEEEEECCCCcEEEEEecCCcc----ceeEEEEeCCEEEEEEee-CC--EEEEEEC----c
Confidence 457877776644 1235899999998765 667887522 233466678888887653 23 3455542 2
Q ss_pred ceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCc-EEEEecCCEEEEEeCCCCcEE
Q 015251 315 SWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGE-ILLEYKSRVLVSYDPKRRTFN 381 (410)
Q Consensus 315 ~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~~~~~~l~~yd~~~~~~~ 381 (410)
.-.+..+|... +. -| ++..+|+ +++..++..|..+|++|.+..
T Consensus 116 t~~~~~ti~~~-~e-----------G~------------glt~dg~~L~~SdGs~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 116 NLRQVRSFNYD-GE-----------GW------------GLTHNDQYLIMSDGTPVLRFLDPESLTPV 159 (262)
T ss_dssp TCCEEEEEECS-SC-----------CC------------CEEECSSCEEECCSSSEEEEECTTTCSEE
T ss_pred cCcEEEEEECC-CC-----------ce------------EEecCCCEEEEECCCCeEEEEcCCCCeEE
Confidence 23344455441 11 01 2323444 444455677888998875543
No 50
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=68.23 E-value=77 Score=29.44 Aligned_cols=120 Identities=13% Similarity=0.129 Sum_probs=66.6
Q ss_pred ECCeEEEEecCCCCCCCceEEEEEcCCceeeE---EcC-CC---CCCCCCcce-EEEEe--CCeEEEEEeC------CCC
Q 015251 237 VKGRLHWVTRPRRYSPVRGIVSFDIADEQFRE---VPK-PD---CGGLNRCNY-HLTVL--SGCLSVAVYG------NYG 300 (410)
Q Consensus 237 ~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~---i~l-P~---~~~~~~~~~-~l~~~--~G~L~~~~~~------~~~ 300 (410)
.+|.++|.+.. +.+.++|+.++.-.. +.+ .. ......... .++.- +++|++.... +..
T Consensus 236 ~dG~~~~vs~~------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 236 KAGRLVWPTYT------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp TTTEEEEEBTT------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred CCCcEEEEeCC------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 37899998876 689999998775322 221 00 000000011 12222 3456655421 123
Q ss_pred eEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCc-EEEE-e-cCCEEEEEeCCC
Q 015251 301 KLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGE-ILLE-Y-KSRVLVSYDPKR 377 (410)
Q Consensus 301 ~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~-~-~~~~l~~yd~~~ 377 (410)
.=+||+++- ..+....+|.+- ....-+++..||+ .++. . .++.+..||..+
T Consensus 310 ~~~V~viD~----~t~kv~~~i~vg----------------------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 310 SRFVVVLDA----KTGERLAKFEMG----------------------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp EEEEEEEET----TTCCEEEEEEEE----------------------EEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEEC----CCCeEEEEEECC----------------------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 578999984 346666666651 0122467777875 5555 3 367899999998
Q ss_pred CcEEE-EEEeCC
Q 015251 378 RTFNE-FVFKGT 388 (410)
Q Consensus 378 ~~~~~-v~~~~~ 388 (410)
++..+ +...+.
T Consensus 364 ~k~~~~i~~~~~ 375 (386)
T 3sjl_D 364 GEELRSVNQLGH 375 (386)
T ss_dssp CCEEEEECCCCS
T ss_pred CcEEEEecCCCC
Confidence 87643 333343
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=65.70 E-value=68 Score=27.92 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=75.1
Q ss_pred ceEEEEEeCC-CceeecC--C--CCceeecCCcceEE--CCe-EEEEecCCCCCCCceEEEEEcC--Cceee---EE-cC
Q 015251 206 SDVQVYTVGS-PAWRSKG--K--LAYQFVRRPSEALV--KGR-LHWVTRPRRYSPVRGIVSFDIA--DEQFR---EV-PK 271 (410)
Q Consensus 206 ~~~~Vyss~t-~~Wr~~~--~--~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~Il~fDl~--~e~~~---~i-~l 271 (410)
..+.+|+..+ ++..... . .+.. ....++.+ +|. +|..... .+.|..||+. +.++. .+ .+
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEG--AGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMM 223 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTT--CCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECS
T ss_pred CEEEEEEecCCCceeeecccccccCCC--CCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeecccc
Confidence 5688888887 6664322 0 0000 00011222 455 4444433 3678899984 34443 22 23
Q ss_pred CCCCCCCCcceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCcee
Q 015251 272 PDCGGLNRCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVV 350 (410)
Q Consensus 272 P~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 350 (410)
|...........+... +|+..++.......+.+|.++..+ ..+.....+... . ..
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~--~~~~~~~~~~~~---------~-------------~~ 279 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG--SVLSKEGFQPTE---------T-------------QP 279 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CCEEEEEEEECS---------S-------------SC
T ss_pred CccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC--CceEEeeeecCC---------C-------------cc
Confidence 4321111111123222 465444444446789999987522 345555444331 0 11
Q ss_pred EEEEEccCCcEEEEec--CCEEEEE--eCCCCcEEEEEE
Q 015251 351 RVVCILEKGEILLEYK--SRVLVSY--DPKRRTFNEFVF 385 (410)
Q Consensus 351 ~~~~~~~~g~il~~~~--~~~l~~y--d~~~~~~~~v~~ 385 (410)
.-+++..+|+.++... ++.+..| |.++++++.+..
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 2346667787655543 4666676 788888887763
No 52
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=62.80 E-value=84 Score=27.95 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=63.2
Q ss_pred CCe-EEEEecCCCCCCCceEEEEEcCCceeeEEc-CCCCCCCCCcceEEEE-eCCeEEEEEeCC-CCeEEEEEEeeCCCC
Q 015251 238 KGR-LHWVTRPRRYSPVRGIVSFDIADEQFREVP-KPDCGGLNRCNYHLTV-LSGCLSVAVYGN-YGKLEIWVMKDYNVK 313 (410)
Q Consensus 238 ~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~-lP~~~~~~~~~~~l~~-~~G~L~~~~~~~-~~~l~IW~l~~~~~~ 313 (410)
+|. +|..... .+.|..||+.+.++..+. ++...........+.. -+|+..++.... ...+.||.++.. .
T Consensus 221 dg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~--~ 293 (361)
T 3scy_A 221 DGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET--N 293 (361)
T ss_dssp TSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT--T
T ss_pred CCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC--C
Confidence 565 5544432 367999999877765442 2211110011122332 267755554444 578999999732 2
Q ss_pred CceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEe--cCCEEEE--EeCCCCcEEEEE
Q 015251 314 ESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEY--KSRVLVS--YDPKRRTFNEFV 384 (410)
Q Consensus 314 ~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~--~~~~l~~--yd~~~~~~~~v~ 384 (410)
..+.....+.. + ....-+++..+|+.++.. .++.+.. +|.++++++.+.
T Consensus 294 g~~~~~~~~~~----g------------------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 294 GTLTKVGYQLT----G------------------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CCEEEEEEEEC----S------------------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CcEEEeeEecC----C------------------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 34554444332 0 012235677788865543 3455555 688889887653
No 53
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=62.26 E-value=69 Score=31.43 Aligned_cols=121 Identities=10% Similarity=0.127 Sum_probs=63.3
Q ss_pred CcceEECCeEEEEec-CCCCCCCceEEEEEc-CCc--eeeEEcCCCCCCC------CCcceEEEEeCCeEEEEEeCCCCe
Q 015251 232 PSEALVKGRLHWVTR-PRRYSPVRGIVSFDI-ADE--QFREVPKPDCGGL------NRCNYHLTVLSGCLSVAVYGNYGK 301 (410)
Q Consensus 232 ~~~v~~~G~lyw~~~-~~~~~~~~~Il~fDl-~~e--~~~~i~lP~~~~~------~~~~~~l~~~~G~L~~~~~~~~~~ 301 (410)
..++..+|.+|.... . +.|.++|. .+. .|+. .++..... ......++..+|++++... ..
T Consensus 56 ~~P~v~~g~vyv~~~~~------~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg- 125 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP------NNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA--NG- 125 (571)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TS-
T ss_pred cccEEECCEEEEEeCCC------CEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC--CC-
Confidence 456789999998876 4 68999998 654 4543 32211000 0011234556777655432 22
Q ss_pred EEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------CCEEEEEeC
Q 015251 302 LEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------SRVLVSYDP 375 (410)
Q Consensus 302 l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~yd~ 375 (410)
.|..++-...+..|..... +. +... . ....|+. .+|.+++... ++.++.||.
T Consensus 126 -~l~alD~~tG~~~W~~~~~-~~--~~~~-~---------------~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~ 183 (571)
T 2ad6_A 126 -HLLALDAKTGKINWEVEVC-DP--KVGS-T---------------LTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDL 183 (571)
T ss_dssp -EEEEEETTTCCEEEEEECC-CG--GGTC-B---------------CCSCCEE--ETTEEEEECBCGGGTCCCEEEEEET
T ss_pred -EEEEEECCCCCEEEEecCC-CC--Cccc-e---------------eccCCEE--ECCEEEEEecCCccCCCCEEEEEEC
Confidence 3455653222567875421 00 0000 0 0011222 1455555443 578999999
Q ss_pred CCCcEEEEE
Q 015251 376 KRRTFNEFV 384 (410)
Q Consensus 376 ~~~~~~~v~ 384 (410)
+|++...-.
T Consensus 184 ~tG~~~W~~ 192 (571)
T 2ad6_A 184 KTGELKWRA 192 (571)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEE
Confidence 999876543
No 54
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=60.83 E-value=86 Score=27.44 Aligned_cols=212 Identities=12% Similarity=0.104 Sum_probs=101.5
Q ss_pred ccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccC
Q 015251 125 SCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYP 204 (410)
Q Consensus 125 s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 204 (410)
+.+|-|.+... ....++++|+.+++...+..... ....++.+++.. +++... .... ..
T Consensus 53 ~~~g~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg---~l~v~~--~~~~-~~----------- 110 (333)
T 2dg1_A 53 DRQGQLFLLDV-FEGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDG---RLFVCY--LGDF-KS----------- 110 (333)
T ss_dssp CTTSCEEEEET-TTCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTS---CEEEEE--CTTS-SS-----------
T ss_pred CCCCCEEEEEC-CCCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCC---cEEEEe--CCCC-CC-----------
Confidence 35666654432 34689999999988776532111 235667777653 222221 1100 00
Q ss_pred CceEEEEEeCCCceeec-CCCCceeecCCcceEE--CCeEEEEecCC-CCCCCceEEEEEcCCceeeEEcCCCCCCCCCc
Q 015251 205 RSDVQVYTVGSPAWRSK-GKLAYQFVRRPSEALV--KGRLHWVTRPR-RYSPVRGIVSFDIADEQFREVPKPDCGGLNRC 280 (410)
Q Consensus 205 ~~~~~Vyss~t~~Wr~~-~~~p~~~~~~~~~v~~--~G~lyw~~~~~-~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~ 280 (410)
...+.+|+..++.-+.+ ...... .....+.+ +|.+|...... .......|..+|..+.++..+.-.. . .
T Consensus 111 ~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~-~ 183 (333)
T 2dg1_A 111 TGGIFAATENGDNLQDIIEDLSTA--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI----S-V 183 (333)
T ss_dssp CCEEEEECTTSCSCEEEECSSSSC--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE----S-S
T ss_pred CceEEEEeCCCCEEEEEEccCccC--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC----C-c
Confidence 13567777776654422 111100 00111222 57766554321 0112357999998877665542100 0 0
Q ss_pred ceEEEE-eCCe-EEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccC
Q 015251 281 NYHLTV-LSGC-LSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEK 358 (410)
Q Consensus 281 ~~~l~~-~~G~-L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (410)
...+.. -+|+ |++... ....+.+|-++..+ .........+....+. .....-+++..+
T Consensus 184 ~~~i~~~~dg~~l~v~~~-~~~~i~~~d~~~~g-~~~~~~~~~~~~~~~~------------------~~~~~~i~~d~~ 243 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTET-TANRLHRIALEDDG-VTIQPFGATIPYYFTG------------------HEGPDSCCIDSD 243 (333)
T ss_dssp EEEEEECTTSSEEEEEEG-GGTEEEEEEECTTS-SSEEEEEEEEEEECCS------------------SSEEEEEEEBTT
T ss_pred ccceEECCCCCEEEEEeC-CCCeEEEEEecCCC-cCcccccceEEEecCC------------------CCCCCceEECCC
Confidence 112322 2455 544432 24567666664322 1111111111110000 012233667778
Q ss_pred CcEEEEe-cCCEEEEEeCCCCcEEEEEE
Q 015251 359 GEILLEY-KSRVLVSYDPKRRTFNEFVF 385 (410)
Q Consensus 359 g~il~~~-~~~~l~~yd~~~~~~~~v~~ 385 (410)
|.+++.. .++.|..||++++.++.+..
T Consensus 244 G~l~v~~~~~~~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 244 DNLYVAMYGQGRVLVFNKRGYPIGQILI 271 (333)
T ss_dssp CCEEEEEETTTEEEEECTTSCEEEEEEC
T ss_pred CCEEEEEcCCCEEEEECCCCCEEEEEEc
Confidence 8887765 45789999998777776654
No 55
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=60.34 E-value=83 Score=27.08 Aligned_cols=28 Identities=18% Similarity=0.127 Sum_probs=21.1
Q ss_pred ccCCcEEEEecCCEEEEEeCCCCcEEEE
Q 015251 356 LEKGEILLEYKSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 356 ~~~g~il~~~~~~~l~~yd~~~~~~~~v 383 (410)
..++..++.....+++.++++++++++-
T Consensus 265 ~~d~~~L~v~t~~~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 265 GPEGRTLYMTVSTEFWSIETNVRGLEHH 292 (296)
T ss_dssp STTSCEEEEEETTEEEEEECSCCBCCC-
T ss_pred CCCCCEEEEEcCCeEEEEEccccccccc
Confidence 4567666666667899999999998753
No 56
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=59.61 E-value=98 Score=27.71 Aligned_cols=195 Identities=11% Similarity=0.031 Sum_probs=91.5
Q ss_pred cCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCC
Q 015251 126 CNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPR 205 (410)
Q Consensus 126 ~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 205 (410)
-++.++... ..+.+.|||..|++...........+...+..+.|.|.. .+ ++.. . . .
T Consensus 92 ~d~~l~~~s--~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~-l~sg-s--~----------------d 148 (344)
T 4gqb_B 92 GERGILVAS--DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQ-AVSG-S--K----------------D 148 (344)
T ss_dssp TTTEEEEEE--TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SE-EEEE-E--T----------------T
T ss_pred CCCeEEEEE--CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CE-EEEE-e--C----------------C
Confidence 355555443 356899999998875443321111111345566777643 22 2221 1 1 1
Q ss_pred ceEEEEEeCCCceee-cCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCcc
Q 015251 206 SDVQVYTVGSPAWRS-KGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRCN 281 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~-~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~~ 281 (410)
..+.+++.+++.=.. ...-...+ .++.+ +|.-+.++.. ..+.|..+|+.+.+- ..+..+... ...
T Consensus 149 ~~i~iwd~~~~~~~~~~~~h~~~V----~~~~~~~~~~~~l~s~s----~D~~v~iwd~~~~~~~~~~~~~~~~---~~~ 217 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYRAHAAQV----TCVAASPHKDSVFLSCS----EDNRILLWDTRCPKPASQIGCSAPG---YLP 217 (344)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE----EEEEECSSCTTEEEEEE----TTSCEEEEETTSSSCEEECC----C---CCE
T ss_pred CeEEEEECCCCcEEEEEcCcCCce----EEEEecCCCCCceeeec----cccccccccccccceeeeeecceee---ccc
Confidence 467888887763211 11000000 01111 2221122211 125788899987653 333322211 011
Q ss_pred eEEEEe--CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCC
Q 015251 282 YHLTVL--SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKG 359 (410)
Q Consensus 282 ~~l~~~--~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 359 (410)
..+... ++.+.+... .+..+.||-++.. + ....+... ...+.-+++..+|
T Consensus 218 ~~~~~~p~~~~~l~sg~-~dg~v~~wd~~~~--~----~~~~~~~h---------------------~~~v~~v~fsp~g 269 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGD-ENGTVSLVDTKST--S----CVLSSAVH---------------------SQCVTGLVFSPHS 269 (344)
T ss_dssp EEEEECSSCTTEEEEEE-TTSEEEEEESCC--------CCEEEECC---------------------SSCEEEEEECSSS
T ss_pred eeeeecCCCCcceEEec-cCCcEEEEECCCC--c----EEEEEcCC---------------------CCCEEEEEEccCC
Confidence 122222 345554444 4678999976531 1 11222210 0134456666666
Q ss_pred -cEEEE-ecCCEEEEEeCCCCcEEE
Q 015251 360 -EILLE-YKSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 360 -~il~~-~~~~~l~~yd~~~~~~~~ 382 (410)
.+|.. ..++.+..||.+++++..
T Consensus 270 ~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 270 VPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp SCCEEEEETTSCEEEECTTCCEEEE
T ss_pred CeEEEEEeCCCeEEEEECCCCcEEE
Confidence 44443 456778899999887643
No 57
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=57.92 E-value=55 Score=32.91 Aligned_cols=122 Identities=13% Similarity=0.130 Sum_probs=62.7
Q ss_pred CcceEECCeEEEEecCCCCCCCceEEEEEcCCce--eeEEcCCCCCCC------CCcceEEEEeCCeEEEEEeCCCCeEE
Q 015251 232 PSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ--FREVPKPDCGGL------NRCNYHLTVLSGCLSVAVYGNYGKLE 303 (410)
Q Consensus 232 ~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~--~~~i~lP~~~~~------~~~~~~l~~~~G~L~~~~~~~~~~l~ 303 (410)
..++..+|.+|..+.. +.|.++|..+.+ |+. +++..... ......++..+|+|++... ...
T Consensus 71 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--dg~-- 139 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW------SVVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--DGR-- 139 (677)
T ss_dssp CCCEEETTEEEEECGG------GCEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--TSE--
T ss_pred eCCEEECCEEEEECCC------CeEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcC--CCE--
Confidence 4567899999988765 789999997654 543 22211000 0011234556676655432 233
Q ss_pred EEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------CCEEEEEeCCC
Q 015251 304 IWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------SRVLVSYDPKR 377 (410)
Q Consensus 304 IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~yd~~~ 377 (410)
|..|+-...+..|......+. +... . ....|+. .++.+++... ++.|+.||.+|
T Consensus 140 l~alD~~tG~~~W~~~~~~~~--~~~~-~---------------~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~t 199 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQ--KGSL-T---------------ITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAET 199 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTC--CSSC-B---------------CCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred EEEEECCCCCEEeeecCCcCc--CcCc-c---------------cccCcEE--ECCEEEEEecccccCCCCEEEEEECCC
Confidence 444553222567775321010 0000 0 0011222 1355555432 47899999999
Q ss_pred CcEEEEE
Q 015251 378 RTFNEFV 384 (410)
Q Consensus 378 ~~~~~v~ 384 (410)
++...-.
T Consensus 200 G~~~W~~ 206 (677)
T 1kb0_A 200 GERKWRW 206 (677)
T ss_dssp CCEEEEE
T ss_pred CcEEEEe
Confidence 9876543
No 58
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=57.88 E-value=1.2e+02 Score=28.10 Aligned_cols=115 Identities=10% Similarity=0.020 Sum_probs=58.9
Q ss_pred ECCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCce
Q 015251 237 VKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESW 316 (410)
Q Consensus 237 ~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W 316 (410)
-+|.|||.... ...|..||+.+.+...+..... .... ...-+|...++..... .-.||.++..+ .|
T Consensus 140 ~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~----~~~i-a~~~~g~~l~~~d~~~-~~~I~~~d~~~---~~ 205 (409)
T 3hrp_A 140 GNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFK----GGKP-AVTKDKQRVYSIGWEG-THTVYVYMKAS---GW 205 (409)
T ss_dssp STTEEEEEETT-----TTEEEEEETTTTEEEEEEETCC----BCBC-EECTTSSEEEEEBSST-TCEEEEEEGGG---TT
T ss_pred CCCCEEEEecC-----CCcEEEEECCCCEEEEeeccCC----CCce-eEecCCCcEEEEecCC-CceEEEEEcCC---Cc
Confidence 36899998764 4689999999887766532211 0111 1222444333332212 12677776532 34
Q ss_pred eeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc-CCcEEEEecCCEEEEEeCCCCcEEEE
Q 015251 317 AKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE-KGEILLEYKSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 317 ~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~il~~~~~~~l~~yd~~~~~~~~v 383 (410)
... .+....+.. .. ...-+++.. +|.|++....+.++.||++++..+.+
T Consensus 206 ~~~-~~g~~~~~~----~~-------------~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 206 APT-RIGQLGSTF----SG-------------KIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEE-EEEECCTTS----CS-------------CCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeE-Eeeeccchh----cC-------------CcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 321 121100000 00 111234544 67777755556788888888876555
No 59
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=57.34 E-value=96 Score=26.88 Aligned_cols=204 Identities=10% Similarity=0.059 Sum_probs=98.5
Q ss_pred eccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccccc
Q 015251 124 GSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIY 203 (410)
Q Consensus 124 ~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 203 (410)
...+|-|...+. ....++.+||.|++...+..+ ....++++++..+ -++.. .
T Consensus 21 ~~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~------~~~~~i~~~~dG~--l~v~~----~--------------- 72 (297)
T 3g4e_A 21 EEVSNSLLFVDI-PAKKVCRWDSFTKQVQRVTMD------APVSSVALRQSGG--YVATI----G--------------- 72 (297)
T ss_dssp ETTTTEEEEEET-TTTEEEEEETTTCCEEEEECS------SCEEEEEEBTTSS--EEEEE----T---------------
T ss_pred ECCCCEEEEEEC-CCCEEEEEECCCCcEEEEeCC------CceEEEEECCCCC--EEEEE----C---------------
Confidence 344555555443 356889999999877554332 1245667776543 22221 1
Q ss_pred CCceEEEEEeCCCceeecCCCCce-eecCCcceEE--CCeEEEEecCCC------CCCCceEEEEEcCCceeeEEcCCCC
Q 015251 204 PRSDVQVYTVGSPAWRSKGKLAYQ-FVRRPSEALV--KGRLHWVTRPRR------YSPVRGIVSFDIADEQFREVPKPDC 274 (410)
Q Consensus 204 ~~~~~~Vyss~t~~Wr~~~~~p~~-~~~~~~~v~~--~G~lyw~~~~~~------~~~~~~Il~fDl~~e~~~~i~lP~~ 274 (410)
..+.+|+..+++++.+...+.. .......+.+ +|.+|+-..... ......|..+|.....-....-.
T Consensus 73 --~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~-- 148 (297)
T 3g4e_A 73 --TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV-- 148 (297)
T ss_dssp --TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE--
T ss_pred --CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc--
Confidence 4677888888887765422110 0000112222 688665442211 01345788888764322211100
Q ss_pred CCCCCcceEEEEe-CCe-EEEEEeCCCCeEEEEEEeeCCCCCceeeEEEe-ccCcCcccccccCCcchhhcccCCCceeE
Q 015251 275 GGLNRCNYHLTVL-SGC-LSVAVYGNYGKLEIWVMKDYNVKESWAKELNI-GAYIPKGLKQSLDRPLKIWKNSLNGRVVR 351 (410)
Q Consensus 275 ~~~~~~~~~l~~~-~G~-L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 351 (410)
. ....++.. +|+ |+++.. ....+.+|-++.. .........+ .+ +.. .....
T Consensus 149 ---~-~pngi~~spdg~~lyv~~~-~~~~i~~~~~d~~--~G~~~~~~~~~~~--~~~-----------------~~~p~ 202 (297)
T 3g4e_A 149 ---D-ISNGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQ--TGQISNRRSVYKL--EKE-----------------EQIPD 202 (297)
T ss_dssp ---S-BEEEEEECTTSCEEEEEEG-GGTEEEEEEECTT--TCCEEEEEEEEEC--CGG-----------------GCEEE
T ss_pred ---c-cccceEEcCCCCEEEEecC-CCCcEEEEeccCC--CCcccCcEEEEEC--CCC-----------------CCCCC
Confidence 0 01122222 455 444432 2445555555311 2223221111 11 100 00122
Q ss_pred EEEEccCCcEEEEe-cCCEEEEEeCCCCcE-EEEEE
Q 015251 352 VVCILEKGEILLEY-KSRVLVSYDPKRRTF-NEFVF 385 (410)
Q Consensus 352 ~~~~~~~g~il~~~-~~~~l~~yd~~~~~~-~~v~~ 385 (410)
=+++..+|.+++.. ..+.|..||++++++ ..+..
