BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015253
         (410 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/379 (83%), Positives = 341/379 (89%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+YRL SI+ELPSHLI EIL +GRLSA DL  LELTSKTFGGSHGLYP KF+SLVD A
Sbjct: 1   MADKYRLVSIDELPSHLILEILMTGRLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA HS+Y GM  N Q ELL+RC GNWKRVLRFL +VE SS +VETSAGNMQITTGR
Sbjct: 61  AFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGSSLCGVLGHGPETTQCVSF+RI FPS A VVQVSAS NHAA++L+
Sbjct: 121 YHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILE 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH+DT+RPIFRPR VEALKGVPCKQV AGLNFT FLT  GHV++C
Sbjct: 181 SGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDTLDRPTPK I   E +GSV QIAAGPSY+LAVT +GVVYSFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+E  PRAIQTFRRK +HVVRVSAGDEHVVALDSSG+VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
           IDKTLPEPL+SLKSHLAVQ
Sbjct: 361 IDKTLPEPLNSLKSHLAVQ 379



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 86/213 (40%), Gaps = 21/213 (9%)

Query: 115 QITTGRYHTLLISNSSV---FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAH 164
           QI  G  + L +++S V   F  GS+ C  LGHG       P   Q  +F R N     H
Sbjct: 273 QIAAGPSYVLAVTDSGVVYSFGSGSNFC--LGHGEQHNEFHPRAIQ--TFRRKNL----H 324

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+VSA + H   +  SG V+T G       GH D       P  + +LK     QV A 
Sbjct: 325 VVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTL-PEPLNSLKSHLAVQVCAR 383

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  L   G V   G    G LG  D    D+     I        V QI+ G  + +
Sbjct: 384 KRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTV 443

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           AVT  G V+ FG      LGH      L+P  I
Sbjct: 444 AVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEI 476



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 10/166 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           +V  SAG+  +        L S+  V++ G   CG LGHG E  + +    +N   +   
Sbjct: 325 VVRVSAGDEHVVA------LDSSGFVYTWGKGYCGALGHGDEIDKTLP-EPLNSLKSHLA 377

Query: 166 VQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           VQV A +     ++  G VF  G     S     R  +  + RPR++++L+     Q++ 
Sbjct: 378 VQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQIST 437

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           GL  T  +T +G V   G N   QLGH DTL      +   L+E G
Sbjct: 438 GLYHTVAVTSQGQVFGFGDNERAQLGH-DTLRGCLEPTEIFLQEFG 482


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 308/379 (81%), Positives = 334/379 (88%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+ R  SIE+LPSHLIFEILT+GRLSAVDLA LELTS+TFGGSHGLYPQKFRSLVD A
Sbjct: 1   MADKNRSVSIEDLPSHLIFEILTTGRLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H +Y+GM  N Q  L  RC GNWKRVLRFLQ+VE SS +V+TSA NMQ+TTGR
Sbjct: 61  AYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+V+QVSAS NHAAFVLQ
Sbjct: 121 YHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DTNRPIFRPRLVEALKGVPCKQV  GLNFT FLT +G ++TC
Sbjct: 181 SGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I  LE VGSVVQIAAGPSY+LAVT NGVVYSFGSGSN C
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDE +PRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCGALGHGDE
Sbjct: 301 LGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
           IDKTLP  ++ LKSHLAVQ
Sbjct: 361 IDKTLPALVNCLKSHLAVQ 379



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 10/249 (4%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  +   L     +++CG++  G LGHG    +              VVQ++A  +
Sbjct: 220 QVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPS 279

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +   V  +G V++ G  S+ C GH + +   FRPR ++    K +    V+AG      L
Sbjct: 280 YVLAVTDNGVVYSFGSGSNLCLGHGEQHDE-FRPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V++ G    G LGHGD +D+  P  +  L+     VQ+ A       +   G VY
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKS-HLAVQVCARKRKTFVLVDGGSVY 397

Query: 292 SFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            FG      LG    G     ++PR + + R +  HV ++S G  H V + + G ++ +G
Sbjct: 398 GFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRAR--HVSQISTGLYHTVVVTNQGQMFGFG 455

Query: 349 KGYCGALGH 357
                 LGH
Sbjct: 456 DNERAQLGH 464



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 92/223 (41%), Gaps = 21/223 (9%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSV---FSCGSSLCGVLGHG-------PETTQCVSF 154
           +++E     +QI  G  + L ++++ V   F  GS+LC  LGHG       P   Q  +F
Sbjct: 263 ELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLC--LGHGEQHDEFRPRAIQ--TF 318

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
            R +     HVV VSA + HA  +  SG V++ G       GH D       P LV  LK
Sbjct: 319 RRKDI----HVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTL-PALVNCLK 373

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVV 272
                QV A    T  L   G V+  G    G LG  D    D+     +        V 
Sbjct: 374 SHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVS 433

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           QI+ G  + + VT  G ++ FG      LGH      LQP  I
Sbjct: 434 QISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 314/398 (78%), Positives = 341/398 (85%), Gaps = 3/398 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGNMQITTGR
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+Q
Sbjct: 121 YHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+TC
Sbjct: 181 SGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRS 398
           IDKT PE LSSLKSHLAVQ   V A    T V  DT S
Sbjct: 361 IDKTTPEILSSLKSHLAVQ---VCARKRKTFVLVDTGS 395



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I+ G  H + + +S  V++ G   CG LGHG E  +       +  S    VQV A +
Sbjct: 326 VRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHL-AVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ +G V+  G     S     R  +  + RP ++++L+G    Q++ GL  T  
Sbjct: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVA 444

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +  +G +   G N   QLGH      P P  I
Sbjct: 445 VXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 314/398 (78%), Positives = 341/398 (85%), Gaps = 3/398 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGNMQITTGR
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+Q
Sbjct: 121 YHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+TC
Sbjct: 181 SGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRS 398
           IDKT PE LSSLKSHLAVQ   V A    T V  DT S
Sbjct: 361 IDKTTPEILSSLKSHLAVQ---VCARKRKTFVLVDTGS 395



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I+ G  H + + +S  V++ G   CG LGHG E  +       +  S    VQV A +
Sbjct: 326 VRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHL-AVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ +G V+  G     S     R  +  + RP ++++L+G    Q++ GL  T  
Sbjct: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVA 444

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +  +G +   G N   QLGH      P P  I
Sbjct: 445 VNNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 306/379 (80%), Positives = 331/379 (87%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RYRL SIE+ PSHLIFEILT GRLSA DL  LELTS+TFG SHGLYPQKFRSLVD A
Sbjct: 1   MANRYRLASIEDFPSHLIFEILTIGRLSAADLVCLELTSRTFGASHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H +Y GM  N Q EL +RC GNWKRVLRFLQ+VE SS +V+TSA NMQ+TTGR
Sbjct: 61  AHQLCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSACNMQVTTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+VVQVSAS NHAAFVLQ
Sbjct: 121 YHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHNHAAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH+DTNRPIFRPRLVEALK V CKQV+ GLNFT FLT +G ++TC
Sbjct: 181 SGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRPTPK I  LE +G VVQIAAGPSY+LAVT NGVVYSFG GSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDE QPRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCGALGHGDE
Sbjct: 301 LGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
           IDKTLP  ++ LKS LAVQ
Sbjct: 361 IDKTLPSLVNCLKSRLAVQ 379



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 93/224 (41%), Gaps = 23/224 (10%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSV---FSCGSSLCGVLGHG-------PETTQCVSF 154
           +++E     +QI  G  + L ++++ V   F  GS+ C  LGHG       P   Q  +F
Sbjct: 263 ELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFC--LGHGEQHDEFQPRAIQ--TF 318

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
            R +     HVV VSA + HA  +  SG V++ G       GH D       P LV  LK
Sbjct: 319 RRKDI----HVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTL-PSLVNCLK 373

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD---TLDRPTPKSIAPLEEVGSV 271
                Q  A    T  L   G V+  G    G LG  D   T    TP+ +  L     V
Sbjct: 374 SRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLR-AHRV 432

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            QI+ G  + + VT  G ++ FG      LGH      LQP  I
Sbjct: 433 SQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEI 476


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 300/379 (79%), Positives = 328/379 (86%), Gaps = 3/379 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GNMQITTG+
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCGALGHGDE
Sbjct: 298 LGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDE 357

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
           I+KT PE L+SLK+ L VQ
Sbjct: 358 IEKTTPELLTSLKNQLVVQ 376



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 127/249 (51%), Gaps = 13/249 (5%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++    V++CG++  G LGHG +T    +   I   S+  VVQ++A  +
Sbjct: 220 QVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHG-DTQDRPTPKMIEVLSS--VVQIAAGPS 276

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +   V ++G V++ G  ++FC GH + +  + +PR ++    KG+   +V+AG      L
Sbjct: 277 YILSVTENGTVYSFGSGANFCLGHGEQHDEL-QPRAIQKFRRKGIHIVRVSAGDEHAVAL 335

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G+V+T G    G LGHGD +++ TP+ +  L+    VVQ+ A       +  +G VY
Sbjct: 336 DSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKN-QLVVQVCARKRKTFVLVDSGSVY 394

Query: 292 SFGSGSNFCLGHGEQH---DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            FGS     LG  ++      L+PR + T R    HV ++S G  H V + S G ++ +G
Sbjct: 395 GFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTH--HVSQISTGLYHTVVITSRGQIFGFG 452

Query: 349 KGYCGALGH 357
                 LGH
Sbjct: 453 DNERAQLGH 461



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 9/216 (4%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA- 163
           ++E  +  +QI  G  + L ++ N +V+S GS     LGHG +  +        F     
Sbjct: 261 MIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGI 320

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H+V+VSA + HA  +  +G V+T G       GH D       P L+ +LK     QV A
Sbjct: 321 HIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKT-TPELLTSLKNQLVVQVCA 379

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPS 279
               T  L   G V+  GS   G LG  D   R + K + P  L+ + +  V QI+ G  
Sbjct: 380 RKRKTFVLVDSGSVYGFGSMGFGSLGFLDR--RVSDKVLKPRILDTLRTHHVSQISTGLY 437

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           + + +T  G ++ FG      LGH      L+P  I
Sbjct: 438 HTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEI 473



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 13/167 (7%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           IV  SAG+       +   L SN  V++ G   CG LGHG E  +       +  +   V
Sbjct: 322 IVRVSAGD------EHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQL-V 374

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTA 223
           VQV A +     ++ SG V+  G       G   R  +  + +PR+++ L+     Q++ 
Sbjct: 375 VQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQIST 434

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD---RPTPKSIAPLEE 267
           GL  T  +T RG +   G N   QLGH DTL     PT   I  + E
Sbjct: 435 GLYHTVVITSRGQIFGFGDNERAQLGH-DTLRSCLEPTEIFIKDVSE 480


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  612 bits (1579), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 299/379 (78%), Positives = 328/379 (86%), Gaps = 3/379 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GNMQITTG+
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIF+PRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCGALGHGDE
Sbjct: 298 LGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDE 357

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
           I+KT PE L+SLK+ L VQ
Sbjct: 358 IEKTTPELLTSLKNQLVVQ 376



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 133/260 (51%), Gaps = 15/260 (5%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++    V++CG++  G LGHG +T    +   I   S+  VVQ++A  +
Sbjct: 220 QVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHG-DTQDRPTPKMIEVLSS--VVQIAAGPS 276

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +   V ++G V++ G  ++FC GH + +  + +PR ++    KG+   +V+AG      L
Sbjct: 277 YILSVTENGTVYSFGSGANFCLGHGEQHDEL-QPRAIQKFRRKGIHIVRVSAGDEHAVAL 335

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G+V+T G    G LGHGD +++ TP+ +  L+    VVQ+ A       +  +G VY
Sbjct: 336 DSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKN-QLVVQVCARKRKTFVLVDSGSVY 394

Query: 292 SFGSGSNFCLGHGEQH---DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            FGS     LG  ++      L+PR + T R    HV ++S G  H V + S G ++ +G
Sbjct: 395 GFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTH--HVSQISTGLYHTVVITSRGQIFGFG 452

Query: 349 KGYCGALGHGDEIDKTLPEP 368
                 LGH  +I ++  EP
Sbjct: 453 DNERAQLGH--DILRSCLEP 470



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 9/216 (4%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAA 163
           ++E  +  +QI  G  + L ++ N +V+S GS     LGHG +  +        F     
Sbjct: 261 MIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGI 320

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H+V+VSA + HA  +  +G V+T G       GH D       P L+ +LK     QV A
Sbjct: 321 HIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKT-TPELLTSLKNQLVVQVCA 379

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPS 279
               T  L   G V+  GS   G LG  D   R + K + P  L+ + +  V QI+ G  
Sbjct: 380 RKRKTFVLVDSGSVYGFGSMGFGSLGFLDR--RVSGKVLKPRILDTLRTHHVSQISTGLY 437

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           + + +T  G ++ FG      LGH      L+P  I
Sbjct: 438 HTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEI 473


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 298/379 (78%), Positives = 326/379 (86%), Gaps = 3/379 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M DR R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLVD A
Sbjct: 1   MGDRCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  +A M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS GNMQITTG+
Sbjct: 61  AFQLCASHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+ P    VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDELQPR IQ FRRKGIH+VRVSAGDEH VALDS+G+VYTWGKGYCGALGHGDE
Sbjct: 298 LGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDE 357

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
           I+KT PE L+SLK+ LAVQ
Sbjct: 358 IEKTTPELLTSLKNQLAVQ 376



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 13/249 (5%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++    V++CG++  G LGHG +T    +   I   S+  VVQ++A  +
Sbjct: 220 QVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHG-DTQDRPTPKMIEVLSS--VVQIAAGPS 276

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +   V ++G V++ G  ++FC GH + +  + +PR ++    KG+   +V+AG      L
Sbjct: 277 YILSVTENGTVYSFGSGANFCLGHGEQHDEL-QPRPIQKFRRKGIHIVRVSAGDEHAVAL 335

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V+T G    G LGHGD +++ TP+ +  L+     VQ+ A       +  +G VY
Sbjct: 336 DSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKN-QLAVQVCARKRKTFVLVNSGSVY 394

Query: 292 SFGSGSNFCLGHGEQH---DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            FGS     LG  ++      L+PR + T R    HV ++S G  H V + S G ++ +G
Sbjct: 395 GFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAH--HVSQISTGLYHTVVITSRGQIFGFG 452

Query: 349 KGYCGALGH 357
                 LGH
Sbjct: 453 DNERAQLGH 461



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 9/216 (4%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA- 163
           ++E  +  +QI  G  + L ++ N +V+S GS     LGHG +  +        F     
Sbjct: 261 MIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGI 320

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H+V+VSA + HA  +  +G V+T G       GH D       P L+ +LK     QV A
Sbjct: 321 HIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKT-TPELLTSLKNQLAVQVCA 379

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPS 279
               T  L   G V+  GS   G LG  D   R + K + P  L+ + +  V QI+ G  
Sbjct: 380 RKRKTFVLVNSGSVYGFGSMGFGSLGFLDR--RVSDKVLKPRILDTLRAHHVSQISTGLY 437

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           + + +T  G ++ FG      LGH      L+P  I
Sbjct: 438 HTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQI 473


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 288/396 (72%), Positives = 323/396 (81%), Gaps = 3/396 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA      +  +LPSHLI E+LTSGRL+A DL  LELT K FGGSH LYP KFRSLVD A
Sbjct: 1   MAKWLHSTTFVDLPSHLILEVLTSGRLNAHDLVCLELTCKLFGGSHELYPLKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  HS Y+GM  + Q +L +RC G WKRV RFLQ VE SS+IVETS GNMQI TGR
Sbjct: 61  AFQLCISHSTYSGMGEDSQRQLFDRCQGKWKRVFRFLQLVEKSSNIVETSEGNMQIATGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISN SV+SCGSSLCGVLGHG ETTQCV+FTRINFP + +V QVSAS NHAAFV Q
Sbjct: 121 YHTLLISNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFVTQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQVFTCGDNSSFCCGHRDT+  IFRPRLVEAL G+PCKQV+ G NF+ FLT +GHV+TC
Sbjct: 181 SGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NT+GQLGHG+TL+ PTPK +  L E+GSV+QIAAGPSY+LAV  +G VYSFGSGSNFC
Sbjct: 241 GTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+E QPR +QTFR K IHVV VSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDT 396
           IDKT+P+PL+SLK+HLAVQ   V A    T V  DT
Sbjct: 361 IDKTIPQPLNSLKNHLAVQ---VCARKRKTFVLVDT 393



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 12/250 (4%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  +   L     V++CG++  G LGHG                   V+Q++A  +
Sbjct: 220 QVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPS 279

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
           +   V+  G+V++ G  S+FC GH + +   F+PR+++   LK +    V+AG      L
Sbjct: 280 YVLAVVNDGRVYSFGSGSNFCLGHGEQHNE-FQPRVLQTFRLKNIHVVSVSAGDEHAVAL 338

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V+T G    G LGHGD +D+  P+ +  L+     VQ+ A       +   G+VY
Sbjct: 339 DSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKN-HLAVQVCARKRKTFVLVDTGIVY 397

Query: 292 SFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTW 347
            FG      LG    G     L+PR++ + R   +H V ++S G  H V +   G ++ +
Sbjct: 398 GFGWMGFGSLGFPDRGVSDKVLRPRSLDSLR---VHRVSQISTGLYHTVVVTEKGKIFGF 454

Query: 348 GKGYCGALGH 357
           G      LGH
Sbjct: 455 GDNERAQLGH 464



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H + L SN  V++ G   CG LGHG E  + +    +N       VQV A +
Sbjct: 326 VSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIP-QPLNSLKNHLAVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ +G V+  G     S     R  +  + RPR +++L+     Q++ GL  T  
Sbjct: 385 RKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVV 444

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T +G +   G N   QLGH
Sbjct: 445 VTEKGKIFGFGDNERAQLGH 464


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/379 (73%), Positives = 312/379 (82%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSG+LSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNWLISFEDLPSHLILEVLTSGKLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+L FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLLSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HGPETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+V TCGDNSS CCGH DT+RPIFRP+LVE LKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDT+DRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            DK  P+ L +LK+ LAVQ
Sbjct: 361 NDKITPQVLVNLKNCLAVQ 379



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 12/260 (4%)

Query: 106 IVETSAGN--MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +VE   G    Q+  G + T+ +S     ++CGS+  G LGHG    +          + 
Sbjct: 209 LVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNI 268

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQ 220
             VVQ++A  ++   V Q G V++ G  S+FC GH +    + +PR+++A K  G+   +
Sbjct: 269 GPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL-QPRVIQAFKRKGIHILR 327

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG      L   G V+T G    G LGHGD  D+ TP+ +  L+     VQ+ A    
Sbjct: 328 VSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNC-LAVQVCARKRK 386

Query: 281 MLAVTGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +   G++Y FG      LG    G     L+PR ++  +     V +VS G  H + 
Sbjct: 387 TFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH--RVSQVSTGLYHTIV 444

Query: 338 LDSSGYVYTWGKGYCGALGH 357
           +   G ++ +G      LGH
Sbjct: 445 VTQGGRIFGFGDNERAQLGH 464



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 5/206 (2%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +QI  G  + L ++ + SV+S GS     LGHG +  +        F     H+++VSA 
Sbjct: 272 VQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAG 331

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + HA  +  +G+V+T G       GH D N  I  P+++  LK     QV A    T  L
Sbjct: 332 DEHAVALDSNGRVYTWGKGYCGALGHGDENDKI-TPQVLVNLKNCLAVQVCARKRKTFVL 390

Query: 232 TIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G ++  G    G LG  D    D+     +    +   V Q++ G  + + VT  G 
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQGGR 450

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAI 315
           ++ FG      LGH      L+P  I
Sbjct: 451 IFGFGDNERAQLGHNSLRGCLEPTEI 476


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 279/379 (73%), Positives = 310/379 (81%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            DK  P+ L +L + LAVQ
Sbjct: 361 NDKITPQVLVNLNNCLAVQ 379



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 10/249 (4%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G + T+ +S     ++CGS+  G LGHG    + V        +   VVQ++A  +
Sbjct: 220 QVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPS 279

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V Q G V++ G  S+FC GH +    + +PR+++A K  G+   +V+AG      L
Sbjct: 280 YVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL-QPRVIQAFKRKGIHILRVSAGDEHAVAL 338

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V+T G    G LGHGD  D+ TP+ +  L      VQ+ A       +   G++Y
Sbjct: 339 DSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNC-LAVQVCARKRKTFVLVEGGLLY 397

Query: 292 SFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            FG      LG    G     L+PR ++  +     V +VS G  H + +   G ++ +G
Sbjct: 398 GFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH--RVSQVSTGLYHTIVVTQRGRIFGFG 455

Query: 349 KGYCGALGH 357
                 LGH
Sbjct: 456 DNERAQLGH 464



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L SN  V++ G   CG LGHG E  +      +N  +    VQV A +
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCL-AVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +++ G ++  G     S     R  +  + RPR++E LK     QV+ GL  T  
Sbjct: 385 RKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIV 444

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG +   G N   QLGH
Sbjct: 445 VTQRGRIFGFGDNERAQLGH 464



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 5/215 (2%)

Query: 105 DIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SA 162
           + ++T    +QI  G  + L ++ + SV+S GS     LGHG +  +        F    
Sbjct: 263 EFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H+++VSA + HA  +  +G+V+T G       GH D N  I  P+++  L      QV 
Sbjct: 323 IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKI-TPQVLVNLNNCLAVQVC 381

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           A    T  L   G ++  G    G LG  D    D+     +    +   V Q++ G  +
Sbjct: 382 ARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYH 441

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            + VT  G ++ FG      LGH      L+P  I
Sbjct: 442 TIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/379 (73%), Positives = 310/379 (81%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LA+T +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            DK  P+ L +L + LAVQ
Sbjct: 361 NDKITPQVLVNLNNCLAVQ 379



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 12/260 (4%)

Query: 106 IVETSAGN--MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +VE   G    Q+  G + T+ +S     ++CGS+  G LGHG    + V        + 
Sbjct: 209 LVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTI 268

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQ 220
             VVQ++A  ++   + Q G V++ G  S+FC GH +    + +PR+++A K  G+   +
Sbjct: 269 GPVVQIAAGPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDEL-QPRVIQAFKRKGIHILR 327

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG      L   G V+T G    G LGHGD  D+ TP+ +  L      VQ+ A    
Sbjct: 328 VSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNC-LAVQVCARKRK 386

Query: 281 MLAVTGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +   G++Y FG      LG    G     L+PR ++  +     V +VS G  H + 
Sbjct: 387 TFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPH--RVSQVSTGLYHTIV 444

Query: 338 LDSSGYVYTWGKGYCGALGH 357
           +   G ++ +G      LGH
Sbjct: 445 VTQRGRIFGFGDNERAQLGH 464



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 13/227 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           +V+ FL+++     +V+ +AG        Y   L  + SV+S GS     LGHG +  + 
Sbjct: 260 KVVEFLKTI---GPVVQIAAGP------SYVLALTQDGSVYSFGSGSNFCLGHGEQQDEL 310

Query: 152 VSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
                  F     H+++VSA + HA  +  +G+V+T G       GH D N  I  P+++
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKI-TPQVL 369

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEV 268
             L      QV A    T  L   G ++  G    G LG  D    D+     +    + 
Sbjct: 370 VNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKP 429

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             V Q++ G  + + VT  G ++ FG      LGH      L+P  I
Sbjct: 430 HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/374 (65%), Positives = 287/374 (76%), Gaps = 11/374 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
              + +A M    + ELL RC G+WK+VLRFLQSVE SSD VETS+GNMQ+ TGRYHTLL
Sbjct: 57  EARTAFAVMGPAARGELLARCGGSWKKVLRFLQSVEQSSDTVETSSGNMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQCV+F+R++FP+ + VV +SA  NHAAFV ++GQVF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVTETGQVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH D  R IFRP  +EALKG  CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR  PK I   E    VVQ+AAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QH+EL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 297 QHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 356

Query: 366 PEPLSSLKSHLAVQ 379
           PE + SLK  +AVQ
Sbjct: 357 PELIGSLKGQVAVQ 370



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 59/273 (21%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG   T++++    V++CGS+  G LGHG    +        F  ++ VVQV+A  +
Sbjct: 211 QVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGAS 270

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V + G  ++FC GH D +  +  PR +++ K   +   +V+AG      L
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHNELL-PRAIQSFKRRNIHVVRVSAGDEHAVAL 329

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------------EVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I  L+                  + GSVV 
Sbjct: 330 DALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVA 389

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 390 FGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNE 449

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
              LG       L+P  I  F +  +  + ++A
Sbjct: 450 RAQLGQEYIRGCLKPTEIM-FHKSSMEDIAIAA 481



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 18/172 (10%)

Query: 81  ELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCG 140
           ELL R   ++KR          +  +V  SAG+       +   L +   V++ G   CG
Sbjct: 300 ELLPRAIQSFKR---------RNIHVVRVSAGD------EHAVALDALGYVYTWGRGYCG 344

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHR 198
            LGHG E  +  S   I        VQV A +     +   G V   G     S     R
Sbjct: 345 ALGHGDENDK-TSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDR 403

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
           +++  + +P ++++L+G    Q++ GL  T  +T +G V   G N   QLG 
Sbjct: 404 ESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQ 455


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/374 (66%), Positives = 289/374 (77%), Gaps = 11/374 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FSIEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WKRVLRFLQSVE SS  VETS+G+MQ+ TGRYHTLL
Sbjct: 57  AARAAFAAMGPAARGELLERCGGSWKRVLRFLQSVEQSSGTVETSSGSMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFV +SG+VF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNHAAFVTESGEVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ G+VYTWG+GYCGALGHGDE DKT 
Sbjct: 297 QHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTS 356

Query: 366 PEPLSSLKSHLAVQ 379
           PE + SLK  +AVQ
Sbjct: 357 PELIGSLKGQVAVQ 370



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 146/346 (42%), Gaps = 41/346 (11%)

Query: 6   RLFSIEELPSHLIF-----EILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           R+ +I    +H  F     E+ T G  S++   H E+    F       P +  +L  + 
Sbjct: 155 RVINISASHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIF------RPMQVEALKGIP 208

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSS----DIVETSAGNMQI 116
             Q+    S    ++R+ Q+     C  N    L    +++ ++    ++ E     +QI
Sbjct: 209 CKQVATGLSFTVILTRDGQV---YTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQI 265

Query: 117 TTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQVSA 170
             G  +T  +++  +V S GS     LGHG +  + +     SF R N     HVV+VSA
Sbjct: 266 AAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNI----HVVRVSA 321

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + HA  +   G V+T G       GH D N     P L+ +LKG    QV A    T  
Sbjct: 322 GDEHAVALDALGHVYTWGRGYCGALGHGDENDKT-SPELIGSLKGQVAVQVCARKRKTFV 380

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT  G V   G    G LG    LDR T      P+ +  L++   V QI+ G  + +AV
Sbjct: 381 LTDEGSVVAFGWMGFGSLGF---LDRGTSDKVMRPRVLESLQD-HYVSQISTGLYHTVAV 436

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           T  G+V+ FG      LG       L+P  I    +K I  + ++A
Sbjct: 437 TNKGIVFGFGDNERAQLGQEYIRGCLKPTEI--MFQKSIEDIPIAA 480


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/374 (65%), Positives = 290/374 (77%), Gaps = 11/374 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 366 PEPLSSLKSHLAVQ 379
           PE +SSLKS +AVQ
Sbjct: 358 PELISSLKSQVAVQ 371



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 58/258 (22%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG  +  +L ++  V++CGS+  G LGHG    +        F   A VVQV+A  +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V++ G  ++FC GH D +  + RPR +++ K   +   +V+AG      L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------------------LEEVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I+                   L + GSV  
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 391 FGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNE 450

Query: 298 NFCLGHGEQHDELQPRAI 315
              LG       L+P  I
Sbjct: 451 RAQLGQEYIRGCLKPTEI 468



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L +   V++ G   CG LGHG E  +  S   I+   +   VQV A +
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELISSLKSQVAVQVCARK 376

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +   G VF  G     S     R ++  + RPR++++L+     Q++ GL  T  
Sbjct: 377 RKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVA 436

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG V   G N   QLG 
Sbjct: 437 VTNRGIVFGFGDNERAQLGQ 456


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/374 (65%), Positives = 290/374 (77%), Gaps = 11/374 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 366 PEPLSSLKSHLAVQ 379
           PE +SSLKS +AVQ
Sbjct: 358 PELISSLKSQVAVQ 371



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 58/258 (22%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG  +  +L ++  V++CGS+  G LGHG    +        F   A VVQV+A  +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V++ G  ++FC GH D +  + RPR +++ K   +   +V+AG      L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------------------LEEVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I+                   L + GSV  
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 391 FGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNE 450

Query: 298 NFCLGHGEQHDELQPRAI 315
              LG       L+P  I
Sbjct: 451 RAQLGQEYIRGCLKPTEI 468



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L +   V++ G   CG LGHG E  +  S   I+   +   VQV A +
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELISSLKSQVAVQVCARK 376

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +   G VF  G     S     R ++  + RPR++++L+     Q++ GL  T  
Sbjct: 377 RKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVA 436

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG V   G N   QLG 
Sbjct: 437 VTNRGIVFGFGDNERAQLGQ 456


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 244/374 (65%), Positives = 289/374 (77%), Gaps = 11/374 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+L 
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLW 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 366 PEPLSSLKSHLAVQ 379
           PE +SSLKS +AVQ
Sbjct: 358 PELISSLKSQVAVQ 371



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 58/258 (22%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG  +  +L ++  V++CGS+  G LGHG    +        F   A VVQV+A  +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V++ G  ++FC GH D +  + RPR +++ K   +   +V+AG      L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------------------LEEVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I+                   L + GSV  
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 391 FGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNE 450

Query: 298 NFCLGHGEQHDELQPRAI 315
              LG       L+P  I
Sbjct: 451 RAQLGQEYIRGCLKPTEI 468



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L +   V++ G   CG LGHG E  +  S   I+   +   VQV A +
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELISSLKSQVAVQVCARK 376

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +   G VF  G     S     R ++  + RPR++++L+     Q++ GL  T  
Sbjct: 377 RKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVA 436

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG V   G N   QLG 
Sbjct: 437 VTNRGIVFGFGDNERAQLGQ 456


>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 371

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/346 (63%), Positives = 262/346 (75%), Gaps = 11/346 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R F IEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFPIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    +  LL RC G+WK+VLRFLQSVE SS  VET++G+MQ+ TGRYHTLL
Sbjct: 57  AARAAFAAMGPAARGGLLERCGGSWKKVLRFLQSVEQSSGTVETTSGSMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFVL+SG+VF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           QHDEL PRAIQ+F+ + IHVVRVSAGDEH VALD+ GYV+  G+ Y
Sbjct: 297 QHDELLPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVWCSGERY 342



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 1/131 (0%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++CGS+  G LGHG    +    S      +  V+ I+A  ++   V  +G V++ G  
Sbjct: 122 VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVFTCGDN 181

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           S+ C GHGE    +  R +Q    KGI   +V+ G    V L   G VYT G    G LG
Sbjct: 182 SSLCCGHGEVGRTIF-RPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLG 240

Query: 357 HGDEIDKTLPE 367
           HGD ID+  P+
Sbjct: 241 HGDTIDRATPK 251


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  303 bits (776), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 163/373 (43%), Positives = 235/373 (63%), Gaps = 4/373 (1%)

Query: 10  IEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHS 69
           IE LP  ++ +IL +GRL  VDLA LE +S  F  + G+ P +F+S+ +LAA   C +H 
Sbjct: 5   IEMLPPCILQDILYNGRLGPVDLASLEASSYMFRAASGIAPYRFKSIAELAAHHSCQMHP 64

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAG-NMQITTGRYHTLLISN 128
           ++       ++ELL RC GNWK VL FL S++ SS +    +G ++ +  GRYHTLL+  
Sbjct: 65  VFENFPPRARLELLARCEGNWKLVLHFLNSLQRSSGLSVGGSGRDVLVAAGRYHTLLVDR 124

Query: 129 S-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFT 186
              +++CG+    VLG  P  +       I  P+AA  +VQ+SA+ NHAAFV +SGQV+T
Sbjct: 125 KGELYACGTG-GSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNHAAFVTESGQVYT 183

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            GDN S CCG  ++ +PI +P LV  L+  PC+QV+ G  +T  LT  G + + G N+HG
Sbjct: 184 FGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWGCNSHG 243

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G+T ++  P+ I    E   V Q++AG  + LAVT +G ++S+G GSN+CLGH + 
Sbjct: 244 QLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTKSGQLFSWGYGSNYCLGHDDF 303

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             EL+P+ ++      + ++  +AGDEH  A+DS GYVYTWGKGYCGALGHG   D+  P
Sbjct: 304 LTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYVYTWGKGYCGALGHGAGTDQRTP 363

Query: 367 EPLSSLKSHLAVQ 379
             +++LKS  AVQ
Sbjct: 364 LVVAALKSTRAVQ 376



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 9/248 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++TG+ +T+ L  N  +FS G +  G LG G    Q        F  +  V QVSA   
Sbjct: 217 QVSTGQGYTVALTRNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGIC 276

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 231
           H   V +SGQ+F+ G  S++C GH D    + RP+ VE      +      AG   +  +
Sbjct: 277 HTLAVTKSGQLFSWGYGSNYCLGHDDFLTEL-RPKRVEHGGFDDLFIISAAAGDEHSAAI 335

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G+V+T G    G LGHG   D+ TP  +A L+     VQ+ A       +  NG V+
Sbjct: 336 DSLGYVYTWGKGYCGALGHGAGTDQRTPLVVAALKST-RAVQVVARRRKTFVLGDNGTVH 394

Query: 292 SFGSGSNFCLG-HGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           SFG  +   LG  G+   +  + P+++      G  V  ++AG  H + +   G ++ +G
Sbjct: 395 SFGWMAYHSLGVQGKSASDTVVSPQSLD-LALHGHKVSTIAAGMYHTLVITRKGAIFGFG 453

Query: 349 KGYCGALG 356
                 LG
Sbjct: 454 DNDSSQLG 461



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGS--NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           V AG   T  +  +G ++ CG+  +  GQ      L RP   SI        +VQI+A  
Sbjct: 112 VAAGRYHTLLVDRKGELYACGTGGSVLGQNPAVSNLQRPA--SIPLPAAATRIVQISANF 169

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++   VT +G VY+FG   + C G GE    + +P  + T  R      +VS G  + VA
Sbjct: 170 NHAAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQ--QVSTGQGYTVA 227

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTI 391
           L  +G +++WG    G LG G+  ++  P  +        V  +S  A +C T+
Sbjct: 228 LTRNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVS--AGICHTL 279


>gi|356510726|ref|XP_003524086.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 291

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 89/102 (87%)

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           PSY+L+   NG VYSFGSG+NFCLGHG+QHDELQP  IQ FRRKGIH+VR+SAGDEH VA
Sbjct: 81  PSYILSAIENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVA 140

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           +DS+G+VYTWGKGYCGALGHGDEID T P+ L+SLK+ L VQ
Sbjct: 141 VDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQLVVQ 182



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 9/184 (4%)

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGH 236
           +++G V++ G  ++FC GH D +  + +P  ++    KG+   +++AG      +   G 
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDEL-QPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGF 146

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+T G    G LGHGD +D  TPK +  L+    VVQ+         +  +G +Y FGS 
Sbjct: 147 VYTWGKGYCGALGHGDEIDNTTPKLLTSLKN-QLVVQVCVRKRKTFVLVNSGSMYGFGSM 205

Query: 297 SNFCLGHGEQH---DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
               LG  ++      L+PR + T R    HV ++S G  H + + S G+++ +G     
Sbjct: 206 GFGSLGFLDRRVSDKVLKPRILDTLRAH--HVSQISTGLYHTMVITSRGHIFGFGDNERA 263

Query: 354 ALGH 357
            LGH
Sbjct: 264 QLGH 267



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 6/149 (4%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSF 293
           G V++ GS  +  LGHGD  D   P  I      G  +V+I+AG  + +AV  NG VY++
Sbjct: 91  GTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFVYTW 150

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LGHG++ D   P+ + + + +   VV+V         L +SG +Y +G    G
Sbjct: 151 GKGYCGALGHGDEIDNTTPKLLTSLKNQ--LVVQVCVRKRKTFVLVNSGSMYGFGSMGFG 208

Query: 354 ALGHGDE--IDKTL-PEPLSSLKSHLAVQ 379
           +LG  D    DK L P  L +L++H   Q
Sbjct: 209 SLGFLDRRVSDKVLKPRILDTLRAHHVSQ 237



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I+ G  H + + SN  V++ G   CG LGHG E          +  +   VVQV   +
Sbjct: 129 VRISAGDEHAVAVDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQL-VVQVCVRK 187

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ SG ++  G       G   R  +  + +PR+++ L+     Q++ GL  T  
Sbjct: 188 RKTFVLVNSGSMYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMV 247

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL 254
           +T RGH+   G N   QLGH DTL
Sbjct: 248 ITSRGHIFGFGDNERAQLGH-DTL 270



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 79/193 (40%), Gaps = 4/193 (2%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQV 184
           I N +V+S GS     LGHG +  +        F     H+V++SA + HA  V  +G V
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFV 147

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +T G       GH D       P+L+ +LK     QV      T  L   G ++  GS  
Sbjct: 148 YTWGKGYCGALGHGDEIDNT-TPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMG 206

Query: 245 HGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            G LG  D    D+     I        V QI+ G  + + +T  G ++ FG      LG
Sbjct: 207 FGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDNERAQLG 266

Query: 303 HGEQHDELQPRAI 315
           H      L+P  I
Sbjct: 267 HDTLTSCLEPTQI 279


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 182/381 (47%), Gaps = 22/381 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 47  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
             I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H++ + 
Sbjct: 106 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHSIAVT 160

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V++ G +  G LGHG  T +      +       ++Q +A       +   G+V+ 
Sbjct: 161 SKGEVYTFGYNNSGQLGHG-HTEEQARIQPVRSLQGIRIIQAAAGAARTMLISDDGKVYA 219

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T     
Sbjct: 220 CGKESFGEAEYGGQGT-QPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 278

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGS 297
            G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G 
Sbjct: 279 DGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGL 334

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G LGH
Sbjct: 335 GGKLGHGSRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 394

Query: 358 GDEIDKTLPEPLSSLKSHLAV 378
           G+E  +++P+ +  L    AV
Sbjct: 395 GNEECESVPKVVEGLNHVKAV 415



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 113/277 (40%), Gaps = 31/277 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G Y T ++S       FS G+   G LGH  E         +       VVQ++A
Sbjct: 253 VQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAA 310

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTA 223
              +  A   Q     V++  CG       G R   +    PR++E  K   +  + V A
Sbjct: 311 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEK---YPRVIEQFKILNLQPRVVAA 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 368 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLNHV-KAVHVATGDYTTFV 426

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH    DE        L P  + + ++    VV++S      
Sbjct: 427 VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPAVVTSLKQANERVVQISLTNSIY 486

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            + H  AL  SG +Y +G G  G LG   E+D+   E
Sbjct: 487 WNAHTFALTESGKLYAFGAGDQGQLGA--ELDRNRKE 521


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 181/381 (47%), Gaps = 22/381 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 46  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 104

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
             I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H++ + 
Sbjct: 105 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHSVAVT 159

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V++ G +  G LGHG  T        +       ++Q +A       +   G+V+ 
Sbjct: 160 SKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYA 218

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T     
Sbjct: 219 CGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 277

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGS 297
            G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G 
Sbjct: 278 DGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGL 333

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G LGH
Sbjct: 334 GGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 393

Query: 358 GDEIDKTLPEPLSSLKSHLAV 378
           G+E  +++P+ +  L    AV
Sbjct: 394 GNEECESVPKVVEGLSHVKAV 414



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 115/280 (41%), Gaps = 32/280 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G Y T ++S       FS G+   G LGH  E         +       VVQ++A
Sbjct: 252 VQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAA 309

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTA 223
              +  A   Q     V++  CG       G R   +    PR++E  +   +  + V A
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEK---YPRVIEQFQILNLQPRVVAA 366

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 367 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHV-KAVHVATGDYTTFV 425

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH    DE        L P  + + ++    +V++S      
Sbjct: 426 VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIY 485

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPE 367
            + H  AL  SG ++ +G G  G LG     ++ ++ +PE
Sbjct: 486 WNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPE 525


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 186/384 (48%), Gaps = 28/384 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M++  +     RC G+WK VLRF+ + E      ++     Q   G  H++ ++
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S +V++ GS+  G LGHG       P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  GHV+
Sbjct: 215 DAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVY 274

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFG 294
           T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        VYS G
Sbjct: 275 TFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSVG 333

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G  G 
Sbjct: 334 CGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGC 393

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAV 378
           LGHG+E  +++P+ + SL +  AV
Sbjct: 394 LGHGNEECESVPKVVESLVNVRAV 417



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 117/301 (38%), Gaps = 36/301 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS G+ +   LGH  E 
Sbjct: 238 RVVTTPQLVESLKDIY-----IVQAAIGNFFTAVLSREGHVYTFSWGNDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      +   G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V   V +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 408 VESLVNV-RAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 466

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLP 366
           + + +R    V ++S       + H  AL  SG +Y +G G  G LG      E ++  P
Sbjct: 467 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTP 526

Query: 367 E 367
           E
Sbjct: 527 E 527


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 184/377 (48%), Gaps = 14/377 (3%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 49  FPLSASPS-IVLHVLTSCNLDPQDLAKLEATCSFFRQPANFAPDFALSLAELAAFDMCMK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H++ + 
Sbjct: 108 RAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +      I       ++Q +A       +  SGQV+ 
Sbjct: 163 SKGDVYSFGSNSSGQLGHG-TTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYA 221

Query: 187 CGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 222 FGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 281

Query: 246 GQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFCL 301
           G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   +G+ VYS G G    L
Sbjct: 282 GKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 340

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F+   +  + +SAG  H   +   G V TWG G  G LGHG+E 
Sbjct: 341 GHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 400

Query: 362 DKTLPEPLSSLKSHLAV 378
            +  P+ + +L +  AV
Sbjct: 401 CEAAPKVVDALTNVKAV 417



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 109/264 (41%), Gaps = 25/264 (9%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  ++        +       VVQ++A
Sbjct: 255 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHHTDSNDMEPHPLLGALEDIPVVQIAA 312

Query: 171 SENHA---AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTAGL 225
              +    A       V++ G       GH       F PRL+E  + +  +   ++AG 
Sbjct: 313 GYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKF-PRLIEQFQTLNLQPMVISAGA 371

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                +   G V T G   +G LGHG+      PK +  L  V   V +A G      V 
Sbjct: 372 WHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNV-KAVHVATGDYTTFVVA 430

Query: 286 GNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA-----GD 332
            +G VYSFG G +  LGH       G +H + L P  + + ++    VV++S       +
Sbjct: 431 EDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWN 490

Query: 333 EHVVALDSSGYVYTWGKGYCGALG 356
            H  AL  SG +Y +G G  G LG
Sbjct: 491 AHTFALTESGKLYAFGAGDKGQLG 514


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 184/388 (47%), Gaps = 36/388 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVE-----HSSDIVETSAGNMQITTGRYH 122
            +I+  M++  +     RC G+WK VLRF+ + E       S  +     ++ +TTG   
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTG--- 164

Query: 123 TLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHA 175
                  +V++ GS+  G LGHG       P   + +   RI        +Q +A     
Sbjct: 165 ------GAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRT 210

Query: 176 AFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  
Sbjct: 211 MLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSRE 270

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVV 290
           GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        V
Sbjct: 271 GHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSV 329

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G
Sbjct: 330 YSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWG 389

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LGHG+E  +++P+ + SL +  A+
Sbjct: 390 RYGCLGHGNEECESVPKVVESLVNVRAI 417



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 112/287 (39%), Gaps = 33/287 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS G+ +   LGH  E 
Sbjct: 238 RVVTTPQLVESLKDIY-----IVQAAIGNFFTAVLSREGHVYTFSWGNDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      +   G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V   + +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 408 VESLVNV-RAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 466

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALG 356
           + + +R    V ++S       + H  AL  SG +Y +G G  G LG
Sbjct: 467 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLG 513


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 185/378 (48%), Gaps = 16/378 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F + + PS ++  +LT+  L A DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSDNPS-IVLHVLTTCNLYAQDLAKLEATCSFFKRPANFDPDFDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      ++     Q+  G  H++ + 
Sbjct: 107 RAIFNPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACYRREKS-----QVIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           S   V+S GS+  G LGHG  TT+     R I       ++Q +A+      +  SGQV+
Sbjct: 162 SKGVVYSFGSNSSGQLGHG--TTEDGWQPRPIRALQGIRIIQATAATGRTMLISDSGQVY 219

Query: 186 TCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
             G    FC      + ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T    
Sbjct: 220 AFG-KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWG 278

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFC 300
           + G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G    
Sbjct: 279 SDGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGK 338

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG + DE  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LGHG+E
Sbjct: 339 LGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNE 398

Query: 361 IDKTLPEPLSSLKSHLAV 378
               +P+ +  LK+  AV
Sbjct: 399 ECALVPKVVEELKNVKAV 416



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 103/231 (44%), Gaps = 35/231 (15%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  + G LGHG ET +        F  +N      
Sbjct: 307 VQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNL----Q 362

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + ++A   HAA V Q G+V T G     C GH +    +  P++VE LK V    V AG
Sbjct: 363 PMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECALV-PKVVEELKNVKAVHVAAG 421

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT--------LDRPTPKSIAPLEE-VGSVVQIA 275
              T  ++  G  ++ G    G LGH            D  TPK +  +++    V+QI+
Sbjct: 422 DYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMHADVLTPKLVTSMKQNYERVIQIS 481

Query: 276 AGPS-----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
              S     +  A+T +G +Y+FG+G    LG       ++ R  QT RRK
Sbjct: 482 LTNSVYWIAHTFALTESGKLYAFGAGDKGQLG-------VELRPYQTERRK 525


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 184/385 (47%), Gaps = 30/385 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLYPEDLAHLEATCKFFRKPANFPPDFLLPMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  MS   +     RC G+WK VLRF+ + E      ++     Q   G  H++ +S
Sbjct: 108 RAIFKPMSTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVS 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S + ++ GS+  G LGH        P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G+V+  G +S      G++ + R +  P++VE+LK +   Q   G  FT  L+  G V
Sbjct: 215 DAGRVYAFGKDSFGEVEFGNQGS-RAVATPQMVESLKDIYIVQAAIGNFFTAVLSREGCV 273

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT---GNGVVYSF 293
           +T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+        VYS 
Sbjct: 274 YTFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSV 332

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LGHG + DE  PR I+ F+   I  + V+AG  H   +   G V TWG G  G
Sbjct: 333 GCGLGGKLGHGTRTDEKYPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYG 392

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAV 378
            LGHG+E  +++P+ + +L S  AV
Sbjct: 393 CLGHGNEECESVPKVVEALSSVKAV 417



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 118/301 (39%), Gaps = 36/301 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           R +   Q VE   DI       +Q   G + T ++S       FS GS +   LGH  E 
Sbjct: 238 RAVATPQMVESLKDIY-----IVQAAIGNFFTAVLSREGCVYTFSWGSDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGTRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  +   V AG      +   G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V +V  +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 408 VEALSSVKAVY-VATGDYTTFIVSCKGDVYSFGCGESSSLGHNTTIEGNNRHSNVLSPEL 466

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLP 366
           + + + K   VV+VS       + H  AL  SG +Y +G G  G LG      E ++  P
Sbjct: 467 VTSLQSKNEKVVQVSLTNSVYWNAHTFALTESGKLYAFGAGDKGQLGSELVSQESERGTP 526

Query: 367 E 367
           E
Sbjct: 527 E 527


>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Glycine max]
          Length = 539

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 183/381 (48%), Gaps = 20/381 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEATCSFFKQPANFAPDFDLSLSELAALDMCQK 109

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      E S    Q+  G  H++ + 
Sbjct: 110 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS----QVIAGPGHSIAVT 165

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ +
Sbjct: 166 SKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAY 223

Query: 186 TCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 224 VFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTF 280

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGS 297
                G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G 
Sbjct: 281 SWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGL 340

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LGH
Sbjct: 341 GGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGH 400

Query: 358 GDEIDKTLPEPLSSLKSHLAV 378
           G+E  + +P+ +  L++  AV
Sbjct: 401 GNEECELVPKVVEELRNVKAV 421



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 37/287 (12%)

Query: 90  WK-RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCG----VLG 143
           W+ R +R LQ +     I++ +A      TGR  T+LIS+S   +  G    G    ++ 
Sbjct: 190 WQPRPIRALQGIR----IIQATA-----MTGR--TMLISDSGQAYVFGKESFGEVETIVN 238

Query: 144 HGPE---TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--R 198
            G +   T Q V   +  F     VVQ +      A + + G+V+T    S  C G    
Sbjct: 239 RGSKIVTTPQLVESLKNIF-----VVQAAMGNYFTAVLSREGRVYTF---SWGCVGKLCH 290

Query: 199 DTNRPIFRPR-LVEALKGVPCKQVTAGLNFTGFLTIRGH---VHTCGSNTHGQLGHGDTL 254
            T++    PR L+ AL+ +P  Q+ AG  +   L  +     V++ G    G+LGHG   
Sbjct: 291 QTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKT 350

Query: 255 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           +   P+ I   + +    + IAAG  +   V  +G V ++G GS  CLGHG +  EL P+
Sbjct: 351 NEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPK 410

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            ++  R   +  V V+ GD     +  SG VY++G G  G+LGH  E
Sbjct: 411 VVEELRN--VKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPE 455



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 16/165 (9%)

Query: 207 PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E  +   +    + AG      +   G V T G  ++G LGHG+      PK +  
Sbjct: 355 PRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEE 414

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE-------LQPRAIQ 316
           L  V   V +A G      V+ +G VYSFG G +  LGH  E H++       L P+ + 
Sbjct: 415 LRNV-KAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVT 473

Query: 317 TFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALG 356
             ++    VV++S       + H  AL  SG +Y +G G  G LG
Sbjct: 474 WMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLG 518



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           +V AG  H +A+ S G VY++G    G LGHG   D   P P+ +L+    +Q  ++
Sbjct: 153 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDVWQPRPIRALQGIRIIQATAM 209


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 180/376 (47%), Gaps = 12/376 (3%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPAHFAPDFELSISELAALDMCLK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M    +  L  RC G+WK VLRFL + E      ++     Q   G  H++ ++
Sbjct: 107 RAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 128 -NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
              +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+ 
Sbjct: 162 VKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYA 220

Query: 187 CGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +     + +  P+LVE+LK +   Q   G  FT  L+  G V+T      
Sbjct: 221 FGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNFCLG 302
            +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G    LG
Sbjct: 281 AKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLG 340

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG + DE  PR I+ FR   +  + V+AG  H   +   G V TWG G  G LGHG+E  
Sbjct: 341 HGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEEC 400

Query: 363 KTLPEPLSSLKSHLAV 378
           +++P+ + +L +  AV
Sbjct: 401 ESVPKVVEALINVKAV 416



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 109/266 (40%), Gaps = 29/266 (10%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS G+     LGH  E         +       VVQ++A
Sbjct: 254 VQAAIGNFFTAVLSREGRVYTFSWGND--AKLGHQTEANDLEPHPLLGALENIPVVQIAA 311

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 312 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEK---HPRLIEQFRILNLQPMVVAA 368

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 369 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINV-KAVHVATGDYTTFV 427

Query: 284 VTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH       G +H + L P  + + ++    +V++S      
Sbjct: 428 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 487

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALG 356
            + H  AL  +G +Y +G G  G LG
Sbjct: 488 WNAHTFALTETGKLYAFGAGDKGQLG 513


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 182/377 (48%), Gaps = 15/377 (3%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE ++     ++   P    S+ +LAA  +C  
Sbjct: 49  FPLAASPS-IVLHVLTTCNLDPQDLAKLEASALLLQPAN-FAPDYELSISELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLRFL + E           N Q   G  H++ + 
Sbjct: 107 RAIFKPMTSEERRDLKQRCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-NTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGQVYA 220

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 221 FGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGS 279

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGSNFCL 301
            G+LGH        P  +    E   VVQIAAG  Y+LA+        VYS G G    L
Sbjct: 280 DGKLGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 340 GHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 399

Query: 362 DKTLPEPLSSLKSHLAV 378
            +++P+ + +L +  AV
Sbjct: 400 CESVPKVVDALSNIKAV 416



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 109/269 (40%), Gaps = 32/269 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  E T       +       VVQ++A
Sbjct: 254 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHQTEPTDVEPHPLLGALENIPVVQIAA 311

Query: 171 SENHA-AFVLQ-SGQ-VFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q SG  V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 312 GYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK---YPRLIEQFQLLNLQPMVVAA 368

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  +   V +A G      
Sbjct: 369 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSNI-KAVHVATGDYTTFV 427

Query: 284 VTGNGVVYSFGSGSNFCLGH-----------GEQHDELQPRAIQTFRRKGIHVVRVSA-- 330
           V+  G VYSFG G +  LGH           G   + L P  + + +     VV++S   
Sbjct: 428 VSEEGDVYSFGCGESASLGHNAAAAANADGQGRHANVLSPELVTSLKEVNERVVQISLTN 487

