Query 015252
Match_columns 410
No_of_seqs 140 out of 295
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 09:21:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015252.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015252hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1seta1 a.2.7.1 (A:1-110) Sery 52.5 30 0.0022 25.9 8.2 57 259-316 41-97 (110)
2 d1uzka2 g.3.11.1 (A:1605-1647) 32.9 2.3 0.00017 27.4 -1.4 20 381-400 12-31 (43)
3 d1uzka1 g.3.11.1 (A:1486-1528) 32.2 3.2 0.00023 26.6 -0.8 18 382-399 12-29 (43)
4 d1ez3a_ a.47.2.1 (A:) Syntaxin 32.1 93 0.0068 23.2 8.3 30 286-315 48-77 (124)
5 d1emoa1 g.3.11.1 (A:2124-2166) 29.9 4.5 0.00033 26.0 -0.3 18 382-399 14-31 (43)
6 d1apqa_ g.3.11.1 (A:) Compleme 28.4 4 0.00029 27.2 -0.8 15 386-400 25-39 (53)
7 d1lmja1 g.3.11.1 (A:3-46) Fibr 27.3 3.9 0.00028 26.6 -1.0 21 380-400 11-31 (44)
8 d1lmja2 g.3.11.1 (A:47-88) Fib 26.9 3.8 0.00028 26.2 -1.1 21 380-400 10-30 (42)
9 d1szba2 g.3.11.1 (A:124-168) M 22.2 4.8 0.00035 26.0 -1.4 15 386-400 17-31 (45)
10 d1lvfa_ a.47.2.1 (A:) Syntaxin 22.0 87 0.0064 23.1 6.1 27 288-314 40-66 (106)
11 d1dx5i3 g.3.11.1 (I:423-462) T 21.5 5.1 0.00037 25.5 -1.3 21 380-401 9-29 (40)
12 d1emoa2 g.3.11.1 (A:2167-2205) 20.0 7.6 0.00055 24.1 -0.6 22 378-399 6-27 (39)
No 1
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=52.52 E-value=30 Score=25.86 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 015252 259 LNELEAVDGSVKKLYEVIQNEVDTVEEELLQKSVLDLGKRADNLSQGLDHLTKAVDGF 316 (410)
Q Consensus 259 l~Ele~Vdaav~~L~~~i~~~~~~e~~e~v~~~veeL~~~le~Le~gle~Le~~Vd~l 316 (410)
..+++++.+--..+...|... ..++.+++...+.+|+..+..++..+..++.+++.+
T Consensus 41 ~~~~e~l~~~rN~~sk~i~k~-~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~ 97 (110)
T d1seta1 41 KKRLQEVQTERNQVAKRVPKA-PPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (110)
T ss_dssp HHHHHHHHHHHHHHHHHGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554444444444322 233344566666777777766666666666666554
No 2
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.90 E-value=2.3 Score=27.42 Aligned_cols=20 Identities=35% Similarity=0.981 Sum_probs=15.1
Q ss_pred Ccceehhhhhhhhhhhhccc
Q 015252 381 ACYGVHCVNLLGFLRCSCLC 400 (410)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~ 400 (410)
.|..-.|+|..|..+|+|.=
T Consensus 12 ~c~~~~C~Nt~Gsy~C~C~~ 31 (43)
T d1uzka2 12 LCQGGKCINTFGSFQCRCPT 31 (43)
T ss_dssp GGBTSEEEECSSCEEEECCT
T ss_pred CcCCCEEECCCCCeEeECCC
Confidence 34333699999999998853
No 3
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.22 E-value=3.2 Score=26.63 Aligned_cols=18 Identities=39% Similarity=0.866 Sum_probs=14.4
Q ss_pred cceehhhhhhhhhhhhcc
Q 015252 382 CYGVHCVNLLGFLRCSCL 399 (410)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~ 399 (410)
|-.-.|+|..|..+|+|.
T Consensus 12 ~c~~~C~Nt~G~y~C~C~ 29 (43)
T d1uzka1 12 CISGNCVNTPGSYICDCP 29 (43)
T ss_dssp SBTSEEEEETTEEEEECC
T ss_pred CcCCEeECCCCCEEEecC
Confidence 333479999999999985
No 4
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=32.12 E-value=93 Score=23.16 Aligned_cols=30 Identities=20% Similarity=0.390 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHhH
Q 015252 286 ELLQKSVLDLGKRADNLSQGLDHLTKAVDG 315 (410)
Q Consensus 286 e~v~~~veeL~~~le~Le~gle~Le~~Vd~ 315 (410)
..+...+.++++....+...|+.|+..++.
T Consensus 48 ~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~ 77 (124)
T d1ez3a_ 48 EELEELMSDIKKTANKVRSKLKSIEQSIEQ 77 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446667777777777777777777776543
No 5
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.87 E-value=4.5 Score=25.97 Aligned_cols=18 Identities=39% Similarity=0.896 Sum_probs=14.9
Q ss_pred cceehhhhhhhhhhhhcc
Q 015252 382 CYGVHCVNLLGFLRCSCL 399 (410)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~ 399 (410)
|..-+|+|..|..+|.|.