T Consensus 203 g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 203 GMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp EEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred eeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 34566788888764 456799999996664 44443
No 60
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=56.60 E-value=88 Score=26.22 Aligned_cols=138 Identities=13% Similarity=0.022 Sum_probs=70.7
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCC-C
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGS-P 216 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t-~ 216 (410)
...++++|+.+++...+.... .....+.+.|.. .+-++. .. ..+.+++..+ +
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg-~~l~~~----~~-----------------~~i~~~d~~~~~ 73 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDG-KYLLLN----SE-----------------GLLYRLSLAGDP 73 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTS-SEEEEE----ET-----------------TEEEEEESSSCC
T ss_pred ceeEEEEeCCCCceeeeccCC-----cceEeeEECCCC-CEEEEE----cC-----------------CeEEEEeCCCCC
Confidence 468999999999887665432 223455666653 332221 11 5788899888 7
Q ss_pred ceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEE-eCCeEEEEE
Q 015251 217 AWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTV-LSGCLSVAV 295 (410)
Q Consensus 217 ~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~-~~G~L~~~~ 295 (410)
....+...............-+|......... ......|..+|+.+.+...+..... ...+.- -+|+..++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 74 SPEKVDTGFATICNNDHGISPDGALYAISDKV-EFGKSAIYLLPSTGGTPRLMTKNLP------SYWHGWSPDGKSFTYC 146 (297)
T ss_dssp SCEECCCTTCCCBCSCCEECTTSSEEEEEECT-TTSSCEEEEEETTCCCCEECCSSSS------EEEEEECTTSSEEEEE
T ss_pred CceEeccccccccccceEECCCCCEEEEEEeC-CCCcceEEEEECCCCceEEeecCCC------ccceEECCCCCEEEEE
Confidence 66655422210000111112245433333210 1124678888887766554433211 112222 256544433
Q ss_pred eCCCCeEEEEEEee
Q 015251 296 YGNYGKLEIWVMKD 309 (410)
Q Consensus 296 ~~~~~~l~IW~l~~ 309 (410)
......+.||.++.
T Consensus 147 ~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 147 GIRDQVFDIYSMDI 160 (297)
T ss_dssp EEETTEEEEEEEET
T ss_pred ECCCCceEEEEEEC
Confidence 22356789999874
No 61
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=54.94 E-value=1.1e+02 Score=26.79 Aligned_cols=109 Identities=9% Similarity=-0.007 Sum_probs=62.8
Q ss_pred EECCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCC
Q 015251 236 LVKGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKE 314 (410)
Q Consensus 236 ~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~ 314 (410)
+.++.||--+.. .+.|..+|+++.+- ..+ +|+.. +..-+...+++|+++... .. .+|+.+- .
T Consensus 62 ~~~~~Ly~stG~-----~g~v~~iD~~Tgkv~~~~-l~~~~----FgeGit~~g~~Ly~ltw~-~~--~v~V~D~----~ 124 (268)
T 3nok_A 62 FHQGHFFESTGH-----QGTLRQLSLESAQPVWME-RLGNI----FAEGLASDGERLYQLTWT-EG--LLFTWSG----M 124 (268)
T ss_dssp EETTEEEEEETT-----TTEEEECCSSCSSCSEEE-ECTTC----CEEEEEECSSCEEEEESS-SC--EEEEEET----T
T ss_pred EECCEEEEEcCC-----CCEEEEEECCCCcEEeEE-CCCCc----ceeEEEEeCCEEEEEEcc-CC--EEEEEEC----C
Confidence 446777776655 24599999998765 556 76521 223466677888887643 22 4455553 2
Q ss_pred ceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCc-EEEEecCCEEEEEeCCCCcEE-EEEE
Q 015251 315 SWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGE-ILLEYKSRVLVSYDPKRRTFN-EFVF 385 (410)
Q Consensus 315 ~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~~~~~~l~~yd~~~~~~~-~v~~ 385 (410)
.-.+..+|... +. -| ++..+|. +++..++..|..+|++|.+.. .|..
T Consensus 125 Tl~~~~ti~~~-~e-----------Gw------------GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 125 PPQRERTTRYS-GE-----------GW------------GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTEEEEEEECS-SC-----------CC------------CEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEEEeCC-Cc-----------ee------------EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 23444555541 11 11 2223344 555555778999999986654 3443
No 62
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=54.55 E-value=1.3e+02 Score=27.68 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=21.0
Q ss_pred EECCeEEEEecCCCCCCCceEEEEEcCCc-eeeEEc
Q 015251 236 LVKGRLHWVTRPRRYSPVRGIVSFDIADE-QFREVP 270 (410)
Q Consensus 236 ~~~G~lyw~~~~~~~~~~~~Il~fDl~~e-~~~~i~ 270 (410)
..++.+||.... ...|..+|..+. .-..|.
T Consensus 298 v~~~~lywtd~~-----~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 298 VFEDKVFWTDII-----NEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EETTEEEEEESS-----SCSEEEEESSSCCCCEEEE
T ss_pred EeCCEEEEecCC-----CCeEEEEEcCCCCceEEEe
Confidence 478899999866 478999995443 334443
No 63
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=54.11 E-value=1.1e+02 Score=26.66 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=59.1
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEEe-CCeEEEEEeCC-CCeEEEEEEeeCCCCCc
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTVL-SGCLSVAVYGN-YGKLEIWVMKDYNVKES 315 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~~-~G~L~~~~~~~-~~~l~IW~l~~~~~~~~ 315 (410)
+|.+||.... ...|..+|..+.++..+..+.. .....+... +|+|.+..... ...-.|++++..+ .
T Consensus 55 ~g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~--~- 122 (333)
T 2dg1_A 55 QGQLFLLDVF-----EGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG--D- 122 (333)
T ss_dssp TSCEEEEETT-----TCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS--C-
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC--C-
Confidence 6888887654 3689999999888766532211 112233332 67776655321 0112344444221 1
Q ss_pred eeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec-------CCEEEEEeCCCCcEEEE
Q 015251 316 WAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK-------SRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 316 W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-------~~~l~~yd~~~~~~~~v 383 (410)
... ..+... .. .....-+.+..+|.+++... ...|+.||+++++++.+
T Consensus 123 ~~~-~~~~~~-~~------------------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 123 NLQ-DIIEDL-ST------------------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCE-EEECSS-SS------------------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEE-EEEccC-cc------------------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111 111100 00 01233455666788777654 25788888888777654
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=53.82 E-value=1.1e+02 Score=26.53 Aligned_cols=191 Identities=7% Similarity=0.022 Sum_probs=96.3
Q ss_pred CceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCc
Q 015251 127 NGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRS 206 (410)
Q Consensus 127 ~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (410)
.+.+++... ..+.+.++|+.|++....-.... ... ++.++|..+ + ++.. . .. ..
T Consensus 9 ~~~~~v~~~-~~~~v~~~d~~~~~~~~~~~~~~----~~~-~~~~s~dg~-~-l~~~-~-~~----------------~~ 62 (331)
T 3u4y_A 9 SNFGIVVEQ-HLRRISFFSTDTLEILNQITLGY----DFV-DTAITSDCS-N-VVVT-S-DF----------------CQ 62 (331)
T ss_dssp CCEEEEEEG-GGTEEEEEETTTCCEEEEEECCC----CEE-EEEECSSSC-E-EEEE-E-ST----------------TC
T ss_pred CCEEEEEec-CCCeEEEEeCcccceeeeEEccC----Ccc-eEEEcCCCC-E-EEEE-e-CC----------------CC
Confidence 344444432 35689999999998754322211 233 777877543 2 2222 1 11 14
Q ss_pred eEEEEEeCCCce--eecC--CCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCcc
Q 015251 207 DVQVYTVGSPAW--RSKG--KLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRCN 281 (410)
Q Consensus 207 ~~~Vyss~t~~W--r~~~--~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~~ 281 (410)
.+.+++..++.- +.+. ..|.. .-.+.-+|..-+..... .....|..+|+.+.+. ..++... ..
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~----~~~~s~dg~~l~~~~~~--~~~~~i~v~d~~~~~~~~~~~~~~------~~ 130 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMA----DVDITPDDQFAVTVTGL--NHPFNMQSYSFLKNKFISTIPIPY------DA 130 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCC----CEEECTTSSEEEECCCS--SSSCEEEEEETTTTEEEEEEECCT------TE
T ss_pred eEEEEECCCCceeEEecccCCCCcc----ceEECCCCCEEEEecCC--CCcccEEEEECCCCCeEEEEECCC------Cc
Confidence 788888888764 2221 11111 01112245433343330 0112899999987765 3344322 11
Q ss_pred eEEEE-eCCe-EEEEEeCCCCe-EEEEEEeeCCCCCceee-EEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc
Q 015251 282 YHLTV-LSGC-LSVAVYGNYGK-LEIWVMKDYNVKESWAK-ELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE 357 (410)
Q Consensus 282 ~~l~~-~~G~-L~~~~~~~~~~-l~IW~l~~~~~~~~W~~-~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (410)
..+.. -+|+ |++.... ... +.+|.++..+ ..... ...+.. .....-+.+..
T Consensus 131 ~~~~~spdg~~l~~~~~~-~~~~i~~~~~~~~g--~~~~~~~~~~~~----------------------~~~~~~~~~sp 185 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRS-SANTVRRFKIDADG--VLFDTGQEFISG----------------------GTRPFNITFTP 185 (331)
T ss_dssp EEEEECTTSSCEEEEEET-TTTEEEEEEECTTC--CEEEEEEEEECS----------------------SSSEEEEEECT
T ss_pred cceEECCCCCEEEEEecC-CCceEEEEEECCCC--cEeecCCccccC----------------------CCCccceEECC
Confidence 22333 2565 5544443 445 9999998533 11111 111111 01233456777
Q ss_pred CCcEEE-Ee-cCCEEEEEeCCCCcE
Q 015251 358 KGEILL-EY-KSRVLVSYDPKRRTF 380 (410)
Q Consensus 358 ~g~il~-~~-~~~~l~~yd~~~~~~ 380 (410)
+|+.++ .. .+..+..||+++++.
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcc
Confidence 887444 33 457899999998875
No 65
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=53.71 E-value=1.4e+02 Score=27.55 Aligned_cols=31 Identities=6% Similarity=0.056 Sum_probs=19.9
Q ss_pred EEEEccCCcEEEEecCCEEEEEeCCCCcEEE
Q 015251 352 VVCILEKGEILLEYKSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 352 ~~~~~~~g~il~~~~~~~l~~yd~~~~~~~~ 382 (410)
+.++..+|.+|....++.|..+|+++++.++
T Consensus 405 ~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 405 LNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp EEEECTTSSCEEEECSSEEEECCCC------
T ss_pred EEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 3456778888877677889999999987653
No 66
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=53.20 E-value=1.4e+02 Score=27.39 Aligned_cols=145 Identities=12% Similarity=0.099 Sum_probs=69.2
Q ss_pred CceEEEE--cccccceeeCCCC--CCCCCCceEEEEEE--eCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEE
Q 015251 138 NDAICIY--NPFTRDYIELPKS--MQYPDQEVVFGFGF--HPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVY 211 (410)
Q Consensus 138 ~~~~~V~--NP~T~~~~~LP~~--~~~~~~~~~~~l~~--d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vy 211 (410)
.+.+.|+ ||.++++..+..+ +.........|+++ ++.++.+.++... . ++. ...+++.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~---k---~G~----------~~q~~l~ 161 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG---K---EGE----------FEQYELK 161 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC---S---SSE----------EEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC---C---CCe----------EEEEEEE
Confidence 4566666 9999998888432 10000012334444 7777776666542 1 111 1233344
Q ss_pred EeCCCcee--ecCCCCceeecCCcceEE---CCeEEEEecCCCCCCCceEEEEEcCCce---eeEE---cCCCCCCCCCc
Q 015251 212 TVGSPAWR--SKGKLAYQFVRRPSEALV---KGRLHWVTRPRRYSPVRGIVSFDIADEQ---FREV---PKPDCGGLNRC 280 (410)
Q Consensus 212 ss~t~~Wr--~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~Il~fDl~~e~---~~~i---~lP~~~~~~~~ 280 (410)
+...+... .+..++. .....+..+ .|.||.--+. ..|..||.+-+. -..+ ..+... ...+
T Consensus 162 ~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd------~GIw~~da~p~~~~~~~~v~~~~~g~l~-aDvE 232 (355)
T 3amr_A 162 ADKNGYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEED------EAIWKFSAEPDGGSNGTVIDRADGRHLT-RDIE 232 (355)
T ss_dssp ECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETT------TEEEEEECSTTSCSCCEEEEEBSSSSBC-SCEE
T ss_pred eCCCCcccceEEEEecC--CCCcceEEEcCCCCeEEEeccc------ceEEEEeCCcCCCCCceEEEEecCCccc-cCcc
Confidence 43555442 1211111 112223344 4788876655 569999965221 2333 333221 1222
Q ss_pred ceEEEEe-C--CeEEEEEeCCCCeEEEEEEe
Q 015251 281 NYHLTVL-S--GCLSVAVYGNYGKLEIWVMK 308 (410)
Q Consensus 281 ~~~l~~~-~--G~L~~~~~~~~~~l~IW~l~ 308 (410)
...|..- + |.|.+.+.. ..++.|+-++
T Consensus 233 GLai~~~~~g~gyLivSsQG-~~s~~Vydr~ 262 (355)
T 3amr_A 233 GLTIYYAADGKGYLMASSQG-NSSYAIYDRQ 262 (355)
T ss_dssp EEEEEECGGGCEEEEEEEGG-GTEEEEEESS
T ss_pred eEEEEecCCCCEEEEEEcCC-CCEEEEEECC
Confidence 2333322 2 335444443 5688888775
No 67
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=53.10 E-value=1.1e+02 Score=30.81 Aligned_cols=122 Identities=11% Similarity=0.127 Sum_probs=62.0
Q ss_pred CcceEECCeEEEEecCCCCCCCceEEEEEcCCc--eeeEE-cCCCCCC----CCCcceEEEEeCCeEEEEEeCCCCeEEE
Q 015251 232 PSEALVKGRLHWVTRPRRYSPVRGIVSFDIADE--QFREV-PKPDCGG----LNRCNYHLTVLSGCLSVAVYGNYGKLEI 304 (410)
Q Consensus 232 ~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e--~~~~i-~lP~~~~----~~~~~~~l~~~~G~L~~~~~~~~~~l~I 304 (410)
..++..+|.+|..+.. ..|.++|..+. .|+.- ..+.... .......++..+|++++... ... |
T Consensus 64 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--dg~--l 133 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--DGR--L 133 (689)
T ss_dssp CCCEEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TSE--E
T ss_pred ecCEEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--CCE--E
Confidence 4567899999988765 68999998764 46532 2221000 00011224456676655432 233 3
Q ss_pred EEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------CCEEEEEeCCCC
Q 015251 305 WVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------SRVLVSYDPKRR 378 (410)
Q Consensus 305 W~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~yd~~~~ 378 (410)
..++....+..|......+.. .. ... ...|+. .+|.+++... ++.|+.||.+|+
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~--~~-~~~---------------~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHK--RS-YTI---------------TGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETG 193 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTT--SC-CBC---------------CSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred EEEECCCCCEeeeecCcCCCC--CC-ccc---------------cCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCC
Confidence 444432225678764321110 00 000 011222 1455555432 468999999999
Q ss_pred cEEEE
Q 015251 379 TFNEF 383 (410)
Q Consensus 379 ~~~~v 383 (410)
+...-
T Consensus 194 ~~~W~ 198 (689)
T 1yiq_A 194 KEAWR 198 (689)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 97643
No 68
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=52.59 E-value=1.1e+02 Score=26.21 Aligned_cols=190 Identities=8% Similarity=0.031 Sum_probs=99.3
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
...++++||.++ ...+..+. ....++.+++... ++... .. ...+.+|+..+++
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~-----~~~~~l~~~~dg~---l~v~~--~~----------------~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPS-----HHQNGHCLNKQGH---LIACS--HG----------------LRRLERQREPGGE 101 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSC-----SSEEEEEECTTCC---EEEEE--TT----------------TTEEEEECSTTCC
T ss_pred CCEEEEEECCCC-eEEEECCC-----CCcceeeECCCCc---EEEEe--cC----------------CCeEEEEcCCCCc
Confidence 468899999988 55544322 2346778877432 33221 11 1467888887887
Q ss_pred eeecCCC-CceeecCCcceEE--CCeEEEEecCC------------CCCCCceEEEEEcCCceeeEEcCCCCCCCCCcce
Q 015251 218 WRSKGKL-AYQFVRRPSEALV--KGRLHWVTRPR------------RYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNY 282 (410)
Q Consensus 218 Wr~~~~~-p~~~~~~~~~v~~--~G~lyw~~~~~------------~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~ 282 (410)
.+.+... ..........+.+ +|.+|.-.... .......|..+|.. .++..+.-.. . ...
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~-~~~ 175 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR----V-KPN 175 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC----S-SEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC----C-CCc
Confidence 6654321 1111111122333 67776642110 01123579999987 5554442111 0 111
Q ss_pred EEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCce-eeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCc
Q 015251 283 HLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESW-AKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGE 360 (410)
Q Consensus 283 ~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W-~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 360 (410)
.++. -+|++. +.......+.+|-+++. ... .....+.. .. .. ..-+++..+|.
T Consensus 176 gi~~s~dg~~l-v~~~~~~~i~~~~~~~~---g~~~~~~~~~~~--~~------~~-------------p~~i~~d~~G~ 230 (296)
T 3e5z_A 176 GLAFLPSGNLL-VSDTGDNATHRYCLNAR---GETEYQGVHFTV--EP------GK-------------TDGLRVDAGGL 230 (296)
T ss_dssp EEEECTTSCEE-EEETTTTEEEEEEECSS---SCEEEEEEEECC--SS------SC-------------CCSEEEBTTSC
T ss_pred cEEECCCCCEE-EEeCCCCeEEEEEECCC---CcCcCCCeEeeC--CC------CC-------------CCeEEECCCCC
Confidence 2333 257666 44444567777777632 233 22222211 00 00 11246677888
Q ss_pred EEEEecCCEEEEEeCCCCcEEEEEEe
Q 015251 361 ILLEYKSRVLVSYDPKRRTFNEFVFK 386 (410)
Q Consensus 361 il~~~~~~~l~~yd~~~~~~~~v~~~ 386 (410)
+++.. ...|..||++++.++.+...
T Consensus 231 l~v~~-~~~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 231 IWASA-GDGVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp EEEEE-TTEEEEECTTSCEEEEEECS
T ss_pred EEEEc-CCeEEEECCCCCEEEEEECC
Confidence 88877 67899999998877776643
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=52.27 E-value=1.4e+02 Score=27.10 Aligned_cols=133 Identities=11% Similarity=0.059 Sum_probs=69.1
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
.+.++|||..+++...+-... ....+..+.+.|. +.+-++. . . ...+.+|+..++.
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~-~~~l~~~--~--~----------------dg~i~iwd~~~~~ 167 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETD---ESTYVASVKWSHD-GSFLSVG--L--G----------------NGLVDIYDVESQT 167 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECC---TTCCEEEEEECTT-SSEEEEE--E--T----------------TSCEEEEETTTCC
T ss_pred CCeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCC-CCEEEEE--C--C----------------CCeEEEEECcCCe
Confidence 568999999999876554322 1134566777773 3332222 1 1 1568888888764
Q ss_pred eee-cCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCce--eeEEcCCCCCCCCCcceEEEEe-CCeEEE
Q 015251 218 WRS-KGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ--FREVPKPDCGGLNRCNYHLTVL-SGCLSV 293 (410)
Q Consensus 218 Wr~-~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~--~~~i~lP~~~~~~~~~~~l~~~-~G~L~~ 293 (410)
-.. +..-.. .-..+.++|.+...+.. .+.|..+|+.... ...+.... . ....+... +|.+.+
T Consensus 168 ~~~~~~~~~~----~v~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~--~---~v~~~~~~~~~~~l~ 233 (401)
T 4aez_A 168 KLRTMAGHQA----RVGCLSWNRHVLSSGSR-----SGAIHHHDVRIANHQIGTLQGHS--S---EVCGLAWRSDGLQLA 233 (401)
T ss_dssp EEEEECCCSS----CEEEEEEETTEEEEEET-----TSEEEEEETTSSSCEEEEEECCS--S---CEEEEEECTTSSEEE
T ss_pred EEEEecCCCC----ceEEEEECCCEEEEEcC-----CCCEEEEecccCcceeeEEcCCC--C---CeeEEEEcCCCCEEE
Confidence 322 111111 11123345554444433 3789999997433 22222211 0 11122222 455555
Q ss_pred EEeCCCCeEEEEEEee
Q 015251 294 AVYGNYGKLEIWVMKD 309 (410)
Q Consensus 294 ~~~~~~~~l~IW~l~~ 309 (410)
+.. .+..+.||-+..
T Consensus 234 s~~-~d~~v~iwd~~~ 248 (401)
T 4aez_A 234 SGG-NDNVVQIWDARS 248 (401)
T ss_dssp EEE-TTSCEEEEETTC
T ss_pred EEe-CCCeEEEccCCC
Confidence 544 367899998764
No 70
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=51.31 E-value=1.5e+02 Score=27.28 Aligned_cols=184 Identities=11% Similarity=0.096 Sum_probs=94.3
Q ss_pred ceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCce
Q 015251 139 DAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAW 218 (410)
Q Consensus 139 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~W 218 (410)
..++++|..++....|.... .....+.+.|.. .+ ++.. .... + ...+.+++..+++.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-----~~v~~~~~Spdg-~~-la~~-s~~~----~-----------~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-----QPLMSPAWSPDG-SK-LAYV-TFES----G-----------RSALVIQTLANGAV 215 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-----SCEEEEEECTTS-SE-EEEE-ECTT----S-----------SCEEEEEETTTCCE
T ss_pred ceEEEEcCCCCCCEEEeCCC-----CcceeeEEcCCC-CE-EEEE-EecC----C-----------CcEEEEEECCCCcE
Confidence 68999998876665554321 234556676643 22 2222 1111 1 25788999998877
Q ss_pred eecCCCCceeecCCcceEE--CCe-EEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEE-eCCeEEEE
Q 015251 219 RSKGKLAYQFVRRPSEALV--KGR-LHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTV-LSGCLSVA 294 (410)
Q Consensus 219 r~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~-~~G~L~~~ 294 (410)
+.+...+... .++.+ +|. |.+.... .....|..+|+.+.+...+.... . ....+.- -+|+..++
T Consensus 216 ~~l~~~~~~~----~~~~~spdg~~la~~~~~---~g~~~i~~~d~~~~~~~~l~~~~--~---~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 216 RQVASFPRHN----GAPAFSPDGSKLAFALSK---TGSLNLYVMDLASGQIRQVTDGR--S---NNTEPTWFPDSQNLAF 283 (415)
T ss_dssp EEEECCSSCE----EEEEECTTSSEEEEEECT---TSSCEEEEEETTTCCEEECCCCS--S---CEEEEEECTTSSEEEE
T ss_pred EEeecCCCcc----cCEEEcCCCCEEEEEEec---CCCceEEEEECCCCCEEeCcCCC--C---cccceEECCCCCEEEE
Confidence 6554322111 11111 454 4444432 12346999999887765443211 1 1112222 25664444
Q ss_pred EeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE-ec---CCEE
Q 015251 295 VYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE-YK---SRVL 370 (410)
Q Consensus 295 ~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~---~~~l 370 (410)
.........||.++-.+.. ...+... .....-+.+..+|+.++. .. ...+
T Consensus 284 ~s~~~g~~~i~~~d~~~~~-----~~~l~~~---------------------~~~~~~~~~spdG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNINGGA-----PQRITWE---------------------GSQNQDADVSSDGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp EECTTSSCEEEEEETTSSC-----CEECCCS---------------------SSEEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred EECCCCCcEEEEEECCCCC-----EEEEecC---------------------CCcccCeEECCCCCEEEEEECcCCceEE
Confidence 4333445677777643211 1111110 012334566677875554 22 2478
Q ss_pred EEEeCCCCcEEEE
Q 015251 371 VSYDPKRRTFNEF 383 (410)
Q Consensus 371 ~~yd~~~~~~~~v 383 (410)
..+|+++++.+.+
T Consensus 338 ~~~d~~~~~~~~l 350 (415)
T 2hqs_A 338 AKQDLATGGVQVL 350 (415)
T ss_dssp EEEETTTCCEEEC
T ss_pred EEEECCCCCEEEe
Confidence 9999999887654
No 71
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=51.09 E-value=1.4e+02 Score=29.75 Aligned_cols=122 Identities=11% Similarity=0.138 Sum_probs=62.6
Q ss_pred CcceEECCeEEEEecCCCCCCCceEEEEEcCCc--eeeEE-cCCCCCC----CCCcceEEEEeCCeEEEEEeCCCCeEEE
Q 015251 232 PSEALVKGRLHWVTRPRRYSPVRGIVSFDIADE--QFREV-PKPDCGG----LNRCNYHLTVLSGCLSVAVYGNYGKLEI 304 (410)
Q Consensus 232 ~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e--~~~~i-~lP~~~~----~~~~~~~l~~~~G~L~~~~~~~~~~l~I 304 (410)
..++..+|.+|..+.. ..|.++|..+. .|+.- ..+.... .......++..+|++++... .. .|
T Consensus 60 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg--~l 129 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--DG--RL 129 (668)
T ss_dssp CCCEEETTEEEEEEGG------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--TS--EE
T ss_pred cCCEEECCEEEEECCC------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--CC--EE
Confidence 4567899999998865 78999998764 45532 2221100 00011224455676655432 22 34
Q ss_pred EEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec------CCEEEEEeCCCC
Q 015251 305 WVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK------SRVLVSYDPKRR 378 (410)
Q Consensus 305 W~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~yd~~~~ 378 (410)
..++-...+..|..... +. +... .. ...|+. .++.+++... ++.++.||.+|+
T Consensus 130 ~alD~~tG~~~W~~~~~-~~--~~~~-~~---------------~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTT-DP--AKPY-SI---------------TGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTG 188 (668)
T ss_dssp EEEETTTCCEEEEEECS-CT--TSSC-BC---------------CSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred EEEECCCCCEeeeeccC-CC--CCcc-ee---------------cCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCC
Confidence 45553222667876421 10 0000 00 011221 1455555432 368999999999
Q ss_pred cEEEEE
Q 015251 379 TFNEFV 384 (410)
Q Consensus 379 ~~~~v~ 384 (410)
+...-.