Query: 331 ---GDEHVVALDSSGYVYTWGKGYCGALG 356
               + H  AL  SG +Y +G G  G LG
Sbjct: 488 SIYWNAHTFALTDSGKLYAFGAGDKGQLG 516


>gi|147858211|emb|CAN79677.1| hypothetical protein VITISV_011751 [Vitis vinifera]
          Length = 454

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 120/236 (50%), Gaps = 32/236 (13%)

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           ET  C++F++INFPS A V QVS S NHAAFV+QSG+  TCG+ SSF CGH DT  P+FR
Sbjct: 200 ETKPCMAFSKINFPSLAPVTQVSTSHNHAAFVMQSGEASTCGNYSSFRCGHGDTVCPMFR 259

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
              VEALK VP KQV A  +F  FL I+GHV  CG N HGQLG+GDT+DR T K +  LE
Sbjct: 260 LDFVEALKEVPYKQVVARFSFAAFLPIKGHVFACGMNIHGQLGYGDTVDRRTLKIVELLE 319

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            V  V                             L HG++  +  P  + +   K    V
Sbjct: 320 GVDPVG---------------------------ALDHGDEIGKTAPEILSSL--KSHLAV 350

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQ 379
           +V         L  +G  Y  G+   G+ G    GD    T P  L +L+ H   Q
Sbjct: 351 QVCVWKRKTFVLVDTGSAYGLGQMGFGSFGFPDRGDSDKVTRPWILDNLRGHYISQ 406



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 99/243 (40%), Gaps = 36/243 (14%)

Query: 144 HGPETTQCVSFTRINFPSA--AHVVQVSASENHAAFVLQSGQVFTCGDNSSFC----CGH 197
           H P  T  + F  + + +    HV++V   EN        G V     +  +       +
Sbjct: 138 HHPSHTYTILFLSMRYVTRYRRHVMKVEPFENEQVAAASMGTVKNWAISFEYMEIILPAN 197

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DR 256
            +  +P      +      P  QV+   N   F+   G   TCG+ +  + GHGDT+   
Sbjct: 198 DNETKPCMAFSKINFPSLAPVTQVSTSHNHAAFVMQSGEASTCGNYSSFRCGHGDTVCPM 257

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
                +  L+EV    Q+ A  S+   +   G V++ G   +  LG+G+  D        
Sbjct: 258 FRLDFVEALKEV-PYKQVVARFSFAAFLPIKGHVFACGMNIHGQLGYGDTVD-------- 308

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
              R+ + +V +  G + V                 GAL HGDEI KT PE LSSLKSHL
Sbjct: 309 ---RRTLKIVELLEGVDPV-----------------GALDHGDEIGKTAPEILSSLKSHL 348

Query: 377 AVQ 379
           AVQ
Sbjct: 349 AVQ 351


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 181/379 (47%), Gaps = 23/379 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSACDLDPKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +++  M +  Q  L  RC G+WK VL+++        +V    G+ ++  G  H+++IS
Sbjct: 111 RTMFKLMKQEDQECLKQRCGGSWKHVLKYI--------LVREKNGS-RVIAGPGHSIVIS 161

Query: 128 -NSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            N  V+S G++  G LG G    +   C+    I       + Q +        V  +G 
Sbjct: 162 SNGDVYSFGANCSGQLGLGDSEDRFRPCI----IRSLQGIRITQAAVGSRWTMLVSDTGS 217

Query: 184 VFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           V+  G DN        D +  I  P++VE+LKGV   Q   G  F+  L+  G V+T   
Sbjct: 218 VYAFGKDNFRGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSW 277

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNF 299
               +LGH        P+ ++ LE+V  V  I+AG  Y  MLA   NG+ VYS G G   
Sbjct: 278 GKEERLGHSSDPSDVEPRLLSGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGG 336

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG + ++  P+ I+ F+      V ++AG  H  AL + G V TWG G+ G LGHGD
Sbjct: 337 KLGHGCKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGD 396

Query: 360 EIDKTLPEPLSSLKSHLAV 378
           E  K +P  +  L+   AV
Sbjct: 397 EEYKAVPTLVEGLRDVKAV 415



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 18/167 (10%)

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+L+E  + +  K V+  AG      L   G V T G    G LGHGD   +  P  +  
Sbjct: 349 PKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGDEEYKAVPTLVEG 408

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE----LQPRAIQTFRR 320
           L +V   V ++ G      V  NG VYSFGSG +      ++ +E      P  + + + 
Sbjct: 409 LRDV-KAVHLSTGEYTTFVVAENGDVYSFGSGESLVFQEDDEAEEGPDFSTPSIVSSLKA 467

Query: 321 KGIHVVRVSA-----------GDEHVVALDSSGYVYTWGKGYCGALG 356
               VV++S            G  H  A+  SG +  +G G  G LG
Sbjct: 468 LNKKVVQISPTNASYWLNSEMGHPHTFAVMDSGDLCAFGGGIRGQLG 514


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 184/377 (48%), Gaps = 19/377 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDSDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H++ ++
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLVLRYLMAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 128 NSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           +   V+S GS+  G LGHG  TT+     R I       ++Q +A       V  SGQV+
Sbjct: 162 SKGIVYSFGSNSSGQLGHG--TTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVY 219

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
             G+      G    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 220 AFGEAEYGVQG----SKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 275

Query: 246 GQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFCL 301
            +LGH  D  D      +  LE +  VVQIAAG  Y+L  A   +G+ VYS G G    L
Sbjct: 276 EKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 334

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 335 GHGSRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 394

Query: 362 DKTLPEPLSSLKSHLAV 378
            +++P+ + +L +  AV
Sbjct: 395 CESVPKVVEALSNVKAV 411



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 17/166 (10%)

Query: 207 PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E   L  +    V AG      +   G V T G   +G LGHG+      PK +  
Sbjct: 345 PRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEA 404

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--------GEQHDE-LQPRAI 315
           L  V   V +A G      V+ +G VYSFG G +  LGH        G +H + L P  +
Sbjct: 405 LSNV-KAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAKVLDPELV 463

Query: 316 QTFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALG 356
            + ++    VV++S       + H  AL  SG +Y +G G  G LG
Sbjct: 464 TSLKQINERVVQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLG 509


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 176/376 (46%), Gaps = 12/376 (3%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYELSISELAALDMCRK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+      +  RC G+WK VLRFL + E           +M I    +   + S
Sbjct: 107 RAIFKPMTPEQHEAMKQRCGGSWKLVLRFLVAGESCC----RREKSMAIAGPGHSIAVTS 162

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 186
             +V+S GS+  G LGHG  TT+  S  R I       ++Q +A       +  +G V+ 
Sbjct: 163 KGAVYSFGSNSSGQLGHG--TTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYA 220

Query: 187 CGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +     + +  P+LVE+LK +   Q   G  FT  L+  G V+T    T 
Sbjct: 221 FGKDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTD 280

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGSNFCLG 302
            +LGH    +   P+ +    E   VVQIAAG  Y+LA+        VYS G G    LG
Sbjct: 281 SRLGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLG 340

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG + DE  PR I+ F+   +  V V+AG  H   +   G V TWG G  G LGHG+E  
Sbjct: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDC 400

Query: 363 KTLPEPLSSLKSHLAV 378
           ++ P+ + +L +  AV
Sbjct: 401 ESSPKVVEALINVKAV 416



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 20/186 (10%)

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNT 244
           CG       G R   +    PRL+E  + +  + V   AG      +   G V T G   
Sbjct: 333 CGLGGKLGHGSRTDEK---HPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGR 389

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
           +G LGHG+     +PK +  L  V   V +A G      V+ +G VYSFG G +  LGH 
Sbjct: 390 YGCLGHGNEDCESSPKVVEALINV-KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN 448

Query: 304 --------GEQHDELQPRAIQTFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKG 350
                     Q   L+P  +++ ++    VV++S       + H  AL  SG +Y +G G
Sbjct: 449 VVLPEEEGNRQPHVLKPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 508

Query: 351 YCGALG 356
             G LG
Sbjct: 509 DKGQLG 514


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 183/384 (47%), Gaps = 28/384 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  +   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNVEPEDLAHLEATCKFFRKPANFPPDFQLPMSELAALDMCHK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +     RC G+WK VLRF+ + E      ++     Q   G  H++ ++
Sbjct: 108 RAIFKHMTTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S +V++ GS+  G LGH        P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            +G+V+  G +S     +    +R +  P++VE+LK +   Q   G  FT  L+  G V+
Sbjct: 215 DAGRVYAFGKDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGNFFTAVLSREGCVY 274

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFG 294
           T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+        VYS G
Sbjct: 275 TFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSVG 333

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G  G 
Sbjct: 334 CGLGGKLGHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGC 393

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAV 378
           LGHG+E  +++P+ + +L S  AV
Sbjct: 394 LGHGNEECESVPKVVEALGSVKAV 417



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 114/287 (39%), Gaps = 33/287 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS GS +   LGH  E 
Sbjct: 238 RVVTTPQMVESLKDIY-----IVQAAIGNFFTAVLSREGCVYTFSWGSDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      ++  G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V   V +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 408 VEALGSV-KAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTIIEGNNRHSNVLSPEL 466

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALG 356
           + + +R    VV+VS       + H  AL  SG +Y +G G  G LG
Sbjct: 467 VTSLKRTNERVVQVSLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 182/377 (48%), Gaps = 14/377 (3%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPANFAPDLDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK  LR+L + E      ++     Q   G  H++ + 
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLALRYLMAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +      I       ++Q +A       V  SGQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-TTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYA 220

Query: 187 CGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 221 FGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 280

Query: 246 GQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFCL 301
           G+LGH  D  D      +  LE +  VVQIAAG  Y+L  A   +G+ VYS G G    L
Sbjct: 281 GKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 340 GHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 399

Query: 362 DKTLPEPLSSLKSHLAV 378
            +++P+ + +L +  AV
Sbjct: 400 CESVPKVVEALSNVKAV 416



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 109/267 (40%), Gaps = 30/267 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  + +       +       VVQ++A
Sbjct: 254 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHHTDQSDVEPHPLLGALENIPVVQIAA 311

Query: 171 SENHA---AFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTA 223
              +    A       V++  CG       G R   +    PRL+E   L  +    V A
Sbjct: 312 GYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEK---YPRLIEQFGLLNLQPMVVAA 368

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 369 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNV-KAVHVATGDYTTFV 427

Query: 284 VTGNGVVYSFGSGSNFCLGH--------GEQH-DELQPRAIQTFRRKGIHVVRVSA---- 330
           V+ +G VYSFG G +  LGH        G +H + L P  + + ++    VV++S     
Sbjct: 428 VSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSI 487

Query: 331 -GDEHVVALDSSGYVYTWGKGYCGALG 356
             + H  AL  SG +Y +G G  G LG
Sbjct: 488 YWNAHTFALTESGKLYAFGAGDKGQLG 514


>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 179/381 (46%), Gaps = 18/381 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTS----KTFGGSHGLYPQKFRSLVDLAASQ 63
           F +   PS ++  +LT+  L   DLA LE  S      F       P    S+ +LAA  
Sbjct: 48  FPLAANPS-IVLHVLTTCNLDPQDLAKLEAKSIATCSFFRQPASFAPDYELSMSELAALD 106

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C   +I+  M+   + +L  RC G+WK VLRFL + E       +     Q   G  H+
Sbjct: 107 MCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERS-----QAIAGPGHS 161

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + SN   +S GS+  G LGHG  T +     +I       ++Q +A       +  +G
Sbjct: 162 IAVTSNGVAYSFGSNSSGQLGHG-TTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAG 220

Query: 183 QVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +V+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 221 EVYAFGKDSFGEAEYGVQGT-KTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 279

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGS 297
                G+LGH    +   P  +    E   VVQIAAG  Y+LA+        VYS G G 
Sbjct: 280 SWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGL 339

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGH
Sbjct: 340 GGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGH 399

Query: 358 GDEIDKTLPEPLSSLKSHLAV 378
           G+E  +++P+ + +L    AV
Sbjct: 400 GNEECESVPKVVDALSKVKAV 420



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 111/266 (41%), Gaps = 29/266 (10%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS G+   G LGH  E    V    +       VVQ++A
Sbjct: 258 VQAAIGNFFTAVLSREGRVYTFSWGND--GKLGHQTEPNDVVPHPLLGALENIPVVQIAA 315

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 316 GYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK---YPRLIEQFQLLNLQPMVVAA 372

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L +V   V +A G      
Sbjct: 373 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKV-KAVHVATGDYTTFV 431

Query: 284 VTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH       G +H + L P  + + +     VV++S      
Sbjct: 432 VSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVY 491

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALG 356
            + H  AL  SG ++ +G G  G LG
Sbjct: 492 WNAHTFALTESGKLFAFGAGDKGQLG 517


>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           2 [Glycine max]
          Length = 535

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 184/381 (48%), Gaps = 24/381 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE +++         P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEASAQ----PANFAPDFDLSLSELAALDMCQK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      E S    Q+  G  H++ + 
Sbjct: 106 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS----QVIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ +
Sbjct: 162 SKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAY 219

Query: 186 TCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 220 VFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTF 276

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGS 297
                G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G 
Sbjct: 277 SWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGL 336

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LGH
Sbjct: 337 GGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGH 396

Query: 358 GDEIDKTLPEPLSSLKSHLAV 378
           G+E  + +P+ +  L++  AV
Sbjct: 397 GNEECELVPKVVEELRNVKAV 417



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 37/287 (12%)

Query: 90  WK-RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCG----VLG 143
           W+ R +R LQ +     I++ +A      TGR  T+LIS+S   +  G    G    ++ 
Sbjct: 186 WQPRPIRALQGIR----IIQATA-----MTGR--TMLISDSGQAYVFGKESFGEVETIVN 234

Query: 144 HGPE---TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--R 198
            G +   T Q V   +  F     VVQ +      A + + G+V+T    S  C G    
Sbjct: 235 RGSKIVTTPQLVESLKNIF-----VVQAAMGNYFTAVLSREGRVYTF---SWGCVGKLCH 286

Query: 199 DTNRPIFRPR-LVEALKGVPCKQVTAGLNFTGFLTIRGH---VHTCGSNTHGQLGHGDTL 254
            T++    PR L+ AL+ +P  Q+ AG  +   L  +     V++ G    G+LGHG   
Sbjct: 287 QTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKT 346

Query: 255 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           +   P+ I   + +    + IAAG  +   V  +G V ++G GS  CLGHG +  EL P+
Sbjct: 347 NEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPK 406

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            ++  R   +  V V+ GD     +  SG VY++G G  G+LGH  E
Sbjct: 407 VVEELRN--VKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPE 451



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 16/165 (9%)

Query: 207 PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E  +   +    + AG      +   G V T G  ++G LGHG+      PK +  
Sbjct: 351 PRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEE 410

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE-------LQPRAIQ 316
           L  V   V +A G      V+ +G VYSFG G +  LGH  E H++       L P+ + 
Sbjct: 411 LRNV-KAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVT 469

Query: 317 TFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALG 356
             ++    VV++S       + H  AL  SG +Y +G G  G LG
Sbjct: 470 WMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           +V AG  H +A+ S G VY++G    G LGHG   D   P P+ +L+    +Q  ++
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDVWQPRPIRALQGIRIIQATAM 205


>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
 gi|194702102|gb|ACF85135.1| unknown [Zea mays]
 gi|194704788|gb|ACF86478.1| unknown [Zea mays]
 gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
 gi|219884475|gb|ACL52612.1| unknown [Zea mays]
 gi|223949899|gb|ACN29033.1| unknown [Zea mays]
 gi|224030775|gb|ACN34463.1| unknown [Zea mays]
 gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
 gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 3 [Zea mays]
          Length = 535

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 174/378 (46%), Gaps = 21/378 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L+S  L   DLA+LE T   FG      P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSSCDLGPKDLANLEATCVFFGKPASFAPDFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +++  M +  Q  L  RC G+WK VL ++        +V    G+  I    +  ++ S
Sbjct: 111 RTMFKQMKQEDQECLKQRCGGSWKHVLGYI--------LVREKNGSRVIAGPGHSIIITS 162

Query: 128 NSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           N  V+S G++  G LG G    +   CV    I       + Q +        V  +G V
Sbjct: 163 NGDVYSFGANCSGQLGLGDSEDRFKPCV----IRSLQGIRITQAAVGSRCTMLVSDTGSV 218

Query: 185 FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++ G          D  +  I  PR+ E+LKGV   Q   G  F+  L+  G V+T    
Sbjct: 219 YSFGKEDFRVAELVDGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWG 278

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFC 300
              +LGH        P+ +  LE+V  V  I+AG  Y  MLA   NG+ VYS G G    
Sbjct: 279 KAERLGHSSDPSDVEPRLLPGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGK 337

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG + +   P+ ++ F+      V ++AG  H VAL + G V TWG G+ G LGHGDE
Sbjct: 338 LGHGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDE 397

Query: 361 IDKTLPEPLSSLKSHLAV 378
             + +P  +  L+   AV
Sbjct: 398 ECRAVPTVVEGLRDVKAV 415



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 69/167 (41%), Gaps = 18/167 (10%)

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+LVE  + +  K V+  AG      L   G V T G    G LGHGD   R  P  +  
Sbjct: 349 PKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDEECRAVPTVVEG 408

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRAIQTFRR 320
           L +V   V ++ G      V  NG VYSFGSG +          E+ D   P  + + + 
Sbjct: 409 LRDV-KAVHVSTGEYTTFVVAENGDVYSFGSGESLAFQLDDEAEEEPDSSTPSIVSSLKD 467

Query: 321 KGIHVVRVS-----------AGDEHVVALDSSGYVYTWGKGYCGALG 356
               VV++S            G  H  A+  SG V  +G G  G LG
Sbjct: 468 LNKKVVQISHTNASYWMNSEMGHPHTFAVMDSGDVCAFGGGVRGQLG 514


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/336 (33%), Positives = 172/336 (51%), Gaps = 28/336 (8%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQ---IELLNRC-NGNWKRVLRFLQSVEHS 103
           L P+K   L D+ A      HS+    S +V      L  R  +GN    L   + +E  
Sbjct: 69  LAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLE-PKKIEGL 127

Query: 104 SDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           SDI         I  G +H+L ++ S  V+S G+   G LGHG    Q    T     S 
Sbjct: 128 SDI-------QAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQS---TPKKIESL 176

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V  ++A  NH+  + +SG V++ G       GH DT+  +  P+ +E L  +  + + 
Sbjct: 177 SDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQL-EPKKIEDLSDI--QAIA 233

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N +  LT  G V++ G   HGQLGHGDT ++ TPK I   E++  +  +AAG ++ L
Sbjct: 234 AGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI---EDLSDIQAVAAGANHSL 290

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G VYSFG G+   LGHG+  D+L P+ I+  +     +  ++AGD H +AL  SG
Sbjct: 291 ALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLK----DIQAIAAGDFHSLALTKSG 346

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            VY++G G  G LGHGD  ++  P+ +  L    A+
Sbjct: 347 DVYSFGNGTSG-LGHGDTANQLEPKKIEGLTDIQAI 381



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 137/249 (55%), Gaps = 14/249 (5%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           SVFS G  + G LGHG +T   ++  +I     + +  ++A  NH+  + +SG V++ G 
Sbjct: 48  SVFSFGMGMYGKLGHG-DTANQLAPKKIE--GLSDIQAIAAGTNHSLALTKSGDVYSFGF 104

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH +T+  +  P+ +E L  +  + + AG   +  LT  G V++ G+ T G LG
Sbjct: 105 GLFGRLGHGNTDSQL-EPKKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG+T D+ TPK I  L +V +   IAAG ++ LA+T +G VYSFG G    LGHG+   +
Sbjct: 161 HGNTEDQSTPKKIESLSDVQA---IAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQ 217

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L+P+ I+        +  ++AG  H +AL  SG VY++G G  G LGHGD  ++  P+ +
Sbjct: 218 LEPKKIEDLS----DIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI 273

Query: 370 SSLKSHLAV 378
             L    AV
Sbjct: 274 EDLSDIQAV 282


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 182/379 (48%), Gaps = 16/379 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL--TSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           F +   PS ++  +LT+  L   DLA LE   T   F       P    S+ +LAA  +C
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEASATCSFFRQPAHFAPDFELSISELAALDMC 106

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
              +I+  M    +  L  RC G+WK VLRFL + E      ++     Q   G  H++ 
Sbjct: 107 LKRAIFRPMXLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS-----QAIAGPGHSIA 161

Query: 126 IS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           ++   +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV
Sbjct: 162 VTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQV 220

Query: 185 FTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T   
Sbjct: 221 YAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 279

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNF 299
               +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G   
Sbjct: 280 GNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGG 339

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGHG+
Sbjct: 340 KLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGN 399

Query: 360 EIDKTLPEPLSSLKSHLAV 378
           E  +++P+ + +L +  AV
Sbjct: 400 EECESVPKVVEALINVKAV 418



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 16/165 (9%)

Query: 207 PRLVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E  + +  +   V AG      +   G V T G   +G LGHG+      PK +  
Sbjct: 352 PRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEA 411

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQ 316
           L  V   V +A G      V+ +G VYSFG G +  LGH       G +H + L P  + 
Sbjct: 412 LINV-KAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVT 470

Query: 317 TFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALG 356
           + ++    +V++S       + H  AL  +G +Y +G G  G LG
Sbjct: 471 SLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 515


>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 175/376 (46%), Gaps = 17/376 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 124 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 182

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK V +++ + E +           +I  G  H+++++
Sbjct: 183 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARERNYS---------RIVAGPGHSIVVT 233

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I    +  + Q +        V  +G V+ 
Sbjct: 234 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYA 292

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 293 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 352

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 353 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 411

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE  
Sbjct: 412 HGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEY 471

Query: 363 KTLPEPLSSLKSHLAV 378
           + LP  +  L +  AV
Sbjct: 472 RVLPTVVQGLSNVKAV 487



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+L+E    +    V+  AG      L   G V T G    G LGHGD   R  P  +  
Sbjct: 421 PKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQG 480

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-----------------EQH 307
           L  V   V ++ G      V+ NG  YSFGS  +  +G                   E  
Sbjct: 481 LSNV-KAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFSTPSLVESL 539

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             L  +A+Q       + +    G  H  AL  SG +Y +G G  G LG
Sbjct: 540 KVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 588


>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
 gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 537

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 175/376 (46%), Gaps = 17/376 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK V +++ + E +           +I  G  H+++++
Sbjct: 111 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARERNYS---------RIVAGPGHSIVVT 161

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I    +  + Q +        V  +G V+ 
Sbjct: 162 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYA 220

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 221 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 280

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 281 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 339

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE  
Sbjct: 340 HGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEY 399

Query: 363 KTLPEPLSSLKSHLAV 378
           + LP  +  L +  AV
Sbjct: 400 RVLPTVVQGLSNVKAV 415



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+L+E    +    V+  AG      L   G V T G    G LGHGD   R  P  +  
Sbjct: 349 PKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQG 408

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-----------------EQH 307
           L  V   V ++ G      V+ NG  YSFGS  +  +G                   E  
Sbjct: 409 LSNV-KAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFSTPSLVESL 467

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             L  +A+Q       + +    G  H  AL  SG +Y +G G  G LG
Sbjct: 468 KVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 516


>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
 gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
          Length = 508

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 182/386 (47%), Gaps = 32/386 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 21  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 79

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +  L   C G+WK VLRFL++ E     +      +Q   G  H+++++
Sbjct: 80  RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGE-----LCYRREKIQAIAGPGHSIVVT 134

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            + +V++ GSS  G LGHG       P   + +   RI        +Q +A       + 
Sbjct: 135 KTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLIS 186

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  G
Sbjct: 187 DTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREG 243

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYS 292
            V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VYS
Sbjct: 244 RVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYS 303

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +   G V TWG G  
Sbjct: 304 VGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRY 363

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAV 378
           G LGHG+E  + LP+ + SL+   AV
Sbjct: 364 GCLGHGNEDCELLPKVVESLQGVKAV 389



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 21/209 (10%)

Query: 114 MQITTGRYHTLLISNSS----VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQV 168
           +QI  G  + L ++  S    V+S G  L G LGHG  + +       +F       + V
Sbjct: 280 VQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAV 339

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   HAA V + G+V T G     C GH + +  +  P++VE+L+GV    V  G   T
Sbjct: 340 AAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCELL-PKVVESLQGVKAVHVATGDYTT 398

Query: 229 GFLTIRGHVHTCGSNTHGQLGH--GDTLDRPT-------PKSIAPLEEVG-SVVQIAAGP 278
             +T  G V +CG      LGH  G T  +         P+ ++ L++    V+QI+   
Sbjct: 399 FVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTN 458

Query: 279 S-----YMLAVTGNGVVYSFGSGSNFCLG 302
           S     +  A+  +G +++FG+G    LG
Sbjct: 459 SVTWNAHTFALCDSGRLFAFGAGDKGQLG 487



 Score = 37.7 bits (86), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           +RR+ I  +   AG  H + +  +G VYT+G    G LGHG   ++  P  L SL+    
Sbjct: 116 YRREKIQAI---AGPGHSIVVTKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQ---G 169

Query: 378 VQGLSVLAEVCPTIVQEDT 396
           V+ +   A V  T++  DT
Sbjct: 170 VRIIQATAGVGRTMLISDT 188


>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
 gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
          Length = 539

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 182/386 (47%), Gaps = 32/386 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 52  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +  L   C G+WK VLRFL++ E     +      +Q   G  H+++++
Sbjct: 111 RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGE-----LCYRREKIQAIAGPGHSIVVT 165

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            + +V++ GSS  G LGHG       P   + +   RI        +Q +A       + 
Sbjct: 166 KTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLIS 217

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  G
Sbjct: 218 DTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREG 274

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYS 292
            V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VYS
Sbjct: 275 RVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYS 334

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +   G V TWG G  
Sbjct: 335 VGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRY 394

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAV 378
           G LGHG+E  + LP+ + SL+   AV
Sbjct: 395 GCLGHGNEDCELLPKVVESLQGVKAV 420



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 33/215 (15%)

Query: 114 MQITTGRYHTLLISNSS----VFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +QI  G  + L ++  S    V+S G  L G LGHG       P+  +     R+     
Sbjct: 311 VQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRL----- 365

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              + V+A   HAA V + G+V T G     C GH + +  +  P++VE+L+GV    V 
Sbjct: 366 -QPIAVAAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCELL-PKVVESLQGVKAVHVA 423

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPT-------PKSIAPLEEVG-SVV 272
            G   T  +T  G V +CG      LGH  G T  +         P+ ++ L++    V+
Sbjct: 424 TGDYTTFVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVL 483

Query: 273 QIAAGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
           QI+   S     +  A+  +G +++FG+G    LG
Sbjct: 484 QISLTNSVTWNAHTFALCDSGRLFAFGAGDKGQLG 518


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 163/329 (49%), Gaps = 13/329 (3%)

Query: 56  LVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQ 115
           + +LAA  +C   +I+  M++  +     RC G+WK VLRF+ + E      ++     Q
Sbjct: 1   MSELAALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----Q 55

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
              G  H++ ++ S +V++ GS+  G LGHG    +      I       ++Q +A    
Sbjct: 56  AIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRI-IRSLQGIRIIQAAAGAGR 114

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+ 
Sbjct: 115 TMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSR 174

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGV 289
            GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        
Sbjct: 175 EGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMS 233

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG 
Sbjct: 234 VYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGW 293

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G  G LGHG+E  +++P+ + SL +  AV
Sbjct: 294 GRYGCLGHGNEECESVPKVVESLVNVRAV 322



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 119/301 (39%), Gaps = 36/301 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS G+ +   LGH  E 
Sbjct: 143 RVVTTPQLVESLKDIY-----IVQAAIGNFFTAVLSREGHVYTFSWGNDM--KLGHQTEP 195

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQ-SGQ-VFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q SG  V++  CG       G R   + 
Sbjct: 196 NDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 254

Query: 204 IFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      +   G V T G   +G LGHG+      PK 
Sbjct: 255 --YPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 312

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V   V +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 313 VESLVNV-RAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 371

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLP 366
           + + +R    V ++S       + H  AL  SG +Y +G G  G LG      E ++  P
Sbjct: 372 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTP 431

Query: 367 E 367
           E
Sbjct: 432 E 432


>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 174/376 (46%), Gaps = 17/376 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 149 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 207

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK VL+++ + E +           +I  G  H+++++
Sbjct: 208 RPMVKLMAQQEREQLKQRCGGSWKLVLKYIVARERNYS---------RIVAGPGHSIVVT 258

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I       + Q +        V  +G V+ 
Sbjct: 259 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVYA 317

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 318 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 377

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 378 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 436

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG ++++   + I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE  
Sbjct: 437 HGCKNNKGTTKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEY 496

Query: 363 KTLPEPLSSLKSHLAV 378
           + LP  +  L +  AV
Sbjct: 497 RVLPTVVQGLSNVKAV 512



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 57/153 (37%), Gaps = 18/153 (11%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG      L   G V T G    G LGHGD   R  P  +  L  V   V ++ G   
Sbjct: 462 VAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNV-KAVHVSTGEYT 520

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHG-----------------EQHDELQPRAIQTFRRKGI 323
              V+ NG  YSFGS  +  +G                   E    L  +A+Q       
Sbjct: 521 TFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFSTPSLVESLKVLNDKAVQISTTNSS 580

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           + +    G  H  AL  SG +Y +G G  G LG
Sbjct: 581 YWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 613


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 172/360 (47%), Gaps = 16/360 (4%)

Query: 55  SLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM 114
           S+ +LAA  +C   +I+  M    +  L  RC G+WK VLRFL + E      ++     
Sbjct: 86  SISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS----- 140

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H++ ++   +V+S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 141 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAG 199

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
               +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 200 RTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVL 258

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV 289
           +  G V+T       +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+
Sbjct: 259 SREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGM 318

Query: 290 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS G G    LGHG + DE  PR I+ FR   +  + V+AG  H   +   G V TWG
Sbjct: 319 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWG 378

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCSDIICHDST 408
            G  G LGHG+E  +++P+ + +L   + V+ + V      T V  D        C +S+
Sbjct: 379 WGRYGCLGHGNEECESVPKVVEAL---INVKAVHVATGDYTTFVVSDDGDVYSFGCGESS 435



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 109/266 (40%), Gaps = 29/266 (10%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS G+     LGH  E         +       VVQ++A
Sbjct: 246 VQAAIGNFFTAVLSREGRVYTFSWGND--AKLGHQTEANDLEPHPLLGALENIPVVQIAA 303

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 304 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEK---HPRLIEQFRILNLQPMVVAA 360

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 361 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINV-KAVHVATGDYTTFV 419

Query: 284 VTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH       G +H + L P  + + ++    +V++S      
Sbjct: 420 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 479

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALG 356
            + H  AL  +G +Y +G G  G LG
Sbjct: 480 WNAHTFALTETGKLYAFGAGDKGQLG 505


>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
 gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
 gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 155/325 (47%), Gaps = 21/325 (6%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C    I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H+
Sbjct: 1   MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHS 55

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + S   V++ G +  G LGHG  T        +       ++Q +A       +   G
Sbjct: 56  VAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDG 114

Query: 183 QVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +V+ CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T 
Sbjct: 115 KVYACGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTF 173

Query: 241 GSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSF 293
                G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS 
Sbjct: 174 SWGNDGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSV 229

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G
Sbjct: 230 GCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYG 289

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAV 378
            LGHG+E  +++P+ +  L    AV
Sbjct: 290 CLGHGNEECESVPKVVEGLSHVKAV 314



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 28/280 (10%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G Y T ++S       FS G+   G LGH  E         +       VVQ++A
Sbjct: 152 VQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAA 209

Query: 171 SENHA-AFVLQSG--QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGL 225
              +  A   Q     V++ G       GH       + PR++E  +   +  + V AG 
Sbjct: 210 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKY-PRVIEQFQILNLQPRVVAAGA 268

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                +   G V T G   +G LGHG+      PK +  L  V   V +A G      V+
Sbjct: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHV-KAVHVATGDYTTFVVS 327

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHVVRVSA-----GD 332
            +G VYSFG G +  LGH    DE        L P  + + ++    +V++S       +
Sbjct: 328 DDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWN 387

Query: 333 EHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPL 369
            H  AL  SG ++ +G G  G LG     ++ ++ +PE +
Sbjct: 388 AHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKV 427


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 159/321 (49%), Gaps = 13/321 (4%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C   +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H+
Sbjct: 1   MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKS-----QAIAGPGHS 55

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + S   V+S GS+  G LGHG  T +      I       ++Q +A       +  SG
Sbjct: 56  IAVTSKGDVYSFGSNSSGQLGHGT-TEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSG 114

Query: 183 QVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           QV+  G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T  
Sbjct: 115 QVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGS 297
             + G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   +G+ VYS G G 
Sbjct: 175 WGSDGKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGL 233

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +  + +SAG  H   +   G V TWG G  G LGH
Sbjct: 234 GGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGH 293

Query: 358 GDEIDKTLPEPLSSLKSHLAV 378
           G+E  +  P+ + +L +  AV
Sbjct: 294 GNEECEAAPKVVDALTNVKAV 314



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 109/264 (41%), Gaps = 25/264 (9%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  ++        +       VVQ++A
Sbjct: 152 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHHTDSNDMEPHPLLGALEDIPVVQIAA 209

Query: 171 SENHA---AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTAGL 225
              +    A       V++ G       GH       F PRL+E  + +  +   ++AG 
Sbjct: 210 GYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKF-PRLIEQFQTLNLQPMVISAGA 268

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                +   G V T G   +G LGHG+      PK +  L  V   V +A G      V 
Sbjct: 269 WHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNV-KAVHVATGDYTTFVVA 327

Query: 286 GNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA-----GD 332
            +G VYSFG G +  LGH       G +H + L P  + + ++    VV++S       +
Sbjct: 328 EDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWN 387

Query: 333 EHVVALDSSGYVYTWGKGYCGALG 356
            H  AL  SG +Y +G G  G LG
Sbjct: 388 AHTFALTESGKLYAFGAGDKGQLG 411


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 143/293 (48%), Gaps = 15/293 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCG 140
           L   +  WK V R ++         E    N+ Q+T G YHT  ++ S  +++ G  + G
Sbjct: 66  LGHGDNGWKFVPRLVE---------ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYG 116

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
            LGHG ET     F  +       V QV+    H   +L++  V+T GD  +   GH DT
Sbjct: 117 KLGHGNETGHSTPFL-VETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDT 175

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
               + P  VE L+G    Q++A    T  L+  G V T G    G+LGH    ++P  +
Sbjct: 176 EGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +  L     V Q+A G  +  AVT  G VY++G G +  LGHG++ ++  P  +++   
Sbjct: 236 FVEALAG-KRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVE 294

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           K   VV+++ G  H VAL  +G VYTWG G  G LGH D    TLP+ +  L+
Sbjct: 295 K--LVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLE 345



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 122/237 (51%), Gaps = 9/237 (3%)

Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +VET  G    Q+  G  HT+ L+ N  V++ G    GV GHG           +     
Sbjct: 131 LVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRG 190

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQV 221
            ++VQ+SA   H A + + G+VFT G+      GH  + N+P+   R VEAL G   KQV
Sbjct: 191 KNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPV--ARFVEALAGKRVKQV 248

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  +T  G V+T G   HGQLGHGD +++  P  +  L E   VVQI  G S+ 
Sbjct: 249 ACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVE-KLVVQITCGWSHT 307

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +A+T  G VY++G+G +  LGH +      P+ +     +G  V+ V++ +EH VAL
Sbjct: 308 VALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVL--EGKRVISVASYNEHTVAL 362



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 134/270 (49%), Gaps = 11/270 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  HT+++++   V++ G    G LGHG    + V    +      ++ QV+   
Sbjct: 37  VQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVP-RLVEELRGKNIRQVTCGS 95

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A V  SG ++T G       GH  +T      P LVE LKG+  +QV  G   T  L
Sbjct: 96  YHTAAVTVSGDLYTWGGGMYGKLGHGNETGHST--PFLVETLKGMQVRQVACGSRHTVVL 153

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGV 289
                V+T G   +G  GHGDT          P+EE+   ++VQI+A   +  A++  G 
Sbjct: 154 LENKDVYTWGDKENGVSGHGDTEGHQYLP--CPVEELRGKNIVQISACGFHTAALSEFGE 211

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++FG G    LGH  + ++   R ++     G  V +V+ G  H  A+  +G VYTWG 
Sbjct: 212 VFTFGEGKFGRLGHNSERNQPVARFVEAL--AGKRVKQVACGGFHTAAVTETGEVYTWGG 269

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LGHGD+++KT+P  + SL   L VQ
Sbjct: 270 GEHGQLGHGDKVNKTVPTRVESLVEKLVVQ 299



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G    GQLG GDT D+  P  I  L E   +VQIA G  + + +T  G VY++G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER-RIVQIACGSGHTVVLTDEGEVYTWGRG 61

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            +  LGHG+   +  PR ++  R K I   +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 357 HGDEIDKTLPEPLSSLK 373
           HG+E   + P  + +LK
Sbjct: 120 HGNETGHSTPFLVETLK 136



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 5/197 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G       G  DT+    RP  ++AL      Q+  G   T  LT  G V+T G  
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQ-HRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRG 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             G+LGHGD   +  P+ +  L    ++ Q+  G  +  AVT +G +Y++G G    LGH
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRG-KNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EID 362
           G +     P  ++T   KG+ V +V+ G  H V L  +  VYTWG    G  GHGD E  
Sbjct: 121 GNETGHSTPFLVETL--KGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 363 KTLPEPLSSLKSHLAVQ 379
           + LP P+  L+    VQ
Sbjct: 179 QYLPCPVEELRGKNIVQ 195


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 15/292 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCG 140
           L   +  WK V R ++         E    N+ Q+T G YHT  ++ S  +++ G  + G
Sbjct: 66  LGHGDNGWKFVPRLVE---------ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYG 116

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
            LGHG ET     +  +    +  V QV+    H   +L++  V+T GD  +   GH DT
Sbjct: 117 KLGHGNETGHSTPYL-VETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDT 175

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
               + P  VE L+G    Q++A    T  L+  G V T G    G+LGH    ++P  +
Sbjct: 176 EGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +  L     V Q+A G  +  AVT  G VY++G G +  LGHG++ ++  P  +++   
Sbjct: 236 FVDALAG-KRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLE 294

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           K   V++++ G  H V L  +G VYTWG G  G LGH D    TLP+P+  L
Sbjct: 295 K--LVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVL 344



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 54/301 (17%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   + + G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-- 307
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG+    
Sbjct: 120 HGNETGHSTPYLVETLKSM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 308 -------DELQPRAIQTFRRKGIH------------------------------------ 324
                  +EL+ ++I      G H                                    
Sbjct: 179 QYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVD 238

Query: 325 ------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V +V+ G  H  A+  +G VYTWG G  G LGHGD+++KT+P  + SL   L +
Sbjct: 239 ALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVL 298

Query: 379 Q 379
           Q
Sbjct: 299 Q 299



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 5/155 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+   +HT  +S    VF+ G    G LGH  E  Q V+   ++  +   V QV+   
Sbjct: 194 VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA-RFVDALAGKRVKQVACGG 252

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A V ++G+V+T G       GH D  N+ +  P  VE+L      Q+T G + T  L
Sbjct: 253 FHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTV--PTRVESLLEKLVLQITCGWSHTVTL 310

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           T  G V+T G+  HG+LGH DT     PK +  L+
Sbjct: 311 TDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLD 345


>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
 gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
          Length = 529

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 177/399 (44%), Gaps = 25/399 (6%)

Query: 9   SIEELP----SHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
           S++++P      L+  +L+S  L   DLA LE+  + F       P    SL +LAA   
Sbjct: 35  SLQQIPLTSNPSLLLHVLSSYGLEPKDLAALEVACQFFRRPAKFEPDATLSLPELAAYDT 94

Query: 65  CALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL 124
           C   +I+  M +  +  L  RC G+WK VL +L   E +        G  ++  G  HT+
Sbjct: 95  CCQKAIFKSMEQKEKDSLKQRCGGSWKLVLTYLLVGEKN-----YHRGKSRVVAGPGHTI 149

Query: 125 LI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            + S   V+S G++  G LG G    QC     I       + Q +        V  +G 
Sbjct: 150 AVTSKGDVYSFGANSSGQLGLGNTEEQCKP-CLIRSLQGIRITQAAVGSRRTMLVSDTGS 208

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G +     G          P++VE+LKG+   Q + G +F+  L+  G V+T    
Sbjct: 209 VYVFGQD--IFAGLEFAGDYTSSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCWG 266

Query: 244 THGQLG-HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSN 298
              +LG H D  D  P   S+ P + +  V+QIAAG  Y  ML     G+ VYS G G  
Sbjct: 267 HDARLGHHSDPTDLEPRLLSVPPKDAL--VMQIAAGNCYLLMLVYQPTGMSVYSVGCGEG 324

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG-KGYCGALGH 357
             LGHG       PR IQ F+   +  V VSAG  H   L S G V+TWG     G LGH
Sbjct: 325 GKLGHGCTISLTIPRMIQQFKTLKVKPVSVSAGAFHCAVLASDGRVFTWGWDSDTGCLGH 384

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQGLSVLAEVCPTIVQED 395
            D+ +   LP  ++ L S   V+   +    C T V  D
Sbjct: 385 DDKQEYVVLPTAVAGLGS---VKATYISTGYCSTFVVTD 420



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 88/214 (41%), Gaps = 25/214 (11%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-AAHVVQV 168
           MQI  G  + L++    +  SV+S G    G LGHG   +  +      F +     V V
Sbjct: 295 MQIAAGNCYLLMLVYQPTGMSVYSVGCGEGGKLGHGCTISLTIPRMIQQFKTLKVKPVSV 354

Query: 169 SASENHAAFVLQSGQVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           SA   H A +   G+VFT G D+ + C GH D    +  P  V  L  V    ++ G   
Sbjct: 355 SAGAFHCAVLASDGRVFTWGWDSDTGCLGHDDKQEYVVLPTAVAGLGSVKATYISTGYCS 414

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEV--GSVVQIAAGPSY--- 280
           T  +T  G V++ G +    LG    +  D   PK  A L       VVQI+A  ++   
Sbjct: 415 TFVVTDNGDVYSFGCDHSRNLGVKADVGEDVRIPKLAANLNVSLNEKVVQISATNTWDWP 474

Query: 281 ------------MLAVTGNGVVYSFGSGSNFCLG 302
                          +T +G +YS G GS   LG
Sbjct: 475 SRSQNRITSECHTCVLTESGRLYSLGRGSEGQLG 508


>gi|229576492|gb|ACQ82636.1| At3g15430-like protein [Solanum quitoense]
 gi|229576494|gb|ACQ82637.1| At3g15430-like protein [Solanum quitoense]
          Length = 91

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|229576490|gb|ACQ82635.1| At3g15430-like protein [Solanum hirtum]
          Length = 90

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 1   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 60

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 61  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 90


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 19/294 (6%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLC 139
           L   +  WK V R   S+          AG +   +T G YHT  +S+  ++F+ G  + 
Sbjct: 39  LGHGDNGWKYVPRLTHSL----------AGQVITHVTCGSYHTAAVSSKGNLFTWGGGMY 88

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G LGHG E+       R++      VV ++    H A V   G ++T GD  +   GH D
Sbjct: 89  GKLGHGNESGHSTP-KRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGD 147

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T    + P+L+E L G    Q++A    TG LT  G V+T G    G+LGHG   +  +P
Sbjct: 148 TEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSP 207

Query: 260 KSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           + +  L  +G   VQI+ G  +   VT +G +Y+FG G +  LGHG++ ++++P  ++  
Sbjct: 208 RLVETL--LGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDL 265

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              G+ + +++ G  H VAL SS  VYTWG G  G LGHG     + P+ +  L
Sbjct: 266 --DGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKL 317



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 5/199 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G V+T G       GH D N   + PRL  +L G     VT G   T  ++ +G++ T G
Sbjct: 26  GGVYTWGRGDDGRLGHGD-NGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWG 84

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
              +G+LGHG+     TPK +  L  + +VV IA G  +   VT  G +Y++G   N   
Sbjct: 85  GGMYGKLGHGNESGHSTPKRVDSLVGL-AVVDIACGSRHTAIVTSRGCLYTWGDKENGVA 143

Query: 302 GHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           GHG+ +  +  P+ ++  R  G  VV++SA   H   L  +G VYTWG+G  G LGHG E
Sbjct: 144 GHGDTEGHQYTPKLLE--RLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAE 201

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            +   P  + +L     VQ
Sbjct: 202 RNCHSPRLVETLLGKRPVQ 220



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 8/251 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 189
           V++ G    G LGHG    + V   R+    A  V+  V+    H A V   G +FT G 
Sbjct: 28  VYTWGRGDDGRLGHGDNGWKYVP--RLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGG 85

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH + +     P+ V++L G+    +  G   T  +T RG ++T G   +G  G
Sbjct: 86  GMYGKLGHGNESGHS-TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAG 144

Query: 250 HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           HGDT   + TPK +  L     VVQ++A   +   +T  G VY++G G    LGHG + +
Sbjct: 145 HGDTEGHQYTPKLLERLSGK-RVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERN 203

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              PR ++T    G   V++S G  H   + + G +YT+G G  G LGHGD+++K  P  
Sbjct: 204 CHSPRLVETLL--GKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTL 261

Query: 369 LSSLKSHLAVQ 379
           +  L      Q
Sbjct: 262 VKDLDGVFLTQ 272



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 8/104 (7%)

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VY++G G +  LGHG+   +  PR   +    G  +  V+ G  H  A+ S G +
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNL 80

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           +TWG G  G LGHG+E   + P+ + SL       GL+V+   C
Sbjct: 81  FTWGGGMYGKLGHGNESGHSTPKRVDSL------VGLAVVDIAC 118


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 131/254 (51%), Gaps = 6/254 (2%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
           Q++ G  HT +L+ N  VF+ G    G LG G   T  VS    ++     HV QV+   
Sbjct: 43  QVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGW 102

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H   ++ +GQ++T G       GH D  R    P+LVE+L+G     V AG   +  + 
Sbjct: 103 HHTCALIDNGQLYTWGSGEYGRLGHGDEVRQA-SPKLVESLQGKEVTFVAAGGFHSSVII 161

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G++ T G    GQLGHGD  DR TPK +  +++     ++A G  + L +T +  V++
Sbjct: 162 EGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQC-IAHEVACGTHHTLMLTQSQEVWT 220

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GSG    LG G++    +P  I     +G+ V+ +S G  H  AL S G +YTWG G  
Sbjct: 221 WGSGEFGKLGIGDEEKHAEPIMITAL--QGVGVIHISTGGFHSAALTSEGVLYTWGGGDK 278

Query: 353 GALGHGDEIDKTLP 366
           G LGHGDE  + +P
Sbjct: 279 GQLGHGDENSQNIP 292



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 15/251 (5%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           S V+S G  + G LGHG E TQ      V+F   N      V QVS    H A ++++G+
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFN------VRQVSCGNQHTAILMENGE 59

Query: 184 VFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           VFT G  +    G        +  P LV AL+G   KQV  G + T  L   G ++T GS
Sbjct: 60  VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGS 119

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             +G+LGHGD + + +PK +  L+    V  +AAG  +   +   G + ++G G    LG
Sbjct: 120 GEYGRLGHGDEVRQASPKLVESLQGK-EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG++ D   P+ ++  ++   H   V+ G  H + L  S  V+TWG G  G LG GDE  
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAH--EVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEK 236

Query: 363 KTLPEPLSSLK 373
              P  +++L+
Sbjct: 237 HAEPIMITALQ 247



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 6/197 (3%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V++ G       GH D  +   +PRLV A  G   +QV+ G   T  L   G V T G 
Sbjct: 7   EVYSWGQGVLGQLGHGD-EKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGR 65

Query: 243 NTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
              GQLG G   T +  TP  ++ L+    V Q+A G  +  A+  NG +Y++GSG    
Sbjct: 66  GNFGQLGQGASVTANVSTPALVSALQGK-HVKQVACGWHHTCALIDNGQLYTWGSGEYGR 124

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG++  +  P+ +++ + K   V  V+AG  H   +   G + TWG GY G LGHGDE
Sbjct: 125 LGHGDEVRQASPKLVESLQGK--EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDE 182

Query: 361 IDKTLPEPLSSLKSHLA 377
            D+  P+ +  ++  +A
Sbjct: 183 TDRKTPKMVKGVQQCIA 199


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 143/274 (52%), Gaps = 9/274 (3%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S G ++I TGR H + +S N  V+  G+S  G  G G +  Q +   R+ F     +V V
Sbjct: 139 SLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPI-RMEFFRDKSIVDV 197

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S   +H+A V + G+V+T G       GH  T   + +P+ +  ++G    +VT G +FT
Sbjct: 198 SCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDEL-KPKELTVIRGEGISRVTCGTDFT 256

Query: 229 GFLT-IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           G L    G + T G+   GQLGHG+      P S+ PL+   +V ++AAG ++MLA+T +
Sbjct: 257 GLLNETEGRLFTFGNGEAGQLGHGERGLCLEP-SVVPLD---NVKEVAAGGAHMLALTKD 312

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G  +S+G G +  LGHG   D L+P  I T     + VV VSAG  H +AL  SG VY W
Sbjct: 313 GQAWSWGWGEDGRLGHGATEDFLKPEPIPTLG-PAVGVVSVSAGGGHSLALTESGQVYGW 371

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G    G LG G+E     P  + +L     ++ +
Sbjct: 372 GFNASGRLGLGNESSVMTPTLIKALADKRVLRAI 405



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 26/294 (8%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +Q +   +  ++ +AG  Q      + LL +   ++  GSS  GV    P         R
Sbjct: 80  VQELPVGASYIDAAAGWTQ------NFLLTTRHELYYWGSS--GVYALLPMRRD----KR 127

Query: 157 INFPS------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           I +P+      +  +V++     H   + ++G+V+  G NS F             P  +
Sbjct: 128 IYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWG-NSEFGQTGLGNKEAQHLPIRM 186

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           E  +      V+ GL+ +  ++  G V T G    GQLGH  T D   PK +  +   G 
Sbjct: 187 EFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEG- 245

Query: 271 VVQIAAGPSYM-LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           + ++  G  +  L     G +++FG+G    LGHGE+   L+P  +        +V  V+
Sbjct: 246 ISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL-----DNVKEVA 300

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           AG  H++AL   G  ++WG G  G LGHG   D   PEP+ +L   + V  +S 
Sbjct: 301 AGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSA 354



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+TCG+  + QLG GD  D   P  +  L    S +  AAG +    +T    +Y +GS 
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 297 SNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             + L    +   +  P   +  +  GI  V++  G +H +AL  +G VY WG    G  
Sbjct: 115 GVYALLPMRRDKRIYYPTLCEPAQSLGI--VKIRTGRQHGIALSKNGEVYIWGNSEFGQT 172

Query: 356 GHGDEIDKTLP 366
           G G++  + LP
Sbjct: 173 GLGNKEAQHLP 183


>gi|229576496|gb|ACQ82638.1| At3g15430-like protein [Solanum hirtum]
          Length = 91

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 72/90 (80%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLC    IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCXXSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNXNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 15/298 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   +  WK V R ++ +              Q+T G YHT  ++ S  +++ G  + G 
Sbjct: 66  LGHGDNGWKFVPRLVEDLRDKK--------VRQVTCGSYHTAAVTVSGELYTWGGGMYGK 117

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E       + +      +V QV+    H   +L++  V+T GD  +   GH DT+
Sbjct: 118 LGHGNENGHSTP-SLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTS 176

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + P  V  L  +  KQ++A    T  L+  G V T G    G+LGH    ++P  K 
Sbjct: 177 GHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKC 236

Query: 262 IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           I  L  +G  + Q+A G  +  AVT +G V+++G G +  LGHG++ +++ P  +++   
Sbjct: 237 IDAL--IGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLID 294

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           K I  ++++ G  H VAL   G V+TWG G  G LGH D    T P+ + +  S   +
Sbjct: 295 KNI--IQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVI 350



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HT+ L+ N  V++ G    GV GHG  +    S   ++     ++ Q+SA   
Sbjct: 142 QVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGF 201

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A + ++GQVFT G+      GH  + N+P+   + ++AL G   KQV  G   T  +T
Sbjct: 202 HTAALSENGQVFTFGEGKFGRLGHNSERNQPV--AKCIDALIGKRIKQVACGGFHTAAVT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             GHV T G   HGQLGHGD +++  P  +  L +  +++Q+  G S+ +A+T  G V++
Sbjct: 260 ESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLID-KNIIQLTCGWSHTVALTDKGEVFT 318

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G+G +  LGH + +   +P+ I+TF  K   V+ V++ +EH VAL
Sbjct: 319 WGNGDHGKLGHNDTNKVTEPKLIETFNSK--RVISVASYNEHTVAL 362



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V++ G    G LG G  + Q      +        VQ+S    H   +   G+V+T G 
Sbjct: 2   TVYTWGRGEDGQLGLGDTSDQYHPIL-VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+    +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 308
           HG+     TP  +  ++ +  V Q+A G  + + +  N  VY++G   N   GHG+    
Sbjct: 120 HGNENGHSTPSLVESIKGL-YVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGH 178

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           +  P  +       I++ ++SA   H  AL  +G V+T+G+G  G LGH  E ++ + + 
Sbjct: 179 QYSPYCVSELVE--INIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKC 236