T Consensus 14 ~~~~~C~Nt~Gsy~C~C~ 31 (43)
T d1emoa1 14 CKHGQCINTDGSYRCECP 31 (43)
T ss_dssp CSSSCCCCCSSCCCCCCC
T ss_pred CCCCEeECCCCCeEeECC
Confidence 345679999999999885
No 6
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.40 E-value=4 Score=27.25 Aligned_cols=15 Identities=40% Similarity=0.695 Sum_probs=13.0
Q ss_pred hhhhhhhhhhhhccc
Q 015252 386 HCVNLLGFLRCSCLC 400 (410)
Q Consensus 386 ~~~~~~~~~~~~~~~ 400 (410)
.|+|..|..+|+|.=
T Consensus 25 ~C~Nt~GsY~C~C~~ 39 (53)
T d1apqa_ 25 LCHNYVGGYFCSCRP 39 (53)
T ss_dssp EEEEETTEEEEECST
T ss_pred EeEcCCCCeEeECCC
Confidence 399999999999863
No 7
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.33 E-value=3.9 Score=26.57 Aligned_cols=21 Identities=33% Similarity=0.607 Sum_probs=16.1
Q ss_pred CCcceehhhhhhhhhhhhccc
Q 015252 380 PACYGVHCVNLLGFLRCSCLC 400 (410)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~ 400 (410)
+.|..-.|+|..|..+|.|.=
T Consensus 11 ~~C~~~~C~Nt~Gsy~C~C~~ 31 (44)
T d1lmja1 11 DLCGRGQCVNTPGDFECKCDE 31 (44)
T ss_dssp STTTTSCEEEETTEEEECCCS
T ss_pred CCCCCCEeEcCCCCeEEeCCC
Confidence 345544699999999998753
No 8
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.93 E-value=3.8 Score=26.15 Aligned_cols=21 Identities=38% Similarity=0.683 Sum_probs=16.1
Q ss_pred CCcceehhhhhhhhhhhhccc
Q 015252 380 PACYGVHCVNLLGFLRCSCLC 400 (410)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~ 400 (410)
..|..-.|+|..|..+|+|.=
T Consensus 10 ~~C~~~~C~Nt~Gsy~C~C~~ 30 (42)
T d1lmja2 10 LLCRGGVCHNTEGSYRCECPP 30 (42)
T ss_dssp STTTTSEEEEETTEEEEESCT
T ss_pred CCCCCCEeECCCCCeEEeCCC
Confidence 345544799999999998753
No 9
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.21 E-value=4.8 Score=26.01 Aligned_cols=15 Identities=53% Similarity=1.032 Sum_probs=13.0
Q ss_pred hhhhhhhhhhhhccc
Q 015252 386 HCVNLLGFLRCSCLC 400 (410)
Q Consensus 386 ~~~~~~~~~~~~~~~ 400 (410)
.|+|..|..+|+|.=
T Consensus 17 ~C~Nt~Gsy~C~C~~ 31 (45)
T d1szba2 17 HCHNHLGGFYCSCRA 31 (45)
T ss_dssp EEEEETTEEEEECCT
T ss_pred CCccCCCCeEEECCC
Confidence 599999999998853
No 10
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.05 E-value=87 Score=23.11 Aligned_cols=27 Identities=11% Similarity=0.271 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHh
Q 015252 288 LQKSVLDLGKRADNLSQGLDHLTKAVD 314 (410)
Q Consensus 288 v~~~veeL~~~le~Le~gle~Le~~Vd 314 (410)
+...-.+|+..|+.++.-|++|++-|.
T Consensus 40 ~~~~~~eL~~~l~siewdL~dLe~av~ 66 (106)
T d1lvfa_ 40 IDWTTNELRNNLRSIEWDLEDLDETIS 66 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 556677888888877877787777776
No 11
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.46 E-value=5.1 Score=25.51 Aligned_cols=21 Identities=38% Similarity=0.722 Sum_probs=16.4
Q ss_pred CCcceehhhhhhhhhhhhcccc
Q 015252 380 PACYGVHCVNLLGFLRCSCLCR 401 (410)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~ 401 (410)
..|+. -|+|..|..+|+|.=.
T Consensus 9 ~~C~~-~C~N~~Gsy~C~C~~G 29 (40)
T d1dx5i3 9 GFCSG-VCHNLPGTFECICGPD 29 (40)
T ss_dssp SSCSS-EEEECSSSEEEEECSS
T ss_pred cCccC-EeeCCCCCeEeECCCC
Confidence 34764 5999999999998643
No 12
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.02 E-value=7.6 Score=24.14 Aligned_cols=22 Identities=27% Similarity=0.751 Sum_probs=18.0
Q ss_pred cCCCcceehhhhhhhhhhhhcc
Q 015252 378 LSPACYGVHCVNLLGFLRCSCL 399 (410)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~ 399 (410)
+...|-.-.|.|+.|...|.|.
T Consensus 6 ignpCGnGTCtNviGgFec~C~ 27 (39)
T d1emoa2 6 VGNPCGNGTCKNVIGGFECTCE 27 (39)
T ss_dssp TTCSSSSSCEEECSSSEEECCS
T ss_pred cCCccCCceeeecccceEEeec
Confidence 3456777889999999999885
Done!