T Consensus 189 ~~~W~~ 194 (668)
T 1kv9_A 189 KLAWRF 194 (668)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 876543
No 72
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=49.90 E-value=1.9e+02 Score=27.98 Aligned_cols=118 Identities=12% Similarity=0.030 Sum_probs=64.7
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceee-EEcCCCCCCCCCcceEEEEeC-CeEEEEEeCCCCeEEEEEEeeCC-CCC
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFR-EVPKPDCGGLNRCNYHLTVLS-GCLSVAVYGNYGKLEIWVMKDYN-VKE 314 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i~lP~~~~~~~~~~~l~~~~-G~L~~~~~~~~~~l~IW~l~~~~-~~~ 314 (410)
+|...+.+.. ..+.|..+|+.+.+.. .++........ ....+..-+ |.+.+.......++.||-++..+ ...
T Consensus 334 dg~~l~va~~----~~~~v~v~D~~tg~l~~~i~~g~~ph~g-~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 334 SHRYFMTAAN----NSNKVAVIDSKDRRLSALVDVGKTPHPG-RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY 408 (543)
T ss_dssp TSCEEEEEEG----GGTEEEEEETTTTEEEEEEECSSSBCCT-TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred CCCEEEEEec----CCCeEEEEECCCCeEEEeeccCCCCCCC-CCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchh
Confidence 5664444332 1368999999988753 34432100000 112332223 55554443346789999987522 124
Q ss_pred ceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEec--------CCEEEEEeCCCCcEE
Q 015251 315 SWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYK--------SRVLVSYDPKRRTFN 381 (410)
Q Consensus 315 ~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~--------~~~l~~yd~~~~~~~ 381 (410)
.|....++...-. ....+.+..+|..++... +..+..||.++.+..
T Consensus 409 ~~~~v~~l~~~g~---------------------~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 409 AWKKVAELQGQGG---------------------GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp BTSEEEEEECSCS---------------------CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cCeEEEEEEcCCC---------------------CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 5988888765200 112345566777666532 457888888877643
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=49.38 E-value=1.4e+02 Score=26.43 Aligned_cols=137 Identities=14% Similarity=0.075 Sum_probs=57.2
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
.+.+.|||..++.+..+-.... ....+..+.+.|.. .+-+.. . . ...+.+|+..++.
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~-~~l~s~--s--~----------------d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKS-NRIVTC--S--Q----------------DRNAYVYEKRPDG 88 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTT-CCEEEE--E--T----------------TSSEEEC------
T ss_pred CCEEEEEEccCCceEEEEEEec--CCceEEEEEEeCCC-CEEEEE--e--C----------------CCeEEEEEcCCCC
Confidence 4578888888875443332221 11345667777753 222211 1 1 1568888888876
Q ss_pred -eeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCce----eeEEcCCCCCCCCCcceEEEEe-CC
Q 015251 218 -WRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQ----FREVPKPDCGGLNRCNYHLTVL-SG 289 (410)
Q Consensus 218 -Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~----~~~i~lP~~~~~~~~~~~l~~~-~G 289 (410)
|.......... ..-..+.+ +|.+...+.. .+.|..+|+.+.+ ...+..|... ....+.-. +|
T Consensus 89 ~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~ 158 (377)
T 3dwl_C 89 TWKQTLVLLRLN-RAATFVRWSPNEDKFAVGSG-----ARVISVCYFEQENDWWVSKHLKRPLRS----TILSLDWHPNN 158 (377)
T ss_dssp CCCCEEECCCCS-SCEEEEECCTTSSCCEEEES-----SSCEEECCC-----CCCCEEECSSCCS----CEEEEEECTTS
T ss_pred ceeeeeEecccC-CceEEEEECCCCCEEEEEec-----CCeEEEEEECCcccceeeeEeecccCC----CeEEEEEcCCC
Confidence 65432111000 00001111 3332222222 2567888887664 2334332111 11122222 45
Q ss_pred eEEEEEeCCCCeEEEEEEe
Q 015251 290 CLSVAVYGNYGKLEIWVMK 308 (410)
Q Consensus 290 ~L~~~~~~~~~~l~IW~l~ 308 (410)
.+.+... .+..+.||-++
T Consensus 159 ~~l~~~~-~d~~i~iwd~~ 176 (377)
T 3dwl_C 159 VLLAAGC-ADRKAYVLSAY 176 (377)
T ss_dssp SEEEEEE-SSSCEEEEEEC
T ss_pred CEEEEEe-CCCEEEEEEEE
Confidence 5544444 35678899875
No 74
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=47.12 E-value=1.6e+02 Score=26.33 Aligned_cols=194 Identities=8% Similarity=0.025 Sum_probs=85.1
Q ss_pred cCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCC
Q 015251 126 CNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPR 205 (410)
Q Consensus 126 ~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 205 (410)
-+|.++... ..+.+.|||..+++...............+..+.+.|.. .+ ++.. . . .
T Consensus 104 ~d~~~l~~s--~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~-l~sg-s--~----------------d 160 (357)
T 4g56_B 104 SEKGILVAS--DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQ-AVSG-G--K----------------D 160 (357)
T ss_dssp TTTEEEEEE--TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SE-EEEE-E--T----------------T
T ss_pred CCCCEEEEE--CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CE-EEEE-e--C----------------C
Confidence 355554443 356799999998876554432211122345667777643 22 2221 1 1 2
Q ss_pred ceEEEEEeCCCceeec-CCCCceeecCCcceEE--CCe-EEEEecCCCCCCCceEEEEEcCCceee-EEcCCCCCCCCCc
Q 015251 206 SDVQVYTVGSPAWRSK-GKLAYQFVRRPSEALV--KGR-LHWVTRPRRYSPVRGIVSFDIADEQFR-EVPKPDCGGLNRC 280 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~-~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i~lP~~~~~~~~ 280 (410)
..+.+++.++++-... ..-...+ .++.+ +|. +...+.. .+.|..+|+.+.+-. .+...... ..
T Consensus 161 g~v~iwd~~~~~~~~~~~~h~~~v----~~v~~s~~~~~~~~s~~~-----dg~v~~wd~~~~~~~~~~~~~~~~---~~ 228 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNAHSSEV----NCVAACPGKDTIFLSCGE-----DGRILLWDTRKPKPATRIDFCASD---TI 228 (357)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE----EEEEECTTCSSCEEEEET-----TSCEEECCTTSSSCBCBCCCTTCC---SC
T ss_pred CeEEEEECCCCcEEEEEcCCCCCE----EEEEEccCCCceeeeecc-----CCceEEEECCCCceeeeeeecccc---cc
Confidence 5678888887643221 1100000 01111 222 1112211 256888888765432 22222111 11
Q ss_pred ceEEEEe--CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccC
Q 015251 281 NYHLTVL--SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEK 358 (410)
Q Consensus 281 ~~~l~~~--~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (410)
...+.-. ++.+.++.. .+..+.||-+.... ....+... ...+.-+++..+
T Consensus 229 v~~v~~sp~~~~~la~g~-~d~~i~~wd~~~~~------~~~~~~~~---------------------~~~v~~l~~sp~ 280 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGD-ETGNVSLVNIKNPD------SAQTSAVH---------------------SQNITGLAYSYH 280 (357)
T ss_dssp EEEEEECTTSTTEEEEEE-SSSCEEEEESSCGG------GCEEECCC---------------------SSCEEEEEECSS
T ss_pred ccchhhhhcccceEEEee-cccceeEEECCCCc------EeEEEecc---------------------ceeEEEEEEcCC
Confidence 1122222 345544443 36789999875421 11222210 013445566555
Q ss_pred C-cEEEE-ecCCEEEEEeCCCCcEEE
Q 015251 359 G-EILLE-YKSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 359 g-~il~~-~~~~~l~~yd~~~~~~~~ 382 (410)
| .+|.. ..++.+..||.++++...
T Consensus 281 ~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 281 SSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp SSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 5 45543 456778899998887543
No 75
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=46.98 E-value=1.4e+02 Score=25.83 Aligned_cols=28 Identities=11% Similarity=0.183 Sum_probs=18.9
Q ss_pred EEEccCCcEEEEecCCEEEEEeCCCCcEEE
Q 015251 353 VCILEKGEILLEYKSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 353 ~~~~~~g~il~~~~~~~l~~yd~~~~~~~~ 382 (410)
+++..+|++++ .. ..+..||+++++...
T Consensus 153 ~~~s~dg~l~~-~~-~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 153 MRAADDGSLYV-AG-PDIYKMDVKTGKYTV 180 (349)
T ss_dssp EEECTTSCEEE-ES-SSEEEECTTTCCEEE
T ss_pred eeECCCCcEEE-cc-CcEEEEeCCCCceec
Confidence 45666788444 33 348999999887654
No 76
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=46.78 E-value=1.4e+02 Score=25.71 Aligned_cols=140 Identities=10% Similarity=0.128 Sum_probs=67.4
Q ss_pred ceEEEEEeCCC--ceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcce-
Q 015251 206 SDVQVYTVGSP--AWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNY- 282 (410)
Q Consensus 206 ~~~~Vyss~t~--~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~- 282 (410)
..+..|+. ++ .|+.-..-.... ....+..+|.++..... ....|++||...+....+.+...........
T Consensus 56 ~~V~~~d~-~G~~~W~~~~~~~~~~--~~~~~~~dG~~lv~~~~----~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAAPAGCEM--QTARILPDGNALVAWCG----HPSTILEVNMKGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp SEEEEECT-TSCEEEEEECCTTCEE--EEEEECTTSCEEEEEES----TTEEEEEECTTSCEEEEEEECCSCSSGGGSCS
T ss_pred CCEEEECC-CCCEEEEEcCCCCccc--cccEECCCCCEEEEecC----CCCEEEEEeCCCCEEEEEeccCCCCccccccc
Confidence 45667777 44 576443111111 11223446766655432 1367899998766544454432110000001
Q ss_pred -EEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcE
Q 015251 283 -HLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEI 361 (410)
Q Consensus 283 -~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 361 (410)
.-...+|.+.++... ...+..|-.+ | +..|.... .- .| . -+....+|.+
T Consensus 129 ~v~~~~~G~~lv~~~~-~~~v~~~d~~--G-~~~w~~~~--~~-~~----------------------~-~~~~~~~g~~ 178 (276)
T 3no2_A 129 QINKNKKGNYLVPLFA-TSEVREIAPN--G-QLLNSVKL--SG-TP----------------------F-SSAFLDNGDC 178 (276)
T ss_dssp CCEECTTSCEEEEETT-TTEEEEECTT--S-CEEEEEEC--SS-CC----------------------C-EEEECTTSCE
T ss_pred CceECCCCCEEEEecC-CCEEEEECCC--C-CEEEEEEC--CC-Cc----------------------c-ceeEcCCCCE
Confidence 112335666554432 4455444432 3 55665432 11 01 0 1223456777
Q ss_pred EEEe-cCCEEEEEeCCCCcEEE
Q 015251 362 LLEY-KSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 362 l~~~-~~~~l~~yd~~~~~~~~ 382 (410)
++.. ...+++.+|++|+++..
T Consensus 179 ~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 179 LVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp EEECBTTSEEEEECTTTCCEEE
T ss_pred EEEeCCCCeEEEEeCcCCcEEE
Confidence 7654 44579999999776644
No 77
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=45.03 E-value=2.2e+02 Score=27.44 Aligned_cols=194 Identities=11% Similarity=0.019 Sum_probs=96.9
Q ss_pred cCceEEEeeccCCceEEEEcccccceee-CCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccC
Q 015251 126 CNGLLCLSDSLFNDAICIYNPFTRDYIE-LPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYP 204 (410)
Q Consensus 126 ~~Gll~l~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 204 (410)
-+|.+++... ..+.+.|+|+.|++... ++... ...++.++|.. .|-.+. . .
T Consensus 147 p~~~~~vs~~-~d~~V~v~D~~t~~~~~~i~~g~------~~~~v~~spdg-~~l~v~--~--~---------------- 198 (543)
T 1nir_A 147 LPNLFSVTLR-DAGQIALVDGDSKKIVKVIDTGY------AVHISRMSASG-RYLLVI--G--R---------------- 198 (543)
T ss_dssp GGGEEEEEEG-GGTEEEEEETTTCCEEEEEECST------TEEEEEECTTS-CEEEEE--E--T----------------
T ss_pred CCCEEEEEEc-CCCeEEEEECCCceEEEEEecCc------ccceEEECCCC-CEEEEE--C--C----------------
Confidence 3666666543 35689999999988653 33211 14466777743 333322 1 1
Q ss_pred CceEEEEEe--CCCce-eecC--CCCceeecCCcceEE----CCe-EEEEecCCCCCCCceEEEEEcCCcee-eEEcCCC
Q 015251 205 RSDVQVYTV--GSPAW-RSKG--KLAYQFVRRPSEALV----KGR-LHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPD 273 (410)
Q Consensus 205 ~~~~~Vyss--~t~~W-r~~~--~~p~~~~~~~~~v~~----~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~ 273 (410)
...+.+|+. .+++- ..+. .-|..+ .+.- +|. +|-.+.. ...|..+|..+.+- ..++.+.
T Consensus 199 d~~V~v~D~~~~t~~~~~~i~~g~~p~~v-----a~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 199 DARIDMIDLWAKEPTKVAEIKIGIEARSV-----ESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp TSEEEEEETTSSSCEEEEEEECCSEEEEE-----EECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCE
T ss_pred CCeEEEEECcCCCCcEEEEEecCCCcceE-----EeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccC
Confidence 146788888 55432 1111 111111 1111 454 4433322 36789999887654 4555532
Q ss_pred CCCC------CCcceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCC
Q 015251 274 CGGL------NRCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLN 346 (410)
Q Consensus 274 ~~~~------~~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~ 346 (410)
.... ......+... +|...++.......+-+|-+.+.. . .+...|.. +
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~--~--l~~~~i~~----~----------------- 323 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID--N--LTVTSIGA----A----------------- 323 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS--S--CEEEEEEC----C-----------------
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC--c--ceeEEecc----C-----------------
Confidence 1100 0011223333 344444544445666666654321 1 11223322 0
Q ss_pred CceeEEEEEccCCcEEEEe--cCCEEEEEeCCCCcEEEE
Q 015251 347 GRVVRVVCILEKGEILLEY--KSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 347 ~~~~~~~~~~~~g~il~~~--~~~~l~~yd~~~~~~~~v 383 (410)
....-+++..+|+.++.. .+..+..+|.+++++...
T Consensus 324 -~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 324 -PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp -SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred -cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 012234666788866543 456888999999887653
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=44.86 E-value=1.8e+02 Score=26.25 Aligned_cols=192 Identities=8% Similarity=0.055 Sum_probs=95.7
Q ss_pred CceEEEEcccccceee-CCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCC
Q 015251 138 NDAICIYNPFTRDYIE-LPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSP 216 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~ 216 (410)
.+.+.|||..+++... +.... .......+.++|.. .+-+.. . . ...+.+|+.+++
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~-~~l~~~--~--~----------------d~~i~iwd~~~~ 208 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDV---HPDTIYSVDWSRDG-ALICTS--C--R----------------DKRVRVIEPRKG 208 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTT---CCSCEEEEEECTTS-SCEEEE--E--T----------------TSEEEEEETTTT
T ss_pred CCEEEEEECCCCCccEEEecCC---CCCceEEEEECCCC-CEEEEE--e--c----------------CCcEEEEeCCCC
Confidence 5679999998887653 32111 11345667777743 322221 1 1 257889998876
Q ss_pred ceeecC-CCCceeecCCcceE-ECCeEEEEecCCCCCCCceEEEEEcCCce--eeEEcCCCCCCCCCcceEEE-EeCCeE
Q 015251 217 AWRSKG-KLAYQFVRRPSEAL-VKGRLHWVTRPRRYSPVRGIVSFDIADEQ--FREVPKPDCGGLNRCNYHLT-VLSGCL 291 (410)
Q Consensus 217 ~Wr~~~-~~p~~~~~~~~~v~-~~G~lyw~~~~~~~~~~~~Il~fDl~~e~--~~~i~lP~~~~~~~~~~~l~-~~~G~L 291 (410)
.-...- ...... .....++ -+|.+...... ....+.|..+|+.+.+ .....++.... ...+. .-+|..
T Consensus 209 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~g~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~ 281 (402)
T 2aq5_A 209 TVVAEKDRPHEGT-RPVHAVFVSEGKILTTGFS--RMSERQVALWDTKHLEEPLSLQELDTSSG----VLLPFFDPDTNI 281 (402)
T ss_dssp EEEEEEECSSCSS-SCCEEEECSTTEEEEEEEC--TTCCEEEEEEETTBCSSCSEEEECCCCSS----CEEEEEETTTTE
T ss_pred ceeeeeccCCCCC-cceEEEEcCCCcEEEEecc--CCCCceEEEEcCccccCCceEEeccCCCc----eeEEEEcCCCCE
Confidence 432211 000000 0011111 14554444410 0123789999998743 22333332111 12222 235665
Q ss_pred EEEEeCCCCeEEEEEEeeCCCCCceeeE-EEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEecCCEE
Q 015251 292 SVAVYGNYGKLEIWVMKDYNVKESWAKE-LNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYKSRVL 370 (410)
Q Consensus 292 ~~~~~~~~~~l~IW~l~~~~~~~~W~~~-~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l 370 (410)
.++....+..+.||.++... .+... ..... ...+.-+++..++.+++. .++.+
T Consensus 282 l~~~g~~dg~i~i~d~~~~~---~~~~~l~~~~~----------------------~~~v~~~~~sp~~~~~~s-~~~~~ 335 (402)
T 2aq5_A 282 VYLCGKGDSSIRYFEITSEA---PFLHYLSMFSS----------------------KESQRGMGYMPKRGLEVN-KCEIA 335 (402)
T ss_dssp EEEEETTCSCEEEEEECSST---TCEEEEEEECC----------------------SSCCSEEEECCGGGSCGG-GTEEE
T ss_pred EEEEEcCCCeEEEEEecCCC---cceEeeccccc----------------------CCcccceEEeccccccee-cceeE
Confidence 55555457789999997522 22221 11110 012334556566665443 44567
Q ss_pred EEEeCCCCcEEEEEEe
Q 015251 371 VSYDPKRRTFNEFVFK 386 (410)
Q Consensus 371 ~~yd~~~~~~~~v~~~ 386 (410)
..|++.+++.+.+.+.
T Consensus 336 ~~~~l~~~~~~~i~~~ 351 (402)
T 2aq5_A 336 RFYKLHERKCEPIAMT 351 (402)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEEEcCCCcEEEEEEE
Confidence 8899999988887654
No 79
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=44.47 E-value=2.4e+02 Score=27.62 Aligned_cols=78 Identities=10% Similarity=0.076 Sum_probs=42.6
Q ss_pred CcceEECCeEEEEecCCCCCCCceEEEEEcCCc--eeeEE-cCCCCCCCC--CcceEEEEeCCeEEEEEeCCCCeEEEEE
Q 015251 232 PSEALVKGRLHWVTRPRRYSPVRGIVSFDIADE--QFREV-PKPDCGGLN--RCNYHLTVLSGCLSVAVYGNYGKLEIWV 306 (410)
Q Consensus 232 ~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e--~~~~i-~lP~~~~~~--~~~~~l~~~~G~L~~~~~~~~~~l~IW~ 306 (410)
..++..+|.+|..... +.|.++|.++. .|+.- ..|...... .....++..+|++++... .. .|..
T Consensus 62 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--dg--~l~A 131 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--DA--SVVA 131 (582)
T ss_dssp CCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--TT--EEEE
T ss_pred eccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--CC--EEEE
Confidence 4567899999998864 35999999764 46542 222211000 001223456777665432 22 3455
Q ss_pred EeeCCCCCceeeE
Q 015251 307 MKDYNVKESWAKE 319 (410)
Q Consensus 307 l~~~~~~~~W~~~ 319 (410)
|+-...+..|...
T Consensus 132 lD~~TG~~~W~~~ 144 (582)
T 1flg_A 132 LNKNTGKVVWKKK 144 (582)
T ss_dssp EESSSCCEEEEEE
T ss_pred EECCCCCEEeeec
Confidence 6532226678754
No 80
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=42.77 E-value=67 Score=24.29 Aligned_cols=39 Identities=15% Similarity=0.432 Sum_probs=29.0
Q ss_pred ceEEEEccccc-ceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEE
Q 015251 139 DAICIYNPFTR-DYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKI 183 (410)
Q Consensus 139 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~ 183 (410)
-.+++.||.|+ .|+..-.. ...+.+.+|+..+.|+|+.+
T Consensus 11 A~V~~~D~~tk~~W~p~g~~------~~~V~~~~d~~~~~yRIv~~ 50 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKH------AVTVSYFYDSTRNVYRIISL 50 (120)
T ss_dssp EEEEEECTTTSCSEEESCSS------CEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCC------ceEEEEEEcCCCCEEEEEEc
Confidence 37889999996 88643322 24567888988888999885
No 81
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=42.45 E-value=2.8e+02 Score=27.95 Aligned_cols=200 Identities=11% Similarity=0.079 Sum_probs=98.9
Q ss_pred CceEEEeeccCCceEEEEcccccceeeCCCCC-----CCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccc
Q 015251 127 NGLLCLSDSLFNDAICIYNPFTRDYIELPKSM-----QYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRV 201 (410)
Q Consensus 127 ~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~-----~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 201 (410)
+|-|-+.. ....+..+||.++.+..+...+ ..-....+.++..|... . +.+...
T Consensus 323 ~g~lWigt--~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~---lWigt~--------------- 381 (781)
T 3v9f_A 323 FNNIWIGT--WGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K---LWIGTD--------------- 381 (781)
T ss_dssp SCCEEEEE--BSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-C---EEEEEB---------------
T ss_pred CCCEEEEe--cCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-C---EEEEeC---------------
Confidence 44443332 2457888899888776664321 10011234455555431 1 222110
Q ss_pred ccCCceEEEEEeCCCceeecCCCCceee-cCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCC
Q 015251 202 IYPRSDVQVYTVGSPAWRSKGKLAYQFV-RRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLN 278 (410)
Q Consensus 202 ~~~~~~~~Vyss~t~~Wr~~~~~p~~~~-~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~ 278 (410)
...+..|+..++.++.... +.... ..-.+++. +|.| |+... ...|..||..++++..+..+. .. .
T Consensus 382 ---~~Gl~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~l-Wigt~-----~~Gl~~~~~~~~~~~~~~~~~-~~-~ 449 (781)
T 3v9f_A 382 ---GGGINVFENGKRVAIYNKE-NRELLSNSVLCSLKDSEGNL-WFGTY-----LGNISYYNTRLKKFQIIELEK-NE-L 449 (781)
T ss_dssp ---SSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCE-EEEET-----TEEEEEECSSSCEEEECCSTT-TC-C
T ss_pred ---CCcEEEEECCCCeEEEccC-CCCCCCcceEEEEECCCCCE-EEEec-----cCCEEEEcCCCCcEEEeccCC-CC-C
Confidence 1345667766666554321 11100 01112333 4555 55433 267999999999998776431 11 1
Q ss_pred CcceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc
Q 015251 279 RCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE 357 (410)
Q Consensus 279 ~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (410)
.....+.+- +|.|.+... .. |+.++.. ...|........ .. .....+.-+....