Query: 369 LSSL 372
           + +L
Sbjct: 237 IDAL 240



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 3/137 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+T G    GQLG GDT D+  P  +  L++    VQI+ G  + + +T +G VY++G G
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQDR-QTVQISCGSGHTVVLTDDGKVYTWGRG 61

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            +  LGHG+   +  PR ++  R K   V +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEDLRDK--KVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 357 HGDEIDKTLPEPLSSLK 373
           HG+E   + P  + S+K
Sbjct: 120 HGNENGHSTPSLVESIK 136


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 142/293 (48%), Gaps = 13/293 (4%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   + +WK V   + ++        T     Q+T G YHT  IS++ ++++ G  + G 
Sbjct: 71  LGHADNHWKYVPHLVSAL--------TGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E        R+       V Q++    H A +L  G+V+  GD  +  CG  +  
Sbjct: 123 LGHGNEVGHPAP-CRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAA 181

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + P+ +EALKGV   Q+ A    T  +T  G + + G    G+LG G+  ++ TP  
Sbjct: 182 EHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCC 241

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L+ V  V Q+A G  +   VT +G V +FG G +  LGHG++ +   P  ++     
Sbjct: 242 VEGLQGV-RVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGA 300

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           GI  V+V+ G  H V L   G V+T+G G  G LGHG      LP+ + SL +
Sbjct: 301 GI--VQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLAN 351



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 10/242 (4%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S ++S G    G  G+G    Q +            VVQ++    H   + +   V++ 
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLT-VVQIACGSGHTVVLTEDKDVWSW 63

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G       GH D N   + P LV AL G   KQVT G   T  ++  G + T G   +G+
Sbjct: 64  GRGDDGRLGHAD-NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE- 305
           LGHG+ +  P P  +     +G  V QIA G  +  A+   G VY +G   N   G GE 
Sbjct: 123 LGHGNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEA 180

Query: 306 -QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            +H  L P+ ++    KG+ + +++A   H  A+   G +++WG+G  G LG G+E ++ 
Sbjct: 181 AEHQYL-PKKLEAL--KGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQV 237

Query: 365 LP 366
            P
Sbjct: 238 TP 239



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 9/269 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  HT++++ +  V+S G    G LGH     + V    ++  +   + QV+   
Sbjct: 42  VQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHL-VSALTGKSIKQVTCGS 100

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A +  +G ++T G       GH  +   P   P  VEA  G   +Q+  G   T  L
Sbjct: 101 YHTAAISDTGALWTWGGGMYGKLGHGNEVGHPA--PCRVEAFIGREVEQIACGSRHTAAL 158

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
              G V+  G   +G  G G+  + +  PK +  L+ V  + QIAA   +  A+T +G +
Sbjct: 159 LAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGV-KITQIAACGFHTAAITQDGAL 217

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G + +++ P  ++    +G+ V +V+ G  H   +   G V T+G G
Sbjct: 218 WSWGEGKFGRLGQGNEKNQVTPCCVEGL--QGVRVKQVACGGFHSACVTEDGDVLTFGGG 275

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G LGHGD+ ++T+P  + +L+    VQ
Sbjct: 276 EHGQLGHGDKTNRTVPCLVKALEGAGIVQ 304



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 5/191 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++ G      CG+  TN     P  VE LK +   Q+  G   T  LT    V + G  
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             G+LGH D   +  P  ++ L    S+ Q+  G  +  A++  G ++++G G    LGH
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGK-SIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID- 362
           G +     P  ++ F   G  V +++ G  H  AL + G VY WG    G  G G+  + 
Sbjct: 126 GNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEH 183

Query: 363 KTLPEPLSSLK 373
           + LP+ L +LK
Sbjct: 184 QYLPKKLEALK 194



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           + ++YS+G G +   G+G  +D+  P  ++  +   + VV+++ G  H V L     V++
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKH--LTVVQIACGSGHTVVLTEDKDVWS 62

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
           WG+G  G LGH D   K +P  +S+L
Sbjct: 63  WGRGDDGRLGHADNHWKYVPHLVSAL 88


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 15/289 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGV 141
           L   +  WK V R  QS+  +  IV      +Q+T G YHT  ++ N  +++ G  + G 
Sbjct: 65  LGHGDNGWKYVPRMTQSL--AGQIV------LQVTCGSYHTAAVTGNGDLYTWGGGMYGK 116

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E        R+     A V Q++    H A V  SG ++T GD  +   GH +T 
Sbjct: 117 LGHGDEAGHATP-KRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETE 175

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + PRL+E++      Q++A    T  +T  G + T G    G+LGH    +  +P  
Sbjct: 176 GHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTI 235

Query: 262 IAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  +  VG    Q++ G  +   V+ +G +Y+FG G +  LGH ++ +++ P  ++    
Sbjct: 236 VDYM--VGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEAL-- 291

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            G+ V +++ G  H VAL   G VYTWG G  G LGHG+     +P+ +
Sbjct: 292 DGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 97/198 (48%), Gaps = 7/198 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VFT G       G  DT+     P  V+AL+GV  +Q+  G   T  LT  G V T G  
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQD-EPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             G+LGHGD   +  P+    L   G +V Q+  G  +  AVTGNG +Y++G G    LG
Sbjct: 61  DDGRLGHGDNGWKYVPRMTQSL--AGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EI 361
           HG++     P+ ++     G  V +++ G  H   + +SG +YTWG    G  GHG+ E 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 362 DKTLPEPLSSLKSHLAVQ 379
            + LP  L S+ +    Q
Sbjct: 177 HQYLPRLLESMAAKRVAQ 194



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 123/302 (40%), Gaps = 56/302 (18%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +VF+ G    G LG G +T+     T ++      V Q++    H   +   G+VFT G 
Sbjct: 1   AVFTWGRGEDGQLGLG-DTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   + PR+ ++L G    QVT G   T  +T  G ++T G   +G+LG
Sbjct: 60  GDDGRLGHGD-NGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 250 HGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QH 307
           HGD     TPK +  L  VG +V QIA G  +   VT +G +Y++G   N   GHGE + 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 308 DELQPRAIQTFRRK--------GIHVV--------------------------------- 326
            +  PR +++   K        G H                                   
Sbjct: 177 HQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIV 236

Query: 327 ---------RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
                    +VS G  H   +   G +YT+G G  G LGH D ++K  P  + +L     
Sbjct: 237 DYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFV 296

Query: 378 VQ 379
            Q
Sbjct: 297 SQ 298


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 128/246 (52%), Gaps = 9/246 (3%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++  GS++ G LG G  E  Q  +     F  A++V QV+  ENH   + +SG+VF+CG+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH+       +P  VE L      +++ G N T      G +   GS++HGQLG
Sbjct: 61  NDLDQLGHKKQRT---KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLG 117

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 308
              T  +P PK I  L     +VQI+ G ++ LA+T NG +YS+G   +  LG G + + 
Sbjct: 118 FNGT-TQPLPKIIKSLATF-HIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEY 175

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           E QP  I++    GI +  ++ G  H  AL  SG +Y WGK   G LG  DE +K  P  
Sbjct: 176 EKQPTLIKSLL--GIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQ 233

Query: 369 LSSLKS 374
           L +L+S
Sbjct: 234 LKTLRS 239



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 10/267 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+T G  HT++++ S  VFSCG++    LGH  + T+      ++F     + ++S   N
Sbjct: 38  QVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTKPEKVEGLDF---YRITKISCGGN 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + GQ+F  G +S    G   T +P+  P+++++L      Q++ G N +  LT 
Sbjct: 95  HTLAFNEWGQLFGWGSDSHGQLGFNGTTQPL--PKIIKSLATFHIVQISCGKNHSLALTN 152

Query: 234 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G +++ G N  GQLG G   +    P  I  L  +  +  IA G ++  A++ +G +Y 
Sbjct: 153 NGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGI-PIAFIACGSNHSFALSKSGAIYG 211

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  +   LG  ++ ++L P  ++T R   I V  ++ G++    L + G V+T G G  
Sbjct: 212 WGKNTYGQLGLNDEENKLHPTQLKTLR--SIRVKYIACGEDFSAFLSADGGVFTCGAGMY 269

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G LGHG   ++ LP  +  L      Q
Sbjct: 270 GQLGHGSTSNEILPRKIMELMGSTVTQ 296



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G+ H+L L +N  ++S G +  G LG G  +      T I       +  ++   
Sbjct: 138 VQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGS 197

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  + +SG ++  G N+    G  D    +  P  ++ L+ +  K +  G +F+ FL+
Sbjct: 198 NHSFALSKSGAIYGWGKNTYGQLGLNDEENKL-HPTQLKTLRSIRVKYIACGEDFSAFLS 256

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+  +GQLGHG T +   P+ I  +E +GS V Q++ G  + LA V   G V
Sbjct: 257 ADGGVFTCGAGMYGQLGHGSTSNEILPRKI--MELMGSTVTQVSCGKRHTLALVPSRGRV 314

Query: 291 YSF 293
           YSF
Sbjct: 315 YSF 317


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 141/298 (47%), Gaps = 27/298 (9%)

Query: 113 NMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHV 165
           NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHV 419

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGV 478

Query: 226 NFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
             T  +               G + T G    G+LGHGD   R  P  +A L E  +  Q
Sbjct: 479 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQ 537

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           IA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  
Sbjct: 538 IACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAY 595

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLSVLAEVC 388
           HV  L S   VYTWGKG  G LGHGD  D++ P  + +LK       V G++  A +C
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAIC 653



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 21/239 (8%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 297 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 354

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 355 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 415 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 471

Query: 326 VRVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           VR + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAAL 530



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D P PK I  L 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G+G++    LGHG +     P+ +     +GIH
Sbjct: 361 NM-NIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLEGIH 418

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 419 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK 467



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G   T+ ++ S  V++ GS + G LG+ P+    +            V ++S    
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAY 595

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAAICI 654

Query: 234 RGHV 237
              V
Sbjct: 655 HKWV 658


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 176/373 (47%), Gaps = 21/373 (5%)

Query: 17  LIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSR 76
           ++  +L+S  L   DLA LE T K F       P    SL +LAA  +C   +++  M  
Sbjct: 60  VLLRVLSSCELDPKDLAALEATCKFFRDPANFPPDLALSLPELAAFDMCQERAMFKPMKP 119

Query: 77  NVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCG 135
             +  L  RC G+WK VLR++   E +    ++     Q+  G  H+++++    V+S G
Sbjct: 120 KEKEWLKQRCGGSWKLVLRYILVGEKNYRREKS-----QVIAGPGHSIVVTAKGDVYSFG 174

Query: 136 SSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG-DNS 191
            +  G LG G    +   C+    I+      + Q +        V  +G V+T G D  
Sbjct: 175 VNCSGQLGLGDRENKFKPCL----ISSLQGIRITQAAVGLRRTMLVSDTGSVYTFGLDTF 230

Query: 192 SFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +   +  +N   +  P+L+E+LKGV   Q + G  F+  L+  G V+T       +LGH
Sbjct: 231 GWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAERLGH 290

Query: 251 GDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV---VYSFGSGSNFCLGHGEQ 306
              L    P+ ++ PL++V  V QIAAG  Y+L ++ +     VYS G G    LGHG +
Sbjct: 291 SSELSDVEPRLLSGPLDDV-LVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGHGNK 349

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 365
             E  P+ I  F+   I  + +SAG  H   +   G V+TWG    G LGHGD  D  TL
Sbjct: 350 DFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTL 409

Query: 366 PEPLSSLKSHLAV 378
           P  +  L +  AV
Sbjct: 410 PRAVEGLNNVKAV 422



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           + +SA   HAA + + G+VFT G NSS C GH D+   +  PR VE L  V    V+AG 
Sbjct: 369 MSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNVKAVHVSAGE 428

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGD----TLDRPTPKSIAPLEEVGS-VVQI------ 274
             T  +   G V++ G      LG  D      D   PK    L ++    VQI      
Sbjct: 429 WCTFVVADNGDVYSFGFRGSHNLGFQDNDAENEDVLPPKPATLLADLNERFVQISPTSAY 488

Query: 275 ----AAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
               A  P + +A+  +G+VY+FG GS   LG
Sbjct: 489 NWNNAEQPHHTVALAESGIVYAFGGGSMGQLG 520



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 17/165 (10%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPS 279
           ++AG      +   G V T G N+ G LGHGD+ D  T P+++  L  V   V ++AG  
Sbjct: 371 ISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNV-KAVHVSAGEW 429

Query: 280 YMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRA---IQTFRRKGIHVVRVSAGD 332
               V  NG VYSFG   +  LG      E  D L P+    +     + + +   SA +
Sbjct: 430 CTFVVADNGDVYSFGFRGSHNLGFQDNDAENEDVLPPKPATLLADLNERFVQISPTSAYN 489

Query: 333 -------EHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPL 369
                   H VAL  SG VY +G G  G LG    E  + +P P+
Sbjct: 490 WNNAEQPHHTVALAESGIVYAFGGGSMGQLGVKLVEGKEAMPTPV 534


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 141/298 (47%), Gaps = 27/298 (9%)

Query: 113 NMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHV 165
           NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV
Sbjct: 406 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHV 464

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+
Sbjct: 465 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGV 523

Query: 226 NFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
             T  +               G + T G    G+LGHGD   R  P  +A L E  +  Q
Sbjct: 524 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQ 582

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           IA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  
Sbjct: 583 IACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAY 640

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLSVLAEVC 388
           HV  L S   VYTWGKG  G LGHGD  D++ P  + SLK       V G++  A +C
Sbjct: 641 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAIC 698



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 21/238 (8%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 343 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 400

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 401 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 460

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 461 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 517

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 518 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAAL 575



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D P PK I  L 
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G+G++    LGHG +     P+ +     +GIH
Sbjct: 406 NM-NIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLEGIH 463

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 464 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK 512



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 582 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVE+LK    + V  G+NFT  
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVESLKDKQVRTVVCGINFTAA 696

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 697 ICIHKWV 703


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 141/298 (47%), Gaps = 27/298 (9%)

Query: 113 NMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHV 165
           NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHV 419

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGV 478

Query: 226 NFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
             T  +               G + T G    G+LGHGD   R  P  +A L E  +  Q
Sbjct: 479 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQ 537

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           IA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  
Sbjct: 538 IACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAY 595

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLSVLAEVC 388
           HV  L S   VYTWGKG  G LGHGD  D++ P  + +LK       V G++  A +C
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAIC 653



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 21/238 (8%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 298 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 355

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 416 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 472

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 473 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAAL 530



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D P PK I  L 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G+G++    LGHG +     P+ +     +GIH
Sbjct: 361 NM-NIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLEGIH 418

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 419 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK 467



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAA 651

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 652 ICIHKWV 658


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 141/298 (47%), Gaps = 27/298 (9%)

Query: 113 NMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHV 165
           NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV
Sbjct: 407 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHV 465

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+
Sbjct: 466 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGV 524

Query: 226 NFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
             T  +               G + T G    G+LGHGD   R  P  +A L E  +  Q
Sbjct: 525 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQ 583

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           IA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  
Sbjct: 584 IACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAY 641

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLSVLAEVC 388
           HV  L S   VYTWGKG  G LGHGD  D++ P  + +LK       V G++  A +C
Sbjct: 642 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAIC 699



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 21/239 (8%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 343 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 400

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 401 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 460

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 461 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 517

Query: 326 VRVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           VR + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 518 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAAL 576



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D P PK I  L 
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G+G++    LGHG +     P+ +     +GIH
Sbjct: 407 NM-NIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLEGIH 464

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 465 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK 513



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 583 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 638

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAA 697

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 698 ICIHKWV 704


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 8/267 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           ++ G  H++ L+S+ +V S G    G LGHG    + V    +  + P  A VV +  ++
Sbjct: 25  VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV-ICGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+  +  Q+++ G       GH +++  +F P+ +EAL+G+  KQ+  G +    +T
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHGNSSD-VFHPQPIEALQGIKIKQIACGDSHCLAVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  A+  +G +Y 
Sbjct: 143 DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGV-CVKMIAAGAEHTAAILEDGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG G+++D L P  + +   +G  +V V+ G  H V + SSG +YT+G    
Sbjct: 202 WGWGQYGNLGLGDRNDRLVPEKVSSV--EGEKMVLVACGWRHTVTVSSSGDLYTYGWSKY 259

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G LGHGD  D  +P  L +LK     Q
Sbjct: 260 GQLGHGDFEDHLVPHKLEALKDRFISQ 286



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 8/217 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK--GVPCKQV 221
           V  VSA  NH+  +L S  V + G       GH D  +RP+  P L+      G+    +
Sbjct: 22  VALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVI 79

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               + T +   +  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 80  CGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGI-KIKQIACGDSHC 138

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V+S+G   N  LG G   D L P+ I  F  +G+ V  ++AG EH  A+   
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAF--EGVCVKMIAAGAEHTAAILED 196

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G +Y WG G  G LG GD  D+ +PE +SS++    V
Sbjct: 197 GDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMV 233



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++++  V S G +  G LG G  T   +   +I+      V  ++A   
Sbjct: 130 QIACGDSHCLAVTDAGQVHSWGRNQNGQLGLG-NTEDSLLPQKIHAFEGVCVKMIAAGAE 188

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +L+ G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 189 HTAAILEDGDLYGWGWGQYGNLGLGDRNDRLV-PEKVSSVEGEKMVLVACGWRHTVTVSS 247

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L++   + QIA G  + +AV G+G +Y +
Sbjct: 248 SGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDR-FISQIAGGWRHTMAVAGDGKLYGW 306

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G  +  D   P  +Q        V +V+ G  H +AL  +  V++WG+G  G
Sbjct: 307 GWNKFGQVGVADNVDHCSP--VQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSG 364

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGHG+ ID+  P+ + +L
Sbjct: 365 QLGHGEIIDRNTPKMIDAL 383



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVP-EKVSSVEGEKMVLVACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q+  G   T  +   
Sbjct: 242 TVTVSSSGDLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDRFISQIAGGWRHTMAVAGD 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G  D +D  +P + I P E+   V Q+A G  + LA+T N  V+S+
Sbjct: 301 GKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQ--KVAQVACGWRHTLALTENKNVFSW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGTSGQLGHGEIIDRNTPKMIDALSLDG 387



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +V  ++AG ++ +A+  +  V S+G G +  LGHG+  D   P  +  F   GI  V + 
Sbjct: 21  TVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVIC 80

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             D      D    +Y+WG G  G LGHG+  D   P+P+ +L+
Sbjct: 81  GADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQ 124


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 5/267 (1%)

Query: 130 SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  GS++ G LG  G E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 249 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 368 PLSSLKSHLAVQGLSVLAEVCPTIVQE 394
            L +L+S L V+ +S   +    + QE
Sbjct: 240 QLKTLRS-LGVRYISCGDDFSVFLTQE 265



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 6/181 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H L ++NS  +F+ G++  G LG G    +  + T +   +   +  ++   
Sbjct: 145 VQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGG 204

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D +   + P  ++ L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY-PTQLKTLRSLGVRYISCGDDFSVFLT 263

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG  T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G V
Sbjct: 264 QEGGVFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321

Query: 291 Y 291
           Y
Sbjct: 322 Y 322


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 15/287 (5%)

Query: 95  RFLQSVEHSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQC 151
           R  +SV+H   I ET A    + I  G+  T  ++++  V++ G S  G LG G      
Sbjct: 536 RSEESVKHPKRI-ETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLA 594

Query: 152 VSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           +   ++    ++HVV Q+S   NHAA      + F  G N+    G    +  +  P  +
Sbjct: 595 IVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEI 654

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-----TLDRPTPKSIAPL 265
            +L+    + +  G   T   T  G V +CG   HGQLGHGD      L +  P     +
Sbjct: 655 TSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIV 714

Query: 266 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           E  G   +V+++AG     A+T  G ++++G G  + LGH    +E  PR ++ F +  I
Sbjct: 715 EGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAK--I 772

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPL 369
            VV VS GD H++ALD SG  Y+WG G  G LGHG+  ++ TLP P+
Sbjct: 773 RVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPI 819



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           LQ   VF  GD  +   G++ +      P +V A + V  K    G   T FL+  G V 
Sbjct: 87  LQGSHVFMWGDGENGKLGNQ-SEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVL 145

Query: 239 TCGSNTHGQLGHGD-TLDRPTP-------KSIAPLEEV----GSVVQIAAGPSYMLAVTG 286
           +CGSN +GQLG GD  L R TP       KS+  L+ +     ++V IAAG  + LA+  
Sbjct: 146 SCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G ++S+GSGS   LG G   +   PR + + +     VV ++ G  H  A+ + G V+T
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNS--KVVHIACGAHHTAAITTVGDVWT 263

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLK 373
           WGKG  G LGH    ++  P   +SL+
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLR 290



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 23/292 (7%)

Query: 120 RY--HTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SENHAA 176
           RY    + +  S VF  G    G LG+  E  Q V +    F +   +V+V A  + H  
Sbjct: 79  RYIRENIELQGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNV--LVKVCALGKQHTL 136

Query: 177 FVLQSGQVFTCGDNSSFCCGHRD----TNRPIFRPRLVEALKGVPC--------KQVTAG 224
           F+   G V +CG N     G  D     + P+  P   ++L  +            + AG
Sbjct: 137 FLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAG 196

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L   G + + GS + G+LG G   +  +P+ +A L+    VV IA G  +  A+
Sbjct: 197 YYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQN-SKVVHIACGAHHTAAI 255

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G V+++G G    LGH    +E  PR   + R+ G   +R   GD+H + +  SG +
Sbjct: 256 TTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIR--CGDDHTLVILRSGQL 313

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDT 396
           Y+ G    G LG GD  D+ +P  ++   +   +    + A+ C +I   +T
Sbjct: 314 YSMGANTHGQLGLGDATDRIIPTLVTGFANEKVI---DIDAKGCRSIALTNT 362



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 122/265 (46%), Gaps = 23/265 (8%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQV 168
            + I  GR+H + L S   V S G+   G LG        T Q V       P      ++
Sbjct: 1274 LSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAP-----CKI 1328

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL--N 226
                 H+A +L+SG++   G N     GH DT +    PR+ + L+ +  K  TAGL  N
Sbjct: 1329 LCGGWHSAAILESGKILLWGKNVYGQLGHGDT-KSCSAPRVNQYLR-LEGKVRTAGLGAN 1386

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSI-APLEEVG--SVVQIAAGPSYM 281
             T  + +   V   GSN  GQLG    LD P  T K++   +EE+   ++ Q+AAG  + 
Sbjct: 1387 HTLVVMVANKVFAMGSNIDGQLG----LDDPSRTGKNVPVSIEELNGKNICQVAAGDQHS 1442

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            LA++  G V+S+G      LGH    D+L P  +    +    V  ++ G     A+ + 
Sbjct: 1443 LALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAK 1502

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLP 366
            G V+TWG G  G LGH  ++    P
Sbjct: 1503 GEVFTWGNGESGELGHAPKVLTYAP 1527



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 11/264 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA------HVV 166
            +++  G  H+L  S +  V++ G+   G LG   E   CV       P          ++
Sbjct: 1216 VEVACGCEHSLARSFDGGVYAWGAGDRGQLG-SLENFDCVKINYAFNPQPVLNLKRYFIL 1274

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGL 225
             ++    H   +    QV + G       G  D N     P++V+AL G  PCK +  G 
Sbjct: 1275 SIACGRWHNMTLTSERQVLSWGAGEFGQLG-LDHNLSKGTPQMVKALDGRAPCKILCGGW 1333

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +    L   G +   G N +GQLGHGDT     P+    L   G V     G ++ L V 
Sbjct: 1334 HSAAILE-SGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVM 1392

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
                V++ GS  +  LG  +     +   +      G ++ +V+AGD+H +AL   G V+
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVW 1452

Query: 346  TWGKGYCGALGHGDEIDKTLPEPL 369
            +WG    G LGH    DK  P PL
Sbjct: 1453 SWGGSPFGQLGHETITDKLAPTPL 1476



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 12/251 (4%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +S++    I+++    + I  G YH+L ++++  +FS GS   G LG G +     S   
Sbjct: 175 KSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDAN-AESPRF 233

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +     + VV ++   +H A +   G V+T G       GH+      F PRL  +L+  
Sbjct: 234 VASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEE-FSPRLNASLRKC 292

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             +++  G + T  +   G +++ G+NTHGQLG GD  DR  P  +        V+ I A
Sbjct: 293 GAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE-KVIDIDA 351

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
                +A+T  G V++FG+ +       E H    PR +    +  + ++ V+       
Sbjct: 352 KGCRSIALTNTGKVFAFGNET-------EPHLNRIPRFVAGLPKSDL-IIAVARTAHFDF 403

Query: 337 ALDSSGYVYTW 347
           A+  +G ++ W
Sbjct: 404 AISDTGQLFRW 414



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 19/244 (7%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLGHG------------PETTQCVSFTRINFPSAAHV 165
           G+ HTL +S +  V SCGS++ G LG G            P   + +   +    S  ++
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++A   H+  +  +G++F+ G  S    G   D N     PR V +L+      +  G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE--SPRFVASLQNSKVVHIACG 248

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  +T  G V T G    GQLGH    +  +P+  A L + G+  +I  G  + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGA-QKIRCGDDHTLVI 307

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G +YS G+ ++  LG G+  D + P  +  F  +   V+ + A     +AL ++G V
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE--KVIDIDAKGCRSIALTNTGKV 365

Query: 345 YTWG 348
           + +G
Sbjct: 366 FAFG 369



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 4/177 (2%)

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            G VF  G+++    G R   +    P L+++L       ++A  + + F+T  G ++  G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGL-QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             + HG+LG G     PTP  I  L  V  ++++A G  + LA+T    VY++G G     
Sbjct: 1669 GSEHGRLGLGHMAPAPTPVEIRSLNTV-KIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            G    +D L+P+ + +       ++ V AG  H  AL   G ++ WGK   G LG G
Sbjct: 1728 GVSNTNDVLEPQELSSL--AACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLG 1782



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 126/286 (44%), Gaps = 19/286 (6%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M++  G YH L L     V++ G    G  G    T   +    ++  +A  ++ V A  
Sbjct: 1698 MKVACGTYHCLALTEEKRVYAWGDGKWGNAGV-SNTNDVLEPQELSSLAACSIIGVHAGG 1756

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
             H+A + Q G +F  G NS+   G   T+     P  +  L GV    V+ G N +  L 
Sbjct: 1757 FHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLM 1815

Query: 232  -TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                 ++ TCG N +GQLG GD +DR T  ++  L++   +V  + G ++  AV+  G +
Sbjct: 1816 QVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDR-QIVSASCGAAHTAAVSQYGDL 1874

Query: 291  YSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             ++G+G N  LG   G   D   P  +         +V+V  G E  + +   G +Y   
Sbjct: 1875 ITWGNGRNGQLGLKAGLSKDIENPVQLPAICND--PMVKVVCGQEVTIVVSEKGELYM-- 1930

Query: 349  KGYCGALGHGD------EIDKTLPEPLSSLK-SHLAVQGLSVLAEV 387
             GY   +G G       E D +  E    ++ + +AV  + VLA V
Sbjct: 1931 AGYESTIGLGGNSSRRREFDVSFREVEGLIQPTQIAVGSVHVLALV 1976



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            H++T G   +G+LGHG      TP+ I        +V++A G  + LA + +G VY++G+
Sbjct: 1180 HIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGA 1239

Query: 296  GSNFCLGHGEQHD------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            G    LG  E  D         P+ +   +R    ++ ++ G  H + L S   V +WG 
Sbjct: 1240 GDRGQLGSLENFDCVKINYAFNPQPVLNLKR--YFILSIACGRWHNMTLTSERQVLSWGA 1297

Query: 350  GYCGALGHGDEIDKTLPEPLSSL 372
            G  G LG    + K  P+ + +L
Sbjct: 1298 GEFGQLGLDHNLSKGTPQMVKAL 1320



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 126/326 (38%), Gaps = 65/326 (19%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G  +I  G  HTL+I  S  ++S G++  G LG G  T + +      F +   V+ + A
Sbjct: 293 GAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE-KVIDIDA 351

Query: 171 SENHAAFVLQSGQVFTCGDNSS--------FCCGHRDTNRPIFRPRLV----------EA 212
               +  +  +G+VF  G+ +         F  G   ++  I   R            + 
Sbjct: 352 KGCRSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQL 411

Query: 213 LKGVP-CKQVTAGLNFTGFLTIRGHVHT-CGSN------------THGQLGHGDTLDRPT 258
            +  P   +  +      F  I+G V   CG N            T   +    +    +
Sbjct: 412 FRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSS 471

Query: 259 PKSIAPLEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             S A LE+  S                   VQ+   PS      G+G +Y++G G    
Sbjct: 472 DISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSR----EGDGYIYTYGKGVFGR 527

Query: 301 LGHGEQHDELQ-----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG-- 353
           LGHG ++   +     P+ I+T  +  + VV ++ G +   AL  +G VYTWGK   G  
Sbjct: 528 LGHGVEYTRSEESVKHPKRIETLAK--MSVVFIACGKDSTAALTDTGKVYTWGKSAQGKL 585

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LG G  +   +P+ +  L SH+  Q
Sbjct: 586 GLGSGKPLAIVVPQLVQDLSSHVVCQ 611



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 119  GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            G  HTL++   + VF+ GS++ G LG   P  T       I   +  ++ QV+A + H+ 
Sbjct: 1384 GANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSL 1443

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRG 235
             +   G+V++ G +     GH      +    L+E  K  P  K +  G  F+  ++ +G
Sbjct: 1444 ALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKG 1503

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             V T G+   G+LGH   +    P  I    E   VVQIA G  +M  +
Sbjct: 1504 EVFTWGNGESGELGHAPKVLTYAPSLIKDFSE---VVQIACGFKHMAGI 1549



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 15/149 (10%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPT-----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           G+++T G    G+LGHG    R       PK I  L ++ SVV IA G     A+T  G 
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKM-SVVFIACGKDSTAALTDTGK 573

Query: 290 VYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSGYVYT 346
           VY++G  +     LG G+    + P+ +Q       HVV ++S G  H          + 
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSS---HVVCQISLGRNHAACSTDMHKFFV 630

Query: 347 WGKGYCGALGHGDEIDKTLPEP--LSSLK 373
           WG    G LG    I   +P+P  ++SL+
Sbjct: 631 WGSNTFGQLGI-PHISSYMPDPYEITSLR 658



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 114/328 (34%), Gaps = 64/328 (19%)

Query: 106  IVETSAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVS---FTRINFP 160
            I E +  N+ Q+  G  H+L +S    V+S G S  G LGH   T +        R   P
Sbjct: 1424 IEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIP 1483

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSS-------------------------FCC 195
                V  ++     +A +   G+VFT G+  S                           C
Sbjct: 1484 --PDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIAC 1541

Query: 196  GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI---------------------- 233
            G +     +F+PR+                 F+G +                        
Sbjct: 1542 GFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAF 1601

Query: 234  -------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
                    G V   G +T GQLG        +P  +  L    S+V I+A       VT 
Sbjct: 1602 SASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLAT-SIVHISANSDMSAFVTD 1660

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G +Y  G   +  LG G  H    P  ++      + +++V+ G  H +AL     VY 
Sbjct: 1661 SGSLYVSGGSEHGRLGLG--HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYA 1718

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            WG G  G  G  +  D   P+ LSSL +
Sbjct: 1719 WGDGKWGNAGVSNTNDVLEPQELSSLAA 1746



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            ++  A   Y + + G   +Y++G G N  LGHG       P+ I +F      +V V+ G
Sbjct: 1163 IRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSN-TKIVEVACG 1221

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEID------KTLPEPLSSLKSHL 376
             EH +A    G VY WG G  G LG  +  D         P+P+ +LK + 
Sbjct: 1222 CEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYF 1272


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 141/263 (53%), Gaps = 7/263 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S + V S G    G LGHG +    +S T ++      VV V+   +H
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGADH 79

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     QV++ G       GH +++  +F P+ ++AL G+  KQ+  G +    +T+
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHGLRIKQIACGDSHCLAVTM 138

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y +
Sbjct: 139 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELYGW 197

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G    G
Sbjct: 198 GWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 255

Query: 354 ALGHGDEIDKTLPEPLSSLKSHL 376
            LGHGD  D   P  L +L+ +L
Sbjct: 256 QLGHGDFEDHLTPHKLEALQENL 278



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 113/225 (50%), Gaps = 11/225 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 18  VLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL-SPTYLSALDGHEVVSVTCG 76

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ LA
Sbjct: 77  ADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGL-RIKQIACGDSHCLA 135

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT +G V S+G   N  LG G   D L P+ IQ F  +G+ V  V+AG EH  A+   G 
Sbjct: 136 VTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSVKMVAAGAEHTAAVTEDGE 193

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           +Y WG G  G LG GD  D+ +PE +S+      V+G+ ++   C
Sbjct: 194 LYGWGWGRYGNLGLGDRNDRLVPEKVST------VEGVKMVKVAC 232



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 183

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 184 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 242

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 301

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 302 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 359

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHG+ ID+ +P+ +  L +
Sbjct: 360 QLGHGESIDRNIPKMIEVLSA 380



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 178 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 236

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 295

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 353

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGHGESIDRNIPKMIEVLSADG 382



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 228 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 286

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 287 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 345

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 346 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 383


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 5/267 (1%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 249 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 368 PLSSLKSHLAVQGLSVLAEVCPTIVQE 394
            L +L+S L V+ +S   +    + QE
Sbjct: 240 QLKTLRS-LGVRYISCGDDFSVFLTQE 265



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%)

Query: 102 HSSDIVETSAGNM----------QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ 150
           H  D+V   A  M          QI+ G  H L ++NS  +F+ G++  G LG G    +
Sbjct: 123 HDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKK 182

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
             + T +   +   +  ++   NH+  V +SG +F  G N+    G  D +   + P  +
Sbjct: 183 VPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY-PTQL 241

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           + L+ +  + ++ G +F+ FLT  G V TCG  T GQLGHG   +   P+ +   E +GS
Sbjct: 242 KTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV--FELMGS 299

Query: 271 -VVQIAAGPSYMLA-VTGNGVVY 291
            + QIA G  + LA V   G VY
Sbjct: 300 KITQIACGRKHTLAFVPSRGKVY 322


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 355 VLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 413

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + I  PR VE+LK
Sbjct: 414 RVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGD-RKSISLPREVESLK 472

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 473 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 532

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           + L E  +  Q+A G S  +A T +G VY+ GS     LG+ +   +L  R      R  
Sbjct: 533 SALVEP-NFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSS 591

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +    ++ G  HV  L S   VYTWGKG  G LGHGD  DK LP  + +LK
Sbjct: 592 VE--EIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALK 640



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+EAL     + V  G
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPQLIEALSNTNIEFVACG 375

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 376 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 434

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             V+  G +++FG G+   LGHG++     PR +++   KG+  V+ + G  H  A+   
Sbjct: 435 AVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESL--KGLRTVQAACGVWHTAAVVEV 492

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                     SSG ++TWG G  G LGHGD+  K +P  +S+L
Sbjct: 493 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSAL 535



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 4/175 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   P+ I  L 
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 366 NT-NIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 423

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP  + SLK    VQ
Sbjct: 424 VSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQ 478



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++S++  +F+ G    GVLGHG    + +S  R +        VQ +    
Sbjct: 427 ISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDR--KSISLPREVESLKGLRTVQAACGVW 484

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 485 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVSALVEPNFCQV 543

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T   T  GHV+T GS  +GQLG+  + D   P  +       SV +IA G  ++
Sbjct: 544 ACGHSLTIARTTSGHVYTMGSPVYGQLGNPQS-DGKLPARVEGKLSRSSVEEIACGAYHV 602

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  +
Sbjct: 603 AVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSI 647



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D L
Sbjct: 298 GVKMDSLLPKALESAV-VLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL 356

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE 367
            P+ I+      I  V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P+
Sbjct: 357 HPQLIEALSNTNIEFV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 413



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 122 HTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           H+L I+ ++   V++ GS + G LG+ P++   +        S + V +++    H A +
Sbjct: 547 HSLTIARTTSGHVYTMGSPVYGQLGN-PQSDGKLPARVEGKLSRSSVEEIACGAYHVAVL 605

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
               +V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 606 TSKTEVYTWGKGANGRLGHGDTDDKNL-PSLVEALKDKQVKSIACGTNFTAAICLHKWV 663


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 9/263 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LGHGD  D  +P  L +LK
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALK 283



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 109/218 (50%), Gaps = 7/218 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G +Y WG G  G LG GD  D+ +PE +SS+     V
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV 236



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 307

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      +G G+  D   P  +     +   VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 308 GWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSWGRGT 365

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHG+ +D+ +P+ + +L S
Sbjct: 366 SGQLGHGEIVDRNIPKMIDALSS 388



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 7/253 (2%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDS 139

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +G V + G N +   G  +T   +  P+ ++A +GV  K + AG   T  +T 
Sbjct: 140 HCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIAAGAEHTAAVTE 198

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ +     +V +A G  + + V+ +G +Y++
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ-KMVLVACGWRHTITVSSSGSIYTY 257

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG+  D L P  ++    K   + ++S G  H +AL + G +Y WG    G
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKLEAL--KDTTISQISGGWRHTMALAADGKLYGWGWNKFG 315

Query: 354 ALGHGDEIDKTLP 366
            +G GD  D   P
Sbjct: 316 QVGVGDNEDHCSP 328



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 303

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 361

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 362 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 390



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK---GIHVV 326
           SVV I+AG S+ +A+   GVV S+G G +  LGHG+  D   P  +         G+  V
Sbjct: 21  SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 80

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +   D      D    +Y+WG G  G LGHG+  D   P+P+ +L+
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQ 127



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 296

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 297 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 355

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            +V + G  T GQLGHG+ +DR  PK I  L   GS
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGS 391


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 9/264 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 351 YCGALGHGDEIDKTLPEPLSSLKS 374
             G LGHGD  D  +P  L +LK 
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKD 284



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 109/218 (50%), Gaps = 7/218 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G +Y WG G  G LG GD  D+ +PE +SS+     V
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV 236



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 18/279 (6%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDS 139

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +G V + G N +   G  +T   +  P+ ++A +GV  K + AG   T  +T 
Sbjct: 140 HCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIAAGAEHTAAVTE 198

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ +     +V +A G  + + V+ +G +Y++
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ-KMVLVACGWRHTITVSSSGSIYTY 257

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFR------RKGIHVVRVSAGDEHV-------VALDS 340
           G      LGHG+  D L P  ++  +       + + ++    GDE          AL +
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAA 317

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G +Y WG    G +G GD  D   P  ++       VQ
Sbjct: 318 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQ 356



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 25/278 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--------------- 276
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ Q  A               
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQEEAVELIFFFLGDEGFRV 307

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G     A+  +G +Y +G      +G G+  D   P  +     +   VV+V+ G  H +
Sbjct: 308 GGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTL 365

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           AL  +  V++WG+G  G LGHG+ +D+ +P+ + +L S
Sbjct: 366 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSS 403



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 21/224 (9%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA------GLNFT 228
              V  SG ++T G +     GH D    +  P  +EALK     Q  A       L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQEEAVELIFFFLGDE 303

Query: 229 GF---------LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 278
           GF         L   G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G 
Sbjct: 304 GFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGW 361

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            + LA+T    V+S+G G++  LGHGE  D   P+ I      G
Sbjct: 362 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDG 405



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK---GIHVV 326
           SVV I+AG S+ +A+   GVV S+G G +  LGHG+  D   P  +         G+  V
Sbjct: 21  SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 80

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +   D      D    +Y+WG G  G LGHG+  D   P+P+ +L+
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQ 127



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 71/172 (41%), Gaps = 20/172 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV- 166
           +  G  HT+ +S+S S+++ G S  G LGHG       P   + +  T I+   A  ++ 
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIF 297

Query: 167 --------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                   +V      A  +   G+++  G N     G  D N     P  V        
Sbjct: 298 FFLGDEGFRVGGGIQWA--LAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKV 354

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            QV  G   T  LT   +V + G  T GQLGHG+ +DR  PK I  L   GS
Sbjct: 355 VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGS 406


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 9/263 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 30  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 90  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 148

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 149 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 207

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 208 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 265

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LGHGD  D  +P  L +LK
Sbjct: 266 KYGQLGHGDFEDHLVPHKLEALK 288



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 109/218 (50%), Gaps = 7/218 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 27  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 86

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 87  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 145

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 146 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 203

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G +Y WG G  G LG GD  D+ +PE +SS+     V
Sbjct: 204 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV 241



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 138 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 196

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 253

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 254 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 312

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 313 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 370

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHG+ +D+ +P+ + +L S
Sbjct: 371 SGQLGHGEIVDRNIPKMIDALSS 393



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 7/253 (2%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 86  VICGADHTTAYSDEELQLYSWGWGDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDS 144

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +G V + G N +   G  +T   +  P+ ++A +GV  K + AG   T  +T 
Sbjct: 145 HCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIAAGAEHTAAVTE 203

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ +     +V +A G  + + V+ +G +Y++
Sbjct: 204 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ-KMVLVACGWRHTITVSSSGSIYTY 262

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG+  D L P  ++    K   + ++S G  H +AL + G +Y WG    G
Sbjct: 263 GWSKYGQLGHGDFEDHLVPHKLEAL--KDTTISQISGGWRHTMALAADGKLYGWGWNKFG 320

Query: 354 ALGHGDEIDKTLP 366
            +G GD  D   P
Sbjct: 321 QVGVGDNEDHCSP 333



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 191 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 249

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 250 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 308

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 366

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 367 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 395



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK---GIHVV 326
           SVV I+AG S+ +A+   GVV S+G G +  LGHG+  D   P  +         G+  V
Sbjct: 26  SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 85

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +   D      D    +Y+WG G  G LGHG+  D   P+P+ +L+
Sbjct: 86  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQ 132



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 301

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 302 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 360

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            +V + G  T GQLGHG+ +DR  PK I  L   GS
Sbjct: 361 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGS 396


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 134/252 (53%), Gaps = 9/252 (3%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 184
           +++ ++F  GS++ G LG G    + +   R ++F  A  + Q++  EN+   + + GQV
Sbjct: 73  VTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++CG+N     GH    +   R +L+  L     K+V  G + T  +   G + + GSN 
Sbjct: 133 YSCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNA 189

Query: 245 HGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            GQLG +   L    P  +  L     VVQ+A G +++LA+T NG +YS+GS S+  LG 
Sbjct: 190 EGQLGLNSKNLIECVPHMVRAL-GTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL 248

Query: 304 G-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G +  +E++P+ I +    G+ +  ++ G  H +A+  SG V+ WGK   G LG  D  +
Sbjct: 249 GTDVKNEIKPKLISSL--AGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRN 306

Query: 363 KTLPEPLSSLKS 374
           + LP  L +L++
Sbjct: 307 RNLPRQLQTLQN 318



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 133/273 (48%), Gaps = 9/273 (3%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  G +HTL ++    +FS GS+  G LG +     +CV    +     + VVQV+   
Sbjct: 165 KVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHM-VRALGTSVVVQVACGI 223

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +  +G++++ G NS    G     +   +P+L+ +L GVP   +T G   +  ++
Sbjct: 224 NHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAIS 283

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G NT GQLG  DT +R  P+ +  L+    V   A G  + + +T +G V++
Sbjct: 284 KSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQN-AKVCYAACGEEFSVFLTVDGGVFT 342

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGY 351
            G+G    LGHG   +E+ PR  Q     G  V ++S G  H + L  S G VY WG G 
Sbjct: 343 CGAGMYGQLGHGNTSNEILPR--QVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGG 400

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
            G L  G+ I +++  P       +A  G SV+
Sbjct: 401 AGQL--GNNITRSVATPQVVHGPWVAPNGSSVI 431



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 128/271 (47%), Gaps = 16/271 (5%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVV--QVS 169
           QI  G  +T+LI+ +  V+SCG++  G LGH  G +  Q +       P     V  +V+
Sbjct: 115 QIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLI-------PGLDAFVFKKVA 167

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +H   V + GQ+F+ G N+    G    N     P +V AL      QV  G+N   
Sbjct: 168 CGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227

Query: 230 FLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            LT  G +++ GSN+ GQLG G D  +   PK I+ L  V  +  I  G  + +A++ +G
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGV-PIAFITCGGYHSMAISKSG 286

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  +   LG  +  +   PR +QT +     V   + G+E  V L   G V+T G
Sbjct: 287 AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNA--KVCYAACGEEFSVFLTVDGGVFTCG 344

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G  G LGHG+  ++ LP  +  L      Q
Sbjct: 345 AGMYGQLGHGNTSNEILPRQVMELMGSTVTQ 375


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 9/251 (3%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 305 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDTKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 364 TLPEPLSSLKS 374
            LP  L +L++
Sbjct: 258 NLPCQLQTLQN 268



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 357 HGDEIDKTLPE 367
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 8/245 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+S G    G LG G    Q      ++   +  VVQV+    H   + + G V+T G  
Sbjct: 9   VYSWGRGEDGQLGLGDTNDQDRPVL-VDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRG 67

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH D N   + PR+VEAL+G    Q T G   T  +T +G ++T G   +G+LGH
Sbjct: 68  DDGRLGHGD-NGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGH 126

Query: 251 GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQH 307
           G+    PTP  +  L + G+ V QIA G  + + +T  G VY++G   N  +GH   + H
Sbjct: 127 GNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGH 186

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
             L PR +++ + K   V +V+A   H  AL ++G ++TWG+G  G LGHG E ++ +P 
Sbjct: 187 QYL-PRMLESLQAK--TVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPR 243

Query: 368 PLSSL 372
            + +L
Sbjct: 244 MVEAL 248



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 126/271 (46%), Gaps = 28/271 (10%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   +  WK V R ++++E    +        Q T G YHT  +++   +++ G  + G 
Sbjct: 72  LGHGDNGWKYVPRIVEALEGQRIV--------QATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 142 LGHGPET---TQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
           LGHG E+   T C V   R      A V Q++    H   +   G+V+T GD  +   GH
Sbjct: 124 LGHGNESGHPTPCMVKHLR---DEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGH 180

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            + +   + PR++E+L+     QV A    T  LT  G + T G    G+LGHG   ++ 
Sbjct: 181 TNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQM 240

Query: 258 TPKSIAPL--EEVG--------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
            P+ +  L  + VG        S   + +G  Y      +G VY+FG+G +  LGHG+  
Sbjct: 241 VPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR 300

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               P  +    +  +HVV+V++ +EH  AL
Sbjct: 301 KVSVPTLVAGLVK--MHVVKVASYNEHTAAL 329



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V++ G       G  DTN    RP LV+ALK     QV  G   T  L+  G V+T 
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G    G+LGHGD   +  P+ +  LE    +VQ   G  +  AVT  G +Y++G G    
Sbjct: 65  GRGDDGRLGHGDNGWKYVPRIVEALEGQ-RIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 359
           LGHG +     P  ++  R +G  V +++ G  H V L   G VYTWG    G +GH + 
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNA 183

Query: 360 EIDKTLPEPLSSLKSHLAVQ 379
           +  + LP  L SL++    Q
Sbjct: 184 DGHQYLPRMLESLQAKTVTQ 203



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 22/279 (7%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S G +Q+  G  HT+++S + +V++ G    G LGHG    + V    +       +VQ 
Sbjct: 39  SKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRI-VEALEGQRIVQA 97

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK--GVPCKQVTAGL 225
           +    H A V   G+++T G       GH  ++  P   P +V+ L+  G    Q+  G 
Sbjct: 98  TCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPT--PCMVKHLRDEGARVTQIACGS 155

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             T  LT  G V+T G   +G +GH +    +  P+ +  L+   +V Q+AA   +  A+
Sbjct: 156 RHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQ-AKTVTQVAACGFHTAAL 214

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G ++++G G    LGHG + +++ PR ++     G  V  V+ G  H  A+  SG +
Sbjct: 215 TAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEAL--MGKRVGHVACGGFHSAAILDSGEL 272

Query: 345 YTWGKG-----YC------GALGHGDEIDKTLPEPLSSL 372
           YTWG G     Y       G LGHGD    ++P  ++ L
Sbjct: 273 YTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGL 311



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 7/156 (4%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V++ G    GQLG GDT D+  P  +  L+  G VVQ+A G  + + ++ +G VY+
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKG-VVQVACGSGHTVVLSEDGAVYT 63

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G +  LGHG+   +  PR ++    +G  +V+ + G  H  A+   G +YTWG G  
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPRIVEAL--EGQRIVQATCGSYHTAAVTDKGELYTWGGGMY 121

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G LGHG+E       P   +  HL  +G  V    C
Sbjct: 122 GKLGHGNES----GHPTPCMVKHLRDEGARVTQIAC 153


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 9/251 (3%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 305 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDIKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 364 TLPEPLSSLKS 374
            LP  L +L++
Sbjct: 258 NLPCQLQTLQN 268



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 357 HGDEIDKTLPE 367
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 136/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 406 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KHVNGPLEGIHVSSISCG 464

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 465 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 523

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 524 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP-NFCQVACGHC 582

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 583 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 640

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLSVLAEVC 388
           S   VYTWGKG  G LGHGD  DK  P  + +LK     + V G++  A +C
Sbjct: 641 SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAIC 692



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 19/237 (8%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+
Sbjct: 337 CLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKLI 395

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEE 267
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 396 DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR
Sbjct: 456 I-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTVR 512

Query: 328 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L
Sbjct: 513 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAAL 569



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 399

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 400 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNG-PLEGIH 457

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 458 VSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLK 506



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE  AGN   +         S+  +F+ G    G LGHG +  + 
Sbjct: 509 RTVRAACGVWHTAAVVEVMAGNSSSSN-------CSSGKIFTWGDGDKGRLGHGDKGPKL 561

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 562 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQAD-GMLPVRVEG 619

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            L     ++++ G      LT +  V+T G   +G+LGHGDT D+ TP  +  L++
Sbjct: 620 KLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKD 675



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 576 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNA----QADGMLPVRVEGKLHKNFVEEISC 631

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 632 GAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRIVVCGINFTAA 690

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 691 ICIHKWV 697



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 334 KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 391

Query: 366 PEPLSSLKSHLAVQ 379
           P+ + +L SH+ ++
Sbjct: 392 PKLIDAL-SHMNIE 404


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 138/292 (47%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHGD  D+  P  + +LK       V G++  A +C
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAIC 654



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 21/239 (8%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+
Sbjct: 298 DCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPK 355

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APL 265
           LVEAL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 356 LVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPL 415

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 416 EGI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 472

Query: 326 VRVSAGDEHVVALD------------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           VR + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASL 531



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G V++ G  + G+LGHG   D P PK +  L 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G+G+ NF  LGHG +     P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 420 VSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK 468



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 9/124 (7%)

Query: 251 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLLPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 366
             QP+ ++      I +V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 351 VPQPKLVEALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP 408

Query: 367 EPLS 370
           + L+
Sbjct: 409 KRLN 412



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 234 RGHV 237
              V
Sbjct: 656 HKWV 659


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 131/256 (51%), Gaps = 7/256 (2%)

Query: 114 MQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +Q ++G  H T+L     VF+ GS+    LG G   +   S  R+    A H VVQV+  
Sbjct: 97  LQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACG 156

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +  +GQ++T G N+    G  +   P   P+ V  + G+P  +V AG +    L
Sbjct: 157 SAHTVGLTATGQIYTWGSNNHGQLGLANKT-PQNEPQWVSCISGLPIVRVAAGADHNLVL 215

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI G +   G N+ GQLG GD  DR  P  +  L   G +  +A G  + LA+T +G V+
Sbjct: 216 TISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQG-ICALACGDDHSLALTRDGGVF 274

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+G    LGH   ++EL PR +  F   G  V +++ G +H +A + SSG VY +G G
Sbjct: 275 TFGAGMYGQLGHNTSNNELLPRKV--FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLG 332

Query: 351 YCGALGHGDEIDKTLP 366
             G LG G  +++  P
Sbjct: 333 GNGQLGTGSTVNRMSP 348



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  HTL +  +  V SCG++  G LGH      C     I+     +V+Q S+  
Sbjct: 47  VHIACGLQHTLFVKKDGRVLSCGNNDYGQLGH---EKPCKRPALIDSLGERNVLQASSGT 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  +GQVFT G N     G    +      PR+V  L      QV  G   T  L
Sbjct: 104 KHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGL 163

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++T GSN HGQLG  +   +  P+ ++ +  +  +V++AAG  + L +T +G ++
Sbjct: 164 TATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGL-PIVRVAAGADHNLVLTISGALF 222

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  S   LG G+  D   P  ++T R +GI    ++ GD+H +AL   G V+T+G G 
Sbjct: 223 AWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGI--CALACGDDHSLALTRDGGVFTFGAGM 280

Query: 352 CGALGHGDEIDKTLPEPLSSL 372
            G LGH    ++ LP  +  L
Sbjct: 281 YGQLGHNTSNNELLPRKVFEL 301



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 13/261 (4%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 186
            SSV   GS   G LG G    + V+  R I       VV ++    H  FV + G+V +
Sbjct: 8   KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG+N     GH    +P  RP L+++L      Q ++G   +  LT  G V T GSN   
Sbjct: 68  CGNNDYGQLGHE---KPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDN 124

Query: 247 QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           QLG G  D+     P+ +  L +   VVQ+A G ++ + +T  G +Y++GS ++  LG  
Sbjct: 125 QLGRGQVDSASTSIPRMVRGLAD-HKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLA 183

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            +  + +P+ +      G+ +VRV+AG +H + L  SG ++ WG    G LG GD+ D+ 
Sbjct: 184 NKTPQNEPQWVSCI--SGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241

Query: 365 LPEPLSSLKSHLAVQGLSVLA 385
            P  + +L++    QG+  LA
Sbjct: 242 APTLVKTLRN----QGICALA 258



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           ++  V   GS THGQLG G   +     P+ I     V  VV IA G  + L V  +G V
Sbjct: 7   LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNV-EVVHIACGLQHTLFVKKDGRV 65

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            S G+     LGH +     +P  I +   +  +V++ S+G +H   L  +G V+TWG  
Sbjct: 66  LSCGNNDYGQLGHEKPCK--RPALIDSLGER--NVLQASSGTKHSTVLTDAGQVFTWGSN 121

Query: 351 YCGALGHG--DEIDKTLPEPLSSLKSHLAVQ 379
               LG G  D    ++P  +  L  H  VQ
Sbjct: 122 EDNQLGRGQVDSASTSIPRMVRGLADHKVVQ 152



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  H L+++ S ++F+ G +  G LG G +  +    T +       +  ++  +
Sbjct: 203 VRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAP-TLVKTLRNQGICALACGD 261

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           +H+  + + G VFT G       GH  +N  +  PR V  L G    Q+  G   +  ++
Sbjct: 262 DHSLALTRDGGVFTFGAGMYGQLGHNTSNNELL-PRKVFELMGSSVTQIACGRKHSIAYV 320

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVV 272
              G V+  G   +GQLG G T++R +P  +  P    G+ V
Sbjct: 321 PSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKGPFVAFGAEV 362


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 20/290 (6%)

Query: 99  SVEHSSDIVETSAGNMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   S  N+++   G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 346 NVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 404

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 405 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 463

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 464 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 523

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 524 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKS-- 580

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 581 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 630



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 17/212 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  G   +  +T
Sbjct: 318 HAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCAVT 375

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   VT  G +++
Sbjct: 376 LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFT 435

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------DS 340
           FG G+   LGHG++     PR + +   KG+  VR + G  H  A+             S
Sbjct: 436 FGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 493

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SG ++TWG G    LGHGD+  K +P  +++L
Sbjct: 494 SGKLFTWGDGDKSRLGHGDKEPKLVPTCVAAL 525



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 417 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 475

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 534

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 535 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVEGKLHKSFVEEIACGAYHVA 593

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 594 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 637



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 2/167 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 358 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 415

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK
Sbjct: 416 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLK 462



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V  + 
Sbjct: 309 VQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELV--AC 366

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L   + V  ++
Sbjct: 367 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIA 418


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 137/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+ GHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D  + I  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSISVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHGD  D+  P  + +LK       V G++  A +C
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAIC 654



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 120/238 (50%), Gaps = 21/238 (8%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+L
Sbjct: 299 CLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPKL 356

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G  GHG+ +    PK +  PLE
Sbjct: 357 IDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLE 416

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 417 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESL--KGLRTV 473

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL
Sbjct: 474 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASL 531



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G V++ G  + G+LGHG   D P PK I  L 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NFCL-GHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G+G+ NF L GHG +     P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 420 VSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLK 468



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 251 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLVPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 366
             QP+ I       I +V  + G+ H  A+  SG +YTWG G    G  GHG+E+   +P
Sbjct: 351 VPQPKLIDALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP 408

Query: 367 EPLS 370
           + L+
Sbjct: 409 KRLN 412



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 234 RGHV 237
              V
Sbjct: 656 HKWV 659


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 361 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 419

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  SGQ+FT GD +    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 420 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAV 478

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G S
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHS 537

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D   P  ++    K   V  ++ G  HV  L 
Sbjct: 538 LTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSF-VEEIACGAYHVAVLT 595

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 596 SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 629



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L  +  + V  G
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNINIELVACG 364

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 365 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 423

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 424 AVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEV 481

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                     SSG ++TWG G  G LGHGD+  K +P  +++L
Sbjct: 482 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 524



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 355 NI-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 412

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + SSG ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 413 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK 461



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++++S  +F+ G    GVLGHG    + VS  R +        V+ +    
Sbjct: 416 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVW 473

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 474 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 532

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 533 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGRLSKSFVEEIACGAYHV 591

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 592 AVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 636



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G  LD   PK++     V  V  IA G  +   VT  G V+S+G  S   LGHG   D
Sbjct: 285 GFGVKLDSLLPKALESTV-VLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD 343

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 366
            L P+ I +     I++  V+ G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 344 VLHPKLIDSL--SNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 401

Query: 367 E 367
           +
Sbjct: 402 K 402



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 22/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 464 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 516

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           V     +    NF       QV+   +    +  SG V+T G       G+   +  +  
Sbjct: 517 VPTCVAALVEPNF------CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-- 568

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P  VE  L     +++  G      LT +  V+T G   +G+LGHGDT DR  P  +  L
Sbjct: 569 PNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 628

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  IA G ++  A+
Sbjct: 629 KD-KQVKSIACGTNFTAAI 646



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++    
Sbjct: 531 QVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSFVEEIACGAY 589

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+   F P LVEALK    K +  G NFT  + +
Sbjct: 590 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIACGTNFTAAICL 648

Query: 234 RGHV 237
              V
Sbjct: 649 HKWV 652


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 298

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 299 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 357

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHC 416

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 417 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLYKNF-VEEISCGAYHVAVLT 474

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHGD  DK  P  + +LK       V G++  A +C
Sbjct: 475 SRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAIC 526



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVS 169
           Q+  G   T+ ++ S  V++ GS++ G LG+    G    +       NF     V ++S
Sbjct: 410 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNF-----VEEIS 464

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H A +    +V+T G  ++   GH DT      P LVEALK    + V  G+NFT 
Sbjct: 465 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDK-NTPTLVEALKDKQVRNVVCGINFTA 523

Query: 230 FLTIRGHV 237
            + I   V
Sbjct: 524 AICIHKWV 531


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 136/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S  +++ G S   CG+LG+  E +  V   ++N P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVP-KKLNGPLEGIHVAAVSCG 420

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  SGQ+FT GD +    GH D  R +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RRSVSTPREVESLKGLRTVRAACGVWHTAAV 479

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHS 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G VY+ GS     LG+ +   +L  R      +    V  +  G  HV  L 
Sbjct: 539 MTVALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKN--FVEELDCGAYHVAVLT 596

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHGD  D++ P  + +LK       V G S  A +C
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAIC 648



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 4/171 (2%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDG 353

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 322
           L+   +V  +A G  +  AVT +G +Y++G  S+ C  LG+  +     P+ +     +G
Sbjct: 354 LKNT-NVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNG-PLEG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           IHV  VS G  H   + SSG ++T+G G  G LGHGD    + P  + SLK
Sbjct: 412 IHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLK 462



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 9/120 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  +   VT  G V+S+G      LGHG   D L P+ +     K  +V  V+ 
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGL--KNTNVELVAC 364

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G+ H  A+  SG +YTWG     CG LG+ +E    +P+ L+       ++G+ V A  C
Sbjct: 365 GEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNG-----PLEGIHVAAVSC 419


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 20/290 (6%)

Query: 99  SVEHSSDIVETSAGNMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   +  N+++   G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 385 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 443

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 444 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 502

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 503 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 562

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 563 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 619

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 620 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 669



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 405

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 523

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G    LGHGD+  K +P  +++L
Sbjct: 524 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAAL 564



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 456 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 514

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 573

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 574 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 632

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 633 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 676



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 8/182 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 397 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 454

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK      GL  +  
Sbjct: 455 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLK------GLRTVRA 508

Query: 387 VC 388
            C
Sbjct: 509 AC 510


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 167 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 225

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 226 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 284

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 285 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHC 343

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 344 LTVALTTSGHVYTMGSAVYGQLGN-TQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 401

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHGD  DK  P  + +LK       V G++  A +C
Sbjct: 402 SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC 453



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 19/238 (7%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
            C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L
Sbjct: 97  DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKL 155

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE
Sbjct: 156 IDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLE 215

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 216 GI-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTV 272

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L
Sbjct: 273 RAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAAL 330



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 160

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 161 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG-PLEGIH 218

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 219 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLK 267



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+    TQ      +      H   V ++S 
Sbjct: 337 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----TQADGMLPVRVEGKLHKNFVEEISC 392

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 393 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 451

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 452 ICIHKWV 458



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 95  KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 152

Query: 366 PEPLSSLKSHLAVQ 379
           P+ + +L SH+ ++
Sbjct: 153 PKLIDAL-SHMNIE 165


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 20/290 (6%)

Query: 99  SVEHSSDIVETSAGNMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   +  N+++   G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 351 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 409

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 410 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 468

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 469 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 528

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 529 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 585

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 586 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 635



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 371

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 489

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G    LGHGD+  K +P  +++L
Sbjct: 490 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAAL 530



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 422 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 480

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 539

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 540 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 598

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 599 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 642



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 8/182 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 363 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 420

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK      GL  +  
Sbjct: 421 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLK------GLRTVRA 474

Query: 387 VC 388
            C
Sbjct: 475 AC 476


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ--VSASE 172
           ++ G  H++ L++ + + S G    G LGHG    + V      F +AA  +   +  ++
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGIKIKQIACGDSHCLAVT 145

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y 
Sbjct: 146 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV-CVKMIAAGAEHTAAVTEDGDLYG 204

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG G+++D L P  + +   +G  +V ++ G  H + + SSG +YT+G    
Sbjct: 205 WGWGRYGNLGLGDRNDRLVPEKVSSV--EGEKMVLIACGWRHTITVSSSGSLYTYGWSKY 262

Query: 353 GALGHGDEIDKTLPEPLSSLKS 374
           G LGHGD  D  +P  L +LK 
Sbjct: 263 GQLGHGDFEDHLVPHKLEALKD 284



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 110/226 (48%), Gaps = 9/226 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEA 212
           R + P A  VV VSA  +H+  +L    + + G       GH D      P        A
Sbjct: 17  REDPPPA--VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
             G+    +    + T +      V++ G    G+LGHG++ D  TP+ +  L+ +  + 
Sbjct: 75  APGI-TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KIK 132

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQ+F  +G+ V  ++AG 
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSF--EGVCVKMIAAGA 190

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           EH  A+   G +Y WG G  G LG GD  D+ +PE +SS++    V
Sbjct: 191 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMV 236



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     +  G   T  ++ 
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PEKVSSVEGEKMVLIACGWRHTITVSS 250

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L++  S+ QI+ G  + +A+T +G +Y +
Sbjct: 251 SGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-SSISQISGGWRHTMALTSDGKLYGW 309

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  +Q    +   V +V+ G  H +A      V++WG+G  G
Sbjct: 310 GWNKFGQVGVGDTDDHCFP--VQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSG 367

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGHG+ +D+  P  + +L
Sbjct: 368 QLGHGEIVDRNKPVMIDAL 386



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-EKVSSVEGEKMVLIACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 245 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSSISQISGGWRHTMALTSD 303

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GDT D   P  +    E   V Q+A G  + LA T    V+S+G
Sbjct: 304 GKLYGWGWNKFGQVGVGDTDDHCFPVQVK-FPEDQKVAQVACGWRHTLAFTEKKNVFSWG 362

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHGE  D  +P  I      G
Sbjct: 363 RGTSGQLGHGEIVDRNKPVMIDALSPDG 390



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 16/196 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT+ +S+S S+++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 238 IACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSSISQISGGWRH 296

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  DT+   F P  V+  +     QV  G   T   T +
Sbjct: 297 TMALTSDGKLYGWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQKVAQVACGWRHTLAFTEK 355

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTP-------------KSIAPLEEVGSVVQIAAGPSYM 281
            +V + G  T GQLGHG+ +DR  P             K + P   V    ++   PS  
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPDGPGCKKLEPSTAVPFAAKVWVSPSER 415

Query: 282 LAVTGNGVVYSFGSGS 297
            A+  +  V + G G+
Sbjct: 416 YAIVPDEKVPNSGEGT 431


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 136/291 (46%), Gaps = 21/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+  CG+LGHG + +  V   
Sbjct: 350 VLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVP-K 408

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 409 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 467

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 468 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV 527

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A +    +  Q+A G S  +A+T  G VY+ GS     LG   Q D   P  ++ ++   
Sbjct: 528 ALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGI-PQADGKLPICVE-WKLSE 585

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 586 SFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 636



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 19/217 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ +    GH   +  +  P+L+EAL     + V  G
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGH-GVDSDVLHPKLIEALSNTNIELVACG 370

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 371 EYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGI-HVSYISCGPWHT 429

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAACGVWHTAAVVEV 487

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                     SSG ++TWG G  G LGHGD+  K +P
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 524



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G    G+LGHG   D   PK I  L 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+  C  LGHG Q     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNG-PLEGIH 418

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK
Sbjct: 419 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLK 467



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 21/227 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        V+ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-- 219
           H A V++            SG++FT GD      GH D    +   R+  AL  V     
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV--ALVNVKPNFC 537

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G + T  LT +GHV+T GS  +GQLG     D   P  +        V +IA G  
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQA-DGKLPICVEWKLSESFVEEIACGAY 596

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 643



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PKS+     V  V  IA G  +   VT  G ++S+G  +   LGHG   D L
Sbjct: 293 GVKMDSLFPKSLESAV-VLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVL 351

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE 367
            P+ I+      I +V  + G+ H  A+  SG +YTWG G   CG LGHG+++   +P+
Sbjct: 352 HPKLIEALSNTNIELV--ACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPK 408



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 17/197 (8%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 470 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 522

Query: 152 VSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPI-FRP 207
           V  TR+   +   +  QV+   +    +   G V+T G       G    D   PI    
Sbjct: 523 VP-TRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEW 581

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           +L E+      +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L++
Sbjct: 582 KLSESF----VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKD 637

Query: 268 VGSVVQIAAGPSYMLAV 284
              V  IA G ++  A+
Sbjct: 638 -KDVKSIACGTNFTAAI 653



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           L +   V++ GS + G LG      +   CV +      S + V +++    H A +   
Sbjct: 549 LTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKL----SESFVEEIACGAYHVAVLTSR 604

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 605 TEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTNFTAAICLHKWV 659


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 127/255 (49%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGHG E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G D   + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKDFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSL 372
               D+  P  +  L
Sbjct: 277 DSMNDEVNPRRVLEL 291



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G+    +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 245



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGHG   ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHGREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G +   +  P+ + SL+
Sbjct: 172 GKDFPSQASPQRVRSLE 188


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 5/259 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 355 LGHGDEIDKTLPEPLSSLK 373
           LGHGD  D  +P  + +LK
Sbjct: 254 LGHGDFEDHLVPHKVEALK 272



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 5/215 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  + + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--ESVCVKMIAAGAEHTAAVTEDGD 190

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +Y WG G  G LG GD  D+ LPE +SS++    V
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV 225



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I    +  V  ++A   
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRHTMALTSEGKLYGW 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G   D   P  +     + I   +V+ G  H +AL     V++WG+G  G
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKIS--QVACGWRHTLALSEKKNVFSWGRGTSG 356

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LG+G+ +D+  P  + +L S
Sbjct: 357 QLGNGEIVDRNTPVLIDALSS 377



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+  D  +P  ++   E   + Q+A G  + LA++    V+S+G
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS-FPEDQKISQVACGWRHTLALSEKKNVFSWG 351

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LG+GE  D   P  I      G
Sbjct: 352 RGTSGQLGNGEIVDRNTPVLIDALSSDG 379



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 9/127 (7%)

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           AP     +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F    
Sbjct: 7   APDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA 66

Query: 323 IHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           I    V  G +H  A  +    VY+WG G  G LGHG+  D   P+P+ +L      QGL
Sbjct: 67  I--TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL------QGL 118

Query: 382 SVLAEVC 388
            +    C
Sbjct: 119 KIKQIAC 125



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 7/159 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KVEALKDSTISQISGGWRH 285

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G+++  G N       G+ D +     P  V   +     QV  G   T  L+
Sbjct: 286 TMALTSEGKLYGWGWNKFGQVGVGNNDDHS---SPGQVSFPEDQKISQVACGWRHTLALS 342

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            + +V + G  T GQLG+G+ +DR TP  I  L   GS 
Sbjct: 343 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSA 381


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 137/290 (47%), Gaps = 22/290 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHADGKL-PNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC 388
             VYTWGKG  G LGHGD  D+  P  + SLK         G +  A VC
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC 649



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G  G LGHG++  K +P  +++L
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAAL 526



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK      GL  +  
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLK------GLRTVRA 470

Query: 387 VC 388
            C
Sbjct: 471 AC 472


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 128/248 (51%), Gaps = 7/248 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 171
           ++T G+ HT+ +S+   VF+ G +  G +G G +  + V          A   VVQ++  
Sbjct: 89  KVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACG 148

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            NH+  +  SG +F  GDNSS   G   T+  +  P  V +L GVP   ++AG   +  L
Sbjct: 149 CNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFAL 208

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G +   G N +GQLG  DT DRP P  +  L   G V  ++ G  +   +T +G V+
Sbjct: 209 SSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLTSDGGVF 267

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG G++  LGH   H E  PR +  F   G  V +++ G  H +AL  SSG VYT+G+G
Sbjct: 268 TFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRG 325

Query: 351 YCGALGHG 358
             G LG G
Sbjct: 326 GDGQLGLG 333



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 12/251 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +F  G    G LG G    + +S  R+  N   +++V +VS   NH AF+ + G V+TCG
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     G   ++     P  V A++     +VT G   T  ++ +G V   G N++GQ+
Sbjct: 61  SNEFGQLGQEKSHT---NPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117

Query: 249 GHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G G  +       PK +  L ++ SVVQIA G ++ +A+T +G ++ +G  S+  LG G+
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKM-SVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGK 176

Query: 306 QHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            H  + +P  + +    G+  + +SAG  H  AL SSG ++ WGK   G LG  D  D+ 
Sbjct: 177 THSSMSEPAPVLSL--NGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRP 234

Query: 365 LPEPLSSLKSH 375
           LP  L SL+S 
Sbjct: 235 LPTLLKSLRSQ 245



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 138/296 (46%), Gaps = 31/296 (10%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGH-----GPETT 149
           R L+++E SS++ E S G        +   L  + +V++CGS+  G LG       PE+ 
Sbjct: 26  RLLENLEFSSNVREVSCG------WNHTAFLCKDGTVYTCGSNEFGQLGQEKSHTNPESV 79

Query: 150 QCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFR 206
             + +FT         + +V+  + H   V   G VF  GDNS      G +   +    
Sbjct: 80  HAIETFT---------ITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTI 130

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIA 263
           P++++ L  +   Q+  G N +  LTI GH+   G N+ GQLG G T   +  P P  + 
Sbjct: 131 PKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAP--VL 188

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L  V  ++ I+AG ++  A++ +G ++ +G      LG  +  D   P  +++ R +G 
Sbjct: 189 SLNGVPFML-ISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG- 246

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            V  VS G++H   L S G V+T+G G  G LGH     +  P  +  L   +  Q
Sbjct: 247 -VCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQ 301



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 16/204 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M I+ G  H+  +S+S ++F  G +  G LG    T + +  T +    +  V  VS  E
Sbjct: 196 MLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLP-TLLKSLRSQGVCYVSCGE 254

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
            H A +   G VFT G  +S   GH ++N   + PR V  L G    Q+  G   T   +
Sbjct: 255 KHTAVLTSDGGVFTFGCGTSGQLGH-NSNHHEYTPRKVFELMGSVVTQIACGRAHTLALV 313

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V+T G    GQLG G T +       +P+   G  ++     S +    G+ VVY
Sbjct: 314 PSSGRVYTFGRGGDGQLGLGVTNN-----CNSPMTAKGPWLRSNNIKSMLPEADGDSVVY 368

Query: 292 S---FGSGSNFCLG----HGEQHD 308
           +     +G + C      +G++ D
Sbjct: 369 TVRRIDAGGDHCFAMASSYGDETD 392


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 5/259 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 355 LGHGDEIDKTLPEPLSSLK 373
           LGHGD  D  +P  + +LK
Sbjct: 254 LGHGDFEDHLVPHKVEALK 272



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F    + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFES--VCVKMIAAGAEHTAAVTEDGD 190

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +Y WG G  G LG GD  D+ LPE +SS++    V
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV 225



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 4/202 (1%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I    +  V  ++A   
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDS-TISQISGGWRHTMALTSEGKLYGW 298

Query: 294 GSGSNFCLGHGEQHDELQPRAI 315
           G      +G G   D   P  +
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQV 320



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 9/127 (7%)

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           AP     +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F    
Sbjct: 7   APDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA 66

Query: 323 IHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           I    V  G +H  A  +    VY+WG G  G LGHG+  D   P+P+ +L      QGL
Sbjct: 67  I--TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL------QGL 118

Query: 382 SVLAEVC 388
            +    C
Sbjct: 119 KIKQIAC 125



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           G ++  G N  GQ+G G+  D  +P  ++
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS 321


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHG   DK  P  + +LK       V G++  A +C
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC 654



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 19/231 (8%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAAL 531



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLK 468



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 538 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----PQADGLLPVRVEGKLHKNFVEEISC 593

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH  T+     P LVEALK    + V  G+NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 652

Query: 231 LTIRGHVHTCGSN 243
           + I  H    GS+
Sbjct: 653 ICI--HKWVSGSD 663


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSL 372
           G   D+  P  +  L
Sbjct: 277 GSMNDEVNPRRVLEL 291



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 7/259 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGHG  +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPL 369
             G LG G   +   P P+
Sbjct: 323 ARGQLGTGHTCNVKCPSPV 341



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG NS    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  SKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +T P+ + SL+
Sbjct: 172 GKEFPSQTSPQRVRSLE 188


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 139/309 (44%), Gaps = 25/309 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 350 VMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 408

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + I  P+ VE+LK
Sbjct: 409 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSISLPKEVESLK 467

Query: 215 GVPCKQVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 468 GLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 527

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L E  +  Q+A G S  +A T +G VY+ GS     LG+     +L  R      +  
Sbjct: 528 AALVEP-NFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKS- 585

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ--- 379
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK         
Sbjct: 586 -FVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 644

Query: 380 GLSVLAEVC 388
           G S  A +C
Sbjct: 645 GTSFTAAIC 653



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 25/235 (10%)

Query: 159 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A     V   +N      HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVMHPKLIDA 358

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE + 
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI- 417

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     P+ +++   KG+  V+ +
Sbjct: 418 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESL--KGLRTVQAA 475

Query: 330 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L
Sbjct: 476 CGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 530



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 4/175 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 418

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP+ + SLK    VQ
Sbjct: 419 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQ 473



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D +
Sbjct: 293 GVKMDSLFPKALESAV-VLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM 351

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE 367
            P+ I       I +V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P+
Sbjct: 352 HPKLIDALSNTNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 408



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 122 HTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAF 177
           H+L ++ ++   V++ GS + G LG+     +    TR+    S + V +++    H A 
Sbjct: 542 HSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLP--TRVEGKLSKSFVEEIACGAYHVAV 599

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +    +V+T G  ++   GH DT+     P LVEALK    K +  G +FT  + +   V
Sbjct: 600 LTSKTEVYTWGKGANGRLGHGDTD-DRNSPSLVEALKDKQVKSIACGTSFTAAICLHKWV 658


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHG   DK  P  + +LK       V G++  A +C
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC 654



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 19/231 (8%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAAL 531



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLK 468



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 538 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----PQADGLLPVRVEGKLHKNFVEEISC 593

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH  T+     P LVEALK    + V  G+NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 652

Query: 231 LTIRGHVHTCGSN 243
           + I  H    GS+
Sbjct: 653 ICI--HKWVSGSD 663


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 135/261 (51%), Gaps = 14/261 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H+L++S+  +VFS G  + G LGHG +  Q V    I+      VV ++A  
Sbjct: 169 VKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVP-KLISSLQREKVVDIAAGS 227

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------LN 226
            H+  V +SG V++ G  S    GH DT+  +  P+ +E     P  +V AG      L+
Sbjct: 228 AHSLVVAESGDVYSFGLGSEGALGHGDTDMSLV-PKKIEHFVQRPAVKVAAGGSHSLVLS 286

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               L   G V + G N++GQLG G    R    S A ++   + V+I AG  + L +T 
Sbjct: 287 KLYVLEQEGRVLSFGQNSYGQLGLG-HFSRMIA-SPAQVQVEAAAVEIEAGAHHSLVLTN 344

Query: 287 NGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           +G VYSFG   +  LGHG    D  +P  IQ+  R+   +V V+AG+   + L + G V+
Sbjct: 345 DGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERE--RIVDVAAGNNFSLVLSAEGTVF 402

Query: 346 TWGKGYCGALGHGDEIDKTLP 366
           ++G G  G LG GDE + T P
Sbjct: 403 SFGCGKNGRLGKGDESNATQP 423



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT-----HGQLGHGDTLDRPTP 259
            RP+ VEAL     + V+AGL  +   T  G + + G  +      G+LGHGD   +  P
Sbjct: 98  LRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIP 157

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + +  L  V  +V++AAG  + L ++  G V+SFG G +  LGHG+Q  +L P+ I + +
Sbjct: 158 RPVLSLSGV-RIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQ 216

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           R+   VV ++AG  H + +  SG VY++G G  GALGHGD     +P+ +       AV+
Sbjct: 217 RE--KVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVK 274



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 12/210 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H+L+++ S  V+S G    G LGHG +T   +   +I        V+V+A  
Sbjct: 221 VDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG-DTDMSLVPKKIEHFVQRPAVKVAAGG 279

Query: 173 NHAA-----FVL-QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +H+      +VL Q G+V + G NS    G    +R I  P  V+        ++ AG +
Sbjct: 280 SHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVE--AAAVEIEAGAH 337

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  LT  G V++ G   HGQLGHG+ L D P P  I  LE    +V +AAG ++ L ++
Sbjct: 338 HSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERE-RIVDVAAGNNFSLVLS 396

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             G V+SFG G N  LG G++ +  QP  +
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVV 426



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 8/135 (5%)

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-----NFCLGH 303
           GHGD +D+  PK +  L     V  ++AG  + L  T +G + SFG GS     +  LGH
Sbjct: 90  GHGDHVDKLRPKCVEALARE-RVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGH 148

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G+Q  ++ PR + +    G+ +V+V+AG  H + L   G V+++G G  G+LGHGD+  +
Sbjct: 149 GDQRTQMIPRPVLSL--SGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQ 206

Query: 364 TLPEPLSSLKSHLAV 378
            +P+ +SSL+    V
Sbjct: 207 LVPKLISSLQREKVV 221


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 136/263 (51%), Gaps = 19/263 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+  + V S G    G LGHG +    +S T ++      VV V+   +H
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGADH 79

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     QV++ G      C        +F P+ ++AL G+  KQ+  G +    +T+
Sbjct: 80  TTAYSESFTQVYSWG------C-------DLFTPQPIKALHGLRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y +
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 243

Query: 354 ALGHGDEIDKTLPEPLSSLKSHL 376
            LGHGD  D   P  L +L+ +L
Sbjct: 244 QLGHGDFEDHLTPHKLEALQENL 266



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 171

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 172 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 230

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 289

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 290 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 347

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHG+ ID+ +P+ +  L +
Sbjct: 348 QLGHGESIDRNIPKMIEVLSA 368



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 106/224 (47%), Gaps = 21/224 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 18  VLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRL-SPTYLSALDGHEVVSVTCG 76

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T          T  S +  Q+ +    D  TP+ I  L  +  + QIA G S+ LAV
Sbjct: 77  ADHT----------TAYSESFTQV-YSWGCDLFTPQPIKALHGL-RIKQIACGDSHCLAV 124

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V S+G   N  LG G   D L P+ IQ F  +G+ V  V+AG EH  A+   G +
Sbjct: 125 TMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSVKMVAAGAEHTAAVTEDGEL 182

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           Y WG G  G LG GD  D+ +PE +S+      V+G+ ++   C
Sbjct: 183 YGWGWGRYGNLGLGDRNDRLVPEKVST------VEGVKMVKVAC 220



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 166 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 225 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGHGESIDRNIPKMIEVLSADG 370



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 216 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 274

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 275 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 333

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 334 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 371


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 130/247 (52%), Gaps = 10/247 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET--TQCVSFTRINFPSAAHVVQVSAS 171
           Q++ G YH L++++   VFS G   CG LGH  E           +   S+  +VQV+  
Sbjct: 88  QVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACG 147

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             H+  +   G++F+ G+NS    G   T N+P  +P+ + +L G+P  Q+ AG + +  
Sbjct: 148 GKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQP--KPQELTSLTGIPFCQIVAGGSHSFV 205

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L+  G V   G NT GQLG GDT DR  P  +  L  +  V  I+ G  +   +T +G V
Sbjct: 206 LSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSL-KVTHISCGEEHTAVLTLDGGV 264

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGK 349
            +FG+GS   LGH   + E  PR +  F   G+ V +++ G  H +A ++SSG +Y++G 
Sbjct: 265 LTFGAGSYGQLGHNSNNHEALPRKV--FELMGLEVTQLACGRMHTMAYVESSGRIYSFGL 322

Query: 350 GYCGALG 356
           G  G LG
Sbjct: 323 GGNGQLG 329



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 129/264 (48%), Gaps = 15/264 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ GR HT+ + +  +V++CGS+  G LG      +    T ++  S   + QVS  + 
Sbjct: 38  EVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPTVITALDTQS---IQQVSCGDY 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H   V    QVF+ G +     GH      + +R   RPR+V+ L  +   QV  G   +
Sbjct: 95  HNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSR---RPRMVKELSSLQIVQVACGGKHS 151

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L+  G + + G+N+HGQLG G T ++P P+ +  L  +    QI AG S+   ++ +G
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGI-PFCQIVAGGSHSFVLSKSG 210

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ FG  +   LG G+  D   P  +++ R   + V  +S G+EH   L   G V T+G
Sbjct: 211 AVFGFGRNTFGQLGLGDTGDRKYPTHVKSLR--SLKVTHISCGEEHTAVLTLDGGVLTFG 268

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGH     + LP  +  L
Sbjct: 269 AGSYGQLGHNSNNHEALPRKVFEL 292



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 8/157 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++V+ G   T F+   G V+TCGSN +GQLG      RPT   +    +  S+ Q++ G 
Sbjct: 37  REVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPT---VITALDTQSIQQVSCGD 93

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            + L V     V+S+G      LGH  +   ++  +PR ++      + +V+V+ G +H 
Sbjct: 94  YHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKEL--SSLQIVQVACGGKHS 151

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +AL + G +++WG    G LG G   ++  P+ L+SL
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSL 188



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 15/196 (7%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
           +Q+  G  H+L +SN   +FS G++  G LG G     P+  +  S T I F       Q
Sbjct: 142 VQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPF------CQ 195

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           + A  +H+  + +SG VF  G N+    G  DT    + P  V++L+ +    ++ G   
Sbjct: 196 IVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKY-PTHVKSLRSLKVTHISCGEEH 254

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTG 286
           T  LT+ G V T G+ ++GQLGH        P+ +  L  +  V Q+A G  + +A V  
Sbjct: 255 TAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGL-EVTQLACGRMHTMAYVES 313

Query: 287 NGVVYSFGSGSNFCLG 302
           +G +YSFG G N  LG
Sbjct: 314 SGRIYSFGLGGNGQLG 329



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H+ ++S S +VF  G +  G LG G +T      T +    +  V  +S  E 
Sbjct: 195 QIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLG-DTGDRKYPTHVKSLRSLKVTHISCGEE 253

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-LNFTGFLT 232
           H A +   G V T G  S    GH   N     PR V  L G+   Q+  G ++   ++ 
Sbjct: 254 HTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL-PRKVFELMGLEVTQLACGRMHTMAYVE 312

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----------APLEEVGSVVQ-IAAGPSYM 281
             G +++ G   +GQLG   T +  TP ++            LEE   VVQ I AG    
Sbjct: 313 SSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCYVVQAITAGGDQA 372

Query: 282 LAV 284
            A+
Sbjct: 373 FAL 375


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 22/290 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGN-SHADGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC 388
             VYTWGKG  G LGHGD  D+  P  + SLK         G +  A VC
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC 649



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G  G LGHG++  K +P  +++L
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAAL 526



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK      GL  +  
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLK------GLRTVRA 470

Query: 387 VC 388
            C
Sbjct: 471 AC 472


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 9/254 (3%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSG 182
           L+ ++++++  GS++ G LG G    + +   R ++F  A  V Q++  E H   + + G
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF+CG+N S   GH    +P  R +++  L     KQ   G + +  +   G +   GS
Sbjct: 81  EVFSCGNNDSGQLGHE---KPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGS 137

Query: 243 NTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           N  GQLG G  L    TP+ +  L     VVQIA G  + LA+T NG +Y++GS S+  L
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKAL-GTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQL 196

Query: 302 GHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           G G+    E +P+ I       I +  ++ G  H + +  SG V+ WG+   G LG  D 
Sbjct: 197 GLGQDVKIETRPKLITGL--ATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDI 254

Query: 361 IDKTLPEPLSSLKS 374
            DK +P  L +L++
Sbjct: 255 SDKYVPCLLKTLRN 268



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 124/267 (46%), Gaps = 8/267 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HT+LI+ +  VFSCG++  G LGH   T +      ++   A    Q +   +
Sbjct: 65  QIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIPGLD---AFIFKQAACGAS 121

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V   GQ+F  G N+    G          PR+V+AL      Q+  G   T  LT 
Sbjct: 122 HSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN 181

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  GSN+ GQLG G  +   T PK I  L  +  +  IA G  + + V+ +G V+ 
Sbjct: 182 NGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATI-PIAFIACGGYHSIVVSKSGAVFG 240

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  +   LG  +  D+  P  ++T R   +  V  + G+E  V L   G V+T G G  
Sbjct: 241 WGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYV--ACGEEFSVFLTMDGGVFTCGAGMY 298

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G LGHG   ++ LP  +  L   +  Q
Sbjct: 299 GQLGHGANSNEILPRQIIELMGSVVTQ 325



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 5/235 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H++ ++N   +F  GS+  G LG G   T   +   +     + VVQ++  + 
Sbjct: 115 QAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKK 174

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +  +G+++  G NS    G     +   RP+L+  L  +P   +  G   +  ++ 
Sbjct: 175 HTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSK 234

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G NT GQLG  D  D+  P  +  L     V  +A G  + + +T +G V++ 
Sbjct: 235 SGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRN-AKVKYVACGEEFSVFLTMDGGVFTC 293

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTW 347
           G+G    LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY W
Sbjct: 294 GAGMYGQLGHGANSNEILPR--QIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G+ HTL L +N  +++ GS+  G LG G +         I   +   +  ++   
Sbjct: 167 VQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGG 226

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  V +SG VF  G N+    G  D +   + P L++ L+    K V  G  F+ FLT
Sbjct: 227 YHSIVVSKSGAVFGWGRNTFGQLGMNDISDK-YVPCLLKTLRNAKVKYVACGEEFSVFLT 285

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
           + G V TCG+  +GQLGHG   +   P+ I  +E +GSVV QI+ G  + LA V   G V
Sbjct: 286 MDGGVFTCGAGMYGQLGHGANSNEILPRQI--IELMGSVVTQISCGKRHTLALVPSRGKV 343

Query: 291 YSF 293
           Y++
Sbjct: 344 YAW 346


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHG   DK  P  + +LK       V G++  A +C
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC 654



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 19/231 (8%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAAL 531



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLK 468



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 538 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----PQADGLLPVRVEGKLHKNFVEEISC 593

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH  T+     P LVEALK    + V  G+NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 652

Query: 231 LTIRGHVHTCGSN 243
           + I  H    GS+
Sbjct: 653 ICI--HKWVSGSD 663


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 142/291 (48%), Gaps = 21/291 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            +  + H S I + S G+       Y   + ++  +   G   CG LG G     C+   
Sbjct: 34  LVDGLRHLSSISKVSCGS------NYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VP 85

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLV 210
           R+N  S  +VVQV+ S+ H A +L +G+++T G + +   GH       +N  + +P  V
Sbjct: 86  RVNL-SLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKV 144

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           +AL+G    QV+ G   TG LT      T G    G+LGHGDT D  TPK I  L  +  
Sbjct: 145 KALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-P 203

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + +I+ G  +   +   G +Y FG G+   LG G   D L PR ++    + I + +VS 
Sbjct: 204 IKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSL 262

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAV 378
           G +H  A+   G VYTWG+G  G LGH   G E D   P+ LS+L+    V
Sbjct: 263 GSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIV 311



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 26/282 (9%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP------SAAHVVQVSASEN 173
           R+   ++SN  +++ G S  G LGHG +    +S   ++ P          V+QVS    
Sbjct: 102 RHTAAILSNGELYTWGCSKNGKLGHG-QFELSISNNVVSQPMKVKALEGEKVIQVSCGSY 160

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +    +  T G       GH DT + IF P+L+E+L G+P K+++ G + T  L +
Sbjct: 161 HTGCLTDDKKALTWGLGLQGRLGHGDT-QDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  G    G+LG G T D   P+ +  PLE++  + +++ G  +  AVT  G VY+
Sbjct: 220 TGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDI-QITKVSLGSQHSAAVTKCGKVYT 278

Query: 293 FGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +G G    LGH   G +HD L P+ +    +    +V +S G+ H VAL   G +YTW  
Sbjct: 279 WGQGGR--LGHIFNGPEHDFLSPKRLSNLEKA--FIVDISCGNSHSVALSDVGDIYTW-- 332

Query: 350 GYCGALGHGDE-IDKTLPEPLSSLKSHLAVQGLSVLAEVCPT 390
           G    +GHG + I   +P        H  +Q  +++  VC +
Sbjct: 333 GMTKNIGHGIQGIHPNMPS------KHPILQNKNIVQVVCSS 368



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 12/173 (6%)

Query: 207 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 319
           +   +VVQ+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESL 199



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GS+ +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG G   D L PR   + +    +VV+V+  D H  A+ S+G +YTWG    G LG
Sbjct: 70  GCGQLGFGNLEDCLVPRVNLSLK----NVVQVACSDRHTAAILSNGELYTWGCSKNGKLG 125

Query: 357 HG 358
           HG
Sbjct: 126 HG 127



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (4%)

Query: 106 IVETSAG--NMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFP- 160
           ++E+ AG    +I+ G +HT +L+    ++  G    G LG G  +T  V   R+   P 
Sbjct: 195 LIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFG--STDDVLIPRLLEGPL 252

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               + +VS    H+A V + G+V+T G                  P+ +  L+      
Sbjct: 253 EDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVD 312

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++ G + +  L+  G ++T G   +  +GHG     P   S  P+ +  ++VQ+    S+
Sbjct: 313 ISCGNSHSVALSDVGDIYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSH 370

Query: 281 MLAVTGNGVV 290
            +A++  G +
Sbjct: 371 SIALSDIGAL 380


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 22/290 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 410

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 411 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 469

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 470 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 528

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 529 VALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 586

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC 388
             VYTWGKG  G LGHGD  D+  P  + SLK         G +  A VC
Sbjct: 587 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC 636



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 354

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 472

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G  G LGHG++  K +P  +++L
Sbjct: 473 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAAL 513



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 346 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 403

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK      GL  +  
Sbjct: 404 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLK------GLRTVRA 457

Query: 387 VC 388
            C
Sbjct: 458 AC 459


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 132/259 (50%), Gaps = 5/259 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 138 GQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGV-CVKMIAAGAEHTAAVTEDGDLYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLK 373
           LGHGD  D  +P  L +LK
Sbjct: 255 LGHGDFEDHLVPHKLEALK 273



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 106/215 (49%), Gaps = 5/215 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPGITSVICG 74

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+   G 
Sbjct: 134 VTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGVCVKMIAAGAEHTAAVTEDGD 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +Y WG G  G LG GD  D+ LPE +SS++    V
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV 226



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 123 QIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGVCVKMIAAGAE 181

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 182 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 240

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 241 SGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-STISQISGGWRHTMALTSEGKLYGW 299

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G   D   P  +Q    +   + +V+ G  H +AL     V++WG+G  G
Sbjct: 300 GWNKFGQVGVGNNDDHCSP--VQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSG 357

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LG+G+ +D+  P  + +L +
Sbjct: 358 QLGNGEIVDRNTPVLIDALST 378



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 235 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSTISQISGGWRHTMALTSE 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+  D  +P  +    E   + Q+A G  + LA++    V+S+G
Sbjct: 294 GKLYGWGWNKFGQVGVGNNDDHCSPVQVH-FPEDQKISQVACGWRHTLALSEKKNVFSWG 352

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LG+GE  D   P  I      G
Sbjct: 353 RGTSGQLGNGEIVDRNTPVLIDALSTDG 380



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F   GI    V 
Sbjct: 15  TVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGI--TSVI 72

Query: 330 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G +H  A  +    VY+WG G  G LGHG+  D   P+P+ +L      QGL +    C
Sbjct: 73  CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL------QGLKIKQIAC 126



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 228 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSTISQISGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G+++  G N       G+ D +    +    E  K     QV  G   T  L+
Sbjct: 287 TMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK---ISQVACGWRHTLALS 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            + +V + G  T GQLG+G+ +DR TP  I  L   GS
Sbjct: 344 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGS 381


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHG   DK  P  + +LK       V G++  A +C
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC 654



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 19/231 (8%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAAL 531



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLK 468



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 538 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----PQADGLLPVRVEGKLHKNFVEEISC 593

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH  T+     P LVEALK    + V  G+NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 652

Query: 231 LTIRGHVHTCGSN 243
           + I  H    GS+
Sbjct: 653 ICI--HKWVSGSD 663


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 126/264 (47%), Gaps = 28/264 (10%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT---RINFPSAAHVVQVSASENHAAFVLQS 181
           L  N  V+S G +  G+LGH  E     + T   RI       + Q+S  + H A V + 
Sbjct: 97  LTHNGEVYSWGKNKGGILGH--EDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTED 154

Query: 182 GQVFTCGDNSSFCCGHR------------------DTNRPIFRPRLVEALKGVPCKQVTA 223
           G+V+T G+      GH                   D  +    P+ +E+L  +  KQV  
Sbjct: 155 GEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVAC 214

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G+ FT  L+  G V+T G N +G LG+  D     TP+ I  L ++   V+I+AG S+  
Sbjct: 215 GIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI---VKISAGYSFCA 271

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T  G +Y++G+  N  LG+ +   + +P  +  F  +   +V VS GD  + AL   G
Sbjct: 272 AITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN-SIVDVSCGDNFIAALTQQG 330

Query: 343 YVYTWGKGYCGALGHGDEIDKTLP 366
            +YTWG G  G LGHG++ D   P
Sbjct: 331 QLYTWGFGGDGQLGHGNKSDLYAP 354



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 129/266 (48%), Gaps = 25/266 (9%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINF----------PS 161
           QI+ G++H   ++ +  V++ G+   G LGH  E    Q +   R N           P 
Sbjct: 140 QISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQ 199

Query: 162 AAHVV------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
               +      QV+        + + G+V+T G N     G+      +  P+L++ L  
Sbjct: 200 KIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLND 259

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +   +++AG +F   +T +G ++T G+N +GQLG+  +L +  P  +       S+V ++
Sbjct: 260 IV--KISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVS 317

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G +++ A+T  G +Y++G G +  LGHG + D   PR ++ F++K   +++++ G  H 
Sbjct: 318 CGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVE-FKQK---IIKIACGGSHA 373

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEI 361
             +     +Y +G+G  G LG G  +
Sbjct: 374 AFITEDNQLYQFGRGSEGQLGIGQNV 399



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 27/285 (9%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+S G    G LG   E       T I   +   + +V A ++ +  +  +G+V++ G N
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTP-TEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 191 SSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                GH D  +  + +P  +E L G   KQ++ G      +T  G V+T G+   G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 250 HGDTL-------------------DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           H + L                   D   P+ I  L  +    Q+A G  + + ++ +G V
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNI-KAKQVACGIQFTVVLSEDGKV 228

Query: 291 YSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           Y+FG      LG+  +Q+    P+ I+        +V++SAG     A+   G +YTWG 
Sbjct: 229 YTFGYNQYGSLGYVSDQNSVTTPQLIKDLN----DIVKISAGYSFCAAITKQGKLYTWGN 284

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQE 394
              G LG+   + +T P  ++   S  ++  +S        + Q+
Sbjct: 285 NRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQ 329



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           +VYS+G G    LG   +++   P  I+    K I   +V AG    +AL  +G VY+WG
Sbjct: 50  IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIK--KVEAGKSISMALTHNGEVYSWG 107

Query: 349 KGYCGALGHGDEI--DKTLPEPLSSL 372
           K   G LGH D +  + T PE +  L
Sbjct: 108 KNKGGILGHEDRLSFNMTQPERIEKL 133


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 26/282 (9%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP------SAAHVVQVSASEN 173
           R+   ++SN  +++ G S  G LGHG +    +S   ++ P          V+QVS    
Sbjct: 102 RHTAAILSNGELYTWGCSKNGKLGHG-QFELSISNNVVSQPMKVKALEGEKVIQVSCGSY 160

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +    +  T G       GH DT + IF P+L+E+L G+P K+++ G + T  L +
Sbjct: 161 HTGCLTDDKKALTWGLGLQGRLGHGDT-QDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  G    G+LG G T D   P+ +  PLE++  + +++ G  +  AVT  G VY+
Sbjct: 220 TGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDI-QITKVSLGSQHSAAVTKCGKVYT 278

Query: 293 FGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +G G    LGH   G +HD L P+ +    +    +V +S G+ H VAL   G +YTW  
Sbjct: 279 WGQGGR--LGHIFNGPEHDFLSPKRLSNLEKA--FIVDISCGNSHSVALSDVGDIYTW-- 332

Query: 350 GYCGALGHGDE-IDKTLPEPLSSLKSHLAVQGLSVLAEVCPT 390
           G    +GHG + I   +P        H  +Q  +++  VC +
Sbjct: 333 GMTKNIGHGIQGIHPNMPS------KHPILQNKNIVQVVCSS 368



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 21/291 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            +  + H S I + S G+       Y   + ++  +   G   CG LG G     C+   
Sbjct: 34  LVDGLRHLSSISKVSCGS------NYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VP 85

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLV 210
           R+N  S  +V+QV+ S+ H A +L +G+++T G + +   GH       +N  + +P  V
Sbjct: 86  RVNL-SLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKV 144

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           +AL+G    QV+ G   TG LT      T G    G+LGHGDT D  TPK I  L  +  
Sbjct: 145 KALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-P 203

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + +I+ G  +   +   G +Y FG G+   LG G   D L PR ++    + I + +VS 
Sbjct: 204 IKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSL 262

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAV 378
           G +H  A+   G VYTWG+G  G LGH   G E D   P+ LS+L+    V
Sbjct: 263 GSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIV 311



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 12/173 (6%)

Query: 207 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 319
           +   +V+Q+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESL 199



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 4/122 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GS  +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG G   D L PR   + +    +V++V+  D H  A+ S+G +YTWG    G LG
Sbjct: 70  GCGQLGFGNLEDCLVPRVNLSLK----NVIQVACSDRHTAAILSNGELYTWGCSKNGKLG 125

Query: 357 HG 358
           HG
Sbjct: 126 HG 127



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 5/188 (2%)

Query: 106 IVETSAG--NMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           ++E+ AG    +I+ G +HT +L+    ++  G    G LG G      +          
Sbjct: 195 LIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLED 254

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             + +VS    H+A V + G+V+T G                  P+ +  L+      ++
Sbjct: 255 IQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDIS 314

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + +  L+  G ++T G   +  +GHG     P   S  P+ +  ++VQ+    S+ +
Sbjct: 315 CGNSHSVALSDVGDIYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSI 372

Query: 283 AVTGNGVV 290
           A++  G +
Sbjct: 373 ALSDIGAL 380


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 107/213 (50%), Gaps = 6/213 (2%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V  +G V+T G       GH D    I  P+ V  +KG   K V+AG   T  +T 
Sbjct: 284 HCAAVTDTGLVYTWGQGRYGQLGHGDDVDKII-PQPVPRIKG-EVKSVSAGFYHTVAVTH 341

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA-AGPSYMLAVTGNGVVYS 292
            G + T G    G+LGH D   R  P  +A   E G  V  A AG S+ L +   G V+S
Sbjct: 342 HGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFS 401

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FGSG +  LGHG  +D+  P  +     +    V ++AG  H VAL   G +YTWG G  
Sbjct: 402 FGSGDSGRLGHGNDNDQWSPTFLSALESE--RCVSIAAGFAHSVALTDQGQIYTWGCGKL 459

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           G LGHG + D+ LP  L +L SH  ++ ++V A
Sbjct: 460 GRLGHGSDSDEVLPRKL-ALISHDTIKAIAVAA 491



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 109/232 (46%), Gaps = 10/232 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           V++ G    G LGHG +  + +     RI       V  VSA   H   V   G +FT G
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRIK----GEVKSVSAGFYHTVAVTHHGALFTWG 349

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           D      GH D  + +  P LV A    G+P     AG + T  L  RG V + GS   G
Sbjct: 350 DGKEGKLGHNDNAQRLI-PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSG 408

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           +LGHG+  D+ +P  ++ LE     V IAAG ++ +A+T  G +Y++G G    LGHG  
Sbjct: 409 RLGHGNDNDQWSPTFLSALESE-RCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSD 467

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            DE+ PR +       I  + V+AG+ H     S G + T G+   G +  G
Sbjct: 468 SDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEG 519



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 2/166 (1%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+ V    ++ G      +T  G V+T G   +GQLGHGD +D+  P+ +  ++  G V 
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK--GEVK 327

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++AG  + +AVT +G ++++G G    LGH +    L P  +  F   G+ V    AG 
Sbjct: 328 SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGG 387

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            H + L+  G V+++G G  G LGHG++ D+  P  LS+L+S   V
Sbjct: 388 SHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCV 433


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTS--AGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L +    Q
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQ 280



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 191

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 192 DLYGWGWGRYGNLGLGDRNDRLVPERVTS 220



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYGW 300

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  G
Sbjct: 301 GWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNG 358

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LG G+ +D+  P+ + +L
Sbjct: 359 QLGIGESVDRNFPKIIEAL 377



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +V+ I+AG S+ +A+    +V S+G G +  LGHG+  D   P  +      G  +V V+
Sbjct: 16  TVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL--DGHQIVSVT 73

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            G +H VA   SG  VY+WG G  G LGHG+  D   P P+ +L
Sbjct: 74  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 117



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 109 TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           TSAG  +++    G  HT+ +S S ++++ G S  G LGHG      +   ++   S + 
Sbjct: 219 TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSF 277

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQV 221
           + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   QV
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QV 333

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           + G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 334 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV 70


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CGS+  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 100

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 278 DSMNDEVNP 286



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LGH   T   V+  R I   +   ++QVS  
Sbjct: 88  VHVACGESHSLALSDQGQLFSWGAGSDGQLGH-TTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G N     G          P+ V++L+G+P  QV AG   +  L
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL 206

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 207 SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 265

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 324 ARGQLGTGHTCNVKCPSP---VKGHWA 347



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVV 246


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4084

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4143

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4200

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4258

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4296



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4146

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4205

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4264

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4265 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4321



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4025 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4084

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4142

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4143 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4181



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 126/286 (44%), Gaps = 21/286 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4132 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4190

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4191 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4247

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4248 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4305

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4306 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4352



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4185 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4243

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4244 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4299

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4300 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4358



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 4286



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4137 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4195

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4254

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4255 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4311



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4015 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4074

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4132

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4133 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4171



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4122 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4180

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4181 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4237

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4238 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4295

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4296 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4342



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4175 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4233

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4234 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4289

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4290 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4348

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4349 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4383


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 4301



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
           [Callithrix jacchus]
          Length = 4860

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVL-AGVVIEDVAVGAE 4300



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4269 GLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4185



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + LA+  NG
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASNG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4356



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4362



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 133/259 (51%), Gaps = 5/259 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLK 373
           LGHGD  D  +P  + +LK
Sbjct: 255 LGHGDFEDHLVPHKVEALK 273



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 5/210 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +Y WG G  G LG GD  D+ +PE +SS++
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVE 221



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 7/257 (2%)

Query: 112 GNMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           G   +  G  HT   S     V+S G    G LGHG  +T   +   +       + Q++
Sbjct: 67  GITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHG-NSTDVFTPQPVKALQGIKIKQLA 125

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             ++H   V  +G+V + G N +   G   T   +  P+ ++A +G+  K + AG   T 
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAFEGISVKMIAAGAEHTA 184

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T  G ++  G   +G LG GD  DR  P+ ++ +E    +V +A G  + + V+ +G 
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEG-DKMVLVACGWRHTITVSSSGS 243

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +Y++G      LGHG+  D L P  ++  +       ++S G  H +AL S G +Y WG 
Sbjct: 244 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDS--STSQISGGWRHTMALTSDGKLYGWGW 301

Query: 350 GYCGALGHGDEIDKTLP 366
              G +G GD  D   P
Sbjct: 302 NKFGQVGAGDNADHCSP 318



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 3/105 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F   GI    V 
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGI--TSVI 72

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G +H  A     + VY+WG G  G LGHG+  D   P+P+ +L+
Sbjct: 73  CGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQ 117