T Consensus 450 ~~v~~i~~d~~g~lwigt~---~G--l~~~~~~--~~~~~~~~~~~~---~~---------------~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTH---AG--VFVIDLA--SKKVIHHYDTSN---SQ---------------LLENFVRSIAQDS 504 (781)
T ss_dssp CCEEEEEECTTSEEEEEET---TE--EEEEESS--SSSCCEEECTTT---SS---------------CSCSCEEEEEECT
T ss_pred CeEEEEEECCCCCEEEEEC---Cc--eEEEeCC--CCeEEecccCcc---cc---------------cccceeEEEEEcC
Confidence 112234333 466655432 33 3344321 234544321110 00 0012345566677
Q ss_pred CCcEEEEecCCEEEEEeCCCCcEEEEE
Q 015251 358 KGEILLEYKSRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 358 ~g~il~~~~~~~l~~yd~~~~~~~~v~ 384 (410)
+|.+++.....+|+.||+++++++.+.
T Consensus 505 ~g~lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 505 EGRFWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp TCCEEEEESSSCEEEECTTCCEEEEEC
T ss_pred CCCEEEEEcCCCEEEEeCCCCeEEEcc
Confidence 889998887667999999999887754
No 82
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=42.30 E-value=1.7e+02 Score=25.24 Aligned_cols=142 Identities=13% Similarity=0.168 Sum_probs=73.6
Q ss_pred ceEEEEEeCCC--ceeecCCC---CceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCc
Q 015251 206 SDVQVYTVGSP--AWRSKGKL---AYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRC 280 (410)
Q Consensus 206 ~~~~Vyss~t~--~Wr~~~~~---p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~ 280 (410)
..+.+++..++ .|+.-..- +... .+.-+|.++. +.. ..|..||...+.-..+..|... .
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~-----~~~pdG~ilv-s~~------~~V~~~d~~G~~~W~~~~~~~~----~ 78 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSV-----AATKAGEILF-SYS------KGAKMITRDGRELWNIAAPAGC----E 78 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEE-----EECTTSCEEE-ECB------SEEEEECTTSCEEEEEECCTTC----E
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCe-----EECCCCCEEE-eCC------CCEEEECCCCCEEEEEcCCCCc----c
Confidence 57788888777 68754321 1111 2233777766 433 6799999955444445554211 1
Q ss_pred ceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCC
Q 015251 281 NYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKG 359 (410)
Q Consensus 281 ~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 359 (410)
...... -+|.+.+..... .-.|+.++..| +..|.... ....+. +.. ....+.+..+|
T Consensus 79 ~~~~~~~~dG~~lv~~~~~--~~~v~~vd~~G-k~l~~~~~--~~~~~~--------~~~---------~~~~v~~~~~G 136 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGH--PSTILEVNMKG-EVLSKTEF--ETGIER--------PHA---------QFRQINKNKKG 136 (276)
T ss_dssp EEEEEECTTSCEEEEEEST--TEEEEEECTTS-CEEEEEEE--CCSCSS--------GGG---------SCSCCEECTTS
T ss_pred ccccEECCCCCEEEEecCC--CCEEEEEeCCC-CEEEEEec--cCCCCc--------ccc---------cccCceECCCC
Confidence 112222 367776664431 34567776433 44455432 211000 000 11122445678
Q ss_pred cEEEEe-cCCEEEEEeCCCCcEEEEEE
Q 015251 360 EILLEY-KSRVLVSYDPKRRTFNEFVF 385 (410)
Q Consensus 360 ~il~~~-~~~~l~~yd~~~~~~~~v~~ 385 (410)
++++.. .++.++.||++.+.+.++..
T Consensus 137 ~~lv~~~~~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEEEEC
T ss_pred CEEEEecCCCEEEEECCCCCEEEEEEC
Confidence 877654 46789999999555444443
No 83
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=41.55 E-value=1.7e+02 Score=25.09 Aligned_cols=195 Identities=8% Similarity=0.048 Sum_probs=94.0
Q ss_pred ccCceEEEeeccCCceEEEEcccccceeeC-CCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccccc
Q 015251 125 SCNGLLCLSDSLFNDAICIYNPFTRDYIEL-PKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIY 203 (410)
Q Consensus 125 s~~Gll~l~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 203 (410)
+.+|-+++... .+.+.|||..+++.... ..............+.+.|.. .+-++. . .
T Consensus 60 ~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~--~--~--------------- 117 (337)
T 1gxr_A 60 SNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVG--G--E--------------- 117 (337)
T ss_dssp CSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEE--E--S---------------
T ss_pred ecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEE--c--C---------------
Confidence 34554444432 56788998877653221 111100112345667777743 222221 1 1
Q ss_pred CCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCc
Q 015251 204 PRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRC 280 (410)
Q Consensus 204 ~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~ 280 (410)
...+.+|+..++............ ..-..+.+ +|.+...... .+.|..+|+.+.+. ..+.... ..
T Consensus 118 -d~~i~~~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~-----dg~v~~~d~~~~~~~~~~~~~~-----~~ 185 (337)
T 1gxr_A 118 -ASTLSIWDLAAPTPRIKAELTSSA-PACYALAISPDSKVCFSCCS-----DGNIAVWDLHNQTLVRQFQGHT-----DG 185 (337)
T ss_dssp -SSEEEEEECCCC--EEEEEEECSS-SCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEECCCS-----SC
T ss_pred -CCcEEEEECCCCCcceeeecccCC-CceEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCceeeeeeccc-----Cc
Confidence 257889999888754332110000 00001111 4444333333 26789999987654 2333221 01
Q ss_pred ceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCC
Q 015251 281 NYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKG 359 (410)
Q Consensus 281 ~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 359 (410)
...+... +|...++.. .+..+.+|-++.. .....+... ..+.-+.+..+|
T Consensus 186 i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~------~~~~~~~~~----------------------~~v~~~~~s~~~ 236 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGG-LDNTVRSWDLREG------RQLQQHDFT----------------------SQIFSLGYCPTG 236 (337)
T ss_dssp EEEEEECTTSSEEEEEE-TTSEEEEEETTTT------EEEEEEECS----------------------SCEEEEEECTTS
T ss_pred eEEEEECCCCCEEEEEe-cCCcEEEEECCCC------ceEeeecCC----------------------CceEEEEECCCC
Confidence 1222222 565555544 3678999977541 122222210 123345566667
Q ss_pred cEEEE-ecCCEEEEEeCCCCcEEE
Q 015251 360 EILLE-YKSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 360 ~il~~-~~~~~l~~yd~~~~~~~~ 382 (410)
+.++. ..++.+..||.++++...
T Consensus 237 ~~l~~~~~~~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNKPDKYQ 260 (337)
T ss_dssp SEEEEEETTSCEEEEETTSSCEEE
T ss_pred CEEEEEcCCCcEEEEECCCCCeEE
Confidence 66554 456778888988877543
No 84
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=41.49 E-value=1.9e+02 Score=28.59 Aligned_cols=31 Identities=13% Similarity=0.325 Sum_probs=23.5
Q ss_pred CcceEECCeEEEEec-CCCCCCCceEEEEEc-CCc--eeeE
Q 015251 232 PSEALVKGRLHWVTR-PRRYSPVRGIVSFDI-ADE--QFRE 268 (410)
Q Consensus 232 ~~~v~~~G~lyw~~~-~~~~~~~~~Il~fDl-~~e--~~~~ 268 (410)
..++..+|.+|.... . +.|.++|. .+. .|+.
T Consensus 56 ~tP~v~~g~vyv~~~~~------~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP------NNTFALGLDDPGTILWQD 90 (599)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEE
T ss_pred eccEEECCEEEEEeCCC------CEEEEEeCCCCCcEEEEE
Confidence 456789999998876 4 68999999 654 4554
No 85
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=39.85 E-value=3.3e+02 Score=27.93 Aligned_cols=24 Identities=13% Similarity=0.242 Sum_probs=18.9
Q ss_pred EECCeEEEEecCCCCCCCceEEEEEcCCc
Q 015251 236 LVKGRLHWVTRPRRYSPVRGIVSFDIADE 264 (410)
Q Consensus 236 ~~~G~lyw~~~~~~~~~~~~Il~fDl~~e 264 (410)
+.++.|||.... .+.|..+|..+.
T Consensus 610 v~~~~lYwtD~~-----~~~I~~~dk~tG 633 (791)
T 3m0c_C 610 VFEDKVFWTDII-----NEAIFSANRLTG 633 (791)
T ss_dssp EETTEEEEEETT-----TTEEEEEETTTC
T ss_pred EeCCEEEEEECC-----CCEEEEEeCCCC
Confidence 468899999876 478999996554
No 86
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=39.52 E-value=1.7e+02 Score=24.60 Aligned_cols=198 Identities=10% Similarity=0.000 Sum_probs=97.9
Q ss_pred EEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccc
Q 015251 122 AVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRV 201 (410)
Q Consensus 122 ~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 201 (410)
+....+|-+.+... ....++++||. ++...+..+.. .....++.+++.. ++... . ..
T Consensus 62 i~~~~~g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~~~~g---~l~v~-~-~~------------- 118 (299)
T 2z2n_A 62 LTISSDGEVWFTEN-AANKIGRITKK-GIIKEYTLPNP---DSAPYGITEGPNG---DIWFT-E-MN------------- 118 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTS---CEEEE-E-TT-------------
T ss_pred EEECCCCCEEEeCC-CCCeEEEECCC-CcEEEEeCCCc---CCCceeeEECCCC---CEEEE-e-cC-------------
Confidence 44445777666542 24578999986 44443332111 1245667777642 22221 1 00
Q ss_pred ccCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCC
Q 015251 202 IYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNR 279 (410)
Q Consensus 202 ~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~ 279 (410)
...+.+|+. ++........... ....++.. +|.+|+.... ...|..||. +.++..+.+|....
T Consensus 119 ---~~~i~~~d~-~g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~--- 183 (299)
T 2z2n_A 119 ---GNRIGRITD-DGKIREYELPNKG--SYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTPAS--- 183 (299)
T ss_dssp ---TTEEEEECT-TCCEEEEECSSTT--CCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTC---
T ss_pred ---CceEEEECC-CCCEEEecCCCCC--CCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCCCC---
Confidence 135556665 5544433211000 01112333 5777765543 368999999 77777666653211
Q ss_pred cceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccC
Q 015251 280 CNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEK 358 (410)
Q Consensus 280 ~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (410)
....+..- +|.|++.... ...+.+|-. . ..... +.. +.. .....-+++..+
T Consensus 184 ~~~~i~~~~~g~l~v~~~~-~~~i~~~~~--~---g~~~~---~~~--~~~-----------------~~~~~~i~~~~~ 235 (299)
T 2z2n_A 184 GPVGITKGNDDALWFVEII-GNKIGRITT--S---GEITE---FKI--PTP-----------------NARPHAITAGAG 235 (299)
T ss_dssp CEEEEEECTTSSEEEEETT-TTEEEEECT--T---CCEEE---EEC--SST-----------------TCCEEEEEECST
T ss_pred cceeEEECCCCCEEEEccC-CceEEEECC--C---CcEEE---EEC--CCC-----------------CCCceeEEECCC
Confidence 12233332 5776655432 334444432 1 12221 211 100 012334566677
Q ss_pred CcEEEEe-cCCEEEEEeCCCCcEEEEEEe
Q 015251 359 GEILLEY-KSRVLVSYDPKRRTFNEFVFK 386 (410)
Q Consensus 359 g~il~~~-~~~~l~~yd~~~~~~~~v~~~ 386 (410)
|.+++.. ....|..||+ +++++.+.+.
T Consensus 236 g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp TCEEEEETTTTEEEEEET-TTEEEEEECS
T ss_pred CCEEEeccCCceEEEECC-CCceEEEeCC
Confidence 8877765 4578999999 5677666544
No 87
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=39.43 E-value=1.7e+02 Score=24.65 Aligned_cols=206 Identities=16% Similarity=0.130 Sum_probs=102.5
Q ss_pred EEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCC-CCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccc
Q 015251 122 AVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYP-DQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRR 200 (410)
Q Consensus 122 ~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~-~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 200 (410)
+.-+.+|-+.+... ....+.++|+..+....++...... ......++.+++..+ +++.... ..
T Consensus 35 v~~~~~g~l~v~~~-~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g--~l~v~~~-~~------------ 98 (286)
T 1q7f_A 35 VAVNAQNDIIVADT-NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG--DIIVTER-SP------------ 98 (286)
T ss_dssp EEECTTCCEEEEEG-GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT--EEEEEEC-GG------------
T ss_pred EEECCCCCEEEEEC-CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC--eEEEEcC-CC------------
Confidence 33345666655543 3457899998866655665422111 112456677754333 2322210 00
Q ss_pred cccCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCC
Q 015251 201 VIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLN 278 (410)
Q Consensus 201 ~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~ 278 (410)
...+.+|+.....-+.+...... ...++.+ +|.+|..... ...|..||...+....+..+... .
T Consensus 99 ----~~~i~~~d~~g~~~~~~~~~~~~---~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~--~ 164 (286)
T 1q7f_A 99 ----THQIQIYNQYGQFVRKFGATILQ---HPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHL--E 164 (286)
T ss_dssp ----GCEEEEECTTSCEEEEECTTTCS---CEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTC--S
T ss_pred ----CCEEEEECCCCcEEEEecCccCC---CceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCcc--C
Confidence 14567777333222222211100 0112333 6777665543 36899999887766666443211 1
Q ss_pred CcceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc
Q 015251 279 RCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE 357 (410)
Q Consensus 279 ~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (410)
....++.- +|.|++.... ...+.+|-.+ + ... ..+... +. + ....-+++..
T Consensus 165 -~p~~i~~~~~g~l~v~~~~-~~~i~~~~~~--g---~~~--~~~~~~---g~---~-------------~~p~~i~~d~ 216 (286)
T 1q7f_A 165 -FPNGVVVNDKQEIFISDNR-AHCVKVFNYE--G---QYL--RQIGGE---GI---T-------------NYPIGVGINS 216 (286)
T ss_dssp -SEEEEEECSSSEEEEEEGG-GTEEEEEETT--C---CEE--EEESCT---TT---S-------------CSEEEEEECT
T ss_pred -CcEEEEECCCCCEEEEECC-CCEEEEEcCC--C---CEE--EEEccC---Cc---c-------------CCCcEEEECC
Confidence 12233333 5776665432 4567666532 1 121 122210 00 0 0123456677
Q ss_pred CCcEEEEec-CC-EEEEEeCCCCcEEEEEE
Q 015251 358 KGEILLEYK-SR-VLVSYDPKRRTFNEFVF 385 (410)
Q Consensus 358 ~g~il~~~~-~~-~l~~yd~~~~~~~~v~~ 385 (410)
+|.+++... +. .|..||.+++.++.+..
T Consensus 217 ~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 217 NGEILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp TCCEEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 888887654 33 89999998877776654
No 88
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=39.18 E-value=3e+02 Score=27.28 Aligned_cols=143 Identities=17% Similarity=0.111 Sum_probs=73.1
Q ss_pred ceEEEEcccccce--eeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCC
Q 015251 139 DAICIYNPFTRDY--IELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSP 216 (410)
Q Consensus 139 ~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~ 216 (410)
..+++++.-|++. ..+-..+... ....+..+.|. +.|-++.... .. + ...+.+++..++
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~--~~~~~~~~SpD-G~~l~~~~~~--~~---~-----------~~~l~~~~~~~~ 262 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDP--TTFLQSDLSRD-GKYLFVYILR--GW---S-----------ENDVYWKRPGEK 262 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCT--TCEEEEEECTT-SCCEEEEEEE--TT---T-----------EEEEEEECTTCS
T ss_pred CEEEEEECCCCchhceEEEecCCCC--EEEEEEEECCC-CCEEEEEEeC--CC---C-----------ceEEEEEcCCCC
Confidence 3589999888763 2222211111 23345566654 3555444321 10 0 135555555566
Q ss_pred ceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCce---eeEEcCCCCCCCCCcceEEEEeCCeEEE
Q 015251 217 AWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ---FREVPKPDCGGLNRCNYHLTVLSGCLSV 293 (410)
Q Consensus 217 ~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~---~~~i~lP~~~~~~~~~~~l~~~~G~L~~ 293 (410)
.|+.+...... ....+..+|.+|..+.. ......|+.+|+.+.. |..+-.+... ..-..+...+|.|.+
T Consensus 263 ~~~~l~~~~~~---~~~~~~~~g~l~~~s~~--~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~l~~~~~~~~~lv~ 334 (695)
T 2bkl_A 263 DFRLLVKGVGA---KYEVHAWKDRFYVLTDE--GAPRQRVFEVDPAKPARASWKEIVPEDSS---ASLLSVSIVGGHLSL 334 (695)
T ss_dssp SCEEEEECSSC---CEEEEEETTEEEEEECT--TCTTCEEEEEBTTBCSGGGCEEEECCCSS---CEEEEEEEETTEEEE
T ss_pred ceEEeecCCCc---eEEEEecCCcEEEEECC--CCCCCEEEEEeCCCCCccCCeEEecCCCC---CeEEEEEEECCEEEE
Confidence 78776421111 11223356666666542 2234789999997654 6655333211 111223344788766
Q ss_pred EEeCCCCeEEEEEEee
Q 015251 294 AVYGNYGKLEIWVMKD 309 (410)
Q Consensus 294 ~~~~~~~~l~IW~l~~ 309 (410)
.... .....||+++-
T Consensus 335 ~~~~-dg~~~l~~~~~ 349 (695)
T 2bkl_A 335 EYLK-DATSEVRVATL 349 (695)
T ss_dssp EEEE-TTEEEEEEEET
T ss_pred EEEE-CCEEEEEEEeC
Confidence 6543 56788998873
No 89
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=39.03 E-value=2.3e+02 Score=25.94 Aligned_cols=184 Identities=12% Similarity=0.039 Sum_probs=92.2
Q ss_pred ceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCce
Q 015251 139 DAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAW 218 (410)
Q Consensus 139 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~W 218 (410)
..++++|..|++...+.... .....+.+.|.. .+-++.. . .. + ...+.+++..++..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-----~~~~~~~~spdg-~~la~~~-~-~~----g-----------~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-----RHNGAPAFSPDG-SKLAFAL-S-KT----G-----------SLNLYVMDLASGQI 259 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-----SCEEEEEECTTS-SEEEEEE-C-TT----S-----------SCEEEEEETTTCCE
T ss_pred cEEEEEECCCCcEEEeecCC-----CcccCEEEcCCC-CEEEEEE-e-cC----C-----------CceEEEEECCCCCE
Confidence 48999999999887665432 234556777643 3322221 1 11 1 25688889888877
Q ss_pred eecCCCCceeecCCcceEE--CCe-EEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEE-eCCeEEEE
Q 015251 219 RSKGKLAYQFVRRPSEALV--KGR-LHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTV-LSGCLSVA 294 (410)
Q Consensus 219 r~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~-~~G~L~~~ 294 (410)
+.+....... ..+.+ +|. |+..... .....|..+|+.+.+...+.... .....+.- -+|+..++
T Consensus 260 ~~l~~~~~~~----~~~~~spdg~~l~~~s~~---~g~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 260 RQVTDGRSNN----TEPTWFPDSQNLAFTSDQ---AGRPQVYKVNINGGAPQRITWEG-----SQNQDADVSSDGKFMVM 327 (415)
T ss_dssp EECCCCSSCE----EEEEECTTSSEEEEEECT---TSSCEEEEEETTSSCCEECCCSS-----SEEEEEEECTTSSEEEE
T ss_pred EeCcCCCCcc----cceEECCCCCEEEEEECC---CCCcEEEEEECCCCCEEEEecCC-----CcccCeEECCCCCEEEE
Confidence 6554322111 11111 454 4444432 12247888999887654443221 01112222 25654444
Q ss_pred EeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE-ecCC---EE
Q 015251 295 VYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE-YKSR---VL 370 (410)
Q Consensus 295 ~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~~~---~l 370 (410)
.........||+++-.. .... .+... .....+.+..+|+.++. ..++ .|
T Consensus 328 ~~~~~g~~~i~~~d~~~--~~~~---~l~~~----------------------~~~~~~~~spdg~~l~~~s~~~~~~~l 380 (415)
T 2hqs_A 328 VSSNGGQQHIAKQDLAT--GGVQ---VLSST----------------------FLDETPSLAPNGTMVIYSSSQGMGSVL 380 (415)
T ss_dssp EEECSSCEEEEEEETTT--CCEE---ECCCS----------------------SSCEEEEECTTSSEEEEEEEETTEEEE
T ss_pred EECcCCceEEEEEECCC--CCEE---EecCC----------------------CCcCCeEEcCCCCEEEEEEcCCCccEE
Confidence 33222234444444221 1121 11110 01234566778875543 3333 79
Q ss_pred EEEeCCCCcEEEEE
Q 015251 371 VSYDPKRRTFNEFV 384 (410)
Q Consensus 371 ~~yd~~~~~~~~v~ 384 (410)
+.+|++++..+.+.
T Consensus 381 ~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 381 NLVSTDGRFKARLP 394 (415)
T ss_dssp EEEETTSCCEEECC
T ss_pred EEEECCCCcEEEee
Confidence 99999988877653
No 90
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=39.00 E-value=92 Score=27.05 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=17.0
Q ss_pred EEEccCCcEEEEecCCEEEEEeCCCCcEEE
Q 015251 353 VCILEKGEILLEYKSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 353 ~~~~~~g~il~~~~~~~l~~yd~~~~~~~~ 382 (410)
+.+..+|.|++...++.|+.||.+++....
T Consensus 260 ~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 260 PVIGNTDTIYFGSYDGHLYAINPDGTEKWN 289 (330)
T ss_dssp CEECTTSCEEEECTTCEEEEECTTSCEEEE
T ss_pred ceEcCCCeEEEecCCCCEEEECCCCcEEEE
Confidence 334445666666666677777764343333
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=38.50 E-value=2.3e+02 Score=25.75 Aligned_cols=146 Identities=12% Similarity=0.105 Sum_probs=72.5
Q ss_pred ccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccC
Q 015251 125 SCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYP 204 (410)
Q Consensus 125 s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 204 (410)
|.+++|-+.- .+.++|||..|++...+-.... ....+..+.|.|. +.|-++. . .
T Consensus 114 S~~n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~--~~~~V~sv~fspd-g~~lasg--s--~---------------- 167 (420)
T 4gga_A 114 SSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQ--PGEYISSVAWIKE-GNYLAVG--T--S---------------- 167 (420)
T ss_dssp CTTSEEEEEE---TTEEEEEETTTCCEEEEEECCS--TTCCEEEEEECTT-SSEEEEE--E--T----------------
T ss_pred CCCCEEEEEe---CCEEEEEECCCCCEEEEEEecC--CCCcEEEEEECCC-CCEEEEE--E--C----------------
Confidence 4566665443 4689999999998766432211 1134566777774 3443322 1 1
Q ss_pred CceEEEEEeCCCceee-cCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceE
Q 015251 205 RSDVQVYTVGSPAWRS-KGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYH 283 (410)
Q Consensus 205 ~~~~~Vyss~t~~Wr~-~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~ 283 (410)
...+.+++..+++-.. ...-. ....++..+|.+-..... ...+..+|..........+..... ....
T Consensus 168 Dg~v~iWd~~~~~~~~~~~~h~----~~v~~~s~~~~~l~sgs~-----d~~i~~~d~~~~~~~~~~~~~h~~---~~~~ 235 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMTSHS----ARVGSLSWNSYILSSGSR-----SGHIHHHDVRVAEHHVATLSGHSQ---EVCG 235 (420)
T ss_dssp TSCEEEEETTTTEEEEEECCCS----SCEEEEEEETTEEEEEET-----TSEEEEEETTSSSCEEEEEECCSS---CEEE
T ss_pred CCeEEEEEcCCCcEEEEEeCCC----CceEEEeeCCCEEEEEeC-----CCceeEeeecccceeeEEeccccc---ceee
Confidence 2578888888774221 11100 011123344444333322 256777777654433222221111 1111
Q ss_pred EE-EeCCeEEEEEeCCCCeEEEEEEee
Q 015251 284 LT-VLSGCLSVAVYGNYGKLEIWVMKD 309 (410)
Q Consensus 284 l~-~~~G~L~~~~~~~~~~l~IW~l~~ 309 (410)
+. .-+|...+... .+..+.||-+..