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 4/171 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP-EKVSSVEGDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 235 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           G ++  G N  GQ+G GD  D  +P  +   EE   V Q+A G  + LA T
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ-KVAQVACGWRHTLAFT 343


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
           paniscus]
          Length = 4798

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4026

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4027 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4085

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4142

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4200

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4201 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 4238



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4030 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4088

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 4089 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4147

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4148 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4206

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4207 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4263



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3967 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4026

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4027 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4084

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4085 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4123



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4074 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4132

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4133 NHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4189

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4190 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4247

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4248 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4294



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4127 QVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4185

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4186 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4241

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4242 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4300



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
          Length = 4861

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 4301



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 4293



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4143

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4144 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4202

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4261

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4262 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4318



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4022 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4081

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4139

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4140 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4178



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4129 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4187

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4188 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4244

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4245 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4302

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4303 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4349



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4182 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4240

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4241 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4296

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4297 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4355

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4356 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4390


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Pan troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 4301



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4198

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 4294



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4144

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4145 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4203

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4262

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4263 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4023 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4082

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4140

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4141 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4179



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4130 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4188

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4189 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4245

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4246 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4303

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4304 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4350



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4183 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4241

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4242 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4297

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4356

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4357 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4391


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 4301



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNIRQISAGRCHSAAWTAPPV 4363

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4364 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4398


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 4301



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNIRQISAGRCHSAAWTAPPV 4363

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4364 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4398


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
           mulatta]
          Length = 4824

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4052

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4053 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4111

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4168

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4226

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4227 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 4264



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4056 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4114

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4115 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4173

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4174 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4232

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4233 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4289



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3993 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4052

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4053 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4110

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4111 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4149



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4100 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4158

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4159 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4215

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4216 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4273

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4274 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4320



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4153 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4211

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4212 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4267

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4268 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4326

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4327 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4361


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
           boliviensis boliviensis]
          Length = 4860

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 4300



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV-HT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G V   
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4269 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4185



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G V   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4356



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4362


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4299



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4184



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4355



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4361



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4198

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 4294



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4144

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 4145 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4203

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4262

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4263 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4023 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4082

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4140

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4141 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4179



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4130 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4188

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4189 NHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4245

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4246 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4303

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4304 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4350



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4183 QVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4241

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4242 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4297

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4356



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 4301



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4364 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4398


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4078

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4079 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4137

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4194

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4252

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4290



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4082 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4140

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4141 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4199

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4200 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4258

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4259 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4315



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4019 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4078

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4079 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4136

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4137 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4175



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4126 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4184

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4185 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4241

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4242 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4299

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4300 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4346



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4179 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4237

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4238 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4293

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4294 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4352



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Equus caballus]
          Length = 4860

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4300



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ ++        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4269 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4185



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+  NG
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4362



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 117/240 (48%), Gaps = 14/240 (5%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
            H++ ++ S  VFS G    G LGHG       +  R   P     VVQ+S    H+A V 
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG-------NSDRQRRPXQGEEVVQMSCGFKHSAVVT 4144

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
              G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V 
Sbjct: 4145 SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4203

Query: 239  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
              G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG    
Sbjct: 4204 AFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRL 4262

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4263 IGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4320



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 20/279 (7%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RP      +G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPX-----QGEEVVQMSCGFKHSAV 4142

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4199

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4257

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 4295



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 9/159 (5%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +P        +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX-------QGEEVVQMSCGFKHSA 4141

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4142 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4180



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4131 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4189

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4190 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4246

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4247 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4304

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4305 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4351



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4184 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4242

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4243 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4298

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4299 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4357



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 134/299 (44%), Gaps = 39/299 (13%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           I  GR HTL + +  V+SCGS+  G LGH    ++     R++      + Q++  E H+
Sbjct: 129 IACGRAHTLFLVDGQVYSCGSNDQGQLGHKKHRSKP---ERVDALEPYTITQIACGETHS 185

Query: 176 AFVLQSGQVFTCGDNSSFCCG---HRDTNRP----------------------------- 203
             +  +GQVF  GDN +   G      + +P                             
Sbjct: 186 LALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMD 245

Query: 204 -IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            + RPRLV AL G    Q+  G NF+  L+ RG V   G NT GQL   +    P P  +
Sbjct: 246 FMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLV 305

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L  +  + Q+AAG  + LA+T NG VYS+G+     LG G+      P  ++T   + 
Sbjct: 306 KELYGI-PIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQ- 363

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
                ++ G++H V L  +G VY++G G  G LGHG   ++  P  +  L    A Q L
Sbjct: 364 -FCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVL 421



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 119/280 (42%), Gaps = 41/280 (14%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---------- 163
           QI  G  H+L L SN  VF+ G +    LG  P  +     TR + P  A          
Sbjct: 177 QIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDEL 236

Query: 164 -----------------------HVVQVSASENHAAFVLQSGQVFTCGDNSS-FCCGHRD 199
                                   +VQ+    N +  + + G VF  GDN+S   C    
Sbjct: 237 DAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLREL 296

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
              P+  P LV+ L G+P +Q+ AG   T  LT  G V++ G+N  GQLG GDT     P
Sbjct: 297 KTVPV--PTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIP 354

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             +  LE       IA G  + + +T  G VYSFG+G    LGHG   +E+ PR I  F 
Sbjct: 355 SRLKTLEH-QFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMI--FE 411

Query: 320 RKGIHVVRVSAGDEH-VVALDSSGYVYTWGKGYCGALGHG 358
             G    +V  G  H +V    +  +Y +G G  G LG G
Sbjct: 412 LMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTG 451


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 406 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 464

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 465 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 523

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 524 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 580

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 638

Query: 350 GYC 352
           G C
Sbjct: 639 GAC 641



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 697 QGNSTGPITKPKKVSGLDG-IAIQQIS 722



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 139/277 (50%), Gaps = 22/277 (7%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3627

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3628 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3686

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+            ++A G ++ LAV+ +G +
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSADGSM 3734

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 3735 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 3792

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
                 L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 3793 DRLIGLPEGRARNHNRPQQVPVL-AGVVIEDVAVGAE 3828



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 4/151 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3568 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 3627

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 3628 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 3685

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
             + S G ++T+G G  G LG G+  +K LPE
Sbjct: 3686 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE 3716



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 398 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 455

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 456 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 513

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 514 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 569

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 610



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 48/259 (18%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 3631 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 3689

Query: 181  SGQVFTCGD---------NSS-------FCCGHRDT------------------------ 200
             G++FT G+         N+S         CG   T                        
Sbjct: 3690 DGKLFTFGNGDYGRLGLGNTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLG 3749

Query: 201  -NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
             +     P+ V+ L G+  K+V  G  F+  LT  GHV+T G +    L  G   +   P
Sbjct: 3750 NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP 3809

Query: 260  KSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            + +  L   G V++ +A G  + LA+   G VY++GS S   LG G  +   +P  +   
Sbjct: 3810 QQVPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVL 3867

Query: 319  RRKGIHVVRVSAGDEHVVA 337
              +G +V ++SAG  H  A
Sbjct: 3868 --QGKNVRQISAGRCHSAA 3884



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            ++  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 3717 RVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 3775

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 3776 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 3831

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 3832 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 3890


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
           cuniculus]
          Length = 4860

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVL-AGVVIEDVAVGAE 4300



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4269 GLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4325



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4185



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + LA+   G
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASTG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4304 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4362



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
           mutus]
          Length = 4874

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 406 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 464

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 465 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 523

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 524 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 580

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 638

Query: 350 GYC 352
           G C
Sbjct: 639 GAC 641



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 146/286 (51%), Gaps = 19/286 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4091

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4092 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4150

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV-------VQIAAGPSYM 281
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G         +Q+A G ++ 
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHT 4210

Query: 282  LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL  
Sbjct: 4211 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTK 4268

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
             G+VYT+G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4269 DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4313



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 697 QGNSTGPITKPKKVSGLDG-IAIQQIS 722



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 17/249 (6%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4095 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4153

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----------VTAGLNFTGF 230
             G++FT G+      G  +T+     P  V AL+G    Q          V  GLN T  
Sbjct: 4154 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLA 4212

Query: 231  LTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            ++  G  V   G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G 
Sbjct: 4213 VSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGH 4271

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY+FG      L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG 
Sbjct: 4272 VYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGS 4329

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 4330 NSEGQLGLG 4338



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4032 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4091

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4092 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4149

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4150 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4188



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 126/286 (44%), Gaps = 21/286 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 338 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 392

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 393 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 452

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 453 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 508

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 509 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 564

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 565 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 610



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 21/238 (8%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFP--SAA 163
            +Q++ G  H+ ++ S+  +F+ G+   G LG G       PE    +   +I     +  
Sbjct: 4139 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTL 4198

Query: 164  HVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              +QV+   NH   V   G +   F  GD      G+         P+ V+ L G+  K+
Sbjct: 4199 FFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKK 4255

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPS 279
            V  G  F+  LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  
Sbjct: 4256 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAE 4313

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            + LA+   G VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4314 HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4369



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 11/181 (6%)

Query: 114  MQITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
            +Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+  
Sbjct: 4201 LQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACG 4259

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
               +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T
Sbjct: 4260 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHT 4315

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   
Sbjct: 4316 LALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPP 4374

Query: 289  V 289
            V
Sbjct: 4375 V 4375



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
           domestica]
          Length = 4790

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4018

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4019 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4077

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4134

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4192

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4193 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDIAVGAE 4230



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-VAIQQIS 724



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       V+Q+S    H+A V  
Sbjct: 4022 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAVVTS 4080

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4081 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4139

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4140 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4198

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  ++ G EH +AL S+G VY WG    G LG G
Sbjct: 4199 GLPEGRARNHNRPQQIPVL--AGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4255



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3959 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4018

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  V+++S G +H  
Sbjct: 4019 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVIQMSCGFKHSA 4076

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4077 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4115



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 13/233 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4066 IQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4124

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4125 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4181

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ IA G  + LA+   G
Sbjct: 4182 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDIAVGAEHTLALASTG 4239

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A  +S
Sbjct: 4240 DVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIR--QISAGRCHSAAWTAS 4290



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4119 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4177

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + +  G   T 
Sbjct: 4178 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDIAVGAEHTL 4233

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T + V
Sbjct: 4234 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITILQG-KNIRQISAGRCHSAAWTASPV 4292



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 7/260 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S + V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+ +   +V++ G       GH +++  +  P+ ++AL G+  +Q+  G +    +T+
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSS-DLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +
Sbjct: 131 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGW 189

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G
Sbjct: 190 GWGRYGNLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 247

Query: 354 ALGHGDEIDKTLPEPLSSLK 373
            LGHGD  D+ +P  L +L+
Sbjct: 248 QLGHGDFEDRLVPHRLEALR 267



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 10  VLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 68

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +   R  V++ G    G+LGHG++ D  TPK I  L  +  + QIA G S+ LA
Sbjct: 69  ADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGL-KIRQIACGDSHCLA 127

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI +  V+AG EH  A+   G 
Sbjct: 128 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--EGISIKMVAAGAEHTAAVTEDGE 185

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           ++ WG G  G LG GD  D+ +P+ +SS+     V
Sbjct: 186 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMV 220



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAE 175

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G++F  G       G  D N  +  P+ V ++ G     V  G   T  ++ 
Sbjct: 176 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSS 234

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  DR  P  +  L    ++ QI+ G  + +A+T +G +Y +
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGW 293

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  IQ    +   V+++S G  H +A+     V++WG+G  G
Sbjct: 294 GWNKFGQVGAGDNIDHCSP--IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNG 351

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGHG+ +D+  P  L +L
Sbjct: 352 QLGHGESVDRNTPMILEAL 370



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 170 VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 228

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH D    +  P  +EAL+G    Q++ G   T  LT  
Sbjct: 229 TISVSSLGGLYTYGWSKYGQLGHGDFEDRLV-PHRLEALRGDNISQISGGWRHTMALTTD 287

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    V+S+
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQNVFSW 345

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P  ++     G
Sbjct: 346 GRGTNGQLGHGESVDRNTPMILEALSVDG 374


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
           garnettii]
          Length = 4828

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4056

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4057 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4115

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4172

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4230

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4268



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4118

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4119 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4177

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4178 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4236

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4237 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4293



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3997 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4056

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4057 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4114

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4115 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4153



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4104 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4162

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4163 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4219

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+  NG
Sbjct: 4220 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNG 4277

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4278 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4324



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4157 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4215

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4216 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4271

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4272 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4330



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Meleagris gallopavo]
          Length = 4334

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3562

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3563 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3621

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSMDG 3678

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 3736

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L S + ++ ++V AE
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVL-SGVFIEDIAVGAE 3774



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 3566 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 3624

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 3625 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWA 3683

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 3684 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 3742

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ +  ++ G EH +AL S+G VY WG    G LG G
Sbjct: 3743 GLPEGRARNHNRPQQVPVL--SGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 3799



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 127/257 (49%), Gaps = 16/257 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSL 372
            G+     T P+ +S L
Sbjct: 699 QGNSTGPITKPKKVSGL 715



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 10/194 (5%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++  G +       R+   P+  P   +A      +QV  G N T  +   G V  CG  
Sbjct: 3474 LWGAGRHGQLAEAGRNVMVPVAAPSFSQA------QQVVCGQNCTFVIQANGTVLACGEG 3527

Query: 244  THGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            ++G+LG G++ D      I+ L+   V  +V       + +A+T +G V+S+G G    L
Sbjct: 3528 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 3587

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            GHG    + +PR I+    +G  VV++S G +H   + + G ++T+G G  G LG G+  
Sbjct: 3588 GHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTS 3645

Query: 362  DKTLPEPLSSLKSH 375
            +K LPE +++L+ +
Sbjct: 3646 NKKLPERVTALEGY 3659



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 3610 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 3668

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 3669 NHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 3725

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  V  +  IA G  + LA++  G 
Sbjct: 3726 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGV-FIEDIAVGAEHTLALSSTGD 3784

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 3785 VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 3830



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT+ +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 3663 QVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGT 3721

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + +  G   T 
Sbjct: 3722 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLSGVFIEDIAVGAEHTL 3777

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T   V
Sbjct: 3778 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTAPPV 3836


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Pongo abelii]
          Length = 4864

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4208

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQI-PLLAGVIIEDVAVGAE 4304



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4154

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4155 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4213

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4272

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4273 GLPEGRARNHNRPQQIPLL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4329



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4033 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4092

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4150

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4151 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4189



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4140 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4198

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4199 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4255

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4256 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLL--AGVIIEDVAVGAEHTLALASNG 4313

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4314 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4360



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4193 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4251

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4252 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPLLAGVIIEDVAVGAEHTL 4307

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4308 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4366


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L +    Q
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQ 269



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 63

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 122

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 180

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 181 DLYGWGWGRYGNLGLGDRTDRLVPERVTS 209



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGFRHTMALTSDGKLYG 288

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV 59


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
           africana]
          Length = 4858

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIRKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4086

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4087 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4145

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSSDG 4202

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4260

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4298



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4090 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4148

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4149 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWA 4207

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4208 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4266

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4267 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4323



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4027 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4086

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4087 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4144

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4145 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4183



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 123/285 (43%), Gaps = 19/285 (6%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    L+     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PLVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             +++ V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIRKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4134 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4192

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4193 NHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4249

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4250 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4307

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4308 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4354



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S+  S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4187 QVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4245

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4246 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4301

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4302 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4360



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
           gorilla gorilla]
          Length = 4502

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3730

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3731 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3789

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 3846

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 3904

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 3942



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 3734 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 3792

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 3793 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 3851

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 3852 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 3910

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 3911 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 3967



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3671 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 3730

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 3731 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 3788

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 3789 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 3827



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 3778 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 3836

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 3837 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 3893

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 3894 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 3951

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 3952 DVYAWGSNSEGQLGLGHTNHVREPTVVTGL--QGKNVRQISAGRCHSAA 3998



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 236
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG    L +T     R H
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDREH 742



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 3831 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 3889

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 3890 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 3945

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 3946 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQG-KNVRQISAGRCHSAAWTAPPV 4004


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 79

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 138

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 139 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 255

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L +    Q
Sbjct: 256 QLGHGDLEDHLIPHKLEALSNSFISQ 281



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 18  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 75

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 76  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 134

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 135 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 192

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 193 DLYGWGWGRYGNLGLGDRTDRLVPERVTS 221



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 183

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 184 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 241

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 242 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYG 300

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 301 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 358

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 359 GQLGIGESVDRNFPKIIEAL 378



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 178 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 236

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 237 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 353

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGIGESVDRNFPKIIEALSVDG 382



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 230 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 288

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 289 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 344

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 345 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 386



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 18  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV 71


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 133/259 (51%), Gaps = 5/259 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLK 373
           LGHGD  D  +P  + +LK
Sbjct: 255 LGHGDFEDHLVPHKVEALK 273



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 107/215 (49%), Gaps = 5/215 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +Y WG G  G LG GD  D+ +PE +SS++    V
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV 226



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 20/266 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           Q+  G  H L ++ +  V S G +  G LG G       P+T Q  +F  I+      V 
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQ--AFEGIS------VK 174

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            ++A   H A V + G ++  G       G  D N   F P  V +++G     V  G  
Sbjct: 175 MIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDR-FVPEKVSSVEGDKMVLVACGWR 233

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  ++  G ++T G + +GQLGHGD  D   P  +  L++  S  QI+ G  + +A+T 
Sbjct: 234 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-SSTSQISGGWRHTMALTS 292

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G +Y +G      +G G+  D   P  +     +   V +V+ G  H +A      V+ 
Sbjct: 293 DGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ--KVAQVACGWRHTLAFTEKKNVFA 350

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
           WG+G  G LGHG+ +D+  P  + +L
Sbjct: 351 WGRGTSGQLGHGEIVDRNTPVIIDAL 376



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP-EKVSSVEGDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 235 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P  +   EE   V Q+A G  + LA T    V+++G
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ-KVAQVACGWRHTLAFTEKKNVFAWG 352

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHGE  D   P  I      G
Sbjct: 353 RGTSGQLGHGEIVDRNTPVIIDALSPDG 380



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F   GI    V 
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGI--TSVI 72

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G +H  A     + VY+WG G  G LGHG+  D   P+P+ +L      QG+ +    C
Sbjct: 73  CGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKAL------QGIKIKQLAC 126


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
           gallus]
          Length = 4860

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L S + ++ ++V AE
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVL-SGVFIEDIAVGAE 4300



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ +  ++ G EH +AL S+G VY WG    G LG G
Sbjct: 4269 GLPEGRARNHNRPQQVPVL--SGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 4325



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +++Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-VSIQQIS 724



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 10/194 (5%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++  G +       R+   P+  P   +A      +QV  G N T  +   G V  CG  
Sbjct: 4000 LWGAGRHGQLAEAGRNVMVPVAAPSFSQA------QQVVCGQNCTFVIQANGTVLACGEG 4053

Query: 244  THGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            ++G+LG G++ D      I+ L+   V  +V       + +A+T +G V+S+G G    L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            GHG    + +PR I+    +G  VV++S G +H   + + G ++T+G G  G LG G+  
Sbjct: 4114 GHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTS 4171

Query: 362  DKTLPEPLSSLKSH 375
            +K LPE +++L+ +
Sbjct: 4172 NKKLPERVTALEGY 4185



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  V  +  IA G  + LA++  G 
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGV-FIEDIAVGAEHTLALSSTGD 4310

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 4311 VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4356



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT+ +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + +  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLSGVFIEDIAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T   V
Sbjct: 4304 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTAPPV 4362


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4310



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4160

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4161 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4219

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4278

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4279 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4039 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4098

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4156

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4157 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4195



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4146 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4204

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4205 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4262 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4319

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4320 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4366



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4199 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4257

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4258 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4313

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4314 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4372


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4299



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4184



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Cricetulus griseus]
          Length = 4859

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4299



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4184



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4299



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4184



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L +    Q
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQ 269



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 63

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 122

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 180

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 181 DLYGWGWGRYGNLGLGDRTDRLVPERVTS 209



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYG 288

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 218 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 276

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 277 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 332

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 333 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 374



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV 59


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4299



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4184



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Ornithorhynchus anatinus]
          Length = 4866

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4094

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4153

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4210

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4268

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVL-AGVVIEDVAVGAE 4306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ ++        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-VAIQQIS 724



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4098 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4156

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4157 DGKMFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWA 4215

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4216 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4274

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ +  V+ G EH +A+ S+G VY WG    G LG G
Sbjct: 4275 GLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLG 4331



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4035 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4094

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4152

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + + G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4153 VVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4191



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 126/286 (44%), Gaps = 21/286 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4142 VQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4200

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4201 NHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4257

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + LA+T  G
Sbjct: 4258 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLAITSTG 4315

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 4316 DVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4362



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4195 QVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4253

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 4254 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 4309

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             +T  G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T   V
Sbjct: 4310 AITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTAPPV 4368



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 345 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 403

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 404 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSLPREIESLK 462

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 463 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRV 522

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L+E  +  Q+A G S  +A++  G VY+ GS     LG+  Q D   P  ++    K 
Sbjct: 523 VTLDEP-NFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGN-TQADGKLPTPVEGKLSKS 580

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 581 F-VEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALK 630



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 21/224 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HAA V + G+VF+ G  S    GH  D++ P   P+L+E+L     + V  
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 364

Query: 224 GLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 280
           G   T  +T+ G ++T G  T  +G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 423

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 338
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 481

Query: 339 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                      SSG ++TWG G  G LGHGD+  K +P  + +L
Sbjct: 482 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTL 525



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 91/175 (52%), Gaps = 4/175 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 356 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 413

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           V  +S G  H   + SSG ++T+G G  G LGHGD    +LP  + SLK    VQ
Sbjct: 414 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQ 468



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            H  GSN       G  +D   PK++     V  V  IA G  +   VT  G V+S+G  
Sbjct: 280 AHHVGSN------FGVKMDSLLPKALESAV-VLDVQNIACGGEHAAMVTKQGEVFSWGGE 332

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GA 354
           S   LGHG   D   P+ I++     I +V  + G+ H  A+  SG +YTWG G    G 
Sbjct: 333 SGGRLGHGVDSDVPHPKLIESLSNTNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNYGL 390

Query: 355 LGHGDEIDKTLPE 367
           LGHG+++   +P+
Sbjct: 391 LGHGNQVSHWVPK 403



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ +S    V++ GS + G LG+     +  +       S + V +++    
Sbjct: 532 QVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKL-SKSFVEEIACGAY 590

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +VFT G  ++ C GH DTN     P LVEALK    K +  G NFT  + +
Sbjct: 591 HVAVLTSRTEVFTWGKGANGCLGHGDTND-RNTPTLVEALKDKQVKSIACGTNFTAAICL 649

Query: 234 RGHV 237
              V
Sbjct: 650 HKWV 653


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4301



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 132/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD   +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 21/286 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G +        
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM 398

Query: 156 RINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
            ++F  A    Q   +  +  FV+ + G V  CG  S    G  D+N      +  F P 
Sbjct: 399 ALSFSDA----QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4357



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4363



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++    +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L +    Q
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQ 280



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 191

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 192 DLYGWGWGRYGNLGLGDRTDRLVPERVTS 220



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYG 299

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV 70


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 124/245 (50%), Gaps = 15/245 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           V++CG +  G LG G   ++ V +  R +      V  V+   +++  V+ +GQV +CG 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVV-AGQVASCGK 92

Query: 190 NSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           N     GH  RD       PR+VE L+GV    V A    T  L  RG V++ G    GQ
Sbjct: 93  NVHGQLGHGGRDEET---APRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQ 149

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHG     P P+ IA L    SVV + AG ++ LA+  +G VYS+G G +  LGHG++ 
Sbjct: 150 LGHGAFEAVPHPRRIARLPT--SVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRR 207

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG---KGYCGALGHGDEIDKT 364
            +L PRA++ F+ +      VS G  H   + + G + TWG    G CGA   GD +   
Sbjct: 208 RQLAPRAVEFFKTR--PAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPA 265

Query: 365 -LPEP 368
            +P P
Sbjct: 266 EVPLP 270



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 184 VFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           V+ CG N++    CG R++    +R R     KG     V  G +++  + + G V +CG
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGR-VDGVACGSSYS-VVVVAGQVASCG 91

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N HGQLGHG   +   P+ +  L  V  VV +AA  ++ LA+   G VYS+G G    L
Sbjct: 92  KNVHGQLGHGGRDEETAPRVVEGLRGV-RVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG       PR I    R    VV V AG  H +ALD+ G VY+WG G  GALGHGD  
Sbjct: 151 GHGAFEAVPHPRRIA---RLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRR 207

Query: 362 DKTLPEPLSSLKSHLA 377
            +  P  +   K+  A
Sbjct: 208 RQLAPRAVEFFKTRPA 223



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 102/260 (39%), Gaps = 25/260 (9%)

Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL + +   V+S G    G LGHG    + V   R        VV V A   H+  +  
Sbjct: 129 HTLALDDRGRVYSWGRGDEGQLGHG--AFEAVPHPRRIARLPTSVVAVGAGRTHSLALDA 186

Query: 181 SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            G V++  CGD+ +   GH D  R +  PR VE  K  P   V+ G      +T  G + 
Sbjct: 187 DGAVYSWGCGDDGAL--GHGDRRRQL-APRAVEFFKTRPAAAVSCGSRHNAVVTADGALV 243

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVT---GNGVVYSF 293
           T G   +GQ G     D   P  + PL   G    V  A G  + L  T       +++F
Sbjct: 244 TWGWAAYGQCGASAGGDGLRPAEV-PLPGDGGAECVLAACGYRHTLCATRHASGDAIWAF 302

Query: 294 GSGSNFCLGHGEQHDELQPRAI------QTFRRKGIHVVRVSAGDEH---VVALDSSG-Y 343
           G  +    G G       PR +            G  V  +SAG  H    V L   G  
Sbjct: 303 GWNAYGQCG-GSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRHSVCCVRLPGGGTA 361

Query: 344 VYTWGKGYCGALGHGDEIDK 363
            Y WG+G  G LG GD  D+
Sbjct: 362 TYAWGRGDDGQLGSGDRRDR 381



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 10/244 (4%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           +  G  +++++    V SCG ++ G LGHG    +      +       VV V+A   H 
Sbjct: 72  VACGSSYSVVVVAGQVASCGKNVHGQLGHGGRDEETAPRV-VEGLRGVRVVAVAARGAHT 130

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
             +   G+V++ G       GH      +  PR +  L       V AG   +  L   G
Sbjct: 131 LALDDRGRVYSWGRGDEGQLGH-GAFEAVPHPRRIARLP-TSVVAVGAGRTHSLALDADG 188

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V++ G    G LGHGD   +  P+++    +      ++ G  +   VT +G + ++G 
Sbjct: 189 AVYSWGCGDDGALGHGDRRRQLAPRAVE-FFKTRPAAAVSCGSRHNAVVTADGALVTWGW 247

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV-----ALDSSGYVYTWGK- 349
            +    G     D L+P  +      G   V  + G  H +     A   + + + W   
Sbjct: 248 AAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAY 307

Query: 350 GYCG 353
           G CG
Sbjct: 308 GQCG 311


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-PIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L +    Q
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQ 280



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIPIKMVAAGAEHTAAVTEDG 191

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 192 DLYGWGWGRYGNLGLGDRTDRLVPERVTS 220



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 55/311 (17%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 70  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG-NSSDLFTPLPIKALHGIRIKQIACG 128

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   G+V + G N +   G  DT   +  P+ ++A +G+P K V AG   T  +
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIPIKMVAAGAEHTAAV 187

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ +        +  +A G  + ++V+ +G +Y
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-KMSMVACGWRHTISVSYSGALY 246

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQT--------------------------------FR 319
           ++G      LGHG+  D L P  ++                                 F 
Sbjct: 247 TYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFG 306

Query: 320 RKGI------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           + G+                   VV+VS G  H +A+     V+ WG+G  G LG G+ +
Sbjct: 307 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESV 366

Query: 362 DKTLPEPLSSL 372
           D+  P+ + +L
Sbjct: 367 DRNFPKIIEAL 377



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV 70


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 410 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 468

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 469 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 527

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 528 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 584

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 585 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 642

Query: 350 GYC 352
           G C
Sbjct: 643 GAC 645



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 146/279 (52%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4180

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4181 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4239

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +A LE  ++G   ++A G ++ L V+ +G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIG---EVACGLNHTLVVSTDG 4296

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4354

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ + +L S + V+ ++V AE
Sbjct: 4355 GQDRLIGLPEGRARNHNRPQQVPAL-SGVFVEDIAVGAE 4392



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 529

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 530 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 585

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 586 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 644

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 645 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 700

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 701 QGNSTGPITKPKKVSGLDG-VAIQQIS 726



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4184 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4242

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    +V  GLN T  ++  G  V  
Sbjct: 4243 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWA 4301

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4302 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4360

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ V  ++ G EH +AL +SG VY WG    G LG G
Sbjct: 4361 GLPEGRARNHNRPQQVPAL--SGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLG 4417



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4121 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4180

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4181 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4238

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + + G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4239 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGY 4277



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 123/285 (43%), Gaps = 18/285 (6%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 341 FEEVCRMASDYSRTCASPDSIQTGGDAPVVSETCEVYVWGSNSSHQLVEG---TQEKILQ 397

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 398 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 456

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 457 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 513

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 514 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 569

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 570 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 614



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 11/231 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + +V+   
Sbjct: 4228 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVAALEGYQIGEVACGL 4286

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4287 NHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 4343

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  V  V  IA G  + LA++ +G 
Sbjct: 4344 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGV-FVEDIAVGAEHTLALSASGD 4402

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            VY++GS S   LG G  +   +P  + + + K +   ++SAG  H  A  S
Sbjct: 4403 VYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVR--QISAGRCHSAAWSS 4451



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 631 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 688

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 689 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 728


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Ailuropoda melanoleuca]
          Length = 4861

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4301



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4357



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4363



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  113 bits (283), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 81/289 (28%), Positives = 146/289 (50%), Gaps = 23/289 (7%)

Query: 98  QSVEHSSDIVETSAGN------MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT- 149
           Q VE + D + T   N      +Q+  G+Y T  L  + S+ +CG    G LG G  ++ 
Sbjct: 349 QLVEGNKDKILTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSK 408

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           QC+    +   +   +     S++H   + ++G V++ GD      GH +    +   +L
Sbjct: 409 QCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGN----VATQKL 464

Query: 210 VEALKGVPCKQV----TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            + ++GV   Q+    +AG   +  +T  G ++T G   HG+LGHGD+  +  P  +   
Sbjct: 465 PKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLV--- 521

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             + +  Q+AAG S+ + ++ + + V++FG+G N  LGHG    E  P+ +     KGI 
Sbjct: 522 RSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDAL--KGIR 579

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           + +++AG +  +AL  +G++Y WG G C  +G  D +   LP+ + SL+
Sbjct: 580 IKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAV-HLLPKIVESLR 627



 Score =  103 bits (257), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 153/328 (46%), Gaps = 39/328 (11%)

Query: 48  LYPQK---FRSLVDLAASQLC--------ALHSIYAGMSRNVQIELLNRCNGNWKRVLRF 96
           L P+K   F++ + L A Q C        +LH+   G         L   + + K+ L  
Sbjct: 359 LTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGKGSHGK-----LGLGDSSSKQCLHK 413

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           L     + D + +S G+        HTL L  N  V+S G    G LGHG   TQ +   
Sbjct: 414 LNLFNQNIDQISSSKGSDS------HTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKV 467

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALK 214
                    +  +SA   H+A + + G ++T G+      GH D++  I R P LV ++ 
Sbjct: 468 IRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSS--IQRVPTLVRSID 525

Query: 215 GVPCKQVTAGLNFTGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                QV AG + T  L+     V T G+  +G+LGHG+T     PK +  L+ +  + +
Sbjct: 526 AA--SQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGI-RIKK 582

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGD 332
           IAAG    +A+T  G +Y +G G   CLG G      L P+ +++ R   +H+V +S GD
Sbjct: 583 IAAGTQCSIALTWTGFIYVWGCGP--CLGVGAADAVHLLPKIVESLR--DVHIVDISLGD 638

Query: 333 EHVVALDSSGYVYTWGK---GYCGALGH 357
            H +AL +   VY+WG    G CG LGH
Sbjct: 639 CHCLALSADHEVYSWGNNNMGQCG-LGH 665



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +++   +  GSN+  QL  G+     TPK     +   + +Q+ AG     A+  +G ++
Sbjct: 334 SLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFK---NAIQLEAGQYCTFALFDDGSLH 390

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G GS+  LG G+   +     +  F +    +      D H +AL  +G VY+WG G 
Sbjct: 391 ACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGE 450

Query: 352 CGALGHGDEIDKTLPE 367
            G LGHG+   + LP+
Sbjct: 451 FGKLGHGNVATQKLPK 466


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 122/264 (46%), Gaps = 19/264 (7%)

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G+LG G E TQ V           HV  VS    H A V  +GQ+FT GD +    GH D
Sbjct: 355 GLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 414

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQ 247
            +  +  PR VE+LKG+   +V  G+  T  +               G + T G    G+
Sbjct: 415 RSS-VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 473

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHGD   R  P  +A L E  S  Q+A G S  +A+T +G VY+ GS     LG+  Q 
Sbjct: 474 LGHGDKEARLVPTYVATLVEP-SFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQA 531

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   P  ++    K   V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P 
Sbjct: 532 DGKVPTRVEGKLMKNF-VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 590

Query: 368 PLSSLKSHLA---VQGLSVLAEVC 388
            + +LK       + G S  A +C
Sbjct: 591 IVEALKDKQVKGIICGTSFTAAIC 614



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 331

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              +  +T+ G ++  G N +  G LG G    +  P+ ++ PLE +  V  ++ GP + 
Sbjct: 332 EYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGI-HVSSVSCGPWHT 390

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  +RV+ G  H  A+   
Sbjct: 391 AVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESL--KGLRTMRVACGVWHTAAVVEV 448

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                     SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 449 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATL 491



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           G  D     F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D
Sbjct: 251 GGSDIQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD 310

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPR 313
              PK +  L+   +V  +A G     AVT +G +Y +G  + NF  LG G +  +  PR
Sbjct: 311 VSHPKFVDGLKNF-NVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPR 369

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            + +   +GIHV  VS G  H   + S+G ++T+G G  G LGHGD    + P  + SLK
Sbjct: 370 KL-SGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLK 428



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASE 172
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    V  TR+      + V+ ++   
Sbjct: 498 QVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQADGKVP-TRVEGKLMKNFVEELACGA 555

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +    +V+T G  ++   GH DT+   F P +VEALK    K +  G +FT  + 
Sbjct: 556 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSIVEALKDKQVKGIICGTSFTAAIC 614

Query: 233 IRGHV 237
           +   V
Sbjct: 615 LHKWV 619


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Felis catus]
          Length = 4861

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4301



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4186



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 126/286 (44%), Gaps = 21/286 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4357



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4363



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4310



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-IAIQQIS 724



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4160

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4161 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4219

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4278

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4279 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4039 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4098

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4156

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4157 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4195



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4146 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4204

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4205 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4262 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4319

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4320 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4366



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4199 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4257

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4258 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4313

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4314 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4372



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 13/253 (5%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +  T A    I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     
Sbjct: 408 LAATFADAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRA 466

Query: 165 VVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQ 220
           + +VS+S   + H       G+VF+ GD      GH +++   + P+L++  L+G     
Sbjct: 467 IKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVC 525

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG   +  ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+
Sbjct: 526 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSH 582

Query: 281 MLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +A++ +G  V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL 
Sbjct: 583 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALT 640

Query: 340 SSGYVYTWGKGYC 352
           S+G VY WG G C
Sbjct: 641 STGQVYAWGCGAC 653



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 131/267 (49%), Gaps = 20/267 (7%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 593

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 652

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 653 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 708

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            G+        P++  K  + + G+++
Sbjct: 709 QGNSTG-----PITKPKKVVGLDGVAI 730



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 16/195 (8%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 422 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 478

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 479 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 344
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 593

Query: 345 YTWGKGYCGALGHGD 359
           +++G G  G LGHGD
Sbjct: 594 WSFGGGDNGKLGHGD 608



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 639 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 696

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 697 YAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAG 736



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   TF         + AG      + S G V   GK
Sbjct: 384 VYVWGSNSSHQLVEGTQEKILQPKLAATF----ADAQTIEAGQYCTFVISSDGSVRACGK 439

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           G  G LG GD  +++  + L + + H A++ +S
Sbjct: 440 GSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVS 471


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 132/269 (49%), Gaps = 19/269 (7%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  VF+CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVEAL+    + +  G + +  ++ +G ++T G  
Sbjct: 3021 FSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3078

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFC 300
             +G+LGHGD   +  PK +  L   GS V+Q+A G   +  LA+T +G V+S+G G    
Sbjct: 3079 EYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGK 3136

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LG G       P  I+  R  GI VV++  G +  +AL  +G V+TWGKG    LGHG +
Sbjct: 3137 LGRGGSEGSATPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD 3194

Query: 361  IDKTLPEPLSSLKS----HLAVQGLSVLA 385
                 P+P++ L+     H+AV  L  LA
Sbjct: 3195 QHVRKPQPIAGLRGRRVIHVAVGALHCLA 3223



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  ++   +H+A 
Sbjct: 3008 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDIACGSSHSAA 3065

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3066 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDG 3124

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 3125 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3183

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3184 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3241

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3242 GSGNTFVNKKP 3252



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4160 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRLSYDRPKLLEHLNGMSVADIACG 4217

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4277

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4278 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4335

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 4336 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4365



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4162 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----LSYDRPKLLEHLNGMSVADIACG 4217

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4276

Query: 232  TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4277 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4335

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYTWG 
Sbjct: 4336 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYTWGD 4393

Query: 350  GYCGALGHGDEIDKTLPEPLSSLK 373
               G LG G       P  +++L+
Sbjct: 4394 NDEGQLGDGTVTAIQRPRLVAALQ 4417



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 17/177 (9%)

Query: 185 FTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +  GDN     GH D +    P     LV  +K V C     G +++  +T+RG+++T G
Sbjct: 665 WGTGDNRRL--GHGDCHSRELPTKIESLVRRVKSVYC-----GCSYSAAITLRGNLYTWG 717

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
              +G+LGHG + D+  P  +  L++   V V + +G ++ L +T  G+VY++G G    
Sbjct: 718 RGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGK 777

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           LG+   +  LQP  I+   R    V RV AG +  +AL   G +Y+WGK  C  LGH
Sbjct: 778 LGNASCNSSLQPLLIECLPR----VQRVFAGSQFSLALTGEGQLYSWGKASC--LGH 828



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4070 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4128

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4129 YGSGGRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4187

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ L    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4188 KLGHGNRLSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4246

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4247 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4306

Query: 367  EPLSSLKSHLAVQGLSVLAEVC 388
              + SL       GL V+   C
Sbjct: 4307 YKIESLA------GLGVIKVEC 4322



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 14/209 (6%)

Query: 178  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 2960 VSQDGKVFACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3017

Query: 235  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3018 GKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3074

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 350
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3075 WGLGEYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              G LG G       P  +  L     VQ
Sbjct: 3133 DFGKLGRGGSEGSATPHEIERLSGIGVVQ 3161



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 2/123 (1%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + ++ G+  + +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 661 NAYSWGTGDNRRLGHGDCHSRELPTKIESL--VRRVKSVYCGCSYSAAITLRGNLYTWGR 718

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G+   LGHG   D+  P  +   +   +  V + +GD H + L + G VY WG G  G L
Sbjct: 719 GNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKL 778

Query: 356 GHG 358
           G+ 
Sbjct: 779 GNA 781



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV  N   YS+G+G N  LGHG+ H    P  I++  R+   V  V  G  +  A+ 
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRR---VKSVYCGCSYSAAIT 708

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G +YTWG+G  G LGHG   D+ LP  + +LK H  V
Sbjct: 709 LRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVV 747



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 30/244 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+   + +N + +S G+     LGHG        T+  S  R        V  V    +
Sbjct: 650 GRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-------RVKSVYCGCS 702

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +   G ++T G  +    GH  ++     P +V ALK      V   +G   T  L
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCL-PTMVMALKDHQVVDVALGSGDAHTLCL 761

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGV 289
           T  G V+  G   +G+LG+          S+ PL  E +  V ++ AG  + LA+TG G 
Sbjct: 762 TNEGLVYAWGDGDYGKLGNASC-----NSSLQPLLIECLPRVQRVFAGSQFSLALTGEGQ 816

Query: 290 VYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           +YS+G  S  CLGH      +Q    PR I + + K   +V V+ G  H +AL S+G ++
Sbjct: 817 LYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHK--RIVDVAVGVTHCLALSSAGEIF 872

Query: 346 TWGK 349
            WG+
Sbjct: 873 GWGR 876



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  IS+   +++ G    G LGHG   TQ +    +     + V+QV+     
Sbjct: 3056 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVTALCGSRVIQVACGSRD 3114

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3115 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSATPHEIERLSGIGVVQIECGAQFSLALT 3173

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ IA L     V+ +A G  + LAVT  G VY+
Sbjct: 3174 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3232

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3233 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSMA 3275



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G V++ 
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVFAC 2969

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L++
Sbjct: 3030 KLGHGNRTTLDKPRLVEALRA 3050



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 17/168 (10%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4063 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4114

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4115 LFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4174

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G VY WG+G  G LGHG+ +    P+ L  L       G+SV    C
Sbjct: 4175 DGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLN------GMSVADIAC 4216



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 4/169 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  +V+S G    G LG G  +  C    +I   +   V++V      + 
Sbjct: 4270 SGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGLGVIKVECGSQFSV 4328

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RP+ V AL+G     +  G       +  G 
Sbjct: 4329 ALTKSGAVYTWGKGDFHRLGHGSVDH-VRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4387

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            V+T G N  GQLG G       P+ +A L+    +V++  G ++ LA++
Sbjct: 4388 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-KHIVKVTCGSAHTLALS 4435


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 9/254 (3%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +  V++ GS   G LGH  ++ + +    +      ++V+VS   NH A + + G ++  
Sbjct: 109 DGDVYTWGSGEYGKLGHNDDSNENLP-RLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCW 167

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G  +S   G       +F PRL++  L+      V+ G + T  +T +G V T G+   G
Sbjct: 168 GRAASAGSG---GTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEG 224

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           +LGHG+   +  PK +  L E   VV +A G  + + V  +G+ YS G+     LG G  
Sbjct: 225 ELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTIFVCESGL-YSCGADDYGQLGLGRS 281

Query: 307 HDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           H E   +  ++    G+  VV +SAGD HV AL   G VYTWG G  G LGHG++ D +L
Sbjct: 282 HGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSL 341

Query: 366 PEPLSSLKSHLAVQ 379
            +P+ +L++   VQ
Sbjct: 342 AKPVDNLRNFEIVQ 355



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 119/217 (54%), Gaps = 16/217 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VS   +H A V + G+V+T G+      GH + N   ++P+ V++L       V  G
Sbjct: 196 VISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQ-YQPKKVQSLT-EKVVDVACG 253

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +FT F+   G +++CG++ +GQLG    HG+   + TP+S++    +  VV I+AG  +
Sbjct: 254 RDFTIFVCESG-LYSCGADDYGQLGLGRSHGERFVQ-TPRSLSGTG-LSDVVAISAGDYH 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + A+  +G+VY++G G    LGHGE+ D    + +   R     +V+V+ G  H  A+  
Sbjct: 311 VCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRN--FEIVQVACGGGHTAAVTK 368

Query: 341 SGYVYTWGKGYCGALGHGDEID-----KTLPEPLSSL 372
            G +YTWG+G  G LG G E++     +T P  ++SL
Sbjct: 369 DGVLYTWGRGRDGQLGRGGELESIASYRTSPVQVTSL 405



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           RP  RP  VEAL G     V AG + T  +++ G V+T GS  +G+LGH D  +   P+ 
Sbjct: 77  RPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRL 136

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L+   ++V+++ G ++M A+  +G +Y +G  ++   G G       PR I+    K
Sbjct: 137 VEALKGK-NIVKVSIGGNHMAAIDKDGHLYCWGRAAS--AGSGGTEHVFIPRLIKGDLEK 193

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              V+ VS G  H  A+   G V+TWG GY G LGHG++  +  P+ + SL
Sbjct: 194 -EKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSL 243



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G +    +P  ++     G  +V V+AGD    A+   G VYTWG G  G LGH D+
Sbjct: 71  LGQGHERPADRPFPVEAL--SGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDD 128

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            ++ LP  + +LK    V+
Sbjct: 129 SNENLPRLVEALKGKNIVK 147


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 187
             +++CG    G LG G ++  C     I F S   + +VS      HA  + Q G+VF+ 
Sbjct: 2987 KLYACGEGTNGRLGLGDDSNVCEP-KPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSW 3045

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+
Sbjct: 3046 GEGEDGKLGHGNSIS-LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  ++QIA G   +  +A+T +G+VYS+G G    LG G
Sbjct: 3105 LGHGDTATQSKPKLVQSL--VGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3162

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++    
Sbjct: 3163 GSDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVR 3220

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P  +  L+     H+AV  L  LA
Sbjct: 3221 KPTLVEGLRGKKVIHVAVGALHCLA 3245



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 3030 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 3085

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 3086 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRIIQIACGSRDAQTMALTA 3144

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3145 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3203

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+   G VY WG    G
Sbjct: 3204 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDIGQVYAWGDNDHG 3261

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3262 QQGNGTTIVNKKP 3274



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 17/265 (6%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3992 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 4048

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 4049 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 4106

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   V+ +A  +G +  L VT + 
Sbjct: 4107 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY-KVIDVACGSGDAQTLCVTDDD 4165

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG +YTWG
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVVKVECGSQFSVALTRSGAIYTWG 4223

Query: 349  KGYCGALGHGDEIDKTLPEPLSSLK 373
            KG    LGHG +     P  +++L+
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQ 4248



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 4031 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4080

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+L+E
Sbjct: 4081 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIE 4139

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4140 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4199

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4200 -VVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4256

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4257 TGSLHCVACTDKGEVFTWGDNDEGQLGDG 4285



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 3/177 (1%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2955 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 3014

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 3015 FLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 3074

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q
Sbjct: 3075 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQ 3129



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 6/215 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3984 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 4042

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 4100

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 4101 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 4160

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +     V++WG G  G LG G      +P  + SL
Sbjct: 4161 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL 4195



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3977 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQ 4036

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 4037 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEI 4094

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++ G  H  A+ S+G++YTWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 4095 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVI 4147



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 10/218 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   + Q   V++ G+      GH D  R  +  P+L+EAL       +  G  ++  L+
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGD--RAWYDEPKLIEALVEKNITFIACGSTYSAALS 573

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVY 291
             G ++T G   +G+LGHG++ +   P  +  L   +   V   +G S  L VT +G+V+
Sbjct: 574 SNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G G+   LG G       P+ +       I+V +V  G +   AL + G VYTWGKG 
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKGE 691

Query: 352 CGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
              LGHG+E     P+ +  LK+     L V  L VLA
Sbjct: 692 AYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLA 729



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  ++SV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--------IA 563

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 227
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 564 CGSTYSAALSSNGELYTWGRGNYGRLGHGNSDN-VMIPTLVTALNGHMVVYVACGSGDSQ 622

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 681

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G G  + LGHG +     P+ I   + K   V  +  G+ HV+AL     +Y W
Sbjct: 682 GEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTK--KVKELCVGNLHVLALTEDQLIYGW 739

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G+   G +     +   +PEP
Sbjct: 740 GRNDYGQIDPA--LGTVVPEP 758



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2953 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3011

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V+  +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 3012 PIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 3071

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+   + I  +
Sbjct: 3072 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQI 3130

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
               + D   +AL + G VY+WG G  G LG G
Sbjct: 3131 ACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3162



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2992

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2993 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGK 3052

Query: 355  LGHGDEIDKTLPEPLSSLKS 374
            LGHG+ I    P  + SLKS
Sbjct: 3053 LGHGNSISLDKPRLIESLKS 3072



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 7/141 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 4008

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4068

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LGHG+ +    P+ +  L
Sbjct: 4069 DGKLGHGNRLSYDRPKLIEEL 4089



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ LA+T +  VYS+G+G    LGHG++    +P+ I+    K I  +  + G  +  AL
Sbjct: 515 THYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFI--ACGSTYSAAL 572

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            S+G +YTWG+G  G LGHG+  +  +P  +++L  H+ V
Sbjct: 573 SSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVV 612



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   I       V+ V+   
Sbjct: 4095 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLIEALQDYKVIDVACGS 4153

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4154 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVVKVECGSQFSVA 4212

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4213 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4271

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4272 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4316



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++  V+S G    G LG G  +  C +   I+  +   VVQ+      +  + + G+V
Sbjct: 3142 LTADGLVYSWGDGDFGKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3200

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + +P LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3201 WTWGKGDYFRLGHGNDHH-VRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDND 3259

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G+G T+    P  +  L++   V +++ G S+ +A
Sbjct: 3260 HGQQGNGTTIVNKKPSLVHELDD-ARVNRVSCGSSHSIA 3297



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 12/92 (13%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+V GN  +  +GS + +            P+ +  F  K I ++   +   H +AL  
Sbjct: 475 ILSVNGNVYMMYYGSETQY------------PQRVYGFSEKPIIMIASHSDGTHYLALTQ 522

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              VY+WG G  G LGHGD      P+ + +L
Sbjct: 523 DNSVYSWGNGDGGRLGHGDRAWYDEPKLIEAL 554


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 136/283 (48%), Gaps = 18/283 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I+ G     ++S +  VF+CG    G LG G   T  V       +        V V 
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3120

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3178

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T 
Sbjct: 3179 AAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAG-RRVIQVACGSRDAQTLALTE 3237

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V+T
Sbjct: 3238 DGAVFSWGDGDFGKLGRGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWT 3295

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            WGKG    LGHG +     P+P+  L+     H+AV  L  LA
Sbjct: 3296 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3338



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 115/251 (45%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 3123 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 3180

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+ V AL G    QV  G     T  LT  G
Sbjct: 3181 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDG 3239

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3240 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3298

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3299 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3356

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3357 GSGNTFVNKKP 3367



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4236 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4293

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4353

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4354 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4411

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 4412 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4441



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 14/249 (5%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4238 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4293

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4352

Query: 232  TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4353 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4411

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYTWG 
Sbjct: 4412 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYTWGD 4469

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 4470 NDEGQLGDG 4478



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 11/175 (6%)

Query: 185 FTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++ G       GH DT+ R +  P  + AL     K V  G +++  +T  G+++T G  
Sbjct: 637 YSWGAGEDHRLGHGDTHARAV--PTKISALDRC-VKAVFCGCSYSAAITWSGNLYTWGRG 693

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+G+LGHG++ D+  P  +  L E   + V + +G ++ L +T  G+VY++G G    LG
Sbjct: 694 TYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLG 753

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +G  +  LQP  ++T  R    V R+ AG +  +AL + G++Y+WGK  C  LGH
Sbjct: 754 NGNCNSSLQPILVETLPR----VQRIFAGAQSSMALTTEGHLYSWGKASC--LGH 802



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V Q++ SE+    + Q G+++ C              +P   P+ +E L       +  
Sbjct: 572 QVKQIACSESLLLLLSQDGKLYNC-----------RLGKPELEPQPIEELAQETILSIAG 620

Query: 224 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                 FL I  +   ++ G+    +LGHGDT  R  P  I+ L+    V  +  G SY 
Sbjct: 621 HCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC--VKAVFCGCSYS 678

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T +G +Y++G G+   LGHG   D+  P  +       I  V + +GD H + L S 
Sbjct: 679 AAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSE 738

Query: 342 GYVYTWGKGYCGALGHGD 359
           G VY WG G  G LG+G+
Sbjct: 739 GLVYAWGDGDYGKLGNGN 756



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4146 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4204

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4205 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4263

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4264 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDS 4322

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4323 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4382

Query: 367  EPLSSLKSHLAVQGLSVLAEVC 388
              + SL       GL V+   C
Sbjct: 4383 YKIESLA------GLGVIKVEC 4398



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 20/239 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   + SN + +S G+     LGHG    + V  T+I+      V  V    +++A +
Sbjct: 624 GRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP-TKISALDRC-VKAVFCGCSYSAAI 681

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             SG ++T G  +    GH +++     P +V AL       V   +G   +  LT  G 
Sbjct: 682 TWSGNLYTWGRGTYGRLGHGNSDDQCV-PAIVMALAEYEIIDVALGSGDAHSLCLTSEGL 740

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           V+  G   +G+LG+G+        S+ P+  E +  V +I AG    +A+T  G +YS+G
Sbjct: 741 VYAWGDGDYGKLGNGN-----CNSSLQPILVETLPRVQRIFAGAQSSMALTTEGHLYSWG 795

Query: 295 SGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
             S  CLGH +    +Q    PR + + + K   +V V+ G  H +AL S G V+ WG+
Sbjct: 796 KAS--CLGHQQVERSVQGCSVPRLVSSLQHK--RLVDVAVGVAHCLALTSCGEVFGWGR 850



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ +   ++   +   V+QV+     
Sbjct: 3171 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKQVTALAGRRVIQVACGSRD 3229

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3230 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSATPHEIERLSGIGVIQIECGAQFSLALT 3288

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 3289 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG-RRVIHVAVGALHCLAVTDAGQVYA 3347

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3348 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3390



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 7/116 (6%)

Query: 264 PLEEVG--SVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           P+EE+   +++ IA      + LA+  N   YS+G+G +  LGHG+ H    P  I    
Sbjct: 606 PIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALD 665

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           R    V  V  G  +  A+  SG +YTWG+G  G LGHG+  D+ +P  + +L  +
Sbjct: 666 R---CVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEY 718



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     I+ G   +  V+ +G V++ 
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HISGGSKSLFIVSQDGKVFAC 3084

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L++
Sbjct: 3145 KLGHGNRTTLDKPRLVEALRA 3165



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 17/168 (10%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4139 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4190

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4191 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4250

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G VY WG+G  G LGHG+ +    P+    L  HL   G+SV    C
Sbjct: 4251 EGEVYAWGEGEDGKLGHGNRMSYDRPK----LVEHL--NGMSVADIAC 4292



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 4/169 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  +V+S G    G LG G  +  C    +I   +   V++V      + 
Sbjct: 4346 SGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGLGVIKVECGSQFSV 4404

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RP+ V AL+G     +  G       +  G 
Sbjct: 4405 ALTKSGAVYTWGKGDFHRLGHGSVDH-VRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4463

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            V+T G N  GQLG G       P+ +A L+    +V++  G ++ LA++
Sbjct: 4464 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-KHIVKVTCGSAHTLALS 4511



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           EL+P+ I+   ++ I  +       H +A+DS+   Y+WG G    LGHGD   + +P  
Sbjct: 601 ELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTK 660

Query: 369 LSSL 372
           +S+L
Sbjct: 661 ISAL 664


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  HT+ L+S + V S G    G LGHG    + +  T+++   A H+  ++   +H
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLP-TQLSALDAQHIDSIACGADH 77

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 78  TLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAVTM 136

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G+T D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 137 EGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGV-PIKMVAAGAEHSVAITENGELYGW 195

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D   P  + +       +V V+ G  H +++ SSG +YT+G    G
Sbjct: 196 GWGRYGNLGLGDRNDRWNPEKVSSVDCD--KMVMVACGWRHTISVSSSGGIYTYGWSKYG 253

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHG+  D  +P+ L +L   L  Q
Sbjct: 254 QLGHGNFEDSLVPQKLQALSDKLISQ 279



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G  +T   +  P+ ++A KGVP K V AG   +  +T 
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV-PQKIQAFKGVPIKMVAAGAEHSVAITE 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+ +G +Y++
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVD-CDKMVMVACGWRHTISVSSSGGIYTY 247

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G ++ WG    G
Sbjct: 248 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +G GD +D   P  +   +    VQ
Sbjct: 306 QVGVGDNLDHCSPVQVKFPQDQRVVQ 331



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 7/212 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQV 221
           + V+ +SA  +H   +L    V + G       GH DT+ RP+  P  + AL       +
Sbjct: 14  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSI 71

Query: 222 TAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
             G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+
Sbjct: 72  ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSH 130

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V S+G   N  LG G   D L P+ IQ F  KG+ +  V+AG EH VA+  
Sbjct: 131 CLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAF--KGVPIKMVAAGAEHSVAITE 188

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +G +Y WG G  G LG GD  D+  PE +SS+
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSV 220



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    +  +  +++      +V V+    H
Sbjct: 176 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRW-NPEKVSSVDCDKMVMVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH +    +  P+ ++AL      QV+ G   +  LT  
Sbjct: 235 TISVSSSGGIYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTST 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N  GQ+G GD LD  +P  +  P ++   VVQI+ G  + +AVT    V+S+
Sbjct: 294 GLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQ--RVVQISCGWRHTIAVTEKENVFSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHG+  D   P+ I+     G
Sbjct: 352 GRGTNGQLGHGDTIDRNSPKIIEALSVDG 380



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+S  +++ G S  G LGHG      V   ++   S   + QVS   
Sbjct: 226 VMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVP-QKLQALSDKLISQVSGGW 284

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G +F  G N     G  D N     P  V+  +     Q++ G   T  +T
Sbjct: 285 RHSMALTSTGLLFGWGWNKFGQVGVGD-NLDHCSPVQVKFPQDQRVVQISCGWRHTIAVT 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            + +V + G  T+GQLGHGDT+DR +PK I  L   GS     AGP
Sbjct: 344 EKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALSVDGS-----AGP 384


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADEHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRAQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T + V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEESVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-AQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   +H+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADEH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T +    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVV 245



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G + + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     + +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEESVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 245



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 122 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 178

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 179 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 238

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 239 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 298 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 355

Query: 358 GDEIDKTLPEPLSSL 372
               D+  P  +  L
Sbjct: 356 DSMNDEVNPRRVLEL 370



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 166 VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 224

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 225 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 284

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 285 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 343

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 344 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 402 ARGQLGTGHTCNVKCPSPVK 421



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 109 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 164

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 223

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 224 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 281

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 282 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 324



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 81  LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 140

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 141 TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 192

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 193 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 250

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 251 GKEFPSQASPQRVRSLE 267


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 245



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
           guttata]
          Length = 4864

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4208

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQV-PLLAGVFIEDIAVGAE 4304



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4154

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4155 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWA 4213

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4272

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ +  ++ G EH +AL S+G VY WG    G LG G
Sbjct: 4273 GLPEGRARNHNRPQQVPLL--AGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 4329



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 132/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDIINV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +  L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVGGLDG-IAIQQIS 724



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 4/161 (2%)

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQI 274
            P +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V  
Sbjct: 4031 PAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTS 4090

Query: 275  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                 + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H
Sbjct: 4091 CGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKH 4148

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
               + + G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4149 SAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4189



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 16/209 (7%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ + G V  CG  S    G  D+N      +  F P    ++K V   + + G 
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSIKKVSSSKGSDG- 468

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT
Sbjct: 469 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 344
            +G +Y++G G    LGHG+ +     R I T  +  I+V  VS G  H +AL   G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDIINVGEVSCGSSHTIALSKDGRTV 583

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +++G G  G LGHGD      P+ + +L+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4140 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4198

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4199 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 4255

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ + PL     +  IA G  + LA++  G 
Sbjct: 4256 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV-PLLAGVFIEDIAVGAEHTLALSSTGD 4314

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4315 VYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4360



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 16/217 (7%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT+ +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4193 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGT 4251

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + +  G   T 
Sbjct: 4252 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPLLAGVFIEDIAVGAEHTL 4307

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4308 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4366

Query: 290  -VYSFGSGSNFCLGHGE----QHDELQPRAIQTFRRK 321
               + G      LG  +    Q+  L+  +IQT R +
Sbjct: 4367 PPRAPGVSVPLQLGLPDVIPPQYGALKEVSIQTVRAR 4403


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 128/248 (51%), Gaps = 6/248 (2%)

Query: 130 SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G++  G LG  G E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP+ + +L+      ++ G   +  LT  G V + GSN  GQL
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQL 121

Query: 249 GH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG G   
Sbjct: 122 GHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTS 180

Query: 308 DEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P
Sbjct: 181 EKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP 238

Query: 367 EPLSSLKS 374
             L +L+S
Sbjct: 239 TQLRTLRS 246



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 94  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 153

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 154 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 213

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 272

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 273 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 330

Query: 354 ALGHG 358
            LG G
Sbjct: 331 QLGIG 335



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 5/261 (1%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++    +++CG++  G LGH  +T       R+       +  +S   
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGT 98

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G      LT
Sbjct: 99  AHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALT 158

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ +G ++
Sbjct: 159 NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSKSGAIF 217

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G  +   LG  + +    P  ++T R  G+  +  S GD+  V L + G V+T G G 
Sbjct: 218 GWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYI--SCGDDFSVFLTNEGGVFTCGAGT 275

Query: 352 CGALGHGDEIDKTLPEPLSSL 372
            G LGHG   ++ +P  +  L
Sbjct: 276 FGQLGHGSCSNEIVPRKVFEL 296



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  +S S ++F  G +  G LG     ++C   T++    +  V  +S  ++ 
Sbjct: 200 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP-TQLRTLRSLGVRYISCGDDF 258

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH   +  I  PR V  L G    Q+  G   T  F+  
Sbjct: 259 SVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPS 317

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G    GQLG G   +  TP+ +
Sbjct: 318 RGKIYGFGLGGVGQLGIGMVGNHSTPQIV 346


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 352 VLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 410

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH DT + + +PR VE+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDT-KSVSKPREVESLK 469

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G        G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 529

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L +  +  ++A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 AALVDP-NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKS- 587

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 588 -FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 637



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNTNIELVACG 372

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 373 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 431

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             VT +G +++FG G+   LGHG+     +PR +++   KG   V  + G  H  A+   
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESL--KGHRTVISACGVWHTAAVVEI 489

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                     SSG ++TWG G  G LGHGD+  K +P  +++L
Sbjct: 490 MVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 532



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 4/174 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 420

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V  +S G  H   + SSG ++T+G G  G LGHGD    + P  + SLK H  V
Sbjct: 421 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTV 474



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SEN 173
           I+ G +HT ++++S  +F+ G    GVLGHG   T+ VS  R       H   +SA    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVW 481

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 482 HTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVDPNFCRV 540

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 541 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPTRVEGKLAKSFVEEIACGAYHV 599

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 600 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 644



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D L
Sbjct: 295 GMKMDSLLPKALESAV-VLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL 353

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE 367
            P+ I +     I +V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P+
Sbjct: 354 HPKLIDSLSNTNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 410



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQ 183
           L ++  V++ GS + G LG+ P+    +  TR+    A   V+ ++    H A +    +
Sbjct: 550 LTTSGHVYTMGSPVYGQLGN-PQADGKLP-TRVEGKLAKSFVEEIACGAYHVAVLTSRTE 607

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 608 VYTWGKGANGRLGHGDTD-DRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 136/291 (46%), Gaps = 23/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 372 VLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP-K 430

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 431 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 489

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   + + G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 490 GLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 549

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A +E   +  Q+A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 550 ALVEH--NFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKS- 606

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L     VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 607 -FVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALK 656



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 114/229 (49%), Gaps = 25/229 (10%)

Query: 159 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A     V   +N      HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 322 FPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDA 380

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   T  +T+ G ++T G+    +G LGHG+ +    PK +  PLE + 
Sbjct: 381 LSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGI- 439

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  +R S
Sbjct: 440 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTMRAS 497

Query: 330 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            G  H  A+             SSG ++TWG G  G LGHGD+  K +P
Sbjct: 498 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 546



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 383 NT-NIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 440

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK
Sbjct: 441 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLK 489



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 21/237 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        ++ S    
Sbjct: 444 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVW 501

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V  ++   C QV
Sbjct: 502 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVALVEHNFC-QV 559

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+  GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 560 ACGHSLTVALTTSGHVYAMGSPVYGQLGNPQA-DGKLPTRVEGKLLKSFVEEIACGAYHV 618

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T    VY++G G+N  LGHG+  D   P  +   + K  HV  ++ G     A+
Sbjct: 619 AVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDK--HVKSIACGTNFTAAI 673



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 23/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ- 150
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 492 RTMRASCGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 544

Query: 151 ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
              CV+    NF       QV+   +    +  SG V+  G       G+   +  +  P
Sbjct: 545 VPTCVALVEHNF------CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL--P 596

Query: 208 RLVEA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
             VE   LK    +++  G      LT+R  V+T G   +G+LGHGDT DR  P  +  L
Sbjct: 597 TRVEGKLLKSF-VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDAL 655

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  IA G ++  A+
Sbjct: 656 KD-KHVKSIACGTNFTAAI 673


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  Q     +I   +  H++ V+  E+H+  +
Sbjct: 43  GDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   +H  F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L+    +F  G++  G LG G    + +    +++F  A+ + Q++  EN+   +   G+
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++CG+N     GH    +   R +L+  L     K+V  G   T  +   G + + GSN
Sbjct: 87  IYSCGNNDYGQLGHERGRK---RLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSN 143

Query: 244 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           + GQLG +       +P+ +  L     +VQ+A G  + LA+T NG +YS+GS S   LG
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202

Query: 303 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 203 LGVDIRSEVKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 260

Query: 362 DKTLPEPLSSLKS 374
           ++ LP  L +L++
Sbjct: 261 NRNLPHQLQTLRN 273



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 7/256 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQV+    
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++ 
Sbjct: 180 HALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  DT +R  P  +  L     +   A G  + + +T +G V++ 
Sbjct: 240 SGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRN-AKICYAACGEEFSVFLTVDGGVFTC 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  
Sbjct: 299 GAGMYGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 356

Query: 353 GALGHGDEIDKTLPEP 368
           G LG+     +++P P
Sbjct: 357 GQLGNNS--TRSIPTP 370



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 12/269 (4%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 171
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +         A    +V+  
Sbjct: 70  QIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQLILGL-----DAFVFKKVACG 124

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   V + GQ+F+ G NS    G    N     PR+V+ L      QV  G+     L
Sbjct: 125 AYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALAL 184

Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           T  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G +
Sbjct: 185 TNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGV-PIAFIACGGYHSIAISKSGAI 243

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           + +G  +   LG  +  +   P  +QT R   I     + G+E  V L   G V+T G G
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKI--CYAACGEEFSVFLTVDGGVFTCGAG 301

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G LGHG   ++ LP  +  L      Q
Sbjct: 302 MYGQLGHGSNNNEILPRQVMELMGSTVTQ 330



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S ++F  G +  G LG      + +   ++     A +   +  E  
Sbjct: 227 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLP-HQLQTLRNAKICYAACGEEF 285

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 286 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 344

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +G V+  G    GQLG+  T   PTP+ +
Sbjct: 345 QGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G ++  C     I F S   +  V V +   HA  + Q G+VF+ 
Sbjct: 2843 KLYACGEGTNGRLGLGDDSNVCEP-KPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 2901

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+
Sbjct: 2902 GEGEDGKLGHGNS-ISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 2960

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  V+QIA G   +  +A+T +G+VYS+G G    LG G
Sbjct: 2961 LGHGDTATQSKPKLVQSL--VGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3018

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++    
Sbjct: 3019 GSDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVR 3076

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P  +  L+     H+AV  L  LA
Sbjct: 3077 KPTLVEGLRGKKIIHVAVGALHCLA 3101



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 2886 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 2941

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 2942 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRVIQIACGSRDAQTMALTA 3000

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3001 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3059

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+   G VY WG    G
Sbjct: 3060 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDIGQVYAWGDNDHG 3117

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3118 QQGNGTTIVNKKP 3130



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 17/265 (6%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3823 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 3879

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 3880 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 3937

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   V+ +A  +G +  L VT + 
Sbjct: 3938 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY-KVIDVACGSGDAQTLCVTDDD 3996

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YTWG
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIYTWG 4054

Query: 349  KGYCGALGHGDEIDKTLPEPLSSLK 373
            KG    LGHG +     P  +++L+
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQ 4079



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 31/266 (11%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  ++SV+S G+  CG LGHG       P+  + +    I F        ++
Sbjct: 509 SDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITF--------IA 560

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF-- 227
               ++A +  +G+++T G  +    GH ++++ +  P LV AL G     V  G     
Sbjct: 561 CGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620

Query: 228 -TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  +T  G V + G   HG+LG G      TPK +  L ++ +V ++  G  +  A+T 
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGQQFSAALTA 679

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G VY++G G ++ LGHG +     P+ I   + K I  + +  G  HV+AL     VY 
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI--GHLHVLALTEDQLVYG 737

Query: 347 WGKGYCGALGHGDEIDKTL----PEP 368
           WG+       HG +ID  L    PEP
Sbjct: 738 WGRN-----DHG-QIDPALGTIVPEP 757



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 3862 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 3911

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+L+E
Sbjct: 3912 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIE 3970

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 3971 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4030

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4031 -VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4087

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4088 TGSLHCVACTDKGEVFTWGDNDEGQLGDG 4116



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 3/174 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L 
Sbjct: 2814 PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLS 2873

Query: 267  E-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K I  
Sbjct: 2874 QYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIR- 2932

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q
Sbjct: 2933 -DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQ 2985



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 12/231 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3815 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 3873

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 3931

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 3932 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 3991

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            +     V++WG G  G LG G      +P  + SL       GL V+   C
Sbjct: 3992 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLA------GLGVIKVEC 4036



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3808 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQ 3867

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 3868 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEI 3925

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++ G  H  A+ S+G++YTWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 3926 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVI 3978



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 14/214 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2809 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 2867

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 2868 PIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 2927

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+    G  V+
Sbjct: 2928 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSL--VGQRVI 2984

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHG 358
            +++ G  D   +AL + G VY+WG G  G LG G
Sbjct: 2985 QIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3018



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 16/253 (6%)

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           ++ +G ET +   F+         ++   +   H   + Q   V++ G+      GH + 
Sbjct: 484 MMYYGSETQRVYGFSE----KPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNM 539

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTP 259
                 P+L+EAL       +  G  ++  L+  G ++T G   +G+LGHG++  D   P
Sbjct: 540 TW-YDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIP 598

Query: 260 KSIAPLEEVGSVVQIAAG---PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             +  L     VV +A G       L VT +G+V+S+G G++  LG G       P+ + 
Sbjct: 599 TLVTALNG-HMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVD 657

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH- 375
                 I+V +V  G +   AL + G VYTWGKG    LGHG+E     P+ +  LK+  
Sbjct: 658 KLL--DINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKK 715

Query: 376 ---LAVQGLSVLA 385
              L +  L VLA
Sbjct: 716 IKDLYIGHLHVLA 728



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2848

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2849 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2908

Query: 355  LGHGDEIDKTLPEPLSSLKS 374
            LGHG+ I    P  + SLKS
Sbjct: 2909 LGHGNSISLDKPRLIESLKS 2928



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 7/141 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3839

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 3899

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LGHG+ +    P+ +  L
Sbjct: 3900 DGKLGHGNRLSYDRPKLIEEL 3920



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   I       V+ V+   
Sbjct: 3926 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLIEALQDYKVIDVACGS 3984

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 3985 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVA 4043

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4044 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4102

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4103 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4147



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++  V+S G    G LG G  +  C +   I+  +   VVQ+      +  + + G+V
Sbjct: 2998 LTADGLVYSWGDGDFGKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3056

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + +P LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3057 WTWGKGDYFRLGHGNDHH-VRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDND 3115

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G+G T+    P  +  L++   V +++ G S+ +A
Sbjct: 3116 HGQQGNGTTIVNKKPSLVHELDD-ARVNRVSCGSSHSIA 3153


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
           harrisii]
          Length = 4865

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4093

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4094 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4152

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4209

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4267

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4268 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4305



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQGLS 382
            G+     T P+ +S L   +A+Q +S
Sbjct: 699 QGNSTGPITKPKKVSGLDG-VAIQQIS 724



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       V+Q+S    H+A V  
Sbjct: 4097 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAVVTS 4155

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4156 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4214

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4215 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4273

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4274 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4330



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4034 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4093

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  V+++S G +H  
Sbjct: 4094 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVIQMSCGFKHSA 4151

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4152 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4190



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 13/233 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4141 IQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4199

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4200 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4256

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4257 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4314

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A  +S
Sbjct: 4315 DVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAAWTAS 4365



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4194 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4252

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4253 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4308

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T + V
Sbjct: 4309 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTASPV 4367



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 134/291 (46%), Gaps = 23/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 352 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 410

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGD-RKSVSLPREIESLK 469

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCV 529

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L E     Q+A G S  +A++ +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 VTLVEPN--CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKS- 586

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 587 -FVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALK 636



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 114/218 (52%), Gaps = 21/218 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HAA V + G+VF+ G+ S    GH  D++ P   P+L+E+L     + V  
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 371

Query: 224 GLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 280
           G   T  +T+ G ++T G  T  +G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 430

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 338
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 431 TAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 488

Query: 339 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                      SSG ++TWG G  G LGHGD+  K +P
Sbjct: 489 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVP 526



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 4/175 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 420

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           V  +S G  H   + SSG ++T+G G  GALGHGD    +LP  + SLK    VQ
Sbjct: 421 VSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQ 475



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++++S  +F+ G    G LGHG    + VS  R I        VQ +    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVW 481

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V  L    C QV
Sbjct: 482 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV-PTCVVTLVEPNC-QV 539

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  L+  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 540 ACGHSMTVALSRSGHVYTMGSCVYGQLGNTQA-DGKLPIRVEGKLSKSFVEEIACGAYHV 598

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    V+++G G+N  LGHG+ +D   P  ++  + K +  +
Sbjct: 599 AVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSI 643



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 11/133 (8%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           VH  GSN       G  +D   PK++     V  V  IA G  +   VT  G V+S+G  
Sbjct: 287 VHQVGSN------FGVKMDSLLPKALESAV-VLDVQNIACGGKHAALVTKQGEVFSWGEE 339

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GA 354
           S   LGHG   D   P+ I++     I +V  + G+ H  A+  SG +YTWG G    G 
Sbjct: 340 SGGRLGHGVDSDVPHPKLIESLSNTNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNYGL 397

Query: 355 LGHGDEIDKTLPE 367
           LGHG+++   +P+
Sbjct: 398 LGHGNQVSHWVPK 410



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 9/193 (4%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
           L+ L++V+ +  +  T+A  +++  G   +   S+  +F+ G    G LGHG + ++ V 
Sbjct: 468 LKGLRTVQAACGVWHTAA-VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVP 526

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPIFRPRLVE 211
              +         QV+   +    + +SG V+T G       G+   D   PI   R+  
Sbjct: 527 TCVVTLVEPN--CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPI---RVEG 581

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     +++  G      LT R  V T G   +G+LGHGDT DR TP  +  L++   V
Sbjct: 582 KLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKD-KQV 640

Query: 272 VQIAAGPSYMLAV 284
             IA G ++  A+
Sbjct: 641 KSIACGTNFTAAI 653



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 113 NMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQV 168
           N Q+  G   T+ +S S  V++ GS + G LG+    TQ      I      S + V ++
Sbjct: 536 NCQVACGHSMTVALSRSGHVYTMGSCVYGQLGN----TQADGKLPIRVEGKLSKSFVEEI 591

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H A +    +VFT G  ++   GH DTN     P LVEALK    K +  G NFT
Sbjct: 592 ACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTN-DRNTPTLVEALKDKQVKSIACGTNFT 650

Query: 229 GFLTIRGHV 237
             + +   V
Sbjct: 651 AAICLHKWV 659


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 8/285 (2%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           +Q VE ++         + I+ G  H++ LIS + V S G    G LGHG +T   +  T
Sbjct: 1   MQEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHG-DTDDRLLPT 59

Query: 156 RINFPSAAHVVQVSASENHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           +++   A  +V V    +H  A+     +V++ G       GH +++  +F P+ + AL+
Sbjct: 60  QLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSD-LFIPQPIRALQ 118

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+  KQ+  G +    +T+ G V + G N +GQLG G T D   P+ I   + V  +  +
Sbjct: 119 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGV-PIKMV 177

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           AAG  + +A+T NG +Y +G G    LG G+++D   P  +     K   +V V+ G  H
Sbjct: 178 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDK---MVLVACGWRH 234

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +++ SSG +YT+G    G LGHGD  D  +P  L +    L  Q
Sbjct: 235 TISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQ 279



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 130/318 (40%), Gaps = 70/318 (22%)

Query: 114 MQITTGRYHTLLISNSSV--FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAH 164
           + +  G  HTL  S S V  +S G    G LGHG       P+  + +   RI       
Sbjct: 70  VSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIK------ 123

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             Q++  ++H   V   G+V + G N +   G   T   +  P+ ++  +GVP K V AG
Sbjct: 124 --QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQTFQGVPIKMVAAG 180

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +T  G ++  G   +G LG GD  DR  P+ ++   +   +V +A G  + ++V
Sbjct: 181 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSV--DCDKMVLVACGWRHTISV 238

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--------------------- 323
           + +G +Y++G      LGHG+  D L P  +Q F  K I                     
Sbjct: 239 SSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYG 298

Query: 324 -----------------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                                         V ++S G  H +A+     VY+WG+G  G 
Sbjct: 299 WGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQ 358

Query: 355 LGHGDEIDKTLPEPLSSL 372
           LG GD ID   P+ + +L
Sbjct: 359 LGIGDTIDWNYPKIIEAL 376



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    +C+   +++      +V V+    H
Sbjct: 177 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIP-EKVSV-DCDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG+++T G +     GH D    +  P  ++A       QV+ G   T  LT  
Sbjct: 235 TISVSSSGELYTYGWSKYGQLGHGDCKDHLV-PHKLQAFSDKLICQVSGGWRHTMALTTG 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  P ++   V QI+ G  + +AVT    VYS+
Sbjct: 294 GQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVAQISCGWRHTIAVTEKDNVYSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG G+  D   P+ I+     G
Sbjct: 352 GRGTNGQLGIGDTIDWNYPKIIEALSVDG 380



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S  +++ G S  G LGHG      V      F S   + QVS    H
Sbjct: 228 VACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAF-SDKLICQVSGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   GQ++  G N     G  D N     P  V+        Q++ G   T  +T +
Sbjct: 287 TMALTTGGQLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEK 345

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            +V++ G  T+GQLG GDT+D   PK I  L   GS  Q
Sbjct: 346 DNVYSWGRGTNGQLGIGDTIDWNYPKIIEALSVDGSCGQ 384


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSVNDEVNP 285



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +T P+ + SL+
Sbjct: 172 GKEFPSQTSPQRVRSLE 188


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG++  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG+N
Sbjct: 2   LCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGAN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 33/324 (10%)

Query: 89  NWK-RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP 146
           +W+ R +R L++V+            +QI  G  H++ +++ S VF+ G  L G LGHG 
Sbjct: 79  DWEPRWIRALETVK-----------VVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-- 204
            +     F  +       +  +     +   +  +G+V   G  +S   G+ D +  I  
Sbjct: 128 VSDVWFPFL-VKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGG 186

Query: 205 --FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPT 258
             + P  +++L      Q T G NF+ FL+  G +++ G   +GQLG      ++L+ P 
Sbjct: 187 NVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPY 246

Query: 259 PKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             ++  +   G  V+ ++ G S+ LA++ +G+VYS+GSG N+ LGHG   D   P+ +  
Sbjct: 247 TGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAM 306

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
                   V VSAG  H  A+ ++G +YTWG+ + G LG G  ID    + +  L + + 
Sbjct: 307 LEAD--PCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVI 364

Query: 378 VQGLSVLAEV--------CPTIVQ 393
           ++G    +E+        C TI+Q
Sbjct: 365 LKGSVDSSEMAMRVGCGQCHTILQ 388



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 11/265 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++ LL     V+S G +     GHG E         I       VVQ++A E+H+  +
Sbjct: 47  GKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVAL 106

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
               +VFT G       GH D +   F P LV+ L+G   K +  G   T  +T  G V 
Sbjct: 107 TDRSEVFTWGRGLHGQLGHGDVSDVWF-PFLVKGLQGKGIKSIGCGYENTFAITGTGKVL 165

Query: 239 TCGSNTHGQLGHGDTL-----DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             GS   G+LG+GD       +   P  +  L +  +++Q   G ++ + ++  G +YS 
Sbjct: 166 GFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKF-TIIQATGGKNFSMFLSHTGQLYSV 224

Query: 294 GSGSNFCLG-HGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           G  +N  LG   E+ + L       +Q    KG+ V  VS GD H +AL   G VY+WG 
Sbjct: 225 GYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGS 284

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKS 374
           G   ALGHG   D   P+ ++ L++
Sbjct: 285 GINWALGHGGTEDTFTPKMVAMLEA 309



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 4/261 (1%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG    G LG   E  +      +       V  ++    H   + ++G+V++ G N
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            S   GH   +   + PR + AL+ V   Q+ AG + +  LT R  V T G   HGQLGH
Sbjct: 66  DSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGH 125

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           GD  D   P  +  L+  G +  I  G     A+TG G V  FGS ++  LG+G+    +
Sbjct: 126 GDVSDVWFPFLVKGLQGKG-IKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGI 184

Query: 311 QPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
                   + K +    +++ + G    + L  +G +Y+ G    G LG   E  ++L  
Sbjct: 185 GGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNL 244

Query: 368 PLSSLKSHLAVQGLSVLAEVC 388
           P +     ++ +G+ V    C
Sbjct: 245 PYTGTMQEVSHKGVFVKYVSC 265


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSVNDEVNP 285



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +T P+ + SL+
Sbjct: 172 GKEFPSQTSPQRVRSLE 188


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSL 372
               D+  P  +  L
Sbjct: 277 DSVNDEVNPRRVLEL 291



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +T P+ + SL+
Sbjct: 172 GKEFPSQTSPQRVRSLE 188


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSVNDEVNP 285



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +T P+ + SL+
Sbjct: 172 GKEFPSQTSPQRVRSLE 188


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSVNDEVNP 285



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +T P+ + SL+
Sbjct: 172 GKEFPSQTSPQRVRSLE 188


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 145/312 (46%), Gaps = 30/312 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ S ++++ G      G LGHG   +  +    I    +  +  VS   
Sbjct: 355 VACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGP 414

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A V   G++FT GD +    GH D +    +PR VE+LKG+   +V+ G+  T  + 
Sbjct: 415 WHTAAVSSQGKLFTFGDGTFGALGHGDRSS-TSKPREVESLKGLRTLKVSCGIWHTAAVI 473

Query: 232 -----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                      ++ G + T G+   GQLGHGD   R  P  ++       V Q+A   S 
Sbjct: 474 DFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVS---MPAGVCQVACAHSM 530

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY+ G+     LG      +L        R    H+ +++ G  HVVAL S
Sbjct: 531 TIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIR--NCHIKQIACGSHHVVALSS 588

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ----GLSVLAEVCP--TIVQE 394
           +G VYTWGKG  G LGHGD  D+  P  + +LK H  V+    G +  A +CP   +   
Sbjct: 589 NGDVYTWGKGINGQLGHGDIKDRHTPTLVKALK-HKQVKSVVCGSNFTAVICPHKCVSSA 647

Query: 395 DTRSCSDIICHD 406
           D   CS   CH+
Sbjct: 648 DQSICSG--CHN 657



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 112/213 (52%), Gaps = 17/213 (7%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++    HA  V + GQ+F+ G++S    GH   +  + +P++++AL       V  G   
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGH-GADADVSQPKVIDALSESNVVLVACGEFH 361

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           T  +T+ G+++T G +TH  G LGHG  +    P+ +    E   +  ++ GP +  AV+
Sbjct: 362 TCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVS 421

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------- 337
             G +++FG G+   LGHG++    +PR +++   KG+  ++VS G  H  A        
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREVESL--KGLRTLKVSCGIWHTAAVIDFINES 479

Query: 338 --LDS--SGYVYTWGKGYCGALGHGDEIDKTLP 366
             LD+  SG ++TWG G  G LGHGDE  + +P
Sbjct: 480 DRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVP 512



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 15/193 (7%)

Query: 203 PIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
           PI R     P+ ++ +  +  + +  G      +T +G + + G ++ G+LGHG   D  
Sbjct: 280 PIMRMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVS 339

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAI 315
            PK I  L E  +VV +A G  +  AVT +G +Y++G  ++    LGHG       PR +
Sbjct: 340 QPKVIDALSE-SNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREV 398

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              + + + +  VS G  H  A+ S G ++T+G G  GALGHGD    + P  + SLK  
Sbjct: 399 -IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVESLK-- 455

Query: 376 LAVQGLSVLAEVC 388
               GL  L   C
Sbjct: 456 ----GLRTLKVSC 464



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 284 VTGNGVVYSFGSG-SNFCLGHGE---------QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           V G G V   G G SN  LG            + D L P+A+   R   +    ++ G +
Sbjct: 251 VDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDALLPKALD--RIAALDAQIIACGSK 308

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           H V +   G +++WG+   G LGHG + D + P+ + +L
Sbjct: 309 HAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDAL 347


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 AKGQLGTGHTCNVKCPSPVK 342



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G+++  +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 245



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEYPSQASPQRVRSLE 188


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
           (Silurana) tropicalis]
          Length = 4842

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 128/243 (52%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGTLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+   +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFTRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYC 352
           G C
Sbjct: 641 GAC 643



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 133/258 (51%), Gaps = 10/258 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4070

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4129

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE +  + Q+A G ++ LAV+ +G +
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGL-HIGQVACGLNHTLAVSADGSL 4188

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 4189 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4246

Query: 350  GYCGALGHGDEIDKTLPE 367
                 L  G   +   P+
Sbjct: 4247 DRLIGLPEGRARNHNRPQ 4264



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4074 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4132

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G+   QV  GLN T  ++  G  V  
Sbjct: 4133 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWA 4191

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4192 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4250

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      GI +  ++ G EH +AL +SG VY WG    G LG G
Sbjct: 4251 GLPEGRARNHNRPQLVPVLL--GIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLG 4307



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 131/266 (49%), Gaps = 15/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK +  L+ + +  ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTR-KVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQGLS 382
           G+     T P+ +S L   +A+Q +S
Sbjct: 700 GNSTGPITKPKKVSGLDG-VAIQQIS 724



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 4/157 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4011 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4070

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4128

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             + + G ++T+G G  G LG G+  +K LPE +++L+
Sbjct: 4129 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4165



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 16/209 (7%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ + G V  CG  S    G  D+N      +  F P    ++K V   + + G 
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSIKKVSSSKGSDG- 468

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT
Sbjct: 469 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT 527

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 344
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +++G G  G LGHGD      P+ + +L+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+      H+ QV+   
Sbjct: 4118 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGLHIGQVACGL 4176

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4177 NHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4233

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  +  +  IA G  + LA++ +G 
Sbjct: 4234 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGI-FIDDIAVGAEHTLALSASGE 4292

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4293 VYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIR--QISAGRCHSAA 4338



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4171 QVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4229

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    +LV  L G+    +  G   T 
Sbjct: 4230 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QLVPVLLGIFIDDIAVGAEHTL 4285

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4286 ALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTALQG-KNIRQISAGRCHSAAWTAAPV 4344



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG- 331
            Q+  G +    +  NG V + G GS   LG G   D      I   +   +  +  S G 
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4071

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            D H +AL  SG V++WG G  G LGHG+   +  P  + +L+    VQ
Sbjct: 4072 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ 4119



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSL 372
               D+  P  +  L
Sbjct: 277 DSVNDEVNPRRVLEL 291



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +T P+ + SL+
Sbjct: 172 GKEFPSQTSPQRVRSLE 188


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 47  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 103

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 104 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 163

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 164 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 222

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 223 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 280

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 281 DSMNDEVNP 289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 91  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 149

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 150 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 209

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 210 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 268

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 269 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 327 ARGQLGTGHTCNVKCPSPVK 346



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 34  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 89

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 90  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 148

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 149 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 206

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 207 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 249



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 6   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 65

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 66  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 117

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 118 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 175

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 176 GKEFPSQASPQRVRSLE 192


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 5/259 (1%)

Query: 116 ITTGRYHTLLISNSSVF-SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ +   +V  S G    G LGHG    + V      F +      +  +++ 
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+  +  QV++ G       GH +++  +F P+ V AL+G+  KQ+  G +    +T+ 
Sbjct: 86  TAYSEEEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVRALQGIKIKQMACGDSHCLAVTMG 144

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E +  V  IAAG  +  AVT +G +Y +G
Sbjct: 145 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGI-CVKMIAAGAEHTAAVTEDGDLYGWG 203

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D   P  +     +G  +V ++ G  H + + SSG +YT+G    G 
Sbjct: 204 WGRYGNLGLGDRNDRFVPEKVSLV--EGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQ 261

Query: 355 LGHGDEIDKTLPEPLSSLK 373
           LGHGD  D   P  + +LK
Sbjct: 262 LGHGDFEDHLFPHKVEALK 280



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 5/215 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L+   + + G       GH D    +  P ++          V  G
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV-PTVISGFDAPRITSVICG 81

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 82  ADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGI-KIKQMACGDSHCLA 140

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 141 VTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGICVKMIAAGAEHTAAVTEDGD 198

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +Y WG G  G LG GD  D+ +PE +S ++    V
Sbjct: 199 LYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMV 233



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 6/253 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H L ++    V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 130 QMACGDSHCLAVTMGGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGICVKMIAAGAE 188

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N   F P  V  ++G     +  G   T  ++ 
Sbjct: 189 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-FVPEKVSLVEGEKMVLIACGWRHTITVSS 247

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L++  S  QI+ G  + +A+T +G +Y +
Sbjct: 248 SGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKD-SSTSQISGGWRHTMALTSDGKLYGW 306

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  +Q        V +V+ G  H +A      V+ WG+G  G
Sbjct: 307 GWNKFGQVGAGDSVDHCSP--VQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSG 364

Query: 354 ALGHGDEIDKTLP 366
            LGHG+ +D+  P
Sbjct: 365 QLGHGEIVDRNKP 377



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 183 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVP-EKVSLVEGEKMVLIACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +F P  VEALK     Q++ G   T  LT  
Sbjct: 242 TITVSSSGILYTYGWSKYGQLGHGDFEDHLF-PHKVEALKDSSTSQISGGWRHTMALTSD 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD++D  +P  +  P E+   V Q+A G  + LA T    V+++
Sbjct: 301 GKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQ--KVAQVACGWRHTLAYTEKKNVFAW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D  +P  I      G
Sbjct: 359 GRGTSGQLGHGEIVDRNKPLMIDAISPDG 387



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  I  F      +  V  
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAP--RITSVIC 80

Query: 331 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G +H  A  +    VY+WG G  G LGHG+  D   P+P+ +L      QG+ +    C
Sbjct: 81  GADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRAL------QGIKIKQMAC 133



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV------QV 168
           I  G  HT+ +S+S + ++ G S  G LGHG        F    FP     +      Q+
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHG-------DFEDHLFPHKVEALKDSSTSQI 287

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S    H   +   G+++  G N     G  D+      P  V         QV  G   T
Sbjct: 288 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHC-SPVQVMFPAEQKVAQVACGWRHT 346

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
              T + +V   G  T GQLGHG+ +DR  P  I  +   GS
Sbjct: 347 LAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGS 388


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 104 SDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPS 161
           S +     G + ++ G  H   I S   +F+ G  LC     G ++ + V + TR++F  
Sbjct: 206 STLTRLGNGIIDVSYGADHGAAIDSTGKLFTWG--LCDHGRLGLKSGKDVPYPTRVDFLK 263

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              +V V+     +A +    +VFT G  S    GH + +   + PR V AL  +P  QV
Sbjct: 264 DEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDE-WLPRSVAALHHIPIVQV 322

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--------APLEEVGSVVQ 273
             G      L++ G V+T G   HGQLGHGD     TPK +          + +VGS V 
Sbjct: 323 ALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVL 382

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A G S  L +T  G + SFG      LG GE+    +P  I +        V +SAGDE
Sbjct: 383 LACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDE 442

Query: 334 HVVALDSSGYVYTWGKGYCGALG 356
           H  A+ S G VYTWG+G  GA+G
Sbjct: 443 HCAAVTSKGNVYTWGQGCFGAVG 465



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 5/165 (3%)

Query: 207 PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+LV  L   G     V+ G +    +   G + T G   HG+LG     D P P  +  
Sbjct: 202 PKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDF 261

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L++   +V +  G      ++ +  V+++GSGS   LGH E+ DE  PR++       I 
Sbjct: 262 LKDE-VIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHH--IP 318

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           +V+V+ G EH+ AL   G VYTWG+G  G LGHGD    + P+ L
Sbjct: 319 IVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKL 363



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 262 IAPLEEVGSVVQIAAGPSYM-LAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTF 318
           +A L       ++ +GPS + L    +  +Y F  G   N+ LG G+   +  P+ + T 
Sbjct: 149 VAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTL 208

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            R G  ++ VS G +H  A+DS+G ++TWG    G LG     D   P  +  LK  + V
Sbjct: 209 TRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIV 268

Query: 379 Q 379
            
Sbjct: 269 D 269



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 3/138 (2%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFG 294
           ++   G + + QLG G    +P PK ++ L  +G+ ++ ++ G  +  A+   G ++++G
Sbjct: 179 YLFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWG 238

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              +  LG     D   P  +   + + I  V V+ G      +     V+TWG G  G 
Sbjct: 239 LCDHGRLGLKSGKDVPYPTRVDFLKDEVI--VDVTCGMYSSACISHDMKVFTWGSGSKGQ 296

Query: 355 LGHGDEIDKTLPEPLSSL 372
           LGH ++ D+ LP  +++L
Sbjct: 297 LGHVEKSDEWLPRSVAAL 314


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 497 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 553

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 554 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 613

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 614 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 672

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 673 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 730

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 731 DSMNDEVNP 739



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 133/278 (47%), Gaps = 8/278 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 541 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 599

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 600 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 659

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 660 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 718

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 719 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G LG G   +   P P+    +  + Q LS  A+ C
Sbjct: 777 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQ-LSARADRC 813



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F +   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 484 FIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 539

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 540 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 598

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 599 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 656

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 657 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 699


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H   +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHNLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PR+++ L      QV+ G   +  L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHNLALSDRGQLFSWGAGSDGQLGLM-TTEDAVAVPRVIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G +    L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 245



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 14/272 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3097 IHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3154

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + +  G + +
Sbjct: 3155 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRSTLDKPRLVEALRAKKIRDIACGSSHS 3212

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T 
Sbjct: 3213 AAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSG-RRVIQVACGSRDAQTLALTE 3271

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V+T
Sbjct: 3272 DGAVFSWGDGDFGKLGRGGSEGSSTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWT 3329

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WGKG    LGHG +     P+P++ L+ H  +
Sbjct: 3330 WGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVI 3361



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  +T  +   R +    A  +  ++   +H+A 
Sbjct: 3157 GKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAA 3214

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3215 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDG 3273

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3274 AVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3332

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3333 GDYYRLGHGGDQHVRKPQPIAGLR--GHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3390

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3391 GSGNTFVNKKP 3401



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4361

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4421

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4422 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4479

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 4480 VYTWGKGDFHRLGHGSVEHVRRPKKVAALQ 4509



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4306 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4361

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4420

Query: 232  TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4421 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4479

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+TWG 
Sbjct: 4480 VYTWGKGDFHRLGHGSVEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVFTWGD 4537

Query: 350  GYCGALGHGDEIDKTLPEPLSSLK 373
               G LG G       P  +++L+
Sbjct: 4538 NDEGQLGDGTVTAIQRPRLVAALQ 4561



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4214 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4272

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4273 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4331

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4332 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4390

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4391 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4450

Query: 367  EPLSSLKSHLAVQGLSVLAEVC 388
              + SL       GL V+   C
Sbjct: 4451 YKIESLA------GLGVIKVEC 4466



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 9/174 (5%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G   S   GH D +     P  +E+L  +  K V  G +++  +T+ G+++T G  T
Sbjct: 668 YSWGVGDSRRLGHGDCHAREL-PTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGT 725

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           +G+LGHG + D+  P  +  L++   V V + +G ++ L +T  G+V+++G G    LG+
Sbjct: 726 YGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGN 785

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           G  +  L P+ I    R    V RV AG +  +AL   G +Y+WGK  C  LGH
Sbjct: 786 GSCNSSLLPQLIDCLPR----VQRVFAGAQFSLALSCEGQLYSWGKASC--LGH 833



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 2/137 (1%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + ++ G     +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 666 NAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITLGGNLYTWGR 723

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G+   LGHG   D+  P  +   +   +  V + +GD H + L S G V+ WG G  G L
Sbjct: 724 GTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKL 783

Query: 356 GHGDEIDKTLPEPLSSL 372
           G+G      LP+ +  L
Sbjct: 784 GNGSCNSSLLPQLIDCL 800



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 106/242 (43%), Gaps = 26/242 (10%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+   + SN + +S G      LGHG        T+  S  R+       V  V    +
Sbjct: 655 GRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL-------VKSVYCGCS 707

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +   G ++T G  +    GH  ++     P +V ALK      V   +G   T  L
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCL-PAMVMALKDHQVVDVALGSGDAHTLCL 766

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G   +G+LG+G       P+ I  L  V  V    AG  + LA++  G +Y
Sbjct: 767 TSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVF---AGAQFSLALSCEGQLY 823

Query: 292 SFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           S+G  S  CLGH      +Q    PR I   + K   +V V+ G  H +AL SSG ++ W
Sbjct: 824 SWGKAS--CLGHQLVERNVQGCSVPRLITGLQHK--RIVDVAVGVAHCLALSSSGEIFGW 879

Query: 348 GK 349
           G+
Sbjct: 880 GR 881



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  IS+   +++ G    G LGHG   TQ +    +   S   V+QV+     
Sbjct: 3205 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVAALSGRRVIQVACGSRD 3263

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3264 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALT 3322

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ IA L     V+ +A G  + LAVT  G VY+
Sbjct: 3323 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRG-HRVIHVAVGALHCLAVTDAGQVYA 3381

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3382 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVIVNRVACGSSHSMA 3424



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 5/140 (3%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V   G N   QLG   G  +  PT    +P       + IA G   +  V+ +G VY+ G
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPT---FSPTISRLRPIHIAGGSKSLFVVSQDGKVYACG 3119

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G 
Sbjct: 3120 EGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3179

Query: 355  LGHGDEIDKTLPEPLSSLKS 374
            LGHG+      P  + +L++
Sbjct: 3180 LGHGNRSTLDKPRLVEALRA 3199



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV  N   YS+G G +  LGHG+ H    P  I++  R    V  V  G  +  A+ 
Sbjct: 657 HFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL---VKSVYCGCSYSAAIT 713

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G +YTWG+G  G LGHG   D+ LP  + +LK H  V
Sbjct: 714 LGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVV 752



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 17/168 (10%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4207 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4258

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4259 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4318

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G VY WG+G  G LGHG+ +    P+    L  HL   G+SV    C
Sbjct: 4319 DGEVYAWGEGEDGKLGHGNRMSYDRPK----LVEHL--NGMSVADIAC 4360



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 4/169 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  +V+S G    G LG G  +  C    +I   +   V++V      + 
Sbjct: 4414 SGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGLGVIKVECGSQFSV 4472

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH      + RP+ V AL+G     +  G       +  G 
Sbjct: 4473 ALTKSGAVYTWGKGDFHRLGHGSVEH-VRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4531

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            V T G N  GQLG G       P+ +A L+    +V++  G ++ LA++
Sbjct: 4532 VFTWGDNDEGQLGDGTVTAIQRPRLVAALQG-KHIVKVTCGSAHTLALS 4579


>gi|390335480|ref|XP_782620.3| PREDICTED: uncharacterized protein LOC577290 [Strongylocentrotus
           purpuratus]
          Length = 861

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 34/261 (13%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 173
           I+ G  HT +++    V + G+   G LG G + T   S  R+   P  + V  V+    
Sbjct: 71  ISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATH-TSPQRLRLGPHDSQVAGVACGSR 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH--RDTN-----------RPIFRPRLVEALKGVPCKQ 220
           H    L++G+ ++CG+N     G+  R  N           RPI   ++V         Q
Sbjct: 130 HTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVV---------Q 180

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+ G  FT FL   G V  CG+N  GQLG+G   +  +PK   PL+   +V++IAAG  +
Sbjct: 181 VSCGEKFTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPK---PLDNPENVIRIAAGSCH 237

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G +Y++G G   C   G + D+L     +T RR   +VV V+ G  H +AL +
Sbjct: 238 SLAVTATGELYAWGMG-RAC---GSRRDDLLTPQRKTTRRS--NVVGVAGGSGHSLALTA 291

Query: 341 SGYVYTWGKGYCGALGHGDEI 361
           +G VY+WG G  G LGHG+++
Sbjct: 292 NGTVYSWGGGVDGQLGHGEDV 312



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 46/258 (17%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           FL+ + H   +V+ S G       ++   L  +  V  CG++  G LG+G    + VS  
Sbjct: 169 FLRPIMHRK-VVQVSCGE------KFTLFLFESGQVAGCGANNFGQLGNG-TRAEMVSPK 220

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            ++ P   +V++++A   H+  V  +G+++  G      CG R       R  L+     
Sbjct: 221 PLDNPE--NVIRIAAGSCHSLAVTATGELYAWG--MGRACGSR-------RDDLL----- 264

Query: 216 VPCKQVTAGLNFTGF---------LTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPL 265
            P ++ T   N  G          LT  G V++ G    GQLGHG+ +     P+++A  
Sbjct: 265 TPQRKTTRRSNVVGVAGGSGHSLALTANGTVYSWGGGVDGQLGHGEDVQYLAQPEALADG 324

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-- 323
              G V Q+A G SY  A+ G+G +Y +G  S     H  Q D  QP + + +R  GI  
Sbjct: 325 ALPGRVAQVACGDSYSAALLGDGSLYMWGKSS-----HVIQAD--QPSSQKVYRPVGISL 377

Query: 324 ---HVVRVSAGDEHVVAL 338
               +  V+ G  H  A+
Sbjct: 378 NGRSIAMVTCGSWHTAAI 395



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ G + T  +T +  V T G+   GQLG GD     +P+ +        V  +A G 
Sbjct: 69  KHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRLGPHDSQVAGVACGS 128

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIH--VVRVSAGDE 333
            + +    NG  YS G+     LG+    + + E Q   +  F R  +H  VV+VS G++
Sbjct: 129 RHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQ--VLPHFLRPIMHRKVVQVSCGEK 186

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
             + L  SG V   G    G LG+G   +   P+PL +
Sbjct: 187 FTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPKPLDN 224


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 125/255 (49%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSL 372
               D+  P  +  L
Sbjct: 277 DSMNDEVNPRRVLEL 291



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 7/259 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPL 369
             G LG G   +   P P+
Sbjct: 323 ARGQLGTGHTCNVKCPSPV 341



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 16/192 (8%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T GQLGH    ++  P+ I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNK--PEQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 361
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 362 DKTLPEPLSSLK 373
            +  P+ + SL+
Sbjct: 177 SQASPQRVRSLE 188


>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1024

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 12/262 (4%)

Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           G YH+LL++    V+S G +    LG  GP       F RI     A + QV+A E+ + 
Sbjct: 40  GAYHSLLVTTDGLVYSAGKNDHRQLGRSGPAGI----FKRIEAIEVASIRQVAAGEDFSL 95

Query: 177 FVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +   G+V+    G+     CG + +      P+++ +L  VP   ++ G      L+  
Sbjct: 96  MLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGGRHALALSAS 155

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
             V   G N +GQLG+G  +    P  I  L   G VV +AAG  + LA+T    +Y+FG
Sbjct: 156 SIVFAWGENANGQLGNGHFVPSYQPTPIPELNGRG-VVGLAAGRQHSLALTAASELYAFG 214

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           +  +  LG G+    L+P  ++   RKG+  V+VSAGD H +A  ++G+ + WG    G 
Sbjct: 215 ANEHGQLGVGDTKPRLRPELVRAALRKGL--VKVSAGDFHSLARSATGHAFAWGGNQWGQ 272

Query: 355 LGHGDEIDKT-LPEPLSSLKSH 375
            G GD+ D   LP  + S++ H
Sbjct: 273 CGVGDDADAILLPREIDSVQEH 294



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 10/159 (6%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE--EVGSVVQI 274
            +   AG   +  +T  G V++ G N H QLG      R  P  I   +E  EV S+ Q+
Sbjct: 34  LRAAAAGAYHSLLVTTDGLVYSAGKNDHRQLG------RSGPAGIFKRIEAIEVASIRQV 87

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDE 333
           AAG  + L +   G VY+ G+G    LG G Q  E   R  +  R    + +V +S G  
Sbjct: 88  AAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGGR 147

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           H +AL +S  V+ WG+   G LG+G  +    P P+  L
Sbjct: 148 HALALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPEL 186


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4846

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 129/243 (53%), Gaps = 13/243 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 403 IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVSSSKGS 461

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 462 DGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 520

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 521 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 577

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 578 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 635

Query: 350 GYC 352
           G C
Sbjct: 636 GAC 638



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 14/265 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQMVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + + G+  +G+LG G+T ++  P+ ++ LE  +VG   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVG---QVACGLNHTLAVSADG 4190

Query: 289  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            + V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G VYT+
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGNVYTF 4248

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSL 372
            G+     L  G   +   P+ + +L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPAL 4273



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 20/267 (7%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   S   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 464 HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 522

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 523 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 578

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 579 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 637

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 638 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 693

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            G+        P++  K  + + G+++
Sbjct: 694 QGNSTG-----PITKPKKVIGLDGVAI 715



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++F+ G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4137 DGKLFSFGNGDYGRLGLGNTSNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWA 4195

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGNVYTFGQDRLI 4254

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      G+ +  V+ G EH + L S+G VY WG    G LG G
Sbjct: 4255 GLPEGRARNHNRPQQVPAL--TGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLG 4311



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 95/195 (48%), Gaps = 6/195 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            AA V ++ +V+  G NSS       T   I +P+L  +      + + AG   T  ++ 
Sbjct: 359 EAAMVSETCEVYVWGSNSSHQLVE-GTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISS 415

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G V  CG  ++G+LG GD+ ++ T K +   P   +  V        + LA T  G V+
Sbjct: 416 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVF 475

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G G    LGHG    +  P+ IQ    +G  VV VSAG  H  A+   G +YTWG+G 
Sbjct: 476 SWGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGD 534

Query: 352 CGALGHGDEIDKTLP 366
            G LGHGD   + +P
Sbjct: 535 FGRLGHGDSNSRNIP 549



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 6/179 (3%)

Query: 199  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            +  R I  P L  +      +QV  G N T  +   G V  CG  ++G+LG G++ D   
Sbjct: 3997 EAGRNILVPTLAPSFSQA--QQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV 4054