T Consensus 236 ~~~~~~g~~l~s~~-~D~~v~i~~~~~ 261 (420)
T 4gga_A 236 LRWAPDGRHLASGG-NDNLVNVWPSAP 261 (420)
T ss_dssp EEECTTSSEEEEEE-TTSCEEEEESSC
T ss_pred eeecCCCCeeeeee-ccccceEEeecc
Confidence 22 22455544443 367899998764
No 92
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=37.62 E-value=3.3e+02 Score=27.39 Aligned_cols=145 Identities=13% Similarity=0.126 Sum_probs=73.3
Q ss_pred ceEEEEEeCCCceeecCCCCc-ee-ecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcc
Q 015251 206 SDVQVYTVGSPAWRSKGKLAY-QF-VRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCN 281 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~-~~-~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~ 281 (410)
..+..|+..++.|+.....+. .. ...-.+++. +|.+ |+... ...|..||..++++..+..+.... ....
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~-----~~Gl~~~~~~~~~~~~~~~~~~l~-~~~i 541 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-WIGTF-----GGGVGIYTPDMQLVRKFNQYEGFC-SNTI 541 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-EEEES-----SSCEEEECTTCCEEEEECTTTTCS-CSCE
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-EEEEc-----CCCEEEEeCCCCeEEEccCCCCCC-CCee
Confidence 457788888888876542210 00 011112222 4555 55543 146899999999998875433211 1111
Q ss_pred eEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCc
Q 015251 282 YHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGE 360 (410)
Q Consensus 282 ~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 360 (410)
..+.+ -+|.|.+... ..+ |..++.. ...+.. + .. ..++ ....+.-+....+|.
T Consensus 542 ~~i~~d~~g~lWi~T~---~Gl-v~~~d~~--~~~~~~-~--~~--~~gl---------------~~~~i~~i~~d~~g~ 595 (781)
T 3v9f_A 542 NQIYRSSKGQMWLATG---EGL-VCFPSAR--NFDYQV-F--QR--KEGL---------------PNTHIRAISEDKNGN 595 (781)
T ss_dssp EEEEECTTSCEEEEET---TEE-EEESCTT--TCCCEE-E--CG--GGTC---------------SCCCCCEEEECSSSC
T ss_pred EEEEECCCCCEEEEEC---CCc-eEEECCC--CCcEEE-c--cc--cCCC---------------CCceEEEEEECCCCC
Confidence 23333 3566555432 222 0222211 122221 1 11 0110 011233455566788
Q ss_pred EEEEecCCEEEEEeCCCCcEEEEE
Q 015251 361 ILLEYKSRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 361 il~~~~~~~l~~yd~~~~~~~~v~ 384 (410)
|++... .+|..||+++++++.+.
T Consensus 596 lW~~t~-~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 596 IWASTN-TGISCYITSKKCFYTYD 618 (781)
T ss_dssp EEEECS-SCEEEEETTTTEEEEEC
T ss_pred EEEEcC-CceEEEECCCCceEEec
Confidence 888876 45999999999987765
No 93
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=35.90 E-value=63 Score=28.88 Aligned_cols=139 Identities=8% Similarity=0.046 Sum_probs=63.8
Q ss_pred ceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCce-eeEE-cCCCCCCCCCcc
Q 015251 206 SDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQ-FREV-PKPDCGGLNRCN 281 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~-~~~i-~lP~~~~~~~~~ 281 (410)
..+.+|+..++.|+.+..+..... .-.++.+ +|.+...+.. .+.|..+|+.+.+ +..+ .+.... ..
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~-----d~~v~vwd~~~~~~~~~~~~~~~~~----~~ 102 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDK-IVTCVDWAPKSNRIVTCSQ-----DRNAYVYEKRPDGTWKQTLVLLRLN----RA 102 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSS-CEEEEEECTTTCCEEEEET-----TSSEEEC------CCCCEEECCCCS----SC
T ss_pred CEEEEEEccCCceEEEEEEecCCc-eEEEEEEeCCCCEEEEEeC-----CCeEEEEEcCCCCceeeeeEecccC----Cc
Confidence 467788888888876653321100 0001111 2332222222 2578888988766 3322 222111 11
Q ss_pred eEEEEe--CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCC
Q 015251 282 YHLTVL--SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKG 359 (410)
Q Consensus 282 ~~l~~~--~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 359 (410)
..-+.+ +|.+.++... +..+.||-++.. ..|.....+.. ++ ...+.-+.+..+|
T Consensus 103 v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~---~~~~~~~~~~~--~h------------------~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSG-ARVISVCYFEQE---NDWWVSKHLKR--PL------------------RSTILSLDWHPNN 158 (377)
T ss_dssp EEEEECCTTSSCCEEEES-SSCEEECCC--------CCCCEEECS--SC------------------CSCEEEEEECTTS
T ss_pred eEEEEECCCCCEEEEEec-CCeEEEEEECCc---ccceeeeEeec--cc------------------CCCeEEEEEcCCC
Confidence 222222 4555554443 678999988752 33554444432 00 0134456666677
Q ss_pred cEEEE-ecCCEEEEEeCCCC
Q 015251 360 EILLE-YKSRVLVSYDPKRR 378 (410)
Q Consensus 360 ~il~~-~~~~~l~~yd~~~~ 378 (410)
.+++. ..++.+..||.+++
T Consensus 159 ~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 159 VLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp SEEEEEESSSCEEEEEECCS
T ss_pred CEEEEEeCCCEEEEEEEEec
Confidence 76654 45677888997643
No 94
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=35.68 E-value=2.2e+02 Score=24.69 Aligned_cols=34 Identities=3% Similarity=-0.126 Sum_probs=23.6
Q ss_pred eEEEEEccCCcEEEE-ecCCEEEEEeCCCCcEEEE
Q 015251 350 VRVVCILEKGEILLE-YKSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 350 ~~~~~~~~~g~il~~-~~~~~l~~yd~~~~~~~~v 383 (410)
+.-+.+..+|..++. ..++.+..||.++++....
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 445666667776654 4567899999998776543
No 95
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=35.26 E-value=69 Score=23.82 Aligned_cols=40 Identities=13% Similarity=0.275 Sum_probs=29.2
Q ss_pred eEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEE
Q 015251 140 AICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKI 183 (410)
Q Consensus 140 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~ 183 (410)
.+++.+|.|++|. |.... .+...+.+..|...+.|+++..
T Consensus 12 ~V~~~d~~~~~W~--p~~~~--~g~s~V~~~~d~~~~~yrIv~~ 51 (112)
T 1evh_A 12 AVMVYDDANKKWV--PAGGS--TGFSRVHIYHHTGNNTFRVVGR 51 (112)
T ss_dssp EEEEEETTTTEEE--EGGGC--CSCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCCceE--ECCCC--CCceEEEEEEECCCCEEEEEEE
Confidence 6889999999875 33211 1235578899988889999876
No 96
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=34.04 E-value=2.2e+02 Score=24.24 Aligned_cols=195 Identities=12% Similarity=0.013 Sum_probs=91.4
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
...++++||.+++...+..+..........++.+++..+ ++.... . ...+.+|+.. ++
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g--~l~v~~---~----------------~~~l~~~d~~-g~ 102 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN--QLFVAD---M----------------RLGLLVVQTD-GT 102 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS--EEEEEE---T----------------TTEEEEEETT-SC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC--cEEEEE---C----------------CCCEEEEeCC-CC
Confidence 457999999998876653311000012345677776522 222221 0 1356777777 66
Q ss_pred eeec-CCCCce-eecCCcceEE--CCeEEEEecCC----------CCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceE
Q 015251 218 WRSK-GKLAYQ-FVRRPSEALV--KGRLHWVTRPR----------RYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYH 283 (410)
Q Consensus 218 Wr~~-~~~p~~-~~~~~~~v~~--~G~lyw~~~~~----------~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~ 283 (410)
.+.+ ...... .......+.+ +|.+|+..... .......|..+|.. .++..+.-.. . ....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~-~~~~ 176 (314)
T 1pjx_A 103 FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF----Q-FPNG 176 (314)
T ss_dssp EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE----S-SEEE
T ss_pred EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC----C-Ccce
Confidence 5544 211110 0011223333 57776655431 00112578999987 5554331100 0 0112
Q ss_pred EEEe-----CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccC
Q 015251 284 LTVL-----SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEK 358 (410)
Q Consensus 284 l~~~-----~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (410)
+... +|+..++.......+.+|-++.. ........+.. ++... . ....-+++..+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~---g~~~~~~~~~~-~~~~~---~-------------~~p~~i~~d~~ 236 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP---AKIENKKVWGH-IPGTH---E-------------GGADGMDFDED 236 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEET---TEEEEEEEEEE-CCCCS---S-------------CEEEEEEEBTT
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCC---CccccceEEEE-CCCCC---C-------------CCCCceEECCC
Confidence 2222 34333333223456777766532 22322211111 11000 0 01223566778
Q ss_pred CcEEEEe-cCCEEEEEeCCCCcE
Q 015251 359 GEILLEY-KSRVLVSYDPKRRTF 380 (410)
Q Consensus 359 g~il~~~-~~~~l~~yd~~~~~~ 380 (410)
|.+++.. ..+.|..||+++++.
T Consensus 237 G~l~v~~~~~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 237 NNLLVANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp CCEEEEEETTTEEEEECTTCBSC
T ss_pred CCEEEEEcCCCEEEEEcCCCCcE
Confidence 8888764 567899999995543
No 97
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=32.95 E-value=2.5e+02 Score=24.57 Aligned_cols=47 Identities=15% Similarity=0.155 Sum_probs=31.4
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEE-EeCCeEEEEE
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLT-VLSGCLSVAV 295 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~-~~~G~L~~~~ 295 (410)
+|.+||.... ...|..+|..+.+...+.+|.. ...+. .-+|++.+..
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~~~------v~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHALPFM------GSALAKISDSKQLIAS 107 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEECSSC------EEEEEEEETTEEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEECCCc------ceEEEEeCCCeEEEEE
Confidence 3789999765 3689999999988877766521 12233 3467776654
No 98
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=32.75 E-value=10 Score=34.93 Aligned_cols=27 Identities=11% Similarity=-0.012 Sum_probs=18.2
Q ss_pred cceEECCeEEEEecCCCCCCCceEEEEEcCCce
Q 015251 233 SEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ 265 (410)
Q Consensus 233 ~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~ 265 (410)
.++..+|.+|.-+.. +.|.++|..+.+
T Consensus 4 sP~v~~~~v~~gs~d------g~v~a~d~~tG~ 30 (369)
T 2hz6_A 4 TVTLPETLLFVSTLD------GSLHAVSKRTGS 30 (369)
T ss_dssp ----CTTEEEEEETT------SEEEEEETTTCC
T ss_pred CCeeeCCEEEEEcCC------CEEEEEECCCCC
Confidence 455678888877765 689999987654
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=32.34 E-value=2.9e+02 Score=25.19 Aligned_cols=94 Identities=14% Similarity=0.211 Sum_probs=56.0
Q ss_pred ceEEEEEcCCcee-eEEcCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCccccc
Q 015251 254 RGIVSFDIADEQF-REVPKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQ 332 (410)
Q Consensus 254 ~~Il~fDl~~e~~-~~i~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~ 332 (410)
+.|..+|+.+.+. ..+.... .....+..+|...+... .+..+.||-+.+.. +.......
T Consensus 332 g~i~vwd~~~~~~~~~~~~h~------~~v~~~~~~~~~l~s~s-~dg~v~vwd~~~~~------~~~~~~~~------- 391 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTLQGHT------ALVGLLRLSDKFLVSAA-ADGSIRGWDANDYS------RKFSYHHT------- 391 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCS------SCEEEEEECSSEEEEEE-TTSEEEEEETTTCC------EEEEEECT-------
T ss_pred CcEEEEECCCCcEEEEEeCCC------CcEEEEEEcCCEEEEEe-CCCcEEEEECCCCc------eeeeecCC-------
Confidence 5688888876653 2333221 12333445566555444 36789999876521 12222110
Q ss_pred ccCCcchhhcccCCCceeEEEEEccCCcEEEEecCCEEEEEeCCCCcEEE
Q 015251 333 SLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYKSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~~~~~~~ 382 (410)
.....+++..+|.+++...++.+..||.++++...
T Consensus 392 ---------------~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 392 ---------------NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp ---------------TCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEE
T ss_pred ---------------CCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe
Confidence 12334566667888887768899999999988654
No 100
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=32.21 E-value=1e+02 Score=24.85 Aligned_cols=38 Identities=16% Similarity=0.446 Sum_probs=28.2
Q ss_pred eEEEEccccc-ceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEE
Q 015251 140 AICIYNPFTR-DYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKI 183 (410)
Q Consensus 140 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~ 183 (410)
.+++.||.|+ .|+..-.. ...+.+.+|...+.|+|+.+
T Consensus 17 ~Vm~~D~~tk~~WvP~g~~------~~~V~i~~d~~rnsyRIvg~ 55 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVPTSKH------AVTVSYFYDSTRNVYRIISL 55 (168)
T ss_dssp EEEEECTTSSCCSEESCSS------CEEEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCCceeecCCC------CeEEEEEEcCCCCEEEEEEc
Confidence 7899999997 88643222 23566778988888999885
No 101
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=31.77 E-value=2.5e+02 Score=24.27 Aligned_cols=109 Identities=14% Similarity=0.116 Sum_probs=61.7
Q ss_pred CeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCcee
Q 015251 239 GRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWA 317 (410)
Q Consensus 239 G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~ 317 (410)
|.||--+.. .....|..+|+.+.+- ..+++|... ...-++..+++|++.... ... +++.+- ..-.
T Consensus 32 g~Lyvstg~---~~~s~v~~iD~~tg~v~~~i~l~~~~----fgeGi~~~g~~lyv~t~~-~~~--v~viD~----~t~~ 97 (266)
T 2iwa_A 32 DTLFESTGL---YGRSSVRQVALQTGKVENIHKMDDSY----FGEGLTLLNEKLYQVVWL-KNI--GFIYDR----RTLS 97 (266)
T ss_dssp TEEEEEECS---TTTCEEEEEETTTCCEEEEEECCTTC----CEEEEEEETTEEEEEETT-CSE--EEEEET----TTTE
T ss_pred CeEEEECCC---CCCCEEEEEECCCCCEEEEEecCCCc----ceEEEEEeCCEEEEEEec-CCE--EEEEEC----CCCc
Confidence 677776542 1247899999987664 567776521 122345556777777643 333 455542 2234
Q ss_pred eEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCC-cEEEEecCCEEEEEeCCCCcE-EEEE
Q 015251 318 KELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKG-EILLEYKSRVLVSYDPKRRTF-NEFV 384 (410)
Q Consensus 318 ~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~il~~~~~~~l~~yd~~~~~~-~~v~ 384 (410)
...+|...+|.+ | ++..|| .+++..++..+...|++|.+. +.|.
T Consensus 98 v~~~i~~g~~~g-----------~------------glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 98 NIKNFTHQMKDG-----------W------------GLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEEEEECCSSSC-----------C------------EEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEEECCCCCe-----------E------------EEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 445554311211 1 233344 455555667899999998664 3444
No 102
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=31.72 E-value=1.9e+02 Score=29.11 Aligned_cols=61 Identities=10% Similarity=0.060 Sum_probs=33.0
Q ss_pred ceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcC
Q 015251 206 SDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPK 271 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~l 271 (410)
..+++|+.....-+.+................++.+||.... .+.|..+|..+.+. ..|..
T Consensus 562 ~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~-----~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 562 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-----NEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp TEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST-----TTCEEEEETTTEEEEECCCT
T ss_pred CeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC-----CCeEEEEEccCCCceEEeec
Confidence 466777765433333321111111111223456799999865 47899999876543 44544
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=31.53 E-value=3.1e+02 Score=25.15 Aligned_cols=193 Identities=9% Similarity=-0.050 Sum_probs=92.8
Q ss_pred CceEEEEcccccceeeCCC-CCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCC
Q 015251 138 NDAICIYNPFTRDYIELPK-SMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSP 216 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~-~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~ 216 (410)
...+++++..+++....+. ..... ...+..+.+.|..+.-+.+.... . ...+.+|+..++
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~--~----------------d~~i~vwd~~~~ 230 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGH-VSMLTDVHLIKDSDGHQFIITSD--R----------------DEHIKISHYPQC 230 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEEC-SSCEEEEEEEECTTSCEEEEEEE--T----------------TSCEEEEEESCT
T ss_pred CCcEEEEecCCcccccccceeeecc-cCceEEEEEcCCCCCCcEEEEEc--C----------------CCcEEEEECCCC
Confidence 4567888877666543111 11111 13445667777511123333221 1 157888888877
Q ss_pred ceeec-C-CCCceeecCCcceEE-CCeEEEEecCCCCCCCceEEEEEcCCcee-eEEcCCC-------------C-----
Q 015251 217 AWRSK-G-KLAYQFVRRPSEALV-KGRLHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPD-------------C----- 274 (410)
Q Consensus 217 ~Wr~~-~-~~p~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~-------------~----- 274 (410)
.-... . .-...+ .++.+ +|.+...+.. .+.|..+|+.+.+. ..++++. .
T Consensus 231 ~~~~~~~~~h~~~v----~~~~~sd~~~l~s~~~-----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 231 FIVDKWLFGHKHFV----SSICCGKDYLLLSAGG-----DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp TCEEEECCCCSSCE----EEEEECSTTEEEEEES-----SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred ceeeeeecCCCCce----EEEEECCCCEEEEEeC-----CCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 53321 1 100000 11122 5554444433 26899999987653 3444221 0
Q ss_pred C--CCCCcceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeE
Q 015251 275 G--GLNRCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVR 351 (410)
Q Consensus 275 ~--~~~~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 351 (410)
. ........+... +|...++.......+.||.+.+.. ...+.....+... ..+.
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~----------------------~~v~ 358 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFP----------------------YNVI 358 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECS----------------------SCEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccC----------------------CceE
Confidence 0 000011122222 466666655457899999993211 2345555555431 0233
Q ss_pred EEEEccCCcEEEEecCC----------EEEEEeCCCCcEEE
Q 015251 352 VVCILEKGEILLEYKSR----------VLVSYDPKRRTFNE 382 (410)
Q Consensus 352 ~~~~~~~g~il~~~~~~----------~l~~yd~~~~~~~~ 382 (410)
-+++.. +.+++..... .++.++.++++++.
T Consensus 359 ~~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 359 SLSAHN-DEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp EEEEET-TEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEE
T ss_pred EEEecC-CcEEEEEecccCCCCCCcceEEEEEEcCCCeEEE
Confidence 344544 3444443221 78888898888863
No 104
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=31.51 E-value=3e+02 Score=25.01 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=58.1
Q ss_pred CceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCc
Q 015251 127 NGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRS 206 (410)
Q Consensus 127 ~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (410)
.+.|++.. ...+..+++.+++...+-... ....++.+|+..+ +|+... .. ..
T Consensus 87 ~~~l~~~~---~~~I~~i~~~~~~~~~~~~~~-----~~~~gl~~d~~~~--~ly~~D--~~----------------~~ 138 (386)
T 3v65_B 87 EPVLLFAN---RIDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRE--LVFWSD--VT----------------LD 138 (386)
T ss_dssp CCEEEEEC---BSCEEEECTTSCCCEEEECSC-----SCEEEEEEETTTT--EEEEEE--TT----------------TT
T ss_pred cceeEeec---CccceeeccCCCcEEEEecCC-----CccEEEEEecCCC--eEEEEe--CC----------------CC
Confidence 45555553 346777777766554432211 2457888887654 333321 11 14
Q ss_pred eEEEEEeCCCceeecCCCCceeecCCcceE---ECCeEEEEecCCCCCCCceEEEEEcCCceeeEE
Q 015251 207 DVQVYTVGSPAWRSKGKLAYQFVRRPSEAL---VKGRLHWVTRPRRYSPVRGIVSFDIADEQFREV 269 (410)
Q Consensus 207 ~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i 269 (410)
.+..++..++..+.+..... ....++. .+|.|||.... ...|..+|++...-..+
T Consensus 139 ~I~r~~~~g~~~~~~~~~~~---~~p~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 139 RILRANLNGSNVEEVVSTGL---ESPGGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVL 196 (386)
T ss_dssp EEEEEETTSCCEEEEECSSC---SCCCCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCEEE
T ss_pred cEEEEecCCCCcEEEEeCCC---CCccEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEe
Confidence 56667766655444321100 0112333 36899999865 46899999976554333
No 105
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=30.76 E-value=3.1e+02 Score=25.00 Aligned_cols=34 Identities=18% Similarity=0.077 Sum_probs=25.9
Q ss_pred eEEEEEccCCcEEEEecCCEEEEEeCCCCcEEEE
Q 015251 350 VRVVCILEKGEILLEYKSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 350 ~~~~~~~~~g~il~~~~~~~l~~yd~~~~~~~~v 383 (410)
+..-...+.|-|++.+..+.++.||++|++.-..
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 3344446677788888889999999999997543
No 106
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=30.70 E-value=2.7e+02 Score=24.23 Aligned_cols=193 Identities=17% Similarity=0.154 Sum_probs=90.4
Q ss_pred CceEEEEcccccce---eeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeC
Q 015251 138 NDAICIYNPFTRDY---IELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVG 214 (410)
Q Consensus 138 ~~~~~V~NP~T~~~---~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~ 214 (410)
.+.+.|||..++++ ..++.. ......+.+.+. +.+-+.. . . ...+.+|+..
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~-~~~l~~~--~--~----------------dg~i~vwd~~ 82 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEH-----NGQVTGVDWAPD-SNRIVTC--G--T----------------DRNAYVWTLK 82 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECC-----SSCEEEEEEETT-TTEEEEE--E--T----------------TSCEEEEEEE
T ss_pred CCEEEEEeCCCCcEEeeeeecCC-----CCcccEEEEeCC-CCEEEEE--c--C----------------CCeEEEEECC
Confidence 46788888888753 333321 134556777774 3332222 1 1 1578899998
Q ss_pred CCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCce-e---eEEcCCCCCCCCCcceEEEEe-
Q 015251 215 SPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQ-F---REVPKPDCGGLNRCNYHLTVL- 287 (410)
Q Consensus 215 t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~-~---~~i~lP~~~~~~~~~~~l~~~- 287 (410)
++.+.......... ..-..+.+ +|.+...+.. .+.|..+|+.+.. + ..+..+.. .....+...
T Consensus 83 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-----d~~v~i~d~~~~~~~~~~~~~~~~~~----~~i~~~~~~~ 152 (372)
T 1k8k_C 83 GRTWKPTLVILRIN-RAARCVRWAPNEKKFAVGSG-----SRVISICYFEQENDWWVCKHIKKPIR----STVLSLDWHP 152 (372)
T ss_dssp TTEEEEEEECCCCS-SCEEEEEECTTSSEEEEEET-----TSSEEEEEEETTTTEEEEEEECTTCC----SCEEEEEECT
T ss_pred CCeeeeeEEeecCC-CceeEEEECCCCCEEEEEeC-----CCEEEEEEecCCCcceeeeeeecccC----CCeeEEEEcC
Confidence 88765432110000 00001111 3433333332 2567777776654 2 22222211 111223222
Q ss_pred CCeEEEEEeCCCCeEEEEEEeeCC-----CCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEE
Q 015251 288 SGCLSVAVYGNYGKLEIWVMKDYN-----VKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEIL 362 (410)
Q Consensus 288 ~G~L~~~~~~~~~~l~IW~l~~~~-----~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il 362 (410)
+|.+.++.. .+..+.+|-+.... ....|....... .... ........+.-+.+..+|..+
T Consensus 153 ~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~--~~~~~~~~v~~~~~~~~~~~l 217 (372)
T 1k8k_C 153 NSVLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFG------------ELMF--ESSSSCGWVHGVCFSANGSRV 217 (372)
T ss_dssp TSSEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTT------------CEEE--ECCCCSSCEEEEEECSSSSEE
T ss_pred CCCEEEEEc-CCCCEEEEEcccccccccccccccccccchh------------hheE--ecCCCCCeEEEEEECCCCCEE
Confidence 455555444 36789999875321 012232210000 0000 000011234556666677665
Q ss_pred EE-ecCCEEEEEeCCCCcEE
Q 015251 363 LE-YKSRVLVSYDPKRRTFN 381 (410)
Q Consensus 363 ~~-~~~~~l~~yd~~~~~~~ 381 (410)
+. ..++.+..||.++++..
T Consensus 218 ~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEETTTEEEEEEGGGTTEE
T ss_pred EEEeCCCEEEEEECCCCcee
Confidence 54 56678899999877643
No 107
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=30.29 E-value=25 Score=21.47 Aligned_cols=20 Identities=25% Similarity=0.235 Sum_probs=15.0
Q ss_pred CCCCCcHHHHHHHHccCCcc
Q 015251 24 GMETLPREIVLHILLRLPIT 43 (410)
Q Consensus 24 ~~~~LP~Dll~eIL~rLP~~ 43 (410)
-...||.|+..|||+--...
T Consensus 20 VF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 20 VFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp GTTTSCHHHHHHHTTCCCSC
T ss_pred HHHHCcHHHHHHHHhcchHH
Confidence 35679999999999865533
No 108
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=30.08 E-value=4.4e+02 Score=26.53 Aligned_cols=203 Identities=13% Similarity=0.175 Sum_probs=98.4
Q ss_pred ccCceEEEeeccCCceEEEEcccccceeeCCCCCCCC---CCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccc
Q 015251 125 SCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYP---DQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRV 201 (410)
Q Consensus 125 s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~---~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 201 (410)
..+|-|-+... ..++++||.++++..+...+... ....+..+..|.... +.+...
T Consensus 271 d~~g~lWigt~---~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~----lWigt~--------------- 328 (795)
T 4a2l_A 271 DSQNRLWIGTF---NDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG----MWLGTY--------------- 328 (795)
T ss_dssp CTTSCEEEEES---SCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC----EEEEES---------------
T ss_pred cCCCCEEEEeC---ChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC----EEEEEC---------------
Confidence 34566655442 36788888888877664322111 112344455554321 222210
Q ss_pred ccCCceEEEEEeCCCceeecCCCC--ceee-cCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCC-
Q 015251 202 IYPRSDVQVYTVGSPAWRSKGKLA--YQFV-RRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCG- 275 (410)
Q Consensus 202 ~~~~~~~~Vyss~t~~Wr~~~~~p--~~~~-~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~- 275 (410)
...+..|+..++.++.....+ ..+. ..-.+++. +|.+ |+... ...|..||..+.+|..+..+...
T Consensus 329 ---~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~-----~~Gl~~~~~~~~~~~~~~~~~~~~ 399 (795)
T 4a2l_A 329 ---FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTN-----DGGLNLYNPITQRFTSYTLQEDES 399 (795)
T ss_dssp ---SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEES-----SSCEEEECTTTCCEEEECCC----
T ss_pred ---CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEEC-----CCCeEEEcCCCCcEEEEecCCCCc
Confidence 134556666666655443211 1110 01112333 3554 55544 25799999999999887644210
Q ss_pred --CC-CCcceEEEE-eCCe-EEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCcee
Q 015251 276 --GL-NRCNYHLTV-LSGC-LSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVV 350 (410)
Q Consensus 276 --~~-~~~~~~l~~-~~G~-L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 350 (410)
.. ......+.+ -+|. |.+-.. ...+.+ ++.. ...+.. +...-+. .....+
T Consensus 400 ~~~l~~~~v~~i~~d~~g~~lWigt~--~~Gl~~--~d~~--~~~~~~---~~~~~~~----------------l~~~~v 454 (795)
T 4a2l_A 400 ARGIGSNNIKAVYVDEKKSLVYIGTH--AGGLSI--LHRN--SGQVEN---FNQRNSQ----------------LVNENV 454 (795)
T ss_dssp --CCSCSCEEEEEEETTTTEEEEEET--TTEEEE--EETT--TCCEEE---ECTTTSC----------------CSCSCE
T ss_pred ccCCCCccEEEEEEcCCCCEEEEEeC--cCceeE--EeCC--CCcEEE---eecCCCC----------------cCCCee
Confidence 01 111223433 3566 554432 234433 3321 122221 1110000 001234
Q ss_pred EEEEEccCCcEEEEecCCEEEEEeCCCCcEEEEE
Q 015251 351 RVVCILEKGEILLEYKSRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 351 ~~~~~~~~g~il~~~~~~~l~~yd~~~~~~~~v~ 384 (410)
.-+....+|.+++... .+|+.||+++++++.+.
T Consensus 455 ~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 455 YAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIE 487 (795)
T ss_dssp EEEEECSSSCEEEEES-SCEEEEETTTTEEEECC
T ss_pred EEEEECCCCCEEEEec-CceeEEeCCCCeEEEcc
Confidence 4555666788888877 56999999999887654
No 109
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=29.50 E-value=2.7e+02 Score=23.97 Aligned_cols=144 Identities=8% Similarity=-0.045 Sum_probs=68.5
Q ss_pred ceEEEEEeCCCceeecCCCCceeecCCcceEECCe-EEEEecCCCCCCCceEEEEEcCCcee-eEEcCCCCCCCC---Cc
Q 015251 206 SDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGR-LHWVTRPRRYSPVRGIVSFDIADEQF-REVPKPDCGGLN---RC 280 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~Il~fDl~~e~~-~~i~lP~~~~~~---~~ 280 (410)
..+.+++..+++-...-..... ...-.+.-+|. +|..... .+.|..+|+.+.+. ..++++...... ..
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGNTV-----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEETT-----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred ccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEecC-----CCEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 4677777776643211100000 01112334565 5555443 36899999987665 556665321100 01
Q ss_pred -ceEEEEe-CCe-EEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc
Q 015251 281 -NYHLTVL-SGC-LSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE 357 (410)
Q Consensus 281 -~~~l~~~-~G~-L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (410)
...+... +|+ |++........+.+|-++. ......+... .. ...-+.+..
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~------~~~~~~~~~~-~~--------------------~~~~~~~s~ 194 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGN------IKLKTAIQNT-GK--------------------MSTGLALDS 194 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTT------TEEEEEECCC-CT--------------------TCCCCEEET
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCC------CceEEEecCC-CC--------------------ccceEEECC
Confidence 1123332 555 4444433345566664432 2333333310 00 011234555
Q ss_pred CCcEEE-EecCCEEEEEeCCCCcEEEE
Q 015251 358 KGEILL-EYKSRVLVSYDPKRRTFNEF 383 (410)
Q Consensus 358 ~g~il~-~~~~~~l~~yd~~~~~~~~v 383 (410)
+|+.++ ...++.+..||+.+++....
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 666444 44557788999988876543
No 110
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=29.49 E-value=2.6e+02 Score=23.72 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=21.6
Q ss_pred CCeEEEE-------ecCCCCCCCceEEEEEcCCceeeEEcCC
Q 015251 238 KGRLHWV-------TRPRRYSPVRGIVSFDIADEQFREVPKP 272 (410)
Q Consensus 238 ~G~lyw~-------~~~~~~~~~~~Il~fDl~~e~~~~i~lP 272 (410)
+|.+|+. ... .+.|..||+.+.++..+..|
T Consensus 28 ~g~l~~~~~~~~~~~~~-----~~~i~~~d~~~g~~~~~~~~ 64 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKP-----AGEILRIDLKTGKKTVICKP 64 (314)
T ss_dssp TSCEEEEETTCEETTEE-----CCEEEEECTTTCCEEEEECC
T ss_pred CCCEEEEEeccccCCCC-----CCEEEEEeCCCCcEEEEEec
Confidence 6888887 222 26799999988888776553
No 111
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=29.49 E-value=2.7e+02 Score=23.85 Aligned_cols=30 Identities=20% Similarity=0.342 Sum_probs=24.1
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCC
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKP 272 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP 272 (410)
+|.+||.... ...|..||..+.+...+..|
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~ 53 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMD 53 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEECS
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeCC
Confidence 4899999865 47899999998877766665
No 112
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=29.47 E-value=2.9e+02 Score=24.17 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=60.0
Q ss_pred EEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccc
Q 015251 122 AVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRV 201 (410)
Q Consensus 122 ~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 201 (410)
.++..+|.|...+......++++++-......+-.. ......|+++|+..+ ++.... ..
T Consensus 126 avdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~----~~~~P~gla~d~~~~--~lY~~D--~~------------- 184 (316)
T 1ijq_A 126 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE----NIQWPNGITLDLLSG--RLYWVD--SK------------- 184 (316)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS----SCSCEEEEEEETTTT--EEEEEE--TT-------------
T ss_pred EeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC----CCCCceEEEEeccCC--EEEEEE--CC-------------
Confidence 456678887776532235788888754443333111 113456888887643 333321 01
Q ss_pred ccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCce
Q 015251 202 IYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ 265 (410)
Q Consensus 202 ~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~ 265 (410)
...+++++.....=+.+............-...+|.+||.... .+.|..+|..+.+
T Consensus 185 ---~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~-----~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 185 ---LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-----NEAIFSANRLTGS 240 (316)
T ss_dssp ---TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT-----TTEEEEEETTTCC
T ss_pred ---CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC-----CCeEEEEeCCCCc
Confidence 2467777765432222211000000000112357899998865 4789999985543
No 113
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.98 E-value=3.4e+02 Score=24.86 Aligned_cols=218 Identities=10% Similarity=0.017 Sum_probs=101.9
Q ss_pred EEEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccc
Q 015251 121 DAVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRR 200 (410)
Q Consensus 121 ~~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 200 (410)
.+.-..+|-|.+.+. ....+.++|+.+++...+...... . . +++++..+ .++.. . .. +
T Consensus 135 ~la~d~~g~lyv~d~-~~~~I~~id~~~g~~~~~~~~~~~----~-~-ia~~~~g~--~l~~~-d-~~----~------- 192 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQR-DDPRVRLISVDDNKVTTVHPGFKG----G-K-PAVTKDKQ--RVYSI-G-WE----G------- 192 (409)
T ss_dssp EEEECSTTEEEEEET-TTTEEEEEETTTTEEEEEEETCCB----C-B-CEECTTSS--EEEEE-B-SS----T-------
T ss_pred EEEEeCCCCEEEEec-CCCcEEEEECCCCEEEEeeccCCC----C-c-eeEecCCC--cEEEE-e-cC----C-------
Confidence 344446777766653 356899999998887766433211 1 1 45565432 22221 1 00 0
Q ss_pred cccCCceEEEEEeCCCc-eeecCCCCc-eeecCCcceEE---CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcC-CCC
Q 015251 201 VIYPRSDVQVYTVGSPA-WRSKGKLAY-QFVRRPSEALV---KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPK-PDC 274 (410)
Q Consensus 201 ~~~~~~~~~Vyss~t~~-Wr~~~~~p~-~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~l-P~~ 274 (410)
...+.+++..++. .+.+..... .. ....++.+ +|.||+ +.. .+.|..||+.+.....+.. +..
T Consensus 193 ----~~~I~~~d~~~~~~~~~~g~~~~~~~-~~p~~iav~p~~g~lyv-~d~-----~~~I~~~d~~~~~~~~~~~~~~~ 261 (409)
T 3hrp_A 193 ----THTVYVYMKASGWAPTRIGQLGSTFS-GKIGAVALDETEEWLYF-VDS-----NKNFGRFNVKTQEVTLIKQLELS 261 (409)
T ss_dssp ----TCEEEEEEGGGTTCEEEEEECCTTSC-SCCCBCEECTTSSEEEE-ECT-----TCEEEEEETTTCCEEEEEECCCC
T ss_pred ----CceEEEEEcCCCceeEEeeeccchhc-CCcEEEEEeCCCCeEEE-EEC-----CCcEEEEECCCCCEEEEeccccc
Confidence 0256666665432 233311111 11 11122222 689998 433 3689999998876655511 111
Q ss_pred CCCCCcce-EEEEe--CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeE
Q 015251 275 GGLNRCNY-HLTVL--SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVR 351 (410)
Q Consensus 275 ~~~~~~~~-~l~~~--~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 351 (410)
........ .++.. +|.|++.... ... |++++..+ . .. ..+...-..+... .+.. ......-.
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~-~~~--I~~~~~~g-~---~~-~~~g~~~~~g~~d---g~~~----~~~~~~P~ 326 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQN-LSS--VYKITPDG-E---CE-WFCGSATQKTVQD---GLRE----EALFAQPN 326 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETT-TTE--EEEECTTC-C---EE-EEEECTTCCSCBC---EEGG----GCBCSSEE
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCC-CCE--EEEEecCC-C---EE-EEEeCCCCCCcCC---Cccc----ccEeCCCe
Confidence 01111101 44444 4777766533 333 55554322 1 11 1111100000000 0000 00001122
Q ss_pred EEEEccCCcEEEEe--cCCEEEEEeCCCCcEEEEEEe
Q 015251 352 VVCILEKGEILLEY--KSRVLVSYDPKRRTFNEFVFK 386 (410)
Q Consensus 352 ~~~~~~~g~il~~~--~~~~l~~yd~~~~~~~~v~~~ 386 (410)
-+++..+|.+++.. ....+..+|+.++++..+...
T Consensus 327 gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 327 GMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp EEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence 35667788877764 457899999888887766543
No 114
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=28.55 E-value=4.3e+02 Score=25.89 Aligned_cols=211 Identities=10% Similarity=-0.051 Sum_probs=0.0
Q ss_pred ccCceEEEeeccCCceEEEEcccc-----cceeeCCCCCCCCCCce-------------EEEEEEeCCCCCeEEEEEEEE
Q 015251 125 SCNGLLCLSDSLFNDAICIYNPFT-----RDYIELPKSMQYPDQEV-------------VFGFGFHPVSKEYKVIKIVYY 186 (410)
Q Consensus 125 s~~Gll~l~~~~~~~~~~V~NP~T-----~~~~~LP~~~~~~~~~~-------------~~~l~~d~~~~~ykvv~~~~~ 186 (410)
|-+|-.+... ....++|++..+ ++...+-..... .. ..++.+.|.....-.......
T Consensus 129 SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~---~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~ 203 (706)
T 2z3z_A 129 SPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTE---TLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQS 203 (706)
T ss_dssp CTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBT---TEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECT
T ss_pred CCCCCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCC---CeEcccchhhhhcCCCceEEECCCCCEEEEEEECCC
Q ss_pred -----------------------------ecCCCCCccccccccccCCceEEEEEeCCCceeecCCC-CceeecCCcceE
Q 015251 187 -----------------------------RKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAWRSKGKL-AYQFVRRPSEAL 236 (410)
Q Consensus 187 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~-p~~~~~~~~~v~ 236 (410)
.. ..+.+++..++.-+.+... ............
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~-----------------~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 266 (706)
T 2z3z_A 204 MVKPTPIVDYHPLEAESKPLYYPMAGTPSHH-----------------VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWS 266 (706)
T ss_dssp TSCCEEEEECCSSSCEEEEECCCBTTSCCCE-----------------EEEEEEETTTTEEEECCCCSCTTCEEEEEEEC
T ss_pred CCceEEeeccCCCCCceEEeeCCCCCCCCCe-----------------eEEEEEECCCCceEeeccCCCCceeEeeEEEE
Q ss_pred ECCeEEEEecCCCCCCCceEEEEEcCCc-eeeEEcCCCCCCCCCcceEEEEe---CCeEEEEEeCCCCeEEEEEEeeCCC
Q 015251 237 VKGRLHWVTRPRRYSPVRGIVSFDIADE-QFREVPKPDCGGLNRCNYHLTVL---SGCLSVAVYGNYGKLEIWVMKDYNV 312 (410)
Q Consensus 237 ~~G~lyw~~~~~~~~~~~~Il~fDl~~e-~~~~i~lP~~~~~~~~~~~l~~~---~G~L~~~~~~~~~~l~IW~l~~~~~ 312 (410)
-+|..-.............|..+|+.+. ....+..............+.-. +|++.++... .....||.++..+.
T Consensus 267 pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~ 345 (706)
T 2z3z_A 267 PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGR 345 (706)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECCCC
Q ss_pred CCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEecCC------EEEEEeCCCCcEEEE
Q 015251 313 KESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYKSR------VLVSYDPKRRTFNEF 383 (410)
Q Consensus 313 ~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~------~l~~yd~~~~~~~~v 383 (410)
.........-.. ..++++..+|+.++..... .|+.+|.++++.+.+
T Consensus 346 ~~~~l~~~~~~v-------------------------~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 346 LIRQVTKGEWEV-------------------------TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp EEEECCCSSSCE-------------------------EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEES
T ss_pred EEEecCCCCeEE-------------------------EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceec
No 115
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=28.44 E-value=2.5e+02 Score=23.18 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=31.9
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcceEEEEe-CCeEEEEEeCCCCeEEEE
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNYHLTVL-SGCLSVAVYGNYGKLEIW 305 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~IW 305 (410)
+|.+|+.... +.|..||..+.....+..+.. .....+..- +|.|++.... ...+.+|
T Consensus 77 ~g~l~v~~~~------~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~-~~~i~~~ 134 (270)
T 1rwi_B 77 AGTVYVTDFN------NRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQGAVYVADRG-NNRVVKL 134 (270)
T ss_dssp TCCEEEEETT------TEEEEECTTCSCCEECCCCSC----SSEEEEEECTTCCEEEEEGG-GTEEEEE
T ss_pred CCCEEEEcCC------CEEEEEeCCCceEeeeecCCc----CCCcceEECCCCCEEEEECC-CCEEEEE
Confidence 5787766543 689999998876655543221 112234333 6776665432 3445554
No 116
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=28.34 E-value=1e+02 Score=22.99 Aligned_cols=41 Identities=10% Similarity=0.277 Sum_probs=29.6
Q ss_pred eEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEE
Q 015251 140 AICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKI 183 (410)
Q Consensus 140 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~ 183 (410)
.+++.+|.|++|. |..... .+...+.+..|...+.|.++..
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~-~gvs~V~~~~d~~~~~yrI~~~ 52 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGP-QAFSRVQIYHNPTANSFRVVGR 52 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSC-CCCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCCcee--ECCCCC-CCccEEEEEEeCCCCEEEEEEE
Confidence 6788999999975 443210 1244678889988889999886
No 117
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=28.14 E-value=2.9e+02 Score=23.78 Aligned_cols=31 Identities=3% Similarity=-0.175 Sum_probs=20.7
Q ss_pred eeEEEEEccCCcEEE--EecCCEEEEEeCCCCc
Q 015251 349 VVRVVCILEKGEILL--EYKSRVLVSYDPKRRT 379 (410)
Q Consensus 349 ~~~~~~~~~~g~il~--~~~~~~l~~yd~~~~~ 379 (410)
.+.-+++..+|..++ ...++.+..||+.+.+
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 355567777887665 3557889999987643
No 118
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=27.81 E-value=2.6e+02 Score=23.11 Aligned_cols=188 Identities=12% Similarity=0.103 Sum_probs=94.1
Q ss_pred ccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccC
Q 015251 125 SCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYP 204 (410)
Q Consensus 125 s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 204 (410)
..+|-|.+... ...++++|+.++....++.... ....++.+++.. . +... .. .
T Consensus 75 ~~~g~l~v~~~--~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g-~--l~v~-~~-~---------------- 127 (270)
T 1rwi_B 75 DGAGTVYVTDF--NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQG-A--VYVA-DR-G---------------- 127 (270)
T ss_dssp CTTCCEEEEET--TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTC-C--EEEE-EG-G----------------
T ss_pred CCCCCEEEEcC--CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCC-C--EEEE-EC-C----------------
Confidence 44666666553 5689999999887766654221 234677888743 2 3322 11 1
Q ss_pred CceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCCcce
Q 015251 205 RSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNRCNY 282 (410)
Q Consensus 205 ~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~~~~ 282 (410)
...+.+|+.++.......... . ....++.+ +|.+|+.... ...|..||..+.......... . ....
T Consensus 128 ~~~i~~~~~~~~~~~~~~~~~--~-~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~---~-~~p~ 195 (270)
T 1rwi_B 128 NNRVVKLAAGSKTQTVLPFTG--L-NDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPFTD---I-TAPW 195 (270)
T ss_dssp GTEEEEECTTCCSCEECCCCS--C-CSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCCSS---C-CSEE
T ss_pred CCEEEEEECCCceeEeecccc--C-CCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeecccC---C-CCce
Confidence 135666655544333221100 0 11223333 5887776654 368999999876654332211 1 1112
Q ss_pred EEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcE
Q 015251 283 HLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEI 361 (410)
Q Consensus 283 ~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 361 (410)
.+..- +|.|++.... ...+.+|-.+. ..... +.. .+ .....-+++..+|.+
T Consensus 196 ~i~~d~~g~l~v~~~~-~~~v~~~~~~~---~~~~~----~~~---~~-----------------~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHN-TNQVVKLLAGS---TTSTV----LPF---TG-----------------LNTPLAVAVDSDRTV 247 (270)
T ss_dssp EEEECTTCCEEEEETT-TSCEEEECTTC---SCCEE----CCC---CS-----------------CSCEEEEEECTTCCE
T ss_pred EEEECCCCCEEEEECC-CCcEEEEcCCC---Cccee----ecc---CC-----------------CCCceeEEECCCCCE
Confidence 33332 4566555432 33444443321 11111 110 00 012334566677887
Q ss_pred EEEe-cCCEEEEEeCCCCc
Q 015251 362 LLEY-KSRVLVSYDPKRRT 379 (410)
Q Consensus 362 l~~~-~~~~l~~yd~~~~~ 379 (410)
++.. .++.+..|++..++
T Consensus 248 ~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 248 YVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEGGGTEEEEECCCGGG
T ss_pred EEEECCCCEEEEEcCCCcc
Confidence 7654 45788899887665
No 119
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=27.31 E-value=3e+02 Score=23.76 Aligned_cols=158 Identities=11% Similarity=-0.029 Sum_probs=84.8
Q ss_pred cCceEEEeec-cCCceEEEEcccccceee-CCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccccc
Q 015251 126 CNGLLCLSDS-LFNDAICIYNPFTRDYIE-LPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIY 203 (410)
Q Consensus 126 ~~Gll~l~~~-~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 203 (410)
-+|.|....+ ...+.+.+.++.|++... +|.+.. ....|+..+. + ++..... .
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~----~fgeGi~~~g---~-~lyv~t~--~--------------- 84 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS----YFGEGLTLLN---E-KLYQVVW--L--------------- 84 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT----CCEEEEEEET---T-EEEEEET--T---------------
T ss_pred CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC----cceEEEEEeC---C-EEEEEEe--c---------------
Confidence 3477766653 235789999999998754 332221 2334566653 2 4444321 1
Q ss_pred CCceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCce-eeEEcCCCCCCCCCcce
Q 015251 204 PRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ-FREVPKPDCGGLNRCNY 282 (410)
Q Consensus 204 ~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~-~~~i~lP~~~~~~~~~~ 282 (410)
...+.||+..+.+ .+..++.. .....++..+|...|++.. .+.|..+|+++.+ -..|++......-....