Query: 259  PKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
               I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +PR I+
Sbjct: 4055 LTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4114

Query: 317  TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                +G  VV++S G +H   + S G ++++G G  G LG G+  +K LPE +S+L+ H
Sbjct: 4115 AL--QGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGH 4171



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +FS G+   G LG G  + + +   R++      V QV+   
Sbjct: 4122 VQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLP-ERVSALEGHQVGQVACGL 4180

Query: 173  NHAAFVLQSGQ---VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G     F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4181 NHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4237

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G+V+T G +    L  G   +   P+ +  L  V  +  +A G  + L ++  G 
Sbjct: 4238 ALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGV-FIEDVAVGAEHTLTLSSTGD 4296

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 4297 VYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQ--QISAGRCHSAA 4342



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 7/145 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G+  HGQL   G  +  PT   +AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VFLWGAGRHGQLAEAGRNILVPT---LAP--SFSQAQQVVCGQNCTFVIQANGTVSACGE 4038

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHG+   +  P  + +L+    VQ
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQ 4123



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 4/133 (3%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  GSN+  QL  G       PK +AP         I AG      ++ +G V + G 
Sbjct: 368 EVYVWGSNSSHQLVEGTQEKILQPK-LAP--SFSDAQTIEAGQYCTFVISSDGSVRACGK 424

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
           GS   LG G+ +++   + +     + I  V  S G D H +A  S G V++WG G  G 
Sbjct: 425 GSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGDYGK 484

Query: 355 LGHGDEIDKTLPE 367
           LGHG+   +  P+
Sbjct: 485 LGHGNSSTQKYPK 497



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S    +V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4175 QVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4233

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V AL GV  + V  G   T 
Sbjct: 4234 QFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRP----QQVPALTGVFIEDVAVGAEHTL 4289

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  I+ L+   ++ QI+AG  +  A T   V
Sbjct: 4290 TLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQG-KNIQQISAGRCHSAAWTAPPV 4348



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 624 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 681

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 682 YAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 721



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I AG + M++ T    VY +GS S+  L  G Q   LQP+   +F         + AG  
Sbjct: 355 IQAGEAAMVSETCE--VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQY 408

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
               + S G V   GKG  G LG GD  +++  + L + + H A++ +S
Sbjct: 409 CTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVS 456


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
           niloticus]
          Length = 4936

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 130/248 (52%), Gaps = 13/248 (5%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           A    I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS
Sbjct: 410 ADAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVS 468

Query: 170 AS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGL 225
           +S   + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG 
Sbjct: 469 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGY 527

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++
Sbjct: 528 RHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALS 584

Query: 286 GNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G  V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G V
Sbjct: 585 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQV 642

Query: 345 YTWGKGYC 352
           Y WG G C
Sbjct: 643 YAWGCGAC 650



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4168 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4227 DGKLFTFGNGDYGRLGLGNTSNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWA 4285

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G V++FG     
Sbjct: 4286 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGKVFTFGQDRLI 4344

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ +      GIH+  V+ G EH + L S+G VYTWG    G LG G
Sbjct: 4345 GLPEGRARNHNRPQQVPGL--SGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLG 4401



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 11/277 (3%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I  N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4164

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4165 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4223

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE    V Q+A G ++ L V+ +G +
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGY-HVGQVACGLNHTLVVSADGMM 4282

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G V+T+G+
Sbjct: 4283 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGKVFTFGQ 4340

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
                 L  G   +   P+ +  L S + +Q ++V AE
Sbjct: 4341 DRLIGLPEGRARNHNRPQQVPGL-SGIHIQDVAVGAE 4376



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 131/267 (49%), Gaps = 20/267 (7%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 476 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 590

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 649

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 650 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 705

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            G+        P++  K  + + G+++
Sbjct: 706 QGNSTG-----PITKPKKVIGLDGVAI 727



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)

Query: 198  RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            R+   P   P   +A      +QV  G N T  +   G V  CG  ++G+LG G++ D  
Sbjct: 4090 RNILVPTIAPSFSQA------QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLH 4143

Query: 258  TPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
                I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +PR I
Sbjct: 4144 VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4203

Query: 316  QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            +    +G  VV++S G +H   + + G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4204 EAL--QGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGY 4261



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 16/209 (7%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 419 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 475

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 476 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 344
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 590

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +++G G  G LGHGD      P+ + +L+
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQ 619



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   ++      HV QV+   
Sbjct: 4212 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-EKVTALEGYHVGQVACGL 4270

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4271 NHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4327

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V T G +    L  G   +   P+ +  L  +  +  +A G  + L ++  G 
Sbjct: 4328 ALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGI-HIQDVAVGAEHTLVLSSTGD 4386

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  + T + K IH  ++SAG  H  A
Sbjct: 4387 VYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIH--QISAGRCHSAA 4432



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL++S     V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4265 QVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4323

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G+VFT G +          R+ NRP    + V  L G+  + V  G   T 
Sbjct: 4324 QFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRP----QQVPGLSGIHIQDVAVGAEHTL 4379

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+T GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4380 VLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQG-KNIHQISAGRCHSAAWTAPSV 4438



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 636 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 693

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 694 YAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 733


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 136/283 (48%), Gaps = 18/283 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3019 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3076

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3134

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3135 AAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGR-RVVQVACGSRDAQTLALTE 3193

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3194 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3251

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            WGKG    LGHG +     P+P+  L+     H+AV  L  LA
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3294



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 3079 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 3136

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3137 ISSQGELYTWGLGEYGRLGHGD-NVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDG 3195

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 3196 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3254

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3255 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3312

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3313 GSGNTFVNKKP 3323



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4192

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4252

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4253 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4310

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 4311 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4340



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 116/252 (46%), Gaps = 14/252 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4134 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4189

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4190 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4248

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T 
Sbjct: 4249 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTK 4307

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4308 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4365

Query: 347  WGKGYCGALGHG 358
            WG    G LG G
Sbjct: 4366 WGDNDEGQLGDG 4377



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 8/174 (4%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  T
Sbjct: 635 YSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGT 693

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           + +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG+
Sbjct: 694 YARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 753

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           G  +  LQP  +++  R    V RV AG +  +AL S G +Y+WGK  C  LGH
Sbjct: 754 GNCNGSLQPILVESLPR----VQRVFAGSQFSLALSSEGQLYSWGKATC--LGH 801



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 5/246 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4045 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4103

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4104 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4162

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4163 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4221

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4222 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4281

Query: 367  EPLSSL 372
              + SL
Sbjct: 4282 YKIESL 4287



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 3/132 (2%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 625 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 683

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 684 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 743

Query: 348 GKGYCGALGHGD 359
           G G  G LG+G+
Sbjct: 744 GDGDYGKLGNGN 755



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 115/283 (40%), Gaps = 23/283 (8%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ      +   +   VVQV+     
Sbjct: 3127 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVAL-AGRRVVQVACGSRD 3185

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3186 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3244

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 3245 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3303

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G   +   G G      +P  +       + V RV+ G  H +A         WG    
Sbjct: 3304 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA---------WGLPNA 3352

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL-AEVCPTIVQE 394
             +    DE +K  P P  S +  L    L +  AE   T+ QE
Sbjct: 3353 SS----DE-EKRGPVPFGSTRDPLGGSSLGIYEAETVQTLKQE 3390



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 15/237 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   + SN + +S G+     LGHG    + V  T+I       V  V    +++A +
Sbjct: 622 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP-TKIAALEQHCVQSVYCGCSYSAAI 680

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
              G + T G  +    GH +++     P LV AL       V   +G   +  LT  G 
Sbjct: 681 TCGGNLLTWGRGTYARLGHGNSDDRSL-PTLVVALSDHMVVDVALGSGDAHSLALTSEGL 739

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G   +G+LG+G+      P  +   E +  V ++ AG  + LA++  G +YS+G  
Sbjct: 740 VFAWGDGDYGKLGNGNCNGSLQPILV---ESLPRVQRVFAGSQFSLALSSEGQLYSWGKA 796

Query: 297 SNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +  CLGH      +Q    PR + + + K I  V VS    H +AL SSG V+ WG+
Sbjct: 797 T--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA--HCLALSSSGEVFGWGR 849



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3040

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L++
Sbjct: 3101 KLGHGNRTTLDKPRLVEALRA 3121



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGP----SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           L +P  + + P+EEV   V I+        + LA+  N   YS+G+G +  LGHG+ H  
Sbjct: 595 LAKPEAEPL-PMEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHAR 653

Query: 310 LQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             P  I    +   H V+ V  G  +  A+   G + TWG+G    LGHG+  D++LP  
Sbjct: 654 AVPTKIAALEQ---HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTL 710

Query: 369 LSSLKSHLAV 378
           + +L  H+ V
Sbjct: 711 VVALSDHMVV 720



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 17/168 (10%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4038 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4089

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4090 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4149

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G VY WG+G  G LGHG+ +    P+    L  HL   G+SV    C
Sbjct: 4150 EGEVYAWGEGEDGKLGHGNRMSYDRPK----LVEHL--NGMSVADIAC 4191


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 125/255 (49%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSL 372
               D+  P  +  L
Sbjct: 277 DSMNDEVNPRRVLEL 291



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 7/259 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPL 369
             G LG G   +   P P+
Sbjct: 323 ARGQLGTGHTCNVKCPSPV 341



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 16/192 (8%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T GQLGH    ++  P+ I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNK--PEQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 361
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 362 DKTLPEPLSSLK 373
            +  P+ + SL+
Sbjct: 177 SQASPQRVRSLE 188


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 13/266 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      QV
Sbjct: 83  GQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQV 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG V+T+G G CG LGH    D+  P
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNP 285



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A   SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%), Gaps = 8/217 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G V+ WGK   G LG  DE D+  P  +  L+S   V
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV 245


>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 992

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 4/208 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   GQ+F  G+N+    G R        PR +++L G+P  Q++A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  L++ G V   G N+ GQLG GDT DR  P  +  L+    +V I+ G  +  A
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKR-KKIVSISCGGEHTAA 237

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSG 342
           +   G V++FGSG    LGH    DE  PR +      G  V +V+ G  H +V+  S  
Sbjct: 238 LAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTASPK 295

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            +Y++G G  G LG+G+++ +++P P+ 
Sbjct: 296 LIYSFGCGMQGQLGNGEQVKQSVPLPVD 323



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++N   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT    F P +V +LK      ++ G   T  L 
Sbjct: 181 NHSFVLSLSGVVFGWGGNSAGQLGLGDTTDR-FVPTVVNSLKRKKIVSISCGGEHTAALA 239

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN-GVV 290
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G ++ L  T +  ++
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL--WGSKVSQVTCGRNHTLVSTASPKLI 297

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 338
           YSFG G    LG+GEQ  +  P  +   T       + ++ AG+ H  AL
Sbjct: 298 YSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 7/164 (4%)

Query: 213 LKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEV 268
           LKG+  +QV     G   +  LT  G +   G N  GQLG   +     +P+ +  L  +
Sbjct: 112 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGI 171

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             V QI+AG ++   ++ +GVV+ +G  S   LG G+  D   P  + + +RK I  V +
Sbjct: 172 -PVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKI--VSI 228

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           S G EH  AL   G V+T+G G  G LGH    D+  P  ++ L
Sbjct: 229 SCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL 272



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 263 APLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFR 319
           +PL+  E   V+QIA G  + +A+T +G ++ +G  +   LG   EQ     PR +Q+  
Sbjct: 110 SPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSL- 168

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             GI V ++SAG  H   L  SG V+ WG    G LG GD  D+ +P  ++SLK    V
Sbjct: 169 -CGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIV 226


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 132/266 (49%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 69

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T 
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTX 128

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 129 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKXVAAGAEHTAAVTEDGDLYGW 187

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G     V+ G  H +++  SG +YT+G    G
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKXSXVACGWRHTISVSYSGALYTYGWSKYG 245

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L +    Q
Sbjct: 246 QLGHGDLEDHLIPHKLEALSNSFISQ 271



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 65

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 66  GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 124

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 125 AVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKXVAAGAEHTAAVTEDG 182

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 183 DLYGWGWGRYGNLGLGDRTDRLVPERVTS 211



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKXVAAGAE 173

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 174 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVS 231

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  +  A+T +G +Y 
Sbjct: 232 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGARHTXALTSDGKLYG 290

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 291 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 348

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 349 GQLGIGESVDRNFPKIIEAL 368



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 5/157 (3%)

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGSGS 297
           + G    GQLGHGD  DRP+P  ++ L+    +V +  G  + +A + +G  VYS+G G 
Sbjct: 29  SWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGXEVYSWGWGD 87

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG   D   P  I+     GI + +++ GD H +A+   G V +WG+   G LG 
Sbjct: 88  FGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGL 145

Query: 358 GDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQE 394
           GD  D  +P+ + + +  + ++ ++  AE    + ++
Sbjct: 146 GDTEDSLVPQKIQAFEG-IRIKXVAAGAEHTAAVTED 181



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+          V+    H
Sbjct: 168 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKXSXVACGWRH 226

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 227 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGARHTXALTSD 285

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 286 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 343

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 344 GRGTNGQLGIGESVDRNFPKIIEALSVDG 372



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV 61


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 115/226 (50%), Gaps = 19/226 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDH 532



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 137/306 (44%), Gaps = 26/306 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L +  +  ++A G S
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVD-HNFRKVACGHS 542

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G V++ GS     LG   Q D   P  ++  R    +V  ++ G  HV  + 
Sbjct: 543 LTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVT 600

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC--PTIVQE 394
               VYTWGKG  G LGHGD+ D+  P  + +LK         G +  A VC    +   
Sbjct: 601 LKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGA 660

Query: 395 DTRSCS 400
           D  +CS
Sbjct: 661 DQNACS 666



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLK 466


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 135/289 (46%), Gaps = 34/289 (11%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  GR  TL+++ +  V   G +  G LG G +T    + T +   +  H++ +    +
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLG-DTRNRTAPTPVETLNNQHIIDIGVGLD 203

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH--------------------------RDTNRPIFR- 206
           H+  V ++G VF  G N     G                           R+   P    
Sbjct: 204 HSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEY 263

Query: 207 --PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPT-PKSI 262
             P LV  L+ +    V  G + T  L+ RG+V++ GSN  G LG G  L  R T P  I
Sbjct: 264 TLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKI 323

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRK 321
              E    + Q+++G S+ L +T  G VYS G G+   LG G +  +   P  ++ F + 
Sbjct: 324 KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQN 383

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            I +V+V+AG  H +ALD  G VYTWG G  G LGHG+E D+ LP+ ++
Sbjct: 384 KIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQIN 432



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 4/123 (3%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVG-SVVQIA 275
            KQ+++G + T FLT  G+V++CG  T G+LG G DT +R +P  +    +    +V++A
Sbjct: 332 IKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVA 391

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG S+ +A+   G VY++G+GSN  LGHG + DE  P+ I  F     +V+ + AG ++ 
Sbjct: 392 AGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHS--NVIDIFAGIDNS 449

Query: 336 VAL 338
           + L
Sbjct: 450 LVL 452



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINF-PSAAHVVQVSASENHAAFVLQS 181
           LL +  +V+S GS+  G LG G E    V+  T+I F  +   + Q+S+  +H  F+   
Sbjct: 289 LLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSG 348

Query: 182 GQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHV 237
           G V++CG  +      G   +NR    P L++       K  +V AG + +  L  +G V
Sbjct: 349 GNVYSCGWGTEGRLGLGMDTSNRD--SPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRV 406

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           +T G+ ++G+LGHG+  D   PK I       +V+ I AG
Sbjct: 407 YTWGNGSNGKLGHGNESDENLPKQINFFSH-SNVIDIFAG 445



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 37/219 (16%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           S +V+  G N S   G+       +R P  ++ LK    ++V  G +FT  LT  G V  
Sbjct: 108 SNKVYMWGTNKS---GNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLG 164

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G N  GQLG GDT +R  P    P+E + +  ++ I  G  + +AVT  G V+ +G   
Sbjct: 165 FGENNFGQLGLGDTRNRTAP---TPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 298 NFCLGH-----------------------GEQHDELQPRAIQTFRR--KGIHVVRVSA-- 330
              +G                        G   +++ P    T      G+  +++S   
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 331 -GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            G +    L + G VY++G    G LG G E+   + +P
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKP 320



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%)

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI   V+  G+N  G +       R  P +I  L+    V ++  G S+ L +T +G V 
Sbjct: 106 TISNKVYMWGTNKSGNMSLPSEQYR-FPTTIDLLKNT-FVEKVIGGRSFTLVLTRDGKVL 163

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            FG  +   LG G+  +   P  ++T   +  H++ +  G +H +A+  +G+V+ WG   
Sbjct: 164 GFGENNFGQLGLGDTRNRTAPTPVETLNNQ--HIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 352 CGALGH 357
            G +G 
Sbjct: 222 EGQIGQ 227



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 106 IVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSA 162
             ET+    Q+++G  HTL L S  +V+SCG    G LG G +T+   S T + +   + 
Sbjct: 325 FTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNK 384

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRP 203
             +V+V+A  +H+  +   G+V+T G+ S+   GH    D N P
Sbjct: 385 IKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLP 428


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 121/253 (47%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C S  +   I    +  +  V+    H+
Sbjct: 3005 GKHALALTQDGRVFSWGEGEDGKLGHG----NCSSLDKPRLIESLKSKRIRDVACGSGHS 3060

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DTN  + +P+LV++L G    QV  G     T  LT 
Sbjct: 3061 AAITSSGELYTWGLGEYGRLGHGDTNTQL-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3119

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  +  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3120 DGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3178

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+  +G VY WG    G
Sbjct: 3179 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 3236

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3237 QQGNGSTIVNKKP 3249



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 132/265 (49%), Gaps = 15/265 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G +   C     I F S   +  V V +   HA  + Q G+VF+ 
Sbjct: 2962 KLYACGEGTNGRLGLGDDGNACEP-KPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSW 3020

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH + +  + +PRL+E+LK    + V  G   +  +T  G ++T G   +G+
Sbjct: 3021 GEGEDGKLGHGNCSS-LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3080 LGHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3137

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE---I 361
                   P  +   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++    
Sbjct: 3138 GSDGCYTPLLVD--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVR 3195

Query: 362  DKTLPEPLSSLKS-HLAVQGLSVLA 385
              TL E L   K  H+AV  L  LA
Sbjct: 3196 KPTLVEGLRGKKVIHVAVGALHCLA 3220



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 17/265 (6%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   T  V    +   S  HV    V V++ 
Sbjct: 3935 TGGEQTLFAVTADGKVYATGYGAVGRLGIG--GTDSVMMPTL-LESIQHVFVKKVAVNSG 3991

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     V  G + +  
Sbjct: 3992 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDVACGGHHSAA 4049

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT + 
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVTDDD 4108

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YTWG
Sbjct: 4109 NVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVIKVECGSQFSVALTRSGSIYTWG 4166

Query: 349  KGYCGALGHGDEIDKTLPEPLSSLK 373
            KG    LGHG +     P  +++L+
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQ 4191



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 5/227 (2%)

Query: 155  TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            T ++F  S   +VQ  AS        Q   V+  G N     G    ++ I  P   E+L
Sbjct: 2881 TSVSFLASDWEIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSK-IKLPVYSESL 2939

Query: 214  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 272
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V
Sbjct: 2940 SKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKV 2999

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
             + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K I    V+ G 
Sbjct: 3000 AVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIR--DVACGS 3057

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +Q
Sbjct: 3058 GHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQ 3104



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 3974 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4023

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V V+   +H+A +  +G ++T G       GH D+   +  P+LVE
Sbjct: 4024 DRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVE 4082

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4083 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG 4142

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4143 -VIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4199

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4200 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 4228



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 10/219 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
            H   + +   V++ G+      GH D  R  +  P+L+E+L       +  G  ++  L
Sbjct: 516 KHYLALTEDSSVYSWGNGDGGRLGHGD--RTWYEEPKLIESLVDKNITFIACGSTYSAAL 573

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G ++T G   +G+LGHG++ D   P  ++ L   +   V   +G S  L VT +G+V
Sbjct: 574 SSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIV 633

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G  +    P+ +       I+V +V  G +   AL + G VYTWGKG
Sbjct: 634 FSWGDGDYGKLGRGGCNGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKG 691

Query: 351 YCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
               LGHG+E     P+ + +LK+     L V  L VLA
Sbjct: 692 EAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLA 730



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3920 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQ 3979

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 3980 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEI 4037

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V V+ G  H  A+ S+G++YTWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 4038 VDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI 4090



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 34/285 (11%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           G+++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++  
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITF--------IACG 566

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAGLN 226
             ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G +
Sbjct: 567 STYSAALSSNGELYTWGRGNYGRLGHGNSDD-VMVPTLVSALNGHMIVYVAC---GSGDS 622

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T 
Sbjct: 623 QTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTA 681

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G VY++G G  + LGHG +     P+AI+  + K   V  +  G  HV+AL     VY 
Sbjct: 682 YGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTK--KVKELCVGSLHVLALTEDQLVYG 739

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC-PT 390
           WG+   G      +ID  L   +S       + G +V+  VC PT
Sbjct: 740 WGRNDYG------QIDPALGTIVSEPTLCPTLSGKNVIGLVCGPT 778



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3927 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMMPTLLESIQHVFVKK 3985

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V +A G
Sbjct: 3986 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDVACG 4043

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4044 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4103

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            +     V++WG G  G LG G      +P  + SL       GL V+   C
Sbjct: 4104 VTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLA------GLGVIKVEC 4148



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%)

Query: 155  TRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P      S    V ++        V Q G+++ CG+ ++   G  D       P+
Sbjct: 2928 SKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNAC-EPK 2986

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+      P+ I  L+
Sbjct: 2987 PIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLK 3046

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  +A G  +  A+T +G +Y++G G    LGHG+ + +L+P+ +Q+    G  V+
Sbjct: 3047 S-KRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSL--VGQRVI 3103

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHG 358
            +V+ G  D   +AL + G VY+WG G  G LG G
Sbjct: 3104 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3137



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 4/110 (3%)

Query: 271 VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           V  IA+ P   + LA+T +  VYS+G+G    LGHG++    +P+ I++   K I  +  
Sbjct: 506 VAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFI-- 563

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + G  +  AL S+G +YTWG+G  G LGHG+  D  +P  +S+L  H+ V
Sbjct: 564 ACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIV 613



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 7/141 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3951

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4011

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LGHG+ +    P+ +  L
Sbjct: 4012 DGKLGHGNRLSYDRPKLIEEL 4032



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + +  G +H+  I+++  +++ G    G LGHG    Q ++   +       V+ V+   
Sbjct: 4038 VDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLVEALQDYKVIDVACGS 4096

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4097 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKVPMKIESLAGLGVIKVECGSQFSVA 4155

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A +  G V
Sbjct: 4156 LTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACSDKGEV 4214

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4215 FTWGDNDEGQLGDGTTCALQRPRLVHAL--QGKKITRVACGSAHTLA 4259



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++ SV+S G    G LG G  +  C +   ++  +   VVQ+      +  + + G+V
Sbjct: 3117 LTADGSVYSWGDGDFGKLGRG-GSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEV 3175

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + +P LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3176 WTWGKGDYFRLGHGNDHH-VRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDND 3234

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G+G T+    P  +  L++   V +++ G S+ +A
Sbjct: 3235 HGQQGNGSTIVNKKPSLVHELDD-ARVNRVSCGSSHSIA 3272



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 12/92 (13%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+ +GN  +  +GS + +            P+ +  F  K + ++      +H +AL  
Sbjct: 476 ILSTSGNVYMMYYGSETQY------------PQRVYGFSDKFVAMIASHPDGKHYLALTE 523

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              VY+WG G  G LGHGD      P+ + SL
Sbjct: 524 DSSVYSWGNGDGGRLGHGDRTWYEEPKLIESL 555


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 136/266 (51%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTSA--GGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L + +  Q
Sbjct: 255 QLGHGDLEDHLVPHKLEALGNSVISQ 280



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 5/213 (2%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    V+ +SA  +H+  +L    V + G       GH D    +  P  + AL      
Sbjct: 12  PPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDDHQIV 70

Query: 220 QVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            VT G + T  +   R  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G 
Sbjct: 71  SVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGD 129

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LAVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+
Sbjct: 130 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAV 187

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
              G +Y WG G  G LG GD  D+ +PE ++S
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTS 220



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 10/261 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVY 291
            G ++T G + +GQLGHGD  D   P     LE +G+ V  QI+ G  + +A+T +G +Y
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLVPHK---LEALGNSVISQISGGWRHTMALTSDGKLY 298

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G 
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSP--VQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 356

Query: 352 CGALGHGDEIDKTLPEPLSSL 372
            G LG G+ +D+  P+ + +L
Sbjct: 357 NGQLGIGESLDRNFPKIIEAL 377



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLV-PHKLEALGNSVISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+ LD+ +P  +  + +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-IPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESLDRNFPKIIEALSVDG 381



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 109 TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           TSAG  +++    G  HT+ +S S ++++ G S  G LGHG      V   ++     + 
Sbjct: 219 TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPH-KLEALGNSV 277

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQV 221
           + Q+S    H   +   G+++  G N     G   + D   P+ + R+ +  K V   QV
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRIPDDQKVV---QV 333

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           + G   T  +T R +V   G  T+GQLG G++LDR  PK I  L   G+  Q
Sbjct: 334 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALSVDGASGQ 385



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIV 70


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 13/266 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++      I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---EPIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q+
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG V+T+G G CG LGH    D+  P
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNP 285



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 8/217 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPEPIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G V+ WGK   G LG  DE D+  P  +  L+S   V
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV 245


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 135/278 (48%), Gaps = 17/278 (6%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S   +  V V +   H
Sbjct: 3001 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEP-KPIPFLSQFVIKKVAVHSGGKH 3059

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH + N  + +P+L+E LK    + +  G   +  +   
Sbjct: 3060 ALALTQDGKVFSWGEGEDGKLGHGN-NMSLDKPKLIETLKSKRIRDIACGSGHSAAIASN 3118

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVY 291
            G ++T G   +G+LGHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VY
Sbjct: 3119 GELYTWGLGEYGRLGHGDTVTQARPKLVQTL--VGHRVVQVACGSRDAQTMALTTDGCVY 3176

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            S+G G    LG G       P  ++  R  G+ VV+V  G +  +AL   G V+TWGKG 
Sbjct: 3177 SWGDGDFGKLGRGGSDGCYTPLVVE--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGD 3234

Query: 352  CGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
               LGHG++     P  +  L+     H+AV  L  LA
Sbjct: 3235 YFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3272



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3057 GKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--------DIACG 3108

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
              H+A +  +G+++T G       GH DT     RP+LV+ L G    QV  G     T 
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGDTVTQA-RPKLVQTLVGHRVVQVACGSRDAQTM 3167

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V++ G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G 
Sbjct: 3168 ALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLG-VVQVECGAQFSLALTKYGE 3226

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G VY WG 
Sbjct: 3227 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGD 3284

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3285 NDHGQQGNG 3293



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 15/256 (5%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 180
            + ++  V+S G    G LG G   T  V    +   S  HV    V VS+   H   +  
Sbjct: 3991 VTADGKVYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCLALSS 4047

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T
Sbjct: 4048 EGHVYSWGEGDDGKLGH--GNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYT 4105

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGS 297
             G   +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G 
Sbjct: 4106 WGKGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4164

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGH
Sbjct: 4165 YGKLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4222

Query: 358  GDEIDKTLPEPLSSLK 373
            G +     P  +++L+
Sbjct: 4223 GTDDHVRRPRKVAALQ 4238



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 19/254 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASEN 173
           + G++H  L  +  V+S G+   G LGHG      VS+       A    ++V ++    
Sbjct: 516 SDGKHHLALTQDGCVYSWGNGDGGRLGHG----DTVSYDEPKLIEALLEKNIVFIACGST 571

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +  SG+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +
Sbjct: 572 YSAALSVSGELYTWGRGNYGRLGHGNFD-DVMIPTLVTTLKGHTVVHVACGSGDSQTLCV 630

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY
Sbjct: 631 TASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVY 689

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G G  + LGHG +     P+ I++ R K I    +S G  H++ L    +VY WG+  
Sbjct: 690 TWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIK--DLSVGATHILVLTEDQFVYGWGRND 747

Query: 352 CGALGHGDEIDKTL 365
            G      +ID TL
Sbjct: 748 YG------QIDPTL 755



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 4/214 (1%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            QV+   +  A   Q   V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSK-IKLPVYSEVLSKLKPIHIAGGSK 3004

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 3005 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +G V+S+G G +  LGHG      +P+ I+T + K I    ++ G  H  A+ S+G +Y
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--DIACGSGHSAAIASNGELY 3122

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            TWG G  G LGHGD + +  P+ + +L  H  VQ
Sbjct: 3123 TWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQ 3156



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 7/213 (3%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++  L+
Sbjct: 519 KHHLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIEALLEKNIVFIACGSTYSAALS 577

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 290
           + G ++T G   +G+LGHG+  D   P  +  L+   +VV +A  +G S  L VT +G+V
Sbjct: 578 VSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKG-HTVVHVACGSGDSQTLCVTASGIV 636

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTWGKG
Sbjct: 637 FSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTWGKG 694

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
               LGHG E     P+ + SL+    ++ LSV
Sbjct: 695 DTYRLGHGSEEHVRYPKIIESLRDK-KIKDLSV 726



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + +++G  H L +S+   V+S G    G LGHG +    +S+
Sbjct: 4021 LLESIQH------VFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNK----MSY 4070

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       ++ ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4071 DRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4129

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4130 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4189

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4190 -VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4246

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4247 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 4275



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 10/230 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3974 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4032

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  ++ IA G 
Sbjct: 4033 VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGV-EIIDIACGG 4091

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4092 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
                 V++WG G  G LG G      +P  + SL       GL V+   C
Sbjct: 4152 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLA------GLGVIKVEC 4195



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 14/214 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2980 SKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 3038

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 3039 PIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLK 3098

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +QT    G  VV
Sbjct: 3099 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTL--VGHRVV 3155

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHG 358
            +V+ G  D   +AL + G VY+WG G  G LG G
Sbjct: 3156 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG 3189



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 5/140 (3%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G VYS
Sbjct: 3943 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDD 4059

Query: 353  GALGHGDEIDKTLPEPLSSL 372
            G LGHG+++    P+ +  L
Sbjct: 4060 GKLGHGNKMSYDRPKLIEDL 4079



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASE 172
            I  G  H+  I SN  +++ G    G LGHG   TQ      +       VVQV+  + +
Sbjct: 3105 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARP-KLVQTLVGHRVVQVACGSRD 3163

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                 +   G V++ GD      G R  +   + P +VE L G+   QV  G  F+  LT
Sbjct: 3164 AQTMALTTDGCVYSWGDGDFGKLG-RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG+      P  +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     +   V RVS G  H +A
Sbjct: 3282 WGDNDHGQQGNGTTSVNRKPSLVHEL--EDARVNRVSCGSSHSIA 3324



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL +++  +V+S G    G LG G  +  C    +I+  +   V++V      + 
Sbjct: 4143 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVIKVECGSQFSV 4201

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 4202 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4260

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 4261 VFTWGDNDEGQLGDGTTSALHRPRLVHALQG-KKITRVACGSAHTLA 4306


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  ++V V+  E+H+  +
Sbjct: 90  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQNIVHVACGESHSLAL 146

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 147 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 206

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+++G  +
Sbjct: 207 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFAWGMNN 265

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 266 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 323

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 324 DSMNDEVNP 332



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 134 VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 193 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 252

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 253 SLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 311

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 312 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 369

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 370 ARGQLGTGHTCNVKCPSPVK 389



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 77  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQN 132

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 133 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 191

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 192 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 249

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 250 FALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 292



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P++   +     K+V  G N + FL   G V+TCG NT GQLGH    ++  P+ I 
Sbjct: 69  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIG 126

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ 
Sbjct: 127 ALAD-QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 185

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
           I  ++VS G+ H +AL + G  +TWGK   G LG G E   +  P+ + SL+
Sbjct: 186 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 235


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 218

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 219 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 277

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 278 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 335

Query: 354 ALGHG 358
            LG G
Sbjct: 336 QLGIG 340



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 11/253 (4%)

Query: 130 SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G++  G LG  G E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRL-----VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +N     GH     P  RPR+     + +L+      ++ G   +  LT  G V + GSN
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSN 121

Query: 244 THGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             GQLGH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG
Sbjct: 122 AVGQLGHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 303 HGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G   +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D  
Sbjct: 181 IGTTSEKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 362 DKTLPEPLSSLKS 374
            +  P  L +L+S
Sbjct: 239 SRCYPTQLRTLRS 251



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 10/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAAHVVQ 167
           +++  G  HTL ++    +++CG++  G LGH  +T      +   F R+       +  
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITC 98

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S    H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G   
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              LT  G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ 
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSK 217

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G ++ +G  +   LG  + +    P  ++T R  G+  +  S GD+  V L + G V+T
Sbjct: 218 SGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYI--SCGDDFSVFLTNEGGVFT 275

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
            G G  G LGHG   ++ +P  +  L
Sbjct: 276 CGAGTFGQLGHGSCSNEIVPRKVFEL 301



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 13/189 (6%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTP--- 259
           +  PR ++  +     +V  G + T FLT  G ++ CG+N HGQLGH  DTL    P   
Sbjct: 24  VMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMS 83

Query: 260 --KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQ 316
             K +  LE    +  I+ G ++ LA+T  G V+S+GS +   LGH  E   +  PR I+
Sbjct: 84  RFKRLTSLENY-IITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIK 142

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
               K  HVV++++G  H +AL ++G +Y WG    G LG G   +K    P+ +L   L
Sbjct: 143 AIGAK--HVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKV---PMPTLIQSL 197

Query: 377 AVQGLSVLA 385
           A   ++ +A
Sbjct: 198 AGVPIAFIA 206



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  +S S ++F  G +  G LG     ++C   T++    +  V  +S  ++ 
Sbjct: 205 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP-TQLRTLRSLGVRYISCGDDF 263

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH   +  I  PR V  L G    Q+  G   T  F+  
Sbjct: 264 SVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPS 322

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G    GQLG G   +  TP+ +
Sbjct: 323 RGKIYGFGLGGVGQLGIGMVGNHSTPQIV 351


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+V+ 
Sbjct: 49  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYA 107

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L      +V  G + T  LT  G V+  G N  G
Sbjct: 108 WGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSG 167

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG +Y +G   N  LG G  
Sbjct: 168 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 227

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G+++V+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 228 GNQQTPCRIAAL--QGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 285

Query: 367 EPLSSLKSHL 376
            P+++ K  +
Sbjct: 286 TPINTDKERI 295



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V +V+   +H   +   G+V+  G N+S   G   T N+P  R R+   L+      +  
Sbjct: 139 VTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIAC 197

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G ++  G N +GQLG G+  ++ TP  IA L+ V ++VQ+A G ++ LA
Sbjct: 198 GQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NIVQVACGYAHTLA 256

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA--GDEHVVALDSS 341
           +T  G VY++G+ S   LG G + ++  P  I T + +   +V V+A        A   S
Sbjct: 257 LTDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKER---IVEVAACHTSHTSAAKTQS 313

Query: 342 GYVYTWGK 349
           G V  WG+
Sbjct: 314 GQVLMWGQ 321



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP  ++A T +
Sbjct: 45  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVVIA-TAD 102

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G      LG+G  +  L P  + T       V  V+ G  H +AL + G VY W
Sbjct: 103 GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLLSKRVTEVACGSHHTIALTTDGEVYAW 161

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS 371
           G    G +G G   ++  P  +SS
Sbjct: 162 GYNNSGQVGSGSTANQPTPRRVSS 185



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 261 SIAPLEEVGSVVQ---IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           ++ P EE+  + Q     +  +  L VT N  V++ G+  + CLG G+    ++PR I  
Sbjct: 20  ALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDV 79

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              K I  +    G  HVV   + G VY WG      LG+G
Sbjct: 80  LCGKKIVSLSYGTG-PHVVIATADGEVYAWGHNGYSQLGNG 119


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 13/266 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++      I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---ELIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q+
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG V+T+G G CG LGH    D+  P
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNP 285



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 8/217 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P L+ AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPELIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G V+ WGK   G LG  DE D+  P  +  L+S   V
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV 245


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 9/262 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 353 GALGHGDEIDKTLPEPLSSLKS 374
           G LGHGD  D  +P  L +LK 
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKD 281



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 112/216 (51%), Gaps = 7/216 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 224 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            +Y WG G  G LG  D  D+++PE +SS++    V
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMV 233



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 55/309 (17%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 323
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 324 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 364 TLPEPLSSL 372
             P+ + +L
Sbjct: 375 NTPKMIDAL 383



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  I+    ++  G    G LG      + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVP-EKVSSVEGEKMVLVACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  SG ++T G +     GH D    +  PR +EALK VP  Q++ G   T  +   
Sbjct: 242 SVSVSSSGALYTYGWSKYGQLGHGDFQDHLV-PRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G  D +D  +P  +  P E+   +VQ+A G  + LA+T N  ++S+
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ--KIVQVACGWRHTLALTENKNIFSW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMIDALSLDG 387



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 330 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+      +A+QG+ +    C
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPI------VALQGMKIKQIAC 133



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 3/157 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ +S+S ++++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-RKLEALKDVPISQISGGWRH 293

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V + G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            ++ + G    GQLGHG+ +DR TPK I  L   GS 
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSA 389


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 135/283 (47%), Gaps = 18/283 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 768  IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 825

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 826  SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 883

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 884  AAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 942

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 943  DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 1000

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            WGKG    LGHG +     P+P+  L+     H+AV  L  LA
Sbjct: 1001 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 1043



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 116/254 (45%), Gaps = 15/254 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQVSASENH 174
            G++   L  +  VFS G    G LGHG  TT    + V   R     A  +  V+   +H
Sbjct: 828  GKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALR-----AKKIRDVACGSSH 882

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLT 232
            +A +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT
Sbjct: 883  SAAISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALAGRRVVQVACGSRDAQTLALT 941

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V++
Sbjct: 942  EDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWT 1000

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    
Sbjct: 1001 WGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 1058

Query: 353  GALGHGDEIDKTLP 366
            G  G G+      P
Sbjct: 1059 GQQGSGNTFVNKKP 1072



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 1944

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 2004

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 2005 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 2062

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 2063 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 2092



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 14/267 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 1886 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 1941

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 1942 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 2000

Query: 229  GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T 
Sbjct: 2001 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTK 2059

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 2060 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 2117

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLK 373
            WG    G LG G       P  +++L+
Sbjct: 2118 WGDNDEGQLGDGTVTAIQRPRLVAALQ 2144



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 5/246 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 1797 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 1855

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 1856 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 1914

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 1915 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 1973

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 1974 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 2033

Query: 367  EPLSSL 372
              + SL
Sbjct: 2034 YKIESL 2039



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 115/283 (40%), Gaps = 23/283 (8%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ +    +   +   VVQV+     
Sbjct: 876  VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVTALAGRRVVQVACGSRD 934

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 935  AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 993

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 994  RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 1052

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G   +   G G      +P  +       + V RV+ G  H +A         WG    
Sbjct: 1053 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA---------WGLPNA 1101

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL-AEVCPTIVQE 394
                  DE +K  P P  S +  L    L +  AE   T+ QE
Sbjct: 1102 ST----DE-EKRGPVPFGSTRDPLGGSSLGIYEAETVQTLKQE 1139



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 237 VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 789

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 790 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHG+      P  + +L++
Sbjct: 850 KLGHGNRTTLDKPRLVEALRA 870



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 17/167 (10%)

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
            L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   +
Sbjct: 1791 LSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQSL 1842

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL + 
Sbjct: 1843 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 1902

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G VY WG+G  G LGHG+ +    P+    L  HL   G+SV    C
Sbjct: 1903 GEVYAWGEGEDGKLGHGNRMSYDRPK----LVEHL--NGMSVADIAC 1943


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 137/283 (48%), Gaps = 18/283 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 169
            + I  G     ++S +  V++CG    G LG G   T  V           +VV+   V 
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 3196

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            WGKG    LGHG +     P+P+  L+     H+AV  L  LA
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3297



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 3082 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 3139

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDG 3198

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 3199 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3257

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3258 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3315

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3316 GSGNTFVNKKP 3326



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4344



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 14/267 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4193

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4194 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4252

Query: 229  GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T 
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTK 4311

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4369

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLK 373
            WG    G LG G       P  +++L+
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVAALQ 4396



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 8/175 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 695

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH
Sbjct: 756 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH 804



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 5/246 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285

Query: 367  EPLSSL 372
              + SL
Sbjct: 4286 YKIESL 4291



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 3/132 (2%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746

Query: 348 GKGYCGALGHGD 359
           G G  G LG+G+
Sbjct: 747 GDGDYGKLGNGN 758



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 118/283 (41%), Gaps = 23/283 (8%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG  TTQ +    +   +   VVQV+     
Sbjct: 3130 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRD 3188

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3189 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3247

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 3248 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3306

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G   +   G G      +P  +       + V RV+ G  H +A         WG    
Sbjct: 3307 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA---------WGLPNA 3355

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL-AEVCPTIVQE 394
             +    DE +K  P P SS +  L    L +  AE   T+ QE
Sbjct: 3356 SS----DE-EKRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQE 3393



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3043

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +   R+  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L++
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRA 3124



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 20/259 (7%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           ++ V H  D+  + AG+ +   GR+   + SN + +S G+     LGHG    + V  T+
Sbjct: 608 MEEVAH--DVFISIAGHCE---GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP-TK 661

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           I       V  V    +++A +   G + T G  +    GH +++     P LV AL   
Sbjct: 662 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSL-PTLVVALSDH 720

Query: 217 PCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
               V   +G   +  LT  G V   G   +G+LG+G+      P  +   E +  V ++
Sbjct: 721 MVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILV---ESLPRVQRV 777

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSA 330
            AG  + +A++  G +Y++G  +  CLGH      +Q    PR + + + K I  V VS 
Sbjct: 778 FAGSQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSV 835

Query: 331 GDEHVVALDSSGYVYTWGK 349
              H +AL SSG V+ WG+
Sbjct: 836 A--HCLALSSSGEVFGWGR 852



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGP----SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           L +P  + + P+EEV   V I+        + LA+  N   YS+G+G +  LGHG+ H  
Sbjct: 598 LAKPEAEPL-PMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHAR 656

Query: 310 LQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             P  I    +   H V+ V  G  +  A+   G + TWG+G    LGHG+  D++LP  
Sbjct: 657 AVPTKIAALEQ---HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTL 713

Query: 369 LSSLKSHLAV 378
           + +L  H+ V
Sbjct: 714 VVALSDHMVV 723



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 17/168 (10%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4042 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G VY WG+G  G LGHG+ +    P+    L  HL   G+SV    C
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPK----LVEHL--NGMSVADIAC 4195


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 7/255 (2%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +  G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 69  ISVICGADHTIAYSESHTDVYSWGWGDFGRLGHG-NSSDLFTPQPIRQLHGLKIKQIACG 127

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   GQV + G N +   G   T   +  P+ ++A +GVP K V AG   T  +
Sbjct: 128 DSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ ++ L     +V +A G  + ++V+ +G +Y
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLY 245

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G      LGHG+  D L P  ++    +G  + ++S G  H +A+ S G +Y WG   
Sbjct: 246 TYGWSKYGQLGHGDYADHLIPHQLEAL--QGSFISQISGGWRHTMAVTSDGKLYGWGWNK 303

Query: 352 CGALGHGDEIDKTLP 366
            G +G GD +D++ P
Sbjct: 304 FGQVGVGDNVDRSSP 318



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S + V + G    G LGHG +    +S T ++      ++ V    +H
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHG-DAQDRLSPTILSTLEGLEIISVICGADH 77

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      V++ G       GH +++  +F P+ +  L G+  KQ+  G +    +T+
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSS-DLFTPQPIRQLHGLKIKQIACGDSHCLAVTM 136

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   + V  +  +AAG  +  AVT +G +Y +
Sbjct: 137 EGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-PIKMVAAGAEHTAAVTEDGELYGW 195

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  +      G  +V V+ G  H +++ SSG +YT+G    G
Sbjct: 196 GWGRYGNLGLGDRKDRLVPEKVSL--PHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYG 253

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  L +L+     Q
Sbjct: 254 QLGHGDYADHLIPHQLEALQGSFISQ 279



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 5/207 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V T G       GH D    +  P ++  L+G+    V  G
Sbjct: 16  VLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL-SPTILSTLEGLEIISVICG 74

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ LA
Sbjct: 75  ADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGL-KIKQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   G 
Sbjct: 134 VTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVPIKMVAAGAEHTAAVTEDGE 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +Y WG G  G LG GD  D+ +PE +S
Sbjct: 192 LYGWGWGRYGNLGLGDRKDRLVPEKVS 218



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++ P    +V V+    H
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVP-EKVSLPHGEKMVMVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+G    Q++ G   T  +T  
Sbjct: 235 TISVSSSGGLYTYGWSKYGQLGHGDYADHLI-PHQLEALQGSFISQISGGWRHTMAVTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  PLE+   V+ I+ G  + LAVT    V+S+
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQ--KVILISCGWRHTLAVTERQNVFSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG+GE  D   P  I+     G
Sbjct: 352 GRGTNGQLGNGECTDRNVPVIIKALSVDG 380



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 6/64 (9%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
           V+ +SAG  H VAL S   V TWG+G  G LGHGD  D+  P  LS+L      +GL ++
Sbjct: 16  VLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTL------EGLEII 69

Query: 385 AEVC 388
           + +C
Sbjct: 70  SVIC 73


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +  +VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G+ V++V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALP 276

Query: 367 EPLSSLKSHLA 377
             +++ K  +A
Sbjct: 277 TLINTDKERMA 287



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 5/155 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP   +A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSL-SYGTGPHVAIA-TAD 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+S+G      LG+G  +  L P  + T    G  V+ V+ G  H +AL + G V+ W
Sbjct: 94  GEVFSWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           G    G +G G   ++  P  +SS   + AV  ++
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIA 187


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 100

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 278 DSMNDEVNP 286



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LGH   T   V+  R I   +   ++QVS  
Sbjct: 88  IHVACGESHSLALSDQGQLFSWGAGSDGQLGH-TTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G N     G          P+ V++L+G+P  QV AG   +  L
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL 206

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 207 SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 265

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 324 ARGQLGTGHTCNVKCPSP---VKGHWA 347



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVV 246


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 9/262 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 353 GALGHGDEIDKTLPEPLSSLKS 374
           G LGHGD  D  +P  L +LK 
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKD 281



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 112/216 (51%), Gaps = 7/216 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 224 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            +Y WG G  G LG  D  D+++PE +SS++    V
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMV 233



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 55/309 (17%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 323
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 324 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 364 TLPEPLSSL 372
             P+ + +L
Sbjct: 375 NTPKMIDAL 383



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  I+    ++  G    G LG      + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVP-EKVSSVEGEKMVLVACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  SG ++T G +     GH D    +  PR +EALK VP  Q++ G   T  +   
Sbjct: 242 SVSVSSSGALYTYGWSKYGQLGHGDFQDHLV-PRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G  D +D  +P  +  P E+   +VQ+A G  + LA+T N  ++S+
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ--KIVQVACGWRHTLALTENKNIFSW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMIDALSLDG 387



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 330 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+      +A+QG+ +    C
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPI------VALQGMKIKQIAC 133



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ +S+S ++++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-RKLEALKDVPISQISGGWRH 293

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V + G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-------------VQIAAGPSYM 281
            ++ + G    GQLGHG+ +DR TPK I  L   GS              V++   PS  
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACKQLESSNVVPMTVKVWVSPSER 412

Query: 282 LAVTGNGVVYSFGSGSN 298
            A+  +  V   G+G++
Sbjct: 413 FALVPDENVCKSGNGTD 429


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 115/226 (50%), Gaps = 19/226 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDH 532



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 137/306 (44%), Gaps = 26/306 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L +  +  ++A G S
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDH-NFRKVACGHS 542

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G V++ GS     LG   Q D   P  ++  R    +V  ++ G  HV  + 
Sbjct: 543 LTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVT 600

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC--PTIVQE 394
               VYTWGKG  G LGHGD+ D+  P  + +LK         G +  A VC    +   
Sbjct: 601 LKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGA 660

Query: 395 DTRSCS 400
           D  +CS
Sbjct: 661 DQNACS 666



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLK 466


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 134/292 (45%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   +++ P    HV  +S  
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KKLHGPLEGIHVSSISCG 428

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   V  +GQ+FT GD S    GH D    +  P+ VE+LKG+   +   G+  T  +
Sbjct: 429 PFHTVIVTSAGQLFTFGDGSFGVLGHGD-RESLSVPKEVESLKGLRTVRAACGVWHTAAV 487

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHC 546

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 547 LTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNF-VEEISCGAYHVAVLT 604

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL---AVQGLSVLAEVC 388
           S   VYTWGKG  G LGHG+  DK  P  + +LK       V G +  A +C
Sbjct: 605 SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAIC 656



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 19/237 (8%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  +  P+L+
Sbjct: 301 CLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGH-GVDCDVAHPKLI 359

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEE 267
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 360 DALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           +  V  I+ GP + + VT  G +++FG GS   LGHG++     P+ +++   KG+  VR
Sbjct: 420 I-HVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESL--KGLRTVR 476

Query: 328 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 477 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAAL 533



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      ++ +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALT 363

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 364 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHG-PLEGIH 421

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H V + S+G ++T+G G  G LGHGD    ++P+ + SLK
Sbjct: 422 VSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLK 470



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   V+  G +YS+G  S   LGHG   D   P+ I       I +V  + 
Sbjct: 315 VQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELV--AC 372

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G+ H  A+  SG +YTWG G    G LGHG++I   +P+ L     H  ++G+ V +  C
Sbjct: 373 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKL-----HGPLEGIHVSSISC 427



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS++ G LG+ P+    +            V ++S    
Sbjct: 540 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVEEISCGAY 598

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH +T+     P LVEALK    + V  G NFT  + I
Sbjct: 599 HVAVLTSRTEVYTWGKGANGRLGHGNTDDK-NTPTLVEALKDKQVRNVVCGTNFTAAICI 657


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L+    +F  G++  G LG G    + +     ++F  A+ + Q++  EN+   +   G+
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSN
Sbjct: 103 IYSCGNNDYGQLGHEQGRK---RLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSN 159

Query: 244 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           + GQLG +       +P+ +  L     +VQIA G  + LA+T NG +YS+GS S   LG
Sbjct: 160 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQIACGMKHALALTNNGELYSWGSNSEGQLG 218

Query: 303 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 219 LGVDIRCEMKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 276

Query: 362 DKTLPEPLSSLKS 374
           ++ LP  L +L++
Sbjct: 277 NRNLPYQLQTLRN 289



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQ++    HA  
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++  G +
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 259

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRN-AKVCYAACGEEFSVFLTVDGGVFTCGAGM 318

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 319 YGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376

Query: 357 HGDEIDKTLPE 367
           +      T P+
Sbjct: 377 NNSTRSTTTPQ 387



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 122/270 (45%), Gaps = 14/270 (5%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCV-SFTRINFPSAAHVVQVSA 170
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +       F  AA       
Sbjct: 86  QIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKKAA------C 139

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H   V + GQ+F+ G NS    G    N     PR+V+ L      Q+  G+     
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 231 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G 
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGV-PIAFIACGGYHSIAISKSGA 258

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++ +G  +   LG  +  +   P  +QT R     V   + G+E  V L   G V+T G 
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNA--KVCYAACGEEFSVFLTVDGGVFTCGA 316

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LGHG   ++ LP  +  L      Q
Sbjct: 317 GMYGQLGHGSNNNEILPRQVMELMGSTVTQ 346



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S ++F  G +  G LG      + + + ++     A V   +  E  
Sbjct: 243 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPY-QLQTLRNAKVCYAACGEEF 301

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 302 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 360

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +G V+  G    GQLG+  T    TP+ +
Sbjct: 361 QGRVYAWGLGGAGQLGNNSTRSTTTPQVV 389


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 13/266 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      QV
Sbjct: 83  GQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQV 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG V+T+G G CG LGH    D+  P
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNP 285



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%), Gaps = 8/217 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G V+ WGK   G LG  DE D+  P  +  L+S   V
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV 245


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 17/268 (6%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3146 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G  
Sbjct: 3204 FSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLG 3261

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 301
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3262 EYGRLGHGDNSTQLKPKLVAALAGR-RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3320

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 3321 GRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3378

Query: 362  DKTLPEPLSSLKS----HLAVQGLSVLA 385
                P+P++ L+     H+AV  L  LA
Sbjct: 3379 HVRKPQPIAGLRGRRVIHVAVGALHCLA 3406



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    +  +  V+   +H+A 
Sbjct: 3191 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAA 3248

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3249 ISSQGELYTWGLGEYGRLGHGD-NSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDG 3307

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3308 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3366

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3424

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3425 GSGNTFVNKKP 3435



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 14/252 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  +
Sbjct: 4325 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADI 4380

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4381 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDA 4439

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4440 QTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4498

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4499 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4556

Query: 347  WGKGYCGALGHG 358
            WG    G LG G
Sbjct: 4557 WGDNDEGQLGDG 4568



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4326 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 4383

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 4384 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 4443

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4444 INDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4501

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 4502 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4531