T Consensus 85 -~~~v~viD~~t~~--v~~~i~~g-~~~g~glt~Dg~~l~vs~g-----s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 85 -KNIGFIYDRRTLS--NIKNFTHQ-MKDGWGLATDGKILYGSDG-----TSILYEIDPHTFKLIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp -CSEEEEEETTTTE--EEEEEECC-SSSCCEEEECSSSEEEECS-----SSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred -CCEEEEEECCCCc--EEEEEECC-CCCeEEEEECCCEEEEECC-----CCeEEEEECCCCcEEEEEEECCCCcccccce
Confidence 2578888888762 22222222 1223456667665555543 4799999998844 45666532100000011
Q ss_pred EEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEecc
Q 015251 283 HLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGA 324 (410)
Q Consensus 283 ~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~ 324 (410)
.|...+|+|++-... . =+|.+.+- ..+....+|++
T Consensus 156 ele~~dg~lyvn~~~-~--~~V~vID~----~tg~V~~~I~~ 190 (266)
T 2iwa_A 156 ELEYINGEVWANIWQ-T--DCIARISA----KDGTLLGWILL 190 (266)
T ss_dssp EEEEETTEEEEEETT-S--SEEEEEET----TTCCEEEEEEC
T ss_pred eEEEECCEEEEecCC-C--CeEEEEEC----CCCcEEEEEEC
Confidence 233337887755433 2 26777763 34556666665
No 120
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=26.99 E-value=3.4e+02 Score=24.20 Aligned_cols=213 Identities=12% Similarity=-0.017 Sum_probs=0.0
Q ss_pred eEEEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCC------------------CCCeEEE
Q 015251 120 FDAVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPV------------------SKEYKVI 181 (410)
Q Consensus 120 ~~~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~------------------~~~ykvv 181 (410)
..+.-+-+|-.++... ..+.+.|||..+++....-.....+. .....+.+.+. +.+-+.+
T Consensus 185 ~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSAS-LDGTIRLWECGTGTTIHTFNRKENPH-DGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp EEEEEETTTTEEEEEE-TTSCEEEEETTTTEEEEEECBTTBTT-CCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE
T ss_pred EEEEEcCCCCEEEEEc-CCCcEEEeECCCCceeEEeecCCCCC-CCccEEEEecCCcceeeecccCcccceEEcCCCCEE
Q ss_pred EEEEEecCCCCCccccccccccCCceEEEEEeCCCceeecCCCCceeecCCcceEECCe-EEEEecCCCCCCCceEEEEE
Q 015251 182 KIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGR-LHWVTRPRRYSPVRGIVSFD 260 (410)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~Il~fD 260 (410)
....... .+.+|+.+++.-...-..........-...-+|. +...... .+.|..+|
T Consensus 263 ~~~~~dg------------------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~-----dg~i~vwd 319 (420)
T 3vl1_A 263 IAGHVSG------------------VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE-----NGMLAQWD 319 (420)
T ss_dssp EEEETTS------------------CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET-----TSEEEEEE
T ss_pred EEEcCCC------------------eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC-----CCeEEEEE
Q ss_pred cCCceeeEEcCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchh
Q 015251 261 IADEQFREVPKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKI 340 (410)
Q Consensus 261 l~~e~~~~i~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~ 340 (410)
+.+.+-....+.. ........+...+|.+.+.... +..+.||.+.+.+....-...........+.-
T Consensus 320 ~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~---------- 386 (420)
T 3vl1_A 320 LRSPECPVGEFLI--NEGTPINNVYFAAGALFVSSGF-DTSIKLDIISDPESERPAIEFETPTFLVSNDD---------- 386 (420)
T ss_dssp TTCTTSCSEEEEE--STTSCEEEEEEETTEEEEEETT-TEEEEEEEECCTTCCSCEECTTSCEEECCSSC----------
T ss_pred cCCCcCchhhhhc--cCCCCceEEEeCCCCEEEEecC-CccEEEEeccCCCCCccceeccCccEEccCCc----------
Q ss_pred hcccCCCceeEEEEEccCCc----EEEEecCCEEEEEeCCCC
Q 015251 341 WKNSLNGRVVRVVCILEKGE----ILLEYKSRVLVSYDPKRR 378 (410)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~g~----il~~~~~~~l~~yd~~~~ 378 (410)
.+.-+++..+|. ++.....+.+..|+++.+
T Consensus 387 --------~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 387 --------AVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp --------CCCEEEEECCSSSSCEEEEEETTTEEEEEESCC-
T ss_pred --------ceEEEEEccCCCCcceEEEEcCCceEEEEeccCC
No 121
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=26.68 E-value=3.1e+02 Score=23.71 Aligned_cols=30 Identities=3% Similarity=0.166 Sum_probs=22.3
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCC
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKP 272 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP 272 (410)
+|.++|.... .+.|..||..+.++..+..+
T Consensus 29 ~g~~l~v~~~-----~~~i~~~~~~~~~~~~~~~~ 58 (322)
T 2fp8_A 29 TNKGFYTSVQ-----DGRVIKYEGPNSGFVDFAYA 58 (322)
T ss_dssp TCSSEEEECT-----TSEEEEECCTTTCEEEEEES
T ss_pred CCCEEEEEcC-----CCeEEEECCCCCceEEEecc
Confidence 5787887654 37899999998877766443
No 122
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=26.33 E-value=3.1e+02 Score=23.58 Aligned_cols=203 Identities=10% Similarity=0.010 Sum_probs=98.7
Q ss_pred EeccCceEEEeeccCCceEEEEcccccceee-CCCCC--CC--CCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccc
Q 015251 123 VGSCNGLLCLSDSLFNDAICIYNPFTRDYIE-LPKSM--QY--PDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQR 197 (410)
Q Consensus 123 ~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~-LP~~~--~~--~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 197 (410)
+...+..+.+... ..+.+.++|+.|++... ++... .. .......++.+++..+ + ++.. ....
T Consensus 96 ~s~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~-l~~~-~~~~--------- 162 (353)
T 3vgz_A 96 INNTTQTLWFGNT-VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-T-VYIS-GIGK--------- 162 (353)
T ss_dssp EETTTTEEEEEET-TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-E-EEEE-EESS---------
T ss_pred ECCCCCEEEEEec-CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-E-EEEE-ecCC---------
Confidence 3444444555443 34689999999988633 33321 10 0012356678887643 2 2222 1111
Q ss_pred ccccccCCceEEEEEeCCCcee-ecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCceee-EEcCCCCC
Q 015251 198 TRRVIYPRSDVQVYTVGSPAWR-SKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQFR-EVPKPDCG 275 (410)
Q Consensus 198 ~~~~~~~~~~~~Vyss~t~~Wr-~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i~lP~~~ 275 (410)
...+.+++..+++=. .+...... ...-.+.-+|...++... .+.|..+|+.+.+.. .++.+...
T Consensus 163 -------~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~ 228 (353)
T 3vgz_A 163 -------ESVIWVVDGGNIKLKTAIQNTGKM--STGLALDSEGKRLYTTNA-----DGELITIDTADNKILSRKKLLDDG 228 (353)
T ss_dssp -------SCEEEEEETTTTEEEEEECCCCTT--CCCCEEETTTTEEEEECT-----TSEEEEEETTTTEEEEEEECCCSS
T ss_pred -------CceEEEEcCCCCceEEEecCCCCc--cceEEECCCCCEEEEEcC-----CCeEEEEECCCCeEEEEEEcCCCC
Confidence 156888888776322 12100000 011122235554444433 368999999887653 45553211
Q ss_pred CCCCcceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEE
Q 015251 276 GLNRCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVC 354 (410)
Q Consensus 276 ~~~~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (410)
. ......+... +|+..++.......+.+|-++. ......+... . + .-+.
T Consensus 229 ~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~--~--------~-------------~~~~ 278 (353)
T 3vgz_A 229 K-EHFFINISLDTARQRAFITDSKAAEVLVVDTRN------GNILAKVAAP--E--------S-------------LAVL 278 (353)
T ss_dssp S-CCCEEEEEEETTTTEEEEEESSSSEEEEEETTT------CCEEEEEECS--S--------C-------------CCEE
T ss_pred C-CcccceEEECCCCCEEEEEeCCCCEEEEEECCC------CcEEEEEEcC--C--------C-------------ceEE
Confidence 1 1111223332 4654344433346777775532 1222333321 0 0 0135
Q ss_pred EccCCcE-EEEe-cCCEEEEEeCCCCcEEE
Q 015251 355 ILEKGEI-LLEY-KSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 355 ~~~~g~i-l~~~-~~~~l~~yd~~~~~~~~ 382 (410)
+..+|+. ++.. .++.+..||.++++...
T Consensus 279 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 279 FNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 5667764 4443 46789999999887654
No 123
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=25.17 E-value=5.1e+02 Score=25.69 Aligned_cols=178 Identities=9% Similarity=0.044 Sum_probs=88.1
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCC-
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSP- 216 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~- 216 (410)
.+.+.|||..|++....-... ......+.+.|.. .+ ++ ... . ...+.+|+..++
T Consensus 76 dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~s~~~-~~-l~-~~~--~----------------dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 76 DFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHPTK-PY-VL-SGS--D----------------DLTVKLWNWENNW 130 (814)
T ss_dssp TSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSS-SE-EE-EEE--T----------------TSEEEEEEGGGTS
T ss_pred CCeEEEEECCCCcEEEEEecC----CCCEEEEEEeCCC-CE-EE-EEc--C----------------CCEEEEEECCCCc
Confidence 578999999888765422111 1234566776643 22 22 211 1 257888888765
Q ss_pred ceeec-CCCCceeecCCcceEE---CCeEEEEecCCCCCCCceEEEEEcCCceee-EEcCCCCCCCCCcceEEEEe---C
Q 015251 217 AWRSK-GKLAYQFVRRPSEALV---KGRLHWVTRPRRYSPVRGIVSFDIADEQFR-EVPKPDCGGLNRCNYHLTVL---S 288 (410)
Q Consensus 217 ~Wr~~-~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i~lP~~~~~~~~~~~l~~~---~ 288 (410)
..... ..-...+ .++.+ +|.+...+.. .+.|..+|+.+.+-. .+..+.... ...+.-. +
T Consensus 131 ~~~~~~~~~~~~v----~~~~~~p~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~~~~----v~~~~~~~~~~ 197 (814)
T 3mkq_A 131 ALEQTFEGHEHFV----MCVAFNPKDPSTFASGCL-----DRTVKVWSLGQSTPNFTLTTGQERG----VNYVDYYPLPD 197 (814)
T ss_dssp EEEEEEECCSSCE----EEEEEETTEEEEEEEEET-----TSEEEEEETTCSSCSEEEECCCTTC----CCEEEECCSTT
T ss_pred eEEEEEcCCCCcE----EEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCcceeEEecCCCCC----EEEEEEEECCC
Confidence 22211 1101000 11222 3444333333 267889998765432 222221111 1122222 5
Q ss_pred CeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE-ecC
Q 015251 289 GCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE-YKS 367 (410)
Q Consensus 289 G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~~ 367 (410)
|.+.++.. ....+.+|-+.. ......+... ...+.-+.+..+|.+++. ..+
T Consensus 198 ~~~l~~~~-~dg~i~~~d~~~------~~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~~~d 249 (814)
T 3mkq_A 198 KPYMITAS-DDLTIKIWDYQT------KSCVATLEGH---------------------MSNVSFAVFHPTLPIIISGSED 249 (814)
T ss_dssp CCEEEEEC-TTSEEEEEETTT------TEEEEEEECC---------------------SSCEEEEEECSSSSEEEEEETT
T ss_pred CCEEEEEe-CCCEEEEEECCC------CcEEEEEcCC---------------------CCCEEEEEEcCCCCEEEEEeCC
Confidence 55555544 467899997643 1122222210 013445666677776655 445
Q ss_pred CEEEEEeCCCCcEE
Q 015251 368 RVLVSYDPKRRTFN 381 (410)
Q Consensus 368 ~~l~~yd~~~~~~~ 381 (410)
+.+..||..+++..
T Consensus 250 g~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 250 GTLKIWNSSTYKVE 263 (814)
T ss_dssp SCEEEEETTTCSEE
T ss_pred CeEEEEECCCCcEE
Confidence 77888998876654
No 124
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=24.65 E-value=3.9e+02 Score=24.16 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=22.3
Q ss_pred EECCeEEEEecCCCCCCCceEEEEEc-CCceeeEEcCC
Q 015251 236 LVKGRLHWVTRPRRYSPVRGIVSFDI-ADEQFREVPKP 272 (410)
Q Consensus 236 ~~~G~lyw~~~~~~~~~~~~Il~fDl-~~e~~~~i~lP 272 (410)
+.+|.+||.... .+.|..+|. ..+.-..|..+
T Consensus 296 v~~~~ly~td~~-----~~~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 296 VFEDSLYWTDWH-----TKSINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EETTEEEEEETT-----TTEEEEEETTTCCSCEEEECS
T ss_pred EECCEEEEeeCC-----CCeEEEEECCCCcceEEEccC
Confidence 378899999876 578999994 44444555433
No 125
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=24.62 E-value=3.1e+02 Score=22.90 Aligned_cols=198 Identities=12% Similarity=0.074 Sum_probs=96.7
Q ss_pred EEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccc
Q 015251 122 AVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRV 201 (410)
Q Consensus 122 ~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 201 (410)
+....+|-+.+... ....++++||. ++...++.+... ....++.+++.. . +... . ..
T Consensus 67 i~~~~~g~l~v~~~-~~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g-~--l~v~-~-~~------------- 123 (300)
T 2qc5_A 67 LIVSSLGDIWFTEN-GANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNG-D--IWFT-Q-LN------------- 123 (300)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTT-C--EEEE-E-TT-------------
T ss_pred EEECCCCCEEEEec-CCCeEEEECCC-CCeEEecCCCCC---CCCccceECCCC-C--EEEE-c-cC-------------
Confidence 44445676655542 24678999998 666544322111 234567777542 2 2221 1 00
Q ss_pred ccCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCCC
Q 015251 202 IYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLNR 279 (410)
Q Consensus 202 ~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~~ 279 (410)
...+..|+.. ++...... +... ....++.+ +|.+|+.... ...|..||. +.++..+.+|....
T Consensus 124 ---~~~i~~~~~~-g~~~~~~~-~~~~-~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~--- 188 (300)
T 2qc5_A 124 ---GDRIGKLTAD-GTIYEYDL-PNKG-SYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLPTNAA--- 188 (300)
T ss_dssp ---TTEEEEECTT-SCEEEEEC-SSTT-CCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTTC---
T ss_pred ---CCeEEEECCC-CCEEEccC-CCCC-CCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCCCCCC---
Confidence 1345556555 44433211 1000 01112233 5777665543 368999999 66666666653211
Q ss_pred cceEEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccC
Q 015251 280 CNYHLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEK 358 (410)
Q Consensus 280 ~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (410)
....+..- +|.|++.... ...+.+ ++.. ..... ..+ +.. .....-+++..+
T Consensus 189 ~~~~i~~d~~g~l~v~~~~-~~~i~~--~~~~---g~~~~-~~~----~~~-----------------~~~~~~i~~d~~ 240 (300)
T 2qc5_A 189 APVGITSGNDGALWFVEIM-GNKIGR--ITTT---GEISE-YDI----PTP-----------------NARPHAITAGKN 240 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-TTEEEE--ECTT---CCEEE-EEC----SST-----------------TCCEEEEEECST
T ss_pred CcceEEECCCCCEEEEccC-CCEEEE--EcCC---CcEEE-EEC----CCC-----------------CCCceEEEECCC
Confidence 12233332 5677665432 233433 3321 22222 111 100 012234566677
Q ss_pred CcEEEEec-CCEEEEEeCCCCcEEEEEEe
Q 015251 359 GEILLEYK-SRVLVSYDPKRRTFNEFVFK 386 (410)
Q Consensus 359 g~il~~~~-~~~l~~yd~~~~~~~~v~~~ 386 (410)
|.+++... ...+..||+ +++++.+.+.
T Consensus 241 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 268 (300)
T 2qc5_A 241 SEIWFTEWGANQIGRITN-DNTIQEYQLQ 268 (300)
T ss_dssp TCEEEEETTTTEEEEECT-TSCEEEEECC
T ss_pred CCEEEeccCCCeEEEECC-CCcEEEEECC
Confidence 88777653 478999999 5666655443
No 126
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=24.33 E-value=3.3e+02 Score=23.23 Aligned_cols=195 Identities=7% Similarity=-0.079 Sum_probs=95.3
Q ss_pred CCceEEEEcc-cccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCC
Q 015251 137 FNDAICIYNP-FTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGS 215 (410)
Q Consensus 137 ~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t 215 (410)
..+.+.+||. .+++...+.... ....+..+.+.+ +.+-+..- . ...+.+++.++
T Consensus 77 ~dg~i~~wd~~~~~~~~~~~~~~---~~~~v~~l~~~~--~~~l~s~~----~----------------d~~i~iwd~~~ 131 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSFQALTNNE---ANLGICRICKYG--DDKLIAAS----W----------------DGLIEVIDPRN 131 (342)
T ss_dssp TTSCEEEECSSSSSSEEECBSCC---CCSCEEEEEEET--TTEEEEEE----T----------------TSEEEEECHHH
T ss_pred CCCeEEEEEeccCCceEeccccC---CCCceEEEEeCC--CCEEEEEc----C----------------CCeEEEEcccc
Confidence 3578999999 888887765421 113455677777 34333221 1 14677777664
Q ss_pred Cc-------eeecCCCCceeecCCcceEECCe-EEEEecCCCCCCCceEEEEEcCC-ce--eeEEcCCCCCCCCCcceEE
Q 015251 216 PA-------WRSKGKLAYQFVRRPSEALVKGR-LHWVTRPRRYSPVRGIVSFDIAD-EQ--FREVPKPDCGGLNRCNYHL 284 (410)
Q Consensus 216 ~~-------Wr~~~~~p~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~Il~fDl~~-e~--~~~i~lP~~~~~~~~~~~l 284 (410)
.. .+.+...... ..-.++.+++. +..... .+.|..||+.+ .. ......+... ....+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~----~i~~i 199 (342)
T 1yfq_A 132 YGDGVIAVKNLNSNNTKVK--NKIFTMDTNSSRLIVGMN------NSQVQWFRLPLCEDDNGTIEESGLKY----QIRDV 199 (342)
T ss_dssp HTTBCEEEEESCSSSSSSC--CCEEEEEECSSEEEEEES------TTEEEEEESSCCTTCCCEEEECSCSS----CEEEE
T ss_pred cccccccccCCeeeEEeeC--CceEEEEecCCcEEEEeC------CCeEEEEECCccccccceeeecCCCC----ceeEE
Confidence 00 1111111110 00112222222 222222 26899999987 32 3333332211 11233
Q ss_pred EEe--CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEE
Q 015251 285 TVL--SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEIL 362 (410)
Q Consensus 285 ~~~--~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il 362 (410)
... +|.+.++.. ....+.||.++..+..........+....... . + ......+.-+++..+|.++
T Consensus 200 ~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~--~--~--------~~~~~~i~~~~~s~~~~~l 266 (342)
T 1yfq_A 200 ALLPKEQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL--K--D--------TNLAYPVNSIEFSPRHKFL 266 (342)
T ss_dssp EECSGGGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCT--T--C--------CSSCCCEEEEEECTTTCCE
T ss_pred EECCCCCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccc--c--c--------cccceeEEEEEEcCCCCEE
Confidence 333 466655554 37789999987642111122222222210000 0 0 0001135556777777765
Q ss_pred EE-ecCCEEEEEeCCCCcEE
Q 015251 363 LE-YKSRVLVSYDPKRRTFN 381 (410)
Q Consensus 363 ~~-~~~~~l~~yd~~~~~~~ 381 (410)
+. ..++.+..||.++++..
T Consensus 267 ~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 267 YTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EEEETTSCEEEEETTTTEEE
T ss_pred EEecCCceEEEEcCccHhHh
Confidence 54 55678999999988753
No 127
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=24.32 E-value=5.8e+02 Score=26.02 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=37.8
Q ss_pred CCeEEEEecCCCCCCCceEEEEEcCCceeeEE-cCCCCCCCCCcceEEEEeCCeEEEEEeCCCCeEEEEEEee
Q 015251 238 KGRLHWVTRPRRYSPVRGIVSFDIADEQFREV-PKPDCGGLNRCNYHLTVLSGCLSVAVYGNYGKLEIWVMKD 309 (410)
Q Consensus 238 ~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i-~lP~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~IW~l~~ 309 (410)
+|.|||.... ...|.++|+....-..+ ..+.. -.....|...+++|+..... .-.||+.+.
T Consensus 569 ~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~---l~~P~glav~~~~lYwtD~~---~~~I~~~dk 630 (791)
T 3m0c_C 569 SGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKR---LAHPFSLAVFEDKVFWTDII---NEAIFSANR 630 (791)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTT---TSSEEEEEEETTEEEEEETT---TTEEEEEET
T ss_pred CCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCc---cCCCCEEEEeCCEEEEEECC---CCEEEEEeC
Confidence 5899999765 47899999977654444 22110 11234577788888776533 345566653
No 128
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=23.60 E-value=3.6e+02 Score=23.40 Aligned_cols=150 Identities=10% Similarity=0.031 Sum_probs=75.7
Q ss_pred EEEeccCceEEEeeccCCceEEEEcccccceee-CCCCCCCCCCceEEEEEEeCC-CCCeEEEEEEEEecCCCCCccccc
Q 015251 121 DAVGSCNGLLCLSDSLFNDAICIYNPFTRDYIE-LPKSMQYPDQEVVFGFGFHPV-SKEYKVIKIVYYRKSCSNSSFQRT 198 (410)
Q Consensus 121 ~~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~-~~~ykvv~~~~~~~~~~~~~~~~~ 198 (410)
-+.++.+|-+.+.+. .....++|..+++... +.... ......+.++|. .+.+-+.. . .
T Consensus 88 ~~s~s~D~~i~~w~~--~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~--s--~---------- 147 (343)
T 3lrv_A 88 IISRGPCNRLLLLYP--GNQITILDSKTNKVLREIEVDS----ANEIIYMYGHNEVNTEYFIWA--D--N---------- 147 (343)
T ss_dssp EEEECSTTEEEEEET--TTEEEEEETTTCCEEEEEECCC----SSCEEEEECCC---CCEEEEE--E--T----------
T ss_pred eEEecCCCeEEEEEc--cCceEEeecCCcceeEEeecCC----CCCEEEEEcCCCCCCCEEEEE--e--C----------
Confidence 456777888877653 4577888888887332 22111 123556677773 23332222 1 1
Q ss_pred cccccCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceee--EEcCCCC
Q 015251 199 RRVIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFR--EVPKPDC 274 (410)
Q Consensus 199 ~~~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~--~i~lP~~ 274 (410)
...+.+|+.+++.-.......... .-.++.+ +|.+...+.. .+.|..+|+.+.+-. .+... +
T Consensus 148 ------dg~i~~wd~~~~~~~~~~~~~~~~--~i~~~~~~pdg~~lasg~~-----dg~i~iwd~~~~~~~~~~~~~~-h 213 (343)
T 3lrv_A 148 ------RGTIGFQSYEDDSQYIVHSAKSDV--EYSSGVLHKDSLLLALYSP-----DGILDVYNLSSPDQASSRFPVD-E 213 (343)
T ss_dssp ------TCCEEEEESSSSCEEEEECCCSSC--CCCEEEECTTSCEEEEECT-----TSCEEEEESSCTTSCCEECCCC-T
T ss_pred ------CCcEEEEECCCCcEEEEEecCCCC--ceEEEEECCCCCEEEEEcC-----CCEEEEEECCCCCCCccEEecc-C
Confidence 257888888877543221111000 0111111 4554444333 368999999876543 23321 1
Q ss_pred CCCCCcceEEEEe-CCeEEEEEeCCCCeEEEEEEee
Q 015251 275 GGLNRCNYHLTVL-SGCLSVAVYGNYGKLEIWVMKD 309 (410)
Q Consensus 275 ~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~IW~l~~ 309 (410)
. ..-..+.-. +|...+.... . .+.||-+..
T Consensus 214 ~---~~v~~l~fs~~g~~l~s~~~-~-~v~iwd~~~ 244 (343)
T 3lrv_A 214 E---AKIKEVKFADNGYWMVVECD-Q-TVVCFDLRK 244 (343)
T ss_dssp T---SCEEEEEECTTSSEEEEEES-S-BEEEEETTS
T ss_pred C---CCEEEEEEeCCCCEEEEEeC-C-eEEEEEcCC
Confidence 1 111122222 5665555553 3 999998865
No 129
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=23.60 E-value=3.6e+02 Score=23.32 Aligned_cols=134 Identities=11% Similarity=0.046 Sum_probs=75.8
Q ss_pred CceEEEeeccC-CceEEEEcccccceee-CCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccC
Q 015251 127 NGLLCLSDSLF-NDAICIYNPFTRDYIE-LPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYP 204 (410)
Q Consensus 127 ~Gll~l~~~~~-~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 204 (410)
+|.|....+.. .+.+.++|+.|++... +|.++. ....|+..+.. ++..+.. .
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~----~FgeGit~~g~----~ly~ltw------------------~ 105 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR----YFGEGISDWKD----KIVGLTW------------------K 105 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT----CCEEEEEEETT----EEEEEES------------------S
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc----cceeEEEEeCC----EEEEEEe------------------e
Confidence 68776665422 3589999999998644 333221 23445555532 5555421 1
Q ss_pred CceEEEEEeCCCcee-ecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCC-ceeeEEcCCCCCCCCCcce
Q 015251 205 RSDVQVYTVGSPAWR-SKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIAD-EQFREVPKPDCGGLNRCNY 282 (410)
Q Consensus 205 ~~~~~Vyss~t~~Wr-~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~-e~~~~i~lP~~~~~~~~~~ 282 (410)
...+.||+..+.+=. +++. . ...-++..+|...|++.. .+.|..+|+++ +.-+.|++..... .....
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~---~--~eG~glt~dg~~L~~SdG-----s~~i~~iDp~T~~v~~~I~V~~~g~-~~~~l 174 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNY---D--GEGWGLTHNDQYLIMSDG-----TPVLRFLDPESLTPVRTITVTAHGE-ELPEL 174 (262)
T ss_dssp SSEEEEEETTTCCEEEEEEC---S--SCCCCEEECSSCEEECCS-----SSEEEEECTTTCSEEEEEECEETTE-ECCCE
T ss_pred CCEEEEEECccCcEEEEEEC---C--CCceEEecCCCEEEEECC-----CCeEEEEcCCCCeEEEEEEeccCCc-ccccc
Confidence 267889998887543 2221 1 133456677776666643 47899999987 4456676642110 00111
Q ss_pred -EEEEeCCeEEEEEeC
Q 015251 283 -HLTVLSGCLSVAVYG 297 (410)
Q Consensus 283 -~l~~~~G~L~~~~~~ 297 (410)
.|...+|+|++-...
T Consensus 175 NELe~~~G~lyan~w~ 190 (262)
T 3nol_A 175 NELEWVDGEIFANVWQ 190 (262)
T ss_dssp EEEEEETTEEEEEETT
T ss_pred ceeEEECCEEEEEEcc
Confidence 244458887765543
No 130
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=22.95 E-value=71 Score=24.71 Aligned_cols=29 Identities=10% Similarity=0.263 Sum_probs=22.2
Q ss_pred cEEEEecCCEEEEEeCCCCcEEEEEEeCC
Q 015251 360 EILLEYKSRVLVSYDPKRRTFNEFVFKGT 388 (410)
Q Consensus 360 ~il~~~~~~~l~~yd~~~~~~~~v~~~~~ 388 (410)
+|+.....-.++.||..+++|++..++|.
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG~ 58 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEGA 58 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcce
Confidence 45555554567888999999999998875
No 131
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=22.62 E-value=1.6e+02 Score=22.84 Aligned_cols=77 Identities=18% Similarity=0.197 Sum_probs=48.4
Q ss_pred CceEEEeecc-CCceEEEEcccccceeeCCC--CCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccccc
Q 015251 127 NGLLCLSDSL-FNDAICIYNPFTRDYIELPK--SMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIY 203 (410)
Q Consensus 127 ~Gll~l~~~~-~~~~~~V~NP~T~~~~~LP~--~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 203 (410)
+=+||+++.. .=..+|.+||.+.+..+|=. |...........+-||..+..|+.|--. . +
T Consensus 55 hFlILfrd~~~qfRalY~~~~~~e~~~Ki~G~GP~~i~~~mV~~~~KYdSg~K~F~~i~sk---~------~-------- 117 (141)
T 1ugj_A 55 HFLILFRDSSCQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKYNSDRKRFTQIPAK---T------M-------- 117 (141)
T ss_dssp CEEEEESSSSCSEEEEEEECTTSSCEEEEESSSCSEECTTTEEEEEEEETTTTEEEECSSS---S------C--------
T ss_pred eEEEEEecCCCceEEEEEEeCCCceEEEEECCCcCcccHHHHHHHhccCCCCceecccCcc---c------c--------
Confidence 3355666431 12479999999988877632 3222233566677899999999876521 1 0
Q ss_pred CCceEEEEEeCCCceeec
Q 015251 204 PRSDVQVYTVGSPAWRSK 221 (410)
Q Consensus 204 ~~~~~~Vyss~t~~Wr~~ 221 (410)
...+..+++...-|..-
T Consensus 118 -s~tvDAvtl~~~~w~~k 134 (141)
T 1ugj_A 118 -SMSVDAFTIQGHLWQSK 134 (141)
T ss_dssp -CTTCSEEEECSTTTSCS
T ss_pred -ceeEEEEEEhhHhhcCC
Confidence 14566677788888643
No 132
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=22.37 E-value=5.8e+02 Score=25.28 Aligned_cols=53 Identities=17% Similarity=0.212 Sum_probs=31.9
Q ss_pred eEEEEEeCCC--ceeecCCCCce-----e--ecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCce
Q 015251 207 DVQVYTVGSP--AWRSKGKLAYQ-----F--VRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ 265 (410)
Q Consensus 207 ~~~Vyss~t~--~Wr~~~~~p~~-----~--~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~ 265 (410)
.+..++..|+ .|+.-...+.. . ......++.+|.+|.-... ..|+++|..+.+
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d------g~l~alD~~tG~ 149 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD------GRLIALDAATGK 149 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT------SEEEEEETTTCC
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC------CEEEEEECCCCC
Confidence 4555666666 57754322111 0 1123345678999987655 789999997654
No 133
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.24 E-value=75 Score=21.62 Aligned_cols=19 Identities=16% Similarity=0.249 Sum_probs=15.1
Q ss_pred EEEEecCCEEEEEeCCCCc
Q 015251 361 ILLEYKSRVLVSYDPKRRT 379 (410)
Q Consensus 361 il~~~~~~~l~~yd~~~~~ 379 (410)
.+....+++.|.||..|++
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp EEEEESSSCEEEEETTTTE
T ss_pred EEEECCCCCEEEecCcccc
Confidence 4445677889999999986
No 134
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=22.07 E-value=5.9e+02 Score=25.28 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=51.7
Q ss_pred eEEEEEeCCC--ceeecCCCCcee-------ecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCce--eeEEcC-CCC
Q 015251 207 DVQVYTVGSP--AWRSKGKLAYQF-------VRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ--FREVPK-PDC 274 (410)
Q Consensus 207 ~~~Vyss~t~--~Wr~~~~~p~~~-------~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~--~~~i~l-P~~ 274 (410)
.+..++..|+ .|+.-...+... ......++.+|.+|.-+.. ..|+++|.++.+ |+.-.. ...
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d------g~l~AlDa~TG~~~W~~~~~~~~~ 154 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD------GRLEAIDAKTGQRAWSVDTRADHK 154 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCSCTT
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC------CEEEEEECCCCCEeeeecCcCCCC
Confidence 4555666666 587543222110 0122346788999987755 789999997654 554322 111
Q ss_pred CCCCCcceEEEEeCCeEEEEEeCCC--CeEEEEEEeeCCCCCceeeE
Q 015251 275 GGLNRCNYHLTVLSGCLSVAVYGNY--GKLEIWVMKDYNVKESWAKE 319 (410)
Q Consensus 275 ~~~~~~~~~l~~~~G~L~~~~~~~~--~~l~IW~l~~~~~~~~W~~~ 319 (410)
.. ......-+..+|.+++...... ..=.|+.++-...+..|...
T Consensus 155 ~~-~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 155 RS-YTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SC-CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CC-ccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 10 1111122345776654322100 12245555532225667753
No 135
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=21.87 E-value=4.2e+02 Score=23.54 Aligned_cols=199 Identities=10% Similarity=0.040 Sum_probs=99.3
Q ss_pred CceEEEeeccCCceEEEEcccccceeeCC-CCC--CCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCcccccccccc
Q 015251 127 NGLLCLSDSLFNDAICIYNPFTRDYIELP-KSM--QYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIY 203 (410)
Q Consensus 127 ~Gll~l~~~~~~~~~~V~NP~T~~~~~LP-~~~--~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 203 (410)
+|-+++..+ ..+.+.|||..+++...-. .+. .......+..+.+.|....+ ++.. . .
T Consensus 93 ~~~~l~s~s-~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~-l~s~-~--~--------------- 152 (402)
T 2aq5_A 93 NDNVIASGS-EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNV-LLSA-G--C--------------- 152 (402)
T ss_dssp CTTEEEEEE-TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTE-EEEE-E--T---------------
T ss_pred CCCEEEEEe-CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCE-EEEE-c--C---------------
Confidence 454433332 3568999998887542210 000 00111345566777754332 2221 1 1
Q ss_pred CCceEEEEEeCCCceeecC---CCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceee-EE-cCCCCCC
Q 015251 204 PRSDVQVYTVGSPAWRSKG---KLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFR-EV-PKPDCGG 276 (410)
Q Consensus 204 ~~~~~~Vyss~t~~Wr~~~---~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i-~lP~~~~ 276 (410)
...+.+++.+++.....- .-...+ .++.+ +|.+...+.. .+.|..+|+.+.+-. .+ ......
T Consensus 153 -dg~i~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~- 221 (402)
T 2aq5_A 153 -DNVILVWDVGTGAAVLTLGPDVHPDTI----YSVDWSRDGALICTSCR-----DKRVRVIEPRKGTVVAEKDRPHEGT- 221 (402)
T ss_dssp -TSCEEEEETTTTEEEEEECTTTCCSCE----EEEEECTTSSCEEEEET-----TSEEEEEETTTTEEEEEEECSSCSS-
T ss_pred -CCEEEEEECCCCCccEEEecCCCCCce----EEEEECCCCCEEEEEec-----CCcEEEEeCCCCceeeeeccCCCCC-
Confidence 256888998887543221 111111 11222 4544333332 268999999876543 33 222111
Q ss_pred CCCcceEEEE-eCCeEEEEEe--CCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEE
Q 015251 277 LNRCNYHLTV-LSGCLSVAVY--GNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVV 353 (410)
Q Consensus 277 ~~~~~~~l~~-~~G~L~~~~~--~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (410)
....+.- -+|.+.++.+ ..+..+.||-+.... . =.....++. ...+.-+
T Consensus 222 ---~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~--~-~~~~~~~~~----------------------~~~v~~~ 273 (402)
T 2aq5_A 222 ---RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE--E-PLSLQELDT----------------------SSGVLLP 273 (402)
T ss_dssp ---SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS--S-CSEEEECCC----------------------CSSCEEE
T ss_pred ---cceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc--C-CceEEeccC----------------------CCceeEE
Confidence 0112222 3577666653 346789999886532 1 111122211 0123345
Q ss_pred EEccCCcEEEEe--cCCEEEEEeCCCCc--EEEEE
Q 015251 354 CILEKGEILLEY--KSRVLVSYDPKRRT--FNEFV 384 (410)
Q Consensus 354 ~~~~~g~il~~~--~~~~l~~yd~~~~~--~~~v~ 384 (410)
.+..+|..++.. .++.+..||..+++ ++.+.
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 666778776543 46789999999887 65554
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=21.42 E-value=3.8e+02 Score=22.82 Aligned_cols=107 Identities=12% Similarity=-0.046 Sum_probs=54.7
Q ss_pred CeEEEEecCCCCCCCceEEEEEcCCceee-EEcCCCCCCCCCcceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCce
Q 015251 239 GRLHWVTRPRRYSPVRGIVSFDIADEQFR-EVPKPDCGGLNRCNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESW 316 (410)
Q Consensus 239 G~lyw~~~~~~~~~~~~Il~fDl~~e~~~-~i~lP~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W 316 (410)
+.+|..... .+.|..||+.+.+.. .+..+. ....+.. -+|+..++.......+.+|-++.. + -
T Consensus 10 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~--~--~ 74 (331)
T 3u4y_A 10 NFGIVVEQH-----LRRISFFSTDTLEILNQITLGY------DFVDTAITSDCSNVVVTSDFCQTLVQIETQLE--P--P 74 (331)
T ss_dssp CEEEEEEGG-----GTEEEEEETTTCCEEEEEECCC------CEEEEEECSSSCEEEEEESTTCEEEEEECSSS--S--C
T ss_pred CEEEEEecC-----CCeEEEEeCcccceeeeEEccC------CcceEEEcCCCCEEEEEeCCCCeEEEEECCCC--c--e
Confidence 445555544 468999999988764 445442 1123333 256644444433456666655431 1 1
Q ss_pred eeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEEecCC----EEEEEeCCCCcEEE
Q 015251 317 AKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLEYKSR----VLVSYDPKRRTFNE 382 (410)
Q Consensus 317 ~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~----~l~~yd~~~~~~~~ 382 (410)
....+... .. ...-+++..+|+.++..... .+..||+++++...
T Consensus 75 -~~~~~~~~---------~~------------~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 75 -KVVAIQEG---------QS------------SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp -EEEEEEEC---------SS------------CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE
T ss_pred -eEEecccC---------CC------------CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE
Confidence 12222210 00 01113556677766543333 78888888877644
No 137
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=21.33 E-value=3.8e+02 Score=22.81 Aligned_cols=140 Identities=15% Similarity=0.107 Sum_probs=77.7
Q ss_pred ceEEEEEeCCCceeecCCCCceeecCCcceEECCeEEEEecCCCCCCCceEEEEEcCCce-eeEEcCCCCCCCCCcceEE
Q 015251 206 SDVQVYTVGSPAWRSKGKLAYQFVRRPSEALVKGRLHWVTRPRRYSPVRGIVSFDIADEQ-FREVPKPDCGGLNRCNYHL 284 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~Il~fDl~~e~-~~~i~lP~~~~~~~~~~~l 284 (410)
..+.+++..+++=...-.++...... .-...++.+|-+++. .+.+.+||..+-+ -..|+.|.. ..-|
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fge-Gi~~~~~~ly~ltw~-----~~~v~v~D~~tl~~~~ti~~~~~------Gwgl 110 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGA-GIVAWRDRLIQLTWR-----NHEGFVYDLATLTPRARFRYPGE------GWAL 110 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEE-EEEEETTEEEEEESS-----SSEEEEEETTTTEEEEEEECSSC------CCEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCccee-EEEEeCCEEEEEEee-----CCEEEEEECCcCcEEEEEeCCCC------ceEE
Confidence 68899999998543222222221111 123567899999877 5799999998754 466777631 2344
Q ss_pred EEeCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE
Q 015251 285 TVLSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE 364 (410)
Q Consensus 285 ~~~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~ 364 (410)
..-+++|++... .=.|++++-. .=....+|.... . +.|+ ..+.-+. ..+|+++..
T Consensus 111 t~dg~~L~vSdg----s~~l~~iDp~----t~~~~~~I~V~~-~------g~~~---------~~lNeLe-~~~G~lyan 165 (243)
T 3mbr_X 111 TSDDSHLYMSDG----TAVIRKLDPD----TLQQVGSIKVTA-G------GRPL---------DNLNELE-WVNGELLAN 165 (243)
T ss_dssp EECSSCEEEECS----SSEEEEECTT----TCCEEEEEECEE-T------TEEC---------CCEEEEE-EETTEEEEE
T ss_pred eeCCCEEEEECC----CCeEEEEeCC----CCeEEEEEEEcc-C------Cccc---------ccceeeE-EeCCEEEEE
Confidence 444556666532 2247777642 122344444410 0 0000 0111111 126777665
Q ss_pred e-cCCEEEEEeCCCCcEEE
Q 015251 365 Y-KSRVLVSYDPKRRTFNE 382 (410)
Q Consensus 365 ~-~~~~l~~yd~~~~~~~~ 382 (410)
. .+..+...|++|++...
T Consensus 166 vw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp ETTTTEEEEECTTTCBEEE
T ss_pred ECCCCeEEEEECCCCCEEE
Confidence 4 35678899999988754
No 138
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=21.28 E-value=4e+02 Score=23.02 Aligned_cols=138 Identities=9% Similarity=0.014 Sum_probs=71.3
Q ss_pred ceEEEEEeCCCceeecCCCCceeecCCcceE--ECCeEEEEecCCCCCCCceEEEEEcCCceeeEE-cCCCCCCCCCcce
Q 015251 206 SDVQVYTVGSPAWRSKGKLAYQFVRRPSEAL--VKGRLHWVTRPRRYSPVRGIVSFDIADEQFREV-PKPDCGGLNRCNY 282 (410)
Q Consensus 206 ~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i-~lP~~~~~~~~~~ 282 (410)
..+.+|+..++.|+.+..+..... .-.++. -+|.+...+.. .+.|..+|+.+.++... .+.... ....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~~---~~v~ 100 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCGT-----DRNAYVWTLKGRTWKPTLVILRIN---RAAR 100 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEET-----TSCEEEEEEETTEEEEEEECCCCS---SCEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCC-cccEEEEeCCCCEEEEEcC-----CCeEEEEECCCCeeeeeEEeecCC---Ccee
Confidence 578899998887665432211000 000111 13444333332 26789999988775433 322211 1111
Q ss_pred EEEEe-CCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcE
Q 015251 283 HLTVL-SGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEI 361 (410)
Q Consensus 283 ~l~~~-~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 361 (410)
.+.-. +|...++.. ....+.+|-++.. ..|.....+.. ++ ...+.-+.+..++..
T Consensus 101 ~~~~~~~~~~l~~~~-~d~~v~i~d~~~~---~~~~~~~~~~~--~~------------------~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 101 CVRWAPNEKKFAVGS-GSRVISICYFEQE---NDWWVCKHIKK--PI------------------RSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEECTTSSEEEEEE-TTSSEEEEEEETT---TTEEEEEEECT--TC------------------CSCEEEEEECTTSSE
T ss_pred EEEECCCCCEEEEEe-CCCEEEEEEecCC---Ccceeeeeeec--cc------------------CCCeeEEEEcCCCCE
Confidence 22222 455555544 3678999999852 33544333322 10 013445666667776
Q ss_pred EEE-ecCCEEEEEeCC
Q 015251 362 LLE-YKSRVLVSYDPK 376 (410)
Q Consensus 362 l~~-~~~~~l~~yd~~ 376 (410)
++. ..++.+..||..
T Consensus 157 l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 157 LAAGSCDFKCRIFSAY 172 (372)
T ss_dssp EEEEETTSCEEEEECC
T ss_pred EEEEcCCCCEEEEEcc
Confidence 554 456778899954
No 139
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=21.04 E-value=4e+02 Score=22.87 Aligned_cols=32 Identities=16% Similarity=0.019 Sum_probs=22.5
Q ss_pred eEEEEEccCCcEEEE-ecCCEEEEEeCCCCcEE
Q 015251 350 VRVVCILEKGEILLE-YKSRVLVSYDPKRRTFN 381 (410)
Q Consensus 350 ~~~~~~~~~g~il~~-~~~~~l~~yd~~~~~~~ 381 (410)
+.-+++..+|.+++. ..++.+..||.++++..
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 445667777766654 45678999999987653
No 140
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=20.92 E-value=3.6e+02 Score=22.40 Aligned_cols=197 Identities=9% Similarity=0.039 Sum_probs=97.8
Q ss_pred EEEeccCceEEEeeccCCceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccc
Q 015251 121 DAVGSCNGLLCLSDSLFNDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRR 200 (410)
Q Consensus 121 ~~~~s~~Gll~l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 200 (410)
.+....+|-|.+... ....+.++||. ++...++.+.. .....++..|+.. . +... . ..
T Consensus 24 ~i~~d~~g~l~v~~~-~~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g-~--l~v~-~-~~------------ 81 (300)
T 2qc5_A 24 GITSSEDGKVWFTQH-KANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLG-D--IWFT-E-NG------------ 81 (300)
T ss_dssp EEEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTS-C--EEEE-E-TT------------
T ss_pred eeeECCCCCEEEEcC-CCCeEEEECCC-CceEEEECCCC---CCcceeEEECCCC-C--EEEE-e-cC------------
Confidence 344445676666542 24678899998 76665443221 1244566777543 2 2221 1 10
Q ss_pred cccCCceEEEEEeCCCceeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCceeeEEcCCCCCCCC
Q 015251 201 VIYPRSDVQVYTVGSPAWRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQFREVPKPDCGGLN 278 (410)
Q Consensus 201 ~~~~~~~~~Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~~~~i~lP~~~~~~ 278 (410)
...+.+|+.. +.++........ ....++.+ +|.+|+.... ...|..||.. .++..+.+|....
T Consensus 82 ----~~~v~~~d~~-g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~~~~-- 146 (300)
T 2qc5_A 82 ----ANKIGKLSKK-GGFTEYPLPQPD--SGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYDLPNKGS-- 146 (300)
T ss_dssp ----TTEEEEECTT-SCEEEEECSSTT--CCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTC--
T ss_pred ----CCeEEEECCC-CCeEEecCCCCC--CCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEccCCCCCC--
Confidence 1356667666 555533211000 01112333 5777766543 3689999998 6666666653111
Q ss_pred CcceEEEE-eCCeEEEEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEcc
Q 015251 279 RCNYHLTV-LSGCLSVAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILE 357 (410)
Q Consensus 279 ~~~~~l~~-~~G~L~~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (410)
....+.. -+|+|++.... ... |++++.. ..... +.. +.. .....-+++..
T Consensus 147 -~~~~i~~d~~g~l~v~~~~-~~~--i~~~~~~---g~~~~---~~~--~~~-----------------~~~~~~i~~d~ 197 (300)
T 2qc5_A 147 -YPAFITLGSDNALWFTENQ-NNS--IGRITNT---GKLEE---YPL--PTN-----------------AAAPVGITSGN 197 (300)
T ss_dssp -CEEEEEECTTSSEEEEETT-TTE--EEEECTT---CCEEE---EEC--SST-----------------TCCEEEEEECT
T ss_pred -CceeEEECCCCCEEEEecC-CCe--EEEECCC---CcEEE---eeC--CCC-----------------CCCcceEEECC
Confidence 1223333 35776655432 223 4444431 22222 111 110 01223345566
Q ss_pred CCcEEEEec-CCEEEEEeCCCCcEEEEE
Q 015251 358 KGEILLEYK-SRVLVSYDPKRRTFNEFV 384 (410)
Q Consensus 358 ~g~il~~~~-~~~l~~yd~~~~~~~~v~ 384 (410)
+|.+++... ...+..||+ ++++..+.
T Consensus 198 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 198 DGALWFVEIMGNKIGRITT-TGEISEYD 224 (300)
T ss_dssp TSSEEEEETTTTEEEEECT-TCCEEEEE
T ss_pred CCCEEEEccCCCEEEEEcC-CCcEEEEE
Confidence 788877654 457899998 56666554
No 141
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=20.63 E-value=4.2e+02 Score=23.06 Aligned_cols=181 Identities=11% Similarity=0.122 Sum_probs=82.4
Q ss_pred CceEEEEcccccceeeCCCCCCCCCCceEEEEEEeCCCCCeEEEEEEEEecCCCCCccccccccccCCceEEEEEeCCCc
Q 015251 138 NDAICIYNPFTRDYIELPKSMQYPDQEVVFGFGFHPVSKEYKVIKIVYYRKSCSNSSFQRTRRVIYPRSDVQVYTVGSPA 217 (410)
Q Consensus 138 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vyss~t~~ 217 (410)
.+.+.|||..++++.......... ...+..+.+.|.. .+ ++.. . . ...+.+++..++.
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~g-~~-l~s~-s--~----------------D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWSPCG-NY-LASA-S--F----------------DATTCIWKKNQDD 94 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSSC-SSCEEEEEECTTS-SE-EEEE-E--T----------------TSCEEEEEECCC-
T ss_pred CCeEEEEEcCCCcceeeeeecccc-CCcEEEEEECCCC-CE-EEEE-E--C----------------CCcEEEEEccCCC
Confidence 456778887776543211111111 1345667777743 33 2221 1 1 1467788887776
Q ss_pred eeecCCCCceeecCCcceEE--CCeEEEEecCCCCCCCceEEEEEcCCce-eeEEc-CCCCCCCCCcceEEEE-eCCeEE
Q 015251 218 WRSKGKLAYQFVRRPSEALV--KGRLHWVTRPRRYSPVRGIVSFDIADEQ-FREVP-KPDCGGLNRCNYHLTV-LSGCLS 292 (410)
Q Consensus 218 Wr~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~Il~fDl~~e~-~~~i~-lP~~~~~~~~~~~l~~-~~G~L~ 292 (410)
+..+..+.... ..-.++.+ +|.+...+.. .+.|..+|+.++. ...+. +.... .....+.- -+|.+.
T Consensus 95 ~~~~~~~~~h~-~~v~~v~~sp~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 95 FECVTTLEGHE-NEVKSVAWAPSGNLLATCSR-----DKSVWVWEVDEEDEYECVSVLNSHT---QDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEEEECCCS-SCEEEEEECTTSSEEEEEET-----TSCEEEEEECTTSCEEEEEEECCCC---SCEEEEEECSSSSCE
T ss_pred eEEEEEccCCC-CCceEEEEeCCCCEEEEEEC-----CCeEEEEECCCCCCeEEEEEecCcC---CCeEEEEECCCCCEE
Confidence 65432111000 00001111 3443333322 2578888886542 32221 11111 01112222 245555
Q ss_pred EEEeCCCCeEEEEEEeeCCCCCceeeEEEeccCcCcccccccCCcchhhcccCCCceeEEEEEccCCcEEEE-ecCCEEE
Q 015251 293 VAVYGNYGKLEIWVMKDYNVKESWAKELNIGAYIPKGLKQSLDRPLKIWKNSLNGRVVRVVCILEKGEILLE-YKSRVLV 371 (410)
Q Consensus 293 ~~~~~~~~~l~IW~l~~~~~~~~W~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~~~~l~ 371 (410)
+... .+..+.||-++. ..|.....+... ...+.-+++..+|..|+. ..++.+.
T Consensus 166 ~s~s-~d~~i~~w~~~~----~~~~~~~~~~~h---------------------~~~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 166 ASAS-YDDTVKLYREEE----DDWVCCATLEGH---------------------ESTVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp EEEE-TTSCEEEEEEET----TEEEEEEEECCC---------------------SSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEe-CCCcEEEEEecC----CCEEEEEEecCC---------------------CCceEEEEECCCCCEEEEEeCCCeEE
Confidence 5444 367899998764 346655544321 012444556666665554 3445566
Q ss_pred EEeC
Q 015251 372 SYDP 375 (410)
Q Consensus 372 ~yd~ 375 (410)
.||.
T Consensus 220 iW~~ 223 (345)
T 3fm0_A 220 IWRQ 223 (345)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 6663
Done!