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4236 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4294

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4295 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4353

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4354 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4412

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + ++    V++WG G  G LG G      LP
Sbjct: 4413 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLP 4472

Query: 367  EPLSSLKSHLAVQGLSVLAEVC 388
              + SL       GL V+   C
Sbjct: 4473 YKIESLA------GLGVIKVEC 4488



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 14/189 (7%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3142 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3199

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3200 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 3256

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 3257 TWGLGEYGRLGHGDNSTQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314

Query: 350  GYCGALGHG 358
            G  G LG G
Sbjct: 3315 GDFGKLGRG 3323



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 91/174 (52%), Gaps = 9/174 (5%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G+      GH DT+      ++    + V  K V  G +++  +T  G+++T G  T
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKITLLDRCV--KAVFCGCSYSAAITCSGNLYTWGRGT 699

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           + +LGHG++ D+P P  +  L E   + V + +G ++ L +T  G VY++G      LG+
Sbjct: 700 YARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGN 759

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           G  +  + P  +++  +    V RV AG +  +AL + G +Y+WGK  C  LGH
Sbjct: 760 GNLNGSMSPVLVESLPK----VQRVFAGAQFSMALTTDGQLYSWGKASC--LGH 807



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 6/161 (3%)

Query: 202 RPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           +P   P+L+E +       + +   G +F   + I  + ++ G+    +LGHGDT  R  
Sbjct: 604 KPETEPQLLEEIAHETIVSIASHCEGRHFMA-IDINRNAYSWGNGEDHRLGHGDTHARAV 662

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P  I  L+    V  +  G SY  A+T +G +Y++G G+   LGHG   D+  P  +   
Sbjct: 663 PTKITLLDRC--VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMAL 720

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
               I  V + +GD H + L S G+VY WG    G LG+G+
Sbjct: 721 TEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGN 761



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 103/237 (43%), Gaps = 10/237 (4%)

Query: 106  IVET--SAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            +VET  S     +  G  H+  IS+   +++ G    G LGHG  +TQ +    +   + 
Sbjct: 3227 LVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQ-LKPKLVAALAG 3285

Query: 163  AHVVQVSASENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              V+QV+     A    + + G VF+ GD      G R  +     P  +E L G+   Q
Sbjct: 3286 RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVIQ 3344

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G  F+  LT  G V T G   + +LGHG       P+ IA L     V+ +A G  +
Sbjct: 3345 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGR-RVIHVAVGALH 3403

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             LAVT  G VY++G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3404 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3458



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 3152

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L+S
Sbjct: 3213 KLGHGNRTTLDKPRLVETLRS 3233



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 265 LEEVG--SVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           LEE+   ++V IA+     + +A+  N   YS+G+G +  LGHG+ H    P  I    R
Sbjct: 612 LEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDR 671

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
               V  V  G  +  A+  SG +YTWG+G    LGHG+  D+ LP  + +L  H
Sbjct: 672 C---VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEH 723



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 11/147 (7%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4229 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4280

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4281 LFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4340

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPE 367
             G VY WG+G  G LGHG+ +    P+
Sbjct: 4341 EGEVYAWGEGEDGKLGHGNRMSYDRPK 4367


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 135/283 (47%), Gaps = 18/283 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 2677 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 2734

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 2735 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 2792

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 2793 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 2851

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 2852 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 2909

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            WGKG    LGHG +     P+P+  L+     H+AV  L  LA
Sbjct: 2910 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 2952



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 2737 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 2794

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 2795 ISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDG 2853

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 2854 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 2912

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 2913 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 2970

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 2971 GSGNTFVNKKP 2981



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 8/175 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 291 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 349

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 350 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 409

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH
Sbjct: 410 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH 458



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 3/132 (2%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 282 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 340

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 400

Query: 348 GKGYCGALGHGD 359
           G G  G LG+G+
Sbjct: 401 GDGDYGKLGNGN 412



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG  TTQ +    +   +   VVQV+     
Sbjct: 2785 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRD 2843

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 2844 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 2902

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 2903 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 2961

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 2962 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3004



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 2698

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L++
Sbjct: 2759 KLGHGNRTTLDKPRLVEALRA 2779



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 20/259 (7%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           ++ V H  D+  + AG+ +   GR+   + SN + +S G+     LGHG    + V  T+
Sbjct: 262 MEEVAH--DVFISIAGHCE---GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP-TK 315

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           I       V  V    +++A +   G + T G  +    GH +++     P LV AL   
Sbjct: 316 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSL-PTLVVALSDH 374

Query: 217 PCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
               V   +G   +  LT  G V   G   +G+LG+G+      P  +   E +  V ++
Sbjct: 375 MVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILV---ESLPRVQRV 431

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSA 330
            AG  + +A++  G +Y++G  +  CLGH      +Q    PR + + + K I  V VS 
Sbjct: 432 FAGSQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSV 489

Query: 331 GDEHVVALDSSGYVYTWGK 349
              H +AL SSG V+ WG+
Sbjct: 490 A--HCLALSSSGEVFGWGR 506



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGP----SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           L +P  + + P+EEV   V I+        + LA+  N   YS+G+G +  LGHG+ H  
Sbjct: 252 LAKPEAEPL-PMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHAR 310

Query: 310 LQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             P  I    +   H V+ V  G  +  A+   G + TWG+G    LGHG+  D++LP  
Sbjct: 311 AVPTKIAALEQ---HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTL 367

Query: 369 LSSLKSHLAV 378
           + +L  H+ V
Sbjct: 368 VVALSDHMVV 377


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 5/211 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G +Y WG G  G LG GD  D+ +PE +SS+
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSV 219



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   +H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGADH 76

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 136 EGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 194

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G    G
Sbjct: 195 GWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSKYG 252

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHG+  D  +P+ L +L   L  Q
Sbjct: 253 QLGHGNFEDSLVPQKLQALSDKLISQ 278



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 55/309 (17%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 323
           G      LGHG   D L P+ +Q    K I                              
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV 306

Query: 324 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                                VV++S G  H +A+     V++WG+G  G LGHGD +D+
Sbjct: 307 GVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR 366

Query: 364 TLPEPLSSL 372
             P+ + +L
Sbjct: 367 NSPKIIEAL 375



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIP-EKVSSVDCDKMVMVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH +    +  P+ ++AL      QV+ G   +  LT  
Sbjct: 234 TISVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTST 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  P ++   VVQI+ G  + +AVT    V+S+
Sbjct: 293 GLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVVQISCGWRHTIAVTEKENVFSW 350

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHG+  D   P+ I+     G
Sbjct: 351 GRGTNGQLGHGDTVDRNSPKIIEALSVDG 379



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+   +++ G S  G LGHG      V   ++   S   + QVS   
Sbjct: 225 VMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVP-QKLQALSDKLISQVSGGW 283

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G ++  G N     G  D N     P  V+        Q++ G   T  +T
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVT 342

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            + +V + G  T+GQLGHGDT+DR +PK I  L   GS
Sbjct: 343 EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGS 380


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 19/226 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T  G ++T G  TH  G LGHG+ +   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                      SG ++TWG G    LGHGD+  K +P  +++L  H
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 132/291 (45%), Gaps = 24/291 (8%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   ++  +Q +  G YH+  ++ S     +  G+   G+LGHG   +      
Sbjct: 163 VAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTP-K 221

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+  P     V  V+    H   V  +GQ+F+ GD +    GH D  +    PR VE+LK
Sbjct: 222 RVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLK 280

Query: 215 GVPCKQVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G   T  +            ++ G + T G     +LGHGD   +  P  +
Sbjct: 281 GLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCV 340

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L +  +  Q+A G S  +A+T  G +Y+ GS S   LG  +    L P  ++  R   
Sbjct: 341 AALVD-HNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR--- 395

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +  VS G  HV AL S G V TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 396 TLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALR 446



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F PR V +L  +  +Q+  G+     +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 321
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGG-PLE 228

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK      GL
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLK------GL 282

Query: 382 SVLAEVC 388
             L   C
Sbjct: 283 KTLRAAC 289



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 22/252 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT+L+ S   +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 280
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 341 SGYVYTWGKGYC 352
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 132/265 (49%), Gaps = 15/265 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G ++  C     I F S   +  V V +   HA  + Q G++F+ 
Sbjct: 3307 KLYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSW 3365

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+
Sbjct: 3366 GEGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3424

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3425 LGHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3482

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++    
Sbjct: 3483 GSDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVR 3540

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P  +  L+     H+AV  L  LA
Sbjct: 3541 KPTLVEGLRGKKVVHVAVGALHCLA 3565



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  +FS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3350 GKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDIACGSGHS 3405

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DT   + +P+LV++L G    QV  G     T  LT 
Sbjct: 3406 AAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3464

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3465 DGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3523

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3524 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG 3581

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3582 QQGNGSTIVNKKP 3594



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 16/268 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 168
            +Q+T G    L ++ +  V++ G    G LG G   +  V        S  HV    V V
Sbjct: 4295 VQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAV 4351

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 227
            ++   H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + 
Sbjct: 4352 NSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHH 4409

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVT 285
            +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT
Sbjct: 4410 SAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVT 4468

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +Y
Sbjct: 4469 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIY 4526

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            TWGKG    LGHG +     P  +++L+
Sbjct: 4527 TWGKGDYHRLGHGTDDHVRRPRKVAALQ 4554



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 12/231 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4290 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4348

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4349 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4406

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4407 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4466

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            +     V++WG G  G LG G      +P  + SL       GL V+   C
Sbjct: 4467 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLA------GLGVIKVEC 4511



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      + +
Sbjct: 4337 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LMY 4386

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+LVE
Sbjct: 4387 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVE 4445

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4446 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4505

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4506 -VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4562

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4563 TGSLHCVACTDKGEVFTWGDNDEGQLGDG 4591



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 23/261 (8%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 504 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 555

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 227
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 556 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVYVACGSGDSQ 614

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 615 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 673

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G G  + LGHG +     P+ I+  + K   V  +  G+ HV+AL     VY W
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPK--KVKELCVGNFHVLALTEDQLVYGW 731

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G+   G +     +   +PEP
Sbjct: 732 GRNDYGQIDPA--LGTIVPEP 750



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 4283 PVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQ 4342

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 4343 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELL--GTEI 4400

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++ G  H  A+ S+G++YTWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 4401 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI 4453



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 3/177 (1%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3275 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3334

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + +   V + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3335 FLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3394

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +Q
Sbjct: 3395 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQ 3449



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 14/214 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3273 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3331

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            L+  L     K+V   +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3332 LIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3391

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3392 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3448

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHG 358
            +V+ G  D   +AL + G VY+WG G  G LG G
Sbjct: 3449 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3482



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   + Q   V++ G+      GH D  R  +  P+LVEAL       +  G  ++  L+
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGD--RVWYDEPKLVEALVDKNITFIACGSTYSAVLS 565

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVY 291
             G ++T G   +G+LGHG++ +   P  +  L   +   V   +G S  L VT +G+V+
Sbjct: 566 SNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 625

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G G+   LG G       P+ +       I+V +V  G +   AL + G VYTWGKG 
Sbjct: 626 SWGDGNYGKLGRGGCDGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKGE 683

Query: 352 CGALGHGDEIDKTLPEPLSSLK----SHLAVQGLSVLA 385
              LGHG+E     P+ +  LK      L V    VLA
Sbjct: 684 GYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLA 721



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 7/141 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4314

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4374

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LGHG+ +    P+ +  L
Sbjct: 4375 DGKLGHGNRLMYDRPKLIEEL 4395



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3312

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G +++WG+G  G 
Sbjct: 3313 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGK 3372

Query: 355  LGHGDEIDKTLPEPLSSLKS 374
            LGHG+ +    P  + SLKS
Sbjct: 3373 LGHGNSVSLDKPRLIESLKS 3392



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 2/100 (2%)

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ LA+T +  VYS+G+G    LGHG++    +P+ ++    K I  +  + G  +   L
Sbjct: 507 THYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFI--ACGSTYSAVL 564

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            S+G +YTWG+G  G LGHG+  +  +P  +++L  H+ V
Sbjct: 565 SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVV 604



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   +       V+ V+   
Sbjct: 4401 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLVEALQDYKVIDVACGS 4459

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4460 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVA 4518

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4519 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4577

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4578 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4622



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++ SV+S G    G LG G  +  C +   I+  +   VVQ+      +  + + G+V
Sbjct: 3462 LTADGSVYSWGDGDFGKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3520

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + +P LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3521 WTWGKGDYFRLGHGNDHH-VRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDND 3579

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G+G T+    P  +  L++   V +++ G S+ +A
Sbjct: 3580 HGQQGNGSTIVNKKPSLVHELDD-ARVNRVSCGSSHSIA 3617



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+++GN  +  +GS + +            P+ +  F  K + ++   +   H +AL  
Sbjct: 467 ILSISGNVYMMYYGSETQY------------PQRVYGFSEKPVTMIASHSDGTHYLALTQ 514

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              VY+WG G  G LGHGD +    P+ + +L
Sbjct: 515 DSSVYSWGNGDGGRLGHGDRVWYDEPKLVEAL 546


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 5/244 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL  +    VF+ GS+  G LG   E +   +   +   +   VVQ++   +
Sbjct: 88  QVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRS 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G+++  G NS    G   +  P  +P LV+ L+G+P   ++ G +F+  +T 
Sbjct: 148 HSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTP 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N+ GQLG GDT DRP P  +  L     V  I  G  +  A+T +G V++F
Sbjct: 208 SGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSL-RFQRVTYIRCGMDHTAALTRDGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH    +E+ PR +      G  V ++  G  H +A + S G +Y +G G  
Sbjct: 267 GAGMYGQLGHCTSANEMLPRKV--LELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGS 324

Query: 353 GALG 356
           G LG
Sbjct: 325 GQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 12/263 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
           +Q+  G  HT+L+  +  +FS G +  G LGH      C S TR   ++   A ++ QV+
Sbjct: 37  VQVGCGENHTILVMKDGKLFSFGLNDYGQLGH------CRSRTRAEPVDGLEAHNITQVA 90

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H     + G+VF  G NS+   G       +  P++V++L      Q+  G + + 
Sbjct: 91  CGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSM 150

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT  G ++  GSN+HGQLG G +    T   +  L +   +  I+ G  +  AVT +G 
Sbjct: 151 ALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGA 210

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +G  S   LG G+  D  QP  +++ R + +  +R   G +H  AL   G V+T+G 
Sbjct: 211 VYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR--CGMDHTAALTRDGGVFTFGA 268

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
           G  G LGH    ++ LP  +  L
Sbjct: 269 GMYGQLGHCTSANEMLPRKVLEL 291



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 106/217 (48%), Gaps = 8/217 (3%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F     +VQV   ENH   V++ G++F+ G N     GH    R   R   V+ L+    
Sbjct: 30  FTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGH---CRSRTRAEPVDGLEAHNI 86

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            QV  G   T      G V   GSN++GQLG + +    PTPK +  L     VVQIA G
Sbjct: 87  TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSL-ATKQVVQIACG 145

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            S+ +A+T  G +Y +GS S+  LG G     E +P  ++    +GI +  +S G +   
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLL--QGIPISHISCGADFSF 203

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           A+  SG VY WGK   G LG GD  D+  P  L SL+
Sbjct: 204 AVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLR 240



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           +P++ +P   V  +VQ+  G ++ + V  +G ++SFG      LGH       +P     
Sbjct: 24  SPRA-SPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----V 78

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSH 375
              +  ++ +V+ G +H +A +  G V+ WG    G LG   E +  +P P  + SL + 
Sbjct: 79  DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVE-ESMMPTPKMVKSLATK 137

Query: 376 LAVQ 379
             VQ
Sbjct: 138 QVVQ 141


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 124/269 (46%), Gaps = 13/269 (4%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+I  G  H+L ++   +V++ G +  G LG    + Q +S  R+  P    +V V + +
Sbjct: 69  MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARL--PVLEDIVSVVSGD 126

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+T G NSS   G   T      P+ VE    V    V AG   +  L 
Sbjct: 127 AHSLALGADGTVWTWGSNSSGQLGD-GTTTDRAEPQRVEGFTDVVA--VAAGDFHSLVLK 183

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G+N HGQLG G T     PK +  LE    VV +AAG  + LAV  +G V S
Sbjct: 184 SDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLE---GVVALAAGFDFTLAVHADGAVSS 240

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+ S   LG G     L P  I T       +  V+AG  H VAL   G V+TWG    
Sbjct: 241 WGANSFGQLGLGTFTQRLSPERIPTLS----GITSVAAGTYHAVALGKDGTVWTWGSNSS 296

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G LG G   D+ +P PL  +    AV  L
Sbjct: 297 GQLGDGTWNDRAVPAPLPGVGGARAVASL 325



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 126/267 (47%), Gaps = 16/267 (5%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + TG +H+L  + + SV++ G +  G LG G  T + V       PS   V  V+A+ +H
Sbjct: 422 MATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS---VRAVAAAGHH 478

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+T G N++   G   T R   RP  V  L  V    + AG +    L   
Sbjct: 479 SIAVAMDGTVWTWGRNAAGQLGD-GTTRDRARPVAVSGLTSVLA--IAAGGSHVLALRSD 535

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N  GQLG G + D+ TP  +  L  + SV   AAG  + +A+  +G V+++G
Sbjct: 536 GDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQSV---AAGTYFSMALANDGTVWTWG 592

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 353
            G    LG G     L P A+     KG+  +R +S G  H +A+   G V+ WG    G
Sbjct: 593 EGFEGQLGDGGGVQRLSPVAV-----KGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEG 647

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            LG G  +D+  P  + +L    AV G
Sbjct: 648 QLGDGSWMDRFAPVQVRNLTGITAVSG 674



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 157/387 (40%), Gaps = 82/387 (21%)

Query: 50  PQKFRSLVDLAASQLCALHS--------IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSV 100
           PQ+     D+ A      HS        ++A G + + Q+   +   G W + +  L+ V
Sbjct: 160 PQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV 219

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
                        + +  G   TL + ++ +V S G++  G LG G   TQ +S  RI  
Sbjct: 220 -------------VALAAGFDFTLAVHADGAVSSWGANSFGQLGLG-TFTQRLSPERI-- 263

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPC 218
           P+ + +  V+A   HA  + + G V+T G NSS   G    N R +  P     L GV  
Sbjct: 264 PTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP-----LPGVGG 318

Query: 219 KQVTAGLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            +  A L+      + G  V   G+N  GQLG GDT DR TP S+ P  E+ +V  +  G
Sbjct: 319 ARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTP-SLVP--ELSAVTAVVGG 375

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF------------------- 318
             + LA+  +G ++++G G    LGHG     + P  +                      
Sbjct: 376 AQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALED 435

Query: 319 --------------------------RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGY 351
                                     R  G+  VR V+A   H +A+   G V+TWG+  
Sbjct: 436 GSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNA 495

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LG G   D+  P  +S L S LA+
Sbjct: 496 AGQLGDGTTRDRARPVAVSGLTSVLAI 522



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 123/273 (45%), Gaps = 19/273 (6%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV-SF 154
            + Q V   SD+   +AG       ++   +  + + FS GS+  G LG G    +   + 
Sbjct: 1060 WPQRVAELSDVESVAAGE------QFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAE 1113

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
             +I    A  VV V A   HA  ++  G +   GDN++   G   T R   R    E ++
Sbjct: 1114 VKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTR---RSSPGE-IR 1169

Query: 215  GVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            GV     V+ G   +  L + G V   G+N  GQLG G T  R  P    P++ +  VV 
Sbjct: 1170 GVTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVP---VPVQGLRDVVA 1226

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            IAAG  + +AV  +G V+++G  +   LG G       P  +Q  + +G+  V  + GD 
Sbjct: 1227 IAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALP--VQVHKLEGVQAV--TGGDH 1282

Query: 334  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            H +AL + G V  WG    G LG G   D+  P
Sbjct: 1283 HSLALHADGTVSGWGHNASGQLGDGSRTDRYTP 1315



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 118/267 (44%), Gaps = 11/267 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M I  G  H L +  + +V++ G++  G LG G ET    S           V  V+A  
Sbjct: 920  MVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP---SLLPARVKGLEGVGSVAAGR 976

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +  V   G  +  G N S   G   +N+    P  V ++KG+  + V+AG +    L 
Sbjct: 977  AFSLAVRDDGTAWAWGANESGQLGD-GSNQSRRVPHRVASVKGL--RAVSAGAHHAMALG 1033

Query: 233  IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G NT GQLG G +      P+ +A L +V SV   AAG  + +AV  +G  +
Sbjct: 1034 EDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESV---AAGEQFSVAVAHDGTAF 1090

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            S+GS     LG G+    L P  ++    K   VV V A  +H VAL + G +  WG   
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LG G    ++ P  +  +    AV
Sbjct: 1151 TGQLGDGTTTRRSSPGEIRGVTRVTAV 1177



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 130/326 (39%), Gaps = 30/326 (9%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRC----NGNW--KRVLRFLQSVE 101
           L P++  +L  + +      H++  G    V     N      +G W  + V   L  V 
Sbjct: 258 LSPERIPTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVG 317

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            +  +    AG++          L+    V + G++  G LG G    +    T    P 
Sbjct: 318 GARAVASLDAGSLA---------LLEGGDVLAWGANNSGQLGDGDTADRS---TPSLVPE 365

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            + V  V     HA  + + G ++  G   +   GH  + R +  P  V  L  V     
Sbjct: 366 LSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVV-PATVMGLTNVTSMAT 424

Query: 222 TAGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
               +F     +  G V   G N++GQLG G   +R  P  +  L    SV  +AA   +
Sbjct: 425 G---SFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLP---SVRAVAAAGHH 478

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +AV  +G V+++G  +   LG G   D  +P A+         V+ ++AG  HV+AL S
Sbjct: 479 SIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGL----TSVLAIAAGGSHVLALRS 534

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
            G V+ WG    G LG G   DK  P
Sbjct: 535 DGDVWAWGYNALGQLGDGTSGDKLTP 560



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 115/277 (41%), Gaps = 13/277 (4%)

Query: 107  VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            V +  G   ++ G +H + L  + +V++ G +  G LG G      +   R+   S   V
Sbjct: 1013 VASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS--DV 1070

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTA 223
              V+A E  +  V   G  F+ G N     G   T  P   P  V+    K      V A
Sbjct: 1071 ESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTG-PRLSPAEVKIGGSKARTVVTVGA 1129

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                   L   G +   G N  GQLG G T  R +P  I     V  V  ++ G  + LA
Sbjct: 1130 WGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEI---RGVTRVTAVSTGAWHSLA 1186

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  +G V+++G+     LG G       P  +Q  R     VV ++AG  H VA+ S G 
Sbjct: 1187 LRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLR----DVVAIAAGGYHSVAVRSDGT 1242

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            V+TWG    G LG G    + LP  +  L+   AV G
Sbjct: 1243 VWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQAVTG 1279



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 22/273 (8%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++TG +H+L +  + +V++ G++  G LG G  T + V    +       VV ++A   H
Sbjct: 1177 VSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVP---VPVQGLRDVVAIAAGGYH 1233

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +  V   G V+T G N+    G   T+     P  V  L+GV  + VT G + +  L   
Sbjct: 1234 SVAVRSDGTVWTWGYNTFGQLGD-GTSESRALPVQVHKLEGV--QAVTGGDHHSLALHAD 1290

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V   G N  GQLG G   DR TP     L++V  + ++ AG ++ +A+  +G V+++G
Sbjct: 1291 GTVSGWGHNASGQLGDGSRTDRYTPVR---LKDVDGLTEVRAGAAHTVALGKDGTVWTWG 1347

Query: 295  SGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
              ++  LG G     ++  P+ +            + AG  H  A       +TWG+   
Sbjct: 1348 DNAHGQLGDGVTGPRMRLVPKPVSGLP----AATAIGAGAWHSFASGPEEGAFTWGRNSH 1403

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            G LG GD   +  P+ +  L       GL V+A
Sbjct: 1404 GQLGVGDNAPRAEPQRMKLLS------GLKVIA 1430



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 123/315 (39%), Gaps = 62/315 (19%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G Y ++ ++N  +V++ G    G LG G    +    + +     + +  +S    H
Sbjct: 572 VAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR---LSPVAVKGLSDIRNISVGSAH 628

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  V   G V+  GDN+    G   +    F P  V  L G+    V+ G + +  L   
Sbjct: 629 ALAVRGDGTVWAWGDNNEGQLGD-GSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHAD 685

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----------------------------- 265
           G V   GSN +GQLG G    R  P  I  L                             
Sbjct: 686 GTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNR 745

Query: 266 ------------------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQ 306
                               +G V ++AAG ++ L V  +G V ++G+ ++  LG G   
Sbjct: 746 FGQLGLGAAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTT 805

Query: 307 HDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           H     RA+     +G+   R V++G +H + L   G V+TWG+   G LG G    +  
Sbjct: 806 HGA---RAVTV---RGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVA 859

Query: 366 PEPLSSLKSHLAVQG 380
           P  +  L+  +AV G
Sbjct: 860 PGRVEGLEGIVAVAG 874



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 12/196 (6%)

Query: 112  GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G   +T G +H+L + ++ +V   G +  G LG G  T +   +T +       + +V A
Sbjct: 1273 GVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDR---YTPVRLKDVDGLTEVRA 1329

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQVTAGLNFTG 229
               H   + + G V+T GDN+    G   T     R RLV + + G+P         +  
Sbjct: 1330 GAAHTVALGKDGTVWTWGDNAHGQLGDGVTGP---RMRLVPKPVSGLPAATAIGAGAWHS 1386

Query: 230  FLT-IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            F +       T G N+HGQLG GD   R  P+ +  L     +  IA G    LA+T  G
Sbjct: 1387 FASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLS---GLKVIAGGADTSLAMTQEG 1443

Query: 289  VVYSFGSGSNFCLGHG 304
            V+ S+GS  +  LG G
Sbjct: 1444 VLMSWGSSLHGTLGLG 1459



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 34/293 (11%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAA 163
           G   ++ GR H+L + ++ +V + GS+  G LG G       P     +S  +   P   
Sbjct: 668 GITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHL 727

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVT 222
           HV+ +     HA   L+       G       G   + RP+        ++G+   +++ 
Sbjct: 728 HVLAL-----HADKTLRGWGYNRFGQLGLGAAGW--SARPV-------QVRGIGRVERLA 773

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG      +   G V   G+N  GQLG G T       ++     V     +A+G  + L
Sbjct: 774 AGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVTV---RGVSCARSVASGGQHSL 830

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +  +G V+++G      LG G     + P  ++        +V V+ G +  +AL S G
Sbjct: 831 VLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLE----GIVAVAGGGDTSLALRSDG 886

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQED 395
            V+ WG    G +G G   D+  P  + +L   + +     L E     V ED
Sbjct: 887 TVWAWGANASGQVGDGTVEDRLTPRRIEALSDVMVI----ALGESHALAVGED 935


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 130/268 (48%), Gaps = 17/268 (6%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3096 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3153

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVEAL+    + +  G + +  ++ +G ++T G  
Sbjct: 3154 FSWGEGEDGKLGH--GNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3211

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 301
             +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3212 EYGRLGHGDNATQLKPKLVTALHG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3270

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 3271 GRGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3328

Query: 362  DKTLPEPLSSLKS----HLAVQGLSVLA 385
                P+P++ L+     H+AV  L  LA
Sbjct: 3329 HVRKPQPIAGLRGRRVIHVAVGALHCLA 3356



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  +T  +   R +    A  +  ++   +H+A 
Sbjct: 3141 GKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAA 3198

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3199 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDG 3257

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3258 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3316

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3317 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3374

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3375 GSGNTFVNKKP 3385



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4289 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLLEHLNGMSVADIACG 4346

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4406

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4407 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4464

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG       P+ +++L+
Sbjct: 4465 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4494



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4291 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLLEHLNGMSVADIACG 4346

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4405

Query: 232  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4406 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4464

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYTWG 
Sbjct: 4465 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYTWGD 4522

Query: 350  GYCGALGHGDEIDKTLPEPLSSLK 373
               G LG G       P  +++L+
Sbjct: 4523 NDEGQLGDGTVTAIQRPRLVAALQ 4546



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 15/177 (8%)

Query: 185 FTCGDNSSFCCGHRD---TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           ++ G   S   GH D      P     LV  ++ V C     G +++  +T+RG+++T G
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLVRRVQSVYC-----GCSYSAAITLRGNLYTWG 693

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LGHG++ D+  P  +  L++   + V + +G ++ L +T  G+VY++G G    
Sbjct: 694 RGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGK 753

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           LG+G  +  LQP  I+   R    V RV AG +  +AL   G +Y+WGK  C  LGH
Sbjct: 754 LGNGSCNSSLQPLLIECLPR----VQRVFAGSQFSLALTCEGQLYSWGKASC--LGH 804



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 5/246 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    +Q++  E     V   G++F  G
Sbjct: 4199 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATG 4257

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4258 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4316

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4317 KLGHGNRMSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4375

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4376 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4435

Query: 367  EPLSSL 372
              + SL
Sbjct: 4436 YKIESL 4441



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 14/202 (6%)

Query: 178  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 3093 VSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3150

Query: 235  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3151 GKVFSWGEGEDGKLGHGNRSTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3207

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 350
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3208 WGLGEYGRLGHGDNATQLKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3265

Query: 351  YCGALGHGDEIDKTLPEPLSSL 372
              G LG G       P  +  L
Sbjct: 3266 DFGKLGRGGSEGSATPHEIERL 3287



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 17/199 (8%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            + QV+ SE+    + Q G+++                +P   P+L++  +      V+ 
Sbjct: 572 QLKQVACSEDMVVLLCQEGKLYNW-----------PIAKPETEPQLLDFAEIANETFVSI 620

Query: 224 GLNFTG--FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
             +  G  FL +  +   ++ G     +LGHGD   R  P  I  L  V  V  +  G S
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQSVYCGCS 678

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           Y  A+T  G +Y++G G+   LGHG   D+  P  +   +   +  V + +GD H + L 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 340 SSGYVYTWGKGYCGALGHG 358
             G VY WG G  G LG+G
Sbjct: 739 RGGLVYAWGDGDYGKLGNG 757



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 30/244 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+   + SN + +S G      LGHG        T+  S  R        V  V    +
Sbjct: 626 GRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-------RVQSVYCGCS 678

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +   G ++T G  +    GH +++     P +V ALK      V   +G   T  L
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCM-PAMVMALKDHQVLDVALGSGDAHTLCL 737

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGV 289
           T  G V+  G   +G+LG+G         S+ PL  E +  V ++ AG  + LA+T  G 
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGSC-----NSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQ 792

Query: 290 VYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           +YS+G  S  CLGH      +Q    PR I + + K   +V V+ G  H +AL S+G ++
Sbjct: 793 LYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHK--RIVHVAVGVAHCLALSSNGEIF 848

Query: 346 TWGK 349
            WG+
Sbjct: 849 GWGR 852



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSAS 171
            I  G  H+  IS+   +++ G    G LGHG   TQ     +    +A H   V+QV+  
Sbjct: 3189 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL----KPKLVTALHGRRVIQVACG 3244

Query: 172  ENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+ 
Sbjct: 3245 SRDAQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSATPHEIERLSGIGVIQIECGAQFSL 3303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V T G   + +LGHG       P+ IA L     V+ +A G  + LAVT  G 
Sbjct: 3304 ALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRG-RRVIHVAVGALHCLAVTDAGQ 3362

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3363 VYAWGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSMA 3408



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV  N   YS+G G +  LGHG+ H    P  I++  R+   V  V  G  +  A+ 
Sbjct: 628 HFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVRR---VQSVYCGCSYSAAIT 684

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             G +YTWG+G  G LGHG+  D+ +P  + +LK H
Sbjct: 685 LRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDH 720



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVYAC 3102

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3103 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L++
Sbjct: 3163 KLGHGNRSTLDKPRLVEALRA 3183



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 17/168 (10%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  +    Q+A G   
Sbjct: 4192 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPI----QLAGGEQS 4243

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4244 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4303

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G VY WG+G  G LGHG+ +    P+ L  L       G+SV    C
Sbjct: 4304 DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLN------GMSVADIAC 4345



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 7/182 (3%)

Query: 102  HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            H   +++ + G+    T      L  + +VFS G    G LG G           I   S
Sbjct: 3234 HGRRVIQVACGSRDAQT----LALTEDGAVFSWGDGDFGKLGRGGSEGSATPH-EIERLS 3288

Query: 162  AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
               V+Q+      +  + ++G+V+T G    +  GH   ++ + +P+ +  L+G     V
Sbjct: 3289 GIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH-GGDQHVRKPQPIAGLRGRRVIHV 3347

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              G      +T  G V+  G N HGQ G G+T     P  +  L+ V  V ++A G S+ 
Sbjct: 3348 AVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAV-FVNRVACGSSHS 3406

Query: 282  LA 283
            +A
Sbjct: 3407 MA 3408



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 4/169 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  +V+S G    G LG G  +  C    +I   +   V++V      + 
Sbjct: 4399 SGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGLGVIKVECGSQFSV 4457

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RP+ V AL+G     +  G       +  G 
Sbjct: 4458 ALTKSGAVYTWGKGDFHRLGHGSVDH-VRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4516

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            V+T G N  GQLG G       P+ +A L+    +V++  G ++ LA++
Sbjct: 4517 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQG-KHIVKVTCGSAHTLALS 4564


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++FT G+ S    GH   +  + +P+LV+AL     + V+ G
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGH-GVDSDVLQPKLVDALGNTNIELVSCG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK I  PLE +  V  IA GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI-HVSSIACGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                     SSG ++TWG G  G LGHGD+  K +P  +++L
Sbjct: 486 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAAL 528



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           ++ G YHT  ++ S     +  G+   G+LGHG E +  +   +IN P    HV  ++  
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP-KKINGPLEGIHVSSIACG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS-VTMPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L +  +  +++ G S
Sbjct: 483 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP-NFCRVSCGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+     ++  R      +    V  ++ G  HV  L 
Sbjct: 542 MTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKS--FVEEIACGAYHVAVLT 599

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 633



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + T G  + G+LGHG   D   PK +  L 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  ++ G  +  AVT +G +Y++G G+ NF  LGHG +     P+ I     +GIH
Sbjct: 359 NT-NIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKING-PLEGIH 416

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  ++ G  H   + S+G ++T+G G  G LGHGD    T+P  + SLK
Sbjct: 417 VSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLK 465



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G +HT +++++  +F+ G    GVLGHG   +  V+  R +        V+ +    
Sbjct: 420 IACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVW 477

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV-PTCVAALVDPNFCRV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 SCGHSMTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPVRVEGKLSKSFVEEIACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 640



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRL 209
           V  T +      +  +VS   +    +  SG V+T G       G  H D   P+   R+
Sbjct: 521 VP-TCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPV---RV 576

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
              L     +++  G      LT R  V+T G   +G+LGHGDT DR +P  +  L++  
Sbjct: 577 EGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKD-K 635

Query: 270 SVVQIAAGPSYMLAV 284
            V  IA G ++  A+
Sbjct: 636 QVKSIACGTNFTAAI 650


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    +SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAAL 528



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLK 465



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG   +  +S  R +        V+ +    
Sbjct: 420 ISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVW 477

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 478 HTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV-PTCVAALVEPNFCQV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GH++T GS  +GQLG+    D   P  +        V ++A G  ++
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQA-DGKLPARVEGKLSKSFVEELACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG   D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSI 640



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 10/137 (7%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           +D   PK++  +  V  V  IA G  +   VT  G V+S+G      LGHG   D   P+
Sbjct: 294 IDSLLPKALESVV-VLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 371
            I       I +V  + G+ H  A+  SG +YTWG G    G LGHG ++   +P+ ++ 
Sbjct: 353 LIDALSNLNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG 410

Query: 372 LKSHLAVQGLSVLAEVC 388
                 +QGL + +  C
Sbjct: 411 -----PLQGLHISSISC 422



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G  ++   S+  +F+ G    G LGHG +  + 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  VE
Sbjct: 521 VP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARVE 577

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++   
Sbjct: 578 GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-KQ 636

Query: 271 VVQIAAGPSYMLAV 284
           V  IA G ++  A+
Sbjct: 637 VKSIACGTNFTAAI 650



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAY 593

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAAICL 652

Query: 234 RGHV 237
              V
Sbjct: 653 HKWV 656


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 5/211 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G +Y WG G  G LG GD  D+ +PE +SS+
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSV 219



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 7/266 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   +H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGADH 76

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 136 EGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 194

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G    G
Sbjct: 195 GWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSKYG 252

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHG+  D  +P+ L +L   L  Q
Sbjct: 253 QLGHGNFEDSLVPQKLQALSDKLISQ 278



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 55/309 (17%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 323
           G      LGHG   D L P+ +Q    K I                              
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV 306

Query: 324 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                                VV++S G  H +A+     V++WG+G  G LGHGD +D+
Sbjct: 307 GVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR 366

Query: 364 TLPEPLSSL 372
             P+ + +L
Sbjct: 367 NSPKIIEAL 375



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIP-EKVSSVDCDKMVMVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH +    +  P+ ++AL      QV+ G   +  LT  
Sbjct: 234 TISVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTST 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  P ++   VVQI+ G  + +AVT    V+S+
Sbjct: 293 GLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVVQISCGWRHTIAVTEKENVFSW 350

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHG+  D   P+ I+     G
Sbjct: 351 GRGTNGQLGHGDTVDRNSPKIIEALSVDG 379



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+   +++ G S  G LGHG      V   ++   S   + QVS   
Sbjct: 225 VMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVP-QKLQALSDKLISQVSGGW 283

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G ++  G N     G  D N     P  V+        Q++ G   T  +T
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVT 342

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            + +V + G  T+GQLGHGDT+DR +PK I  L   GS
Sbjct: 343 EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGS 380


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+    V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-TTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKNGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLTTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVTAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 126/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QVTAG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKNGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVTAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    +SSG ++TWG G  G LGHGD+  + +P  +++L
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAAL 528



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLK 465



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG   +  +S  R +        V+ +    
Sbjct: 420 ISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVW 477

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 478 HTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV-PTCVAALVEPNFCQV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GH++T GS  +GQLG+    D   P  +        V ++A G  ++
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQA-DGKLPARVEGKLSKSFVEELACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG   D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSI 640



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 10/137 (7%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           +D   PK++  +  V  V  IA G  +   VT  G V+S+G      LGHG   D   P+
Sbjct: 294 IDSLLPKALESVV-VLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 371
            I       I +V  + G+ H  A+  SG +YTWG G    G LGHG ++   +P+ ++ 
Sbjct: 353 LIDALSNLNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG 410

Query: 372 LKSHLAVQGLSVLAEVC 388
                 +QGL + +  C
Sbjct: 411 -----PLQGLHISSISC 422



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G  ++   S+  +F+ G    G LGHG +  + 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  VE
Sbjct: 521 VP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARVE 577

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++   
Sbjct: 578 GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-KQ 636

Query: 271 VVQIAAGPSYMLAV 284
           V  IA G ++  A+
Sbjct: 637 VKSIACGTNFTAAI 650



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAY 593

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAAICL 652

Query: 234 RGHV 237
              V
Sbjct: 653 HKWV 656


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 137/288 (47%), Gaps = 28/288 (9%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I  G     ++S    VF+CG    G LG G      V++  +  P    V       
Sbjct: 3110 IHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLG------VTYN-VPLPHQLPVLHQYVVK 3162

Query: 166  -VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTA 223
             V V +   HA  +   G+VF+ G+      GH   NR    +PR VEAL+    + V  
Sbjct: 3163 KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRQVEALRAKKIRDVAC 3220

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYM 281
            G + +  ++ +G ++T G   +G+LGHGD   +  PK +A L     VVQ+A G   +  
Sbjct: 3221 GSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGR-RVVQVACGSRDAQT 3279

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            LA+T +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +
Sbjct: 3280 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRA 3337

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            G V+TWGKG    LGHG +     P+P+  L+     H+AV  L  LA
Sbjct: 3338 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3385



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 115/250 (46%), Gaps = 7/250 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L  +  VFS G    G LGHG  TT      ++    A  +  V+   +H+A +
Sbjct: 3170 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRQVEALRAKKIRDVACGSSHSAAI 3228

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
               G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G 
Sbjct: 3229 SSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGA 3287

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G G
Sbjct: 3288 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGKG 3346

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              + LGHG      +P+ I   R  G  V+ V+ G  H +A+  SG VY WG    G  G
Sbjct: 3347 DYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3404

Query: 357  HGDEIDKTLP 366
             G+      P
Sbjct: 3405 SGNTFVNKKP 3414



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 122/267 (45%), Gaps = 14/267 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQV 168
             + + +G  H L L +   V++ G    G LGHG      VS+ R       H   V  +
Sbjct: 4313 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----VSYDRPKLVEHLHGMSVADI 4368

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SGQV T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4369 ACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4427

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4428 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4486

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4487 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4544

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLK 373
            WG    G LG G       P  +S+L+
Sbjct: 4545 WGDNDEGQLGDGTVTAIQRPRLVSALQ 4571



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 8/175 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G  ++  +T  G++ T G  
Sbjct: 652 AYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRG 710

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +A L E   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 711 TYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 770

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +G  +  LQP  +++  R    V R+ AG ++ VAL S G VYTWGK  C  LGH
Sbjct: 771 NGNCNGSLQPILVESLPR----VQRIFAGSQYSVALSSEGQVYTWGKATC--LGH 819



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4224 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4282

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4283 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4341

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4342 KLGHGNRVSYDRPKLVEHLHGM-SVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDS 4400

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4401 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4460

Query: 367  EPLSSLKSHLAVQGLSVLAEVC 388
              + SL       GL V+   C
Sbjct: 4461 YKIESLA------GLGVIKVEC 4476



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 15/144 (10%)

Query: 230 FLTIRGH--------------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           F++I GH               ++ G+    +LGHGDT  R  P  IA LE+   V  + 
Sbjct: 631 FISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVF 689

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G +Y   +T  G + ++G G+   LGHG   D   P  +       +  V + +GD H 
Sbjct: 690 CGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHS 749

Query: 336 VALDSSGYVYTWGKGYCGALGHGD 359
           +AL S G V+ WG G  G LG+G+
Sbjct: 750 LALTSEGLVFAWGDGDYGKLGNGN 773



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 15/240 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   + SN + +S G+     LGHG    + V  T+I       V  V     ++A +
Sbjct: 640 GRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVP-TKIAALEQHCVQSVFCGCTYSAVI 698

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
              G + T G  +    GH +++     P LV AL       V   +G   +  LT  G 
Sbjct: 699 TCGGNLLTWGRGTYARLGHGNSDDRCL-PTLVAALAEHTVVDVALGSGDAHSLALTSEGL 757

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G   +G+LG+G+      P  +   E +  V +I AG  Y +A++  G VY++G  
Sbjct: 758 VFAWGDGDYGKLGNGNCNGSLQPILV---ESLPRVQRIFAGSQYSVALSSEGQVYTWGKA 814

Query: 297 SNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +  CLGH      +Q    PR + + + K   +V ++ G  H +AL SSG V+ WG+  C
Sbjct: 815 T--CLGHQLVERSVQGCSVPRLVSSLQHK--RIVDMAVGVAHCLALSSSGEVFGWGRNDC 870



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 115/286 (40%), Gaps = 23/286 (8%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ +    +   +   VVQV+     
Sbjct: 3218 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVAALAGRRVVQVACGSRD 3276

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3277 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALT 3335

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT +G VY+
Sbjct: 3336 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDSGQVYA 3394

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G   +   G G      +P  +       + V RV+ G  H +A         WG    
Sbjct: 3395 WGDNDHGQQGSGNTFVNKKPALVIGL--DDVFVNRVACGSSHSIA---------WGLPNA 3443

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL-AEVCPTIVQEDTR 397
                   E +K  P P  S +  L    L +  AE      + DT+
Sbjct: 3444 TM-----EEEKRGPVPFGSTRDPLGGSSLGIYEAEAVNQTAKPDTK 3484



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 17/168 (10%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4217 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4268

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4269 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4328

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G VY WG+G  G LGHG+ +    P+    L  HL   G+SV    C
Sbjct: 4329 EGEVYAWGEGEDGKLGHGNRVSYDRPK----LVEHL--HGMSVADIAC 4370



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 28/192 (14%)

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
           +  CG   +  P+   R          KQV    N    L+  G +H             
Sbjct: 570 ALSCGEAGSTAPVLSCRFQ-------VKQVVCSENQVLLLSQEGKLHAW----------- 611

Query: 252 DTLDRPTPKSIAPLEEVG--SVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
             L +P  +   PLEE G  + + IA      + +A+  N   YS+G+G +  LGHG+ H
Sbjct: 612 -RLSKPEAEP-QPLEEAGHETFISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTH 669

Query: 308 DELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
               P  I    +   H V+ V  G  +   +   G + TWG+G    LGHG+  D+ LP
Sbjct: 670 ARAVPTKIAALEQ---HCVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLP 726

Query: 367 EPLSSLKSHLAV 378
             +++L  H  V
Sbjct: 727 TLVAALAEHTVV 738



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+  G V++ 
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQEGRVFAC 3131

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  ++   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3132 GEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3191

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L++
Sbjct: 3192 KLGHGNRTTLDKPRQVEALRA 3212


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 129/268 (48%), Gaps = 17/268 (6%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 1883 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 1940

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G  
Sbjct: 1941 FSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLG 1998

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 301
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 1999 EYGRLGHGDNATQLKPKLVAALAGR-RVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKL 2057

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 2058 GRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 2115

Query: 362  DKTLPEPLSSLKS----HLAVQGLSVLA 385
                P+P+  L+     H+AV  L  LA
Sbjct: 2116 HVRKPQPIGGLRGRRVIHVAVGALHCLA 2143



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 116/254 (45%), Gaps = 15/254 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQVSASENH 174
            G++   L  +  VFS G    G LGHG  TT    + V   R     +  +  V+   +H
Sbjct: 1928 GKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLR-----SKKIRDVACGSSH 1982

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLT 232
            +A +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT
Sbjct: 1983 SAAISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALAGRRVIQVACGSRDAQTLALT 2041

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V++
Sbjct: 2042 EDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWT 2100

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    
Sbjct: 2101 WGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 2158

Query: 353  GALGHGDEIDKTLP 366
            G  G G+      P
Sbjct: 2159 GQQGSGNTFVNKKP 2172



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 3067 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 3124

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 3125 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 3184

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 3185 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 3242

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTW KG    LGHG       P+ +++L+
Sbjct: 3243 VYTWSKGDFHRLGHGSVDHVRRPKKVAALQ 3272



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 14/252 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  +
Sbjct: 3066 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADI 3121

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 3122 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDA 3180

Query: 229  GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 3181 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 3239

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++  G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 3240 SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 3297

Query: 347  WGKGYCGALGHG 358
            WG    G LG G
Sbjct: 3298 WGDNDEGQLGDG 3309



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 11/262 (4%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 2977 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 3035

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 3036 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 3094

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 3095 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 3153

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 3154 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 3213

Query: 367  EPLSSLKSHLAVQGLSVLAEVC 388
              + SL       GL V+   C
Sbjct: 3214 YKIESLA------GLGVIKVEC 3229



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 14/189 (7%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 1879 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 1936

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 1937 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 1993

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 1994 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051

Query: 350  GYCGALGHG 358
            G  G LG G
Sbjct: 2052 GDFGKLGRG 2060



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 1889

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LGHG+      P  + +L+S
Sbjct: 1950 KLGHGNRTTLDKPRLVETLRS 1970



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 10/237 (4%)

Query: 106  IVET--SAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            +VET  S     +  G  H+  IS+   +++ G    G LGHG   TQ +    +   + 
Sbjct: 1964 LVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVAALAG 2022

Query: 163  AHVVQVSASENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              V+QV+     A    + + G VF+ GD      G R  +     P  +E L G+   Q
Sbjct: 2023 RRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVIQ 2081

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G  F+  LT  G V T G   + +LGHG       P+ I  L     V+ +A G  +
Sbjct: 2082 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALH 2140

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             LAVT  G VY++G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 2141 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 2195



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 11/147 (7%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 2970 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 3021

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 3022 LFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 3081

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPE 367
             G VY WG+G  G LGHG+ +    P+
Sbjct: 3082 EGEVYAWGEGEDGKLGHGNRMSYDRPK 3108


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 134/272 (49%), Gaps = 13/272 (4%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           T G++   L     V+S GS   G LGHG +T+     T +   +   V+++S    H+A
Sbjct: 24  TDGKHFLALTREGEVYSWGSGDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHSA 82

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--R 234
            V   G+++T G  +    GH  +   +  P LV  L+G     V  G      L     
Sbjct: 83  AVTSEGELYTWGRGNYGRLGHGSSEDQLV-PVLVSGLRGHHIIDVACGSGDAHTLAAADD 141

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LG G +     PKSI  L+ +G V ++  G  + LA+T +G V+++G
Sbjct: 142 GTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLG-VCKVYCGAQFSLALTRDGSVWTWG 200

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  F LGHG +     P+ ++     G HVV VS G  H +AL  +G VY WG+   G 
Sbjct: 201 KGEGFRLGHGTEDHVRHPKLVEAL--DGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQ 258

Query: 355 LGHGDEID-KTLPEPLSSLKSHLAVQGLSVLA 385
           LG   +ID +  PEP  +L S LA +G+  +A
Sbjct: 259 LG---DIDCQIRPEP--TLVSGLASKGIVGIA 285



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 13/280 (4%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--AS 171
            QI  G      +S +  VF+CG S  G LG GP +       +I   S+  V +VS  + 
Sbjct: 2458 QIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSG 2517

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              HA  +   G++F+ G+      GH +       P+L++  K    + ++ G + +  +
Sbjct: 2518 GRHAMALTIEGKLFSWGEGEDGKLGHGNRMN-CDHPKLIDTFKSSCVRDMSCGSSHSAAI 2576

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGV 289
               G ++T G   +G+LGHGD      PK +        V+ IA G   +  LA+T +G 
Sbjct: 2577 LSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTS-HRVIDIACGSRDAQTLALTDDGT 2635

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+S+G G    LG G       P  ++  + +G  V +V+ G +  +AL +SG V+TWGK
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQG--VCKVACGAQFSLALSTSGLVWTWGK 2693

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSH----LAVQGLSVLA 385
            G    LGHG++     P+ +  L+      +AV  L  LA
Sbjct: 2694 GDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLA 2733



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 12/267 (4%)

Query: 94   LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
            ++ L+S++H   +V   A +   + G++   L ++  V+S G    G LGHG   + C  
Sbjct: 3430 IKMLESLQHV--VVRKVAVH---SGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDR 3483

Query: 154  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
               I       V+ +S   +H+A + Q+ +++T G       GH D+   +  P++VEAL
Sbjct: 3484 PRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLL-PKVVEAL 3542

Query: 214  KGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            +G     V   +G   T  LT    V + G   +G+LG G +     P  +  L  +G V
Sbjct: 3543 RGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLG-V 3601

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
             ++  G  + +A+T +G VY++G G  + LGHG      +P+ +     +G  V+ ++ G
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAAL--QGKKVITIATG 3659

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHG 358
              H VA   +G VYTWG    G LG G
Sbjct: 3660 SLHCVASTDTGEVYTWGDNDEGQLGDG 3686



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 3/218 (1%)

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
             F  A  V Q++        V   G+VF CG++++   G    +  +  PR +E L    
Sbjct: 2449 EFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFM 2508

Query: 218  CKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             ++V+  +G      LTI G + + G    G+LGHG+ ++   PK I   +    V  ++
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKS-SCVRDMS 2567

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G S+  A+  +G +Y++G G    LGHG+ +  L+P+ +Q+F    +  +   + D   
Sbjct: 2568 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 2627

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +AL   G V++WG G  G LG G     ++P P+  L+
Sbjct: 2628 LALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQ 2665



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V +   HA  +   G V++ G+      GH + N    RPR++EAL+G     ++ G 
Sbjct: 3444 VAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDRPRVIEALRGKGVIDISCGG 3502

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
            + +  +T    ++T G   +G+LGHGD+ D+  PK +  L     V+ +A  +G +  L 
Sbjct: 3503 SHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRG-NRVIDVACGSGDAQTLC 3561

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  +++    G+ V +V  G +  VAL  SG 
Sbjct: 3562 LTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESL--IGLGVSKVECGSQFSVALTRSGA 3619

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
            VYTWGKG    LGHG  +D  +  P    K   A+QG  V+
Sbjct: 3620 VYTWGKGDYYRLGHG--VDDHVRRP----KRVAALQGKKVI 3654



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 85/169 (50%), Gaps = 12/169 (7%)

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           T G +F   LT  G V++ GS   G+LGHGDT  R  P  +  L     V++I+ G ++ 
Sbjct: 24  TDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAG-KQVIRISCGSTHS 81

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALD 339
            AVT  G +Y++G G+   LGHG   D+L P  +   R  G H++ V+  +GD H +A  
Sbjct: 82  AAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLR--GHHIIDVACGSGDAHTLAAA 139

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G V++WG G  G LG G       P+ +  L      QGL V    C
Sbjct: 140 DDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERL------QGLGVCKVYC 182



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 7/203 (3%)

Query: 180  QSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            Q GQ  VF  G N     G    ++ I  P L E +  +  +Q+  G      ++  G V
Sbjct: 2417 QEGQIKVFVWGLNDKDQLGGLKGSK-IKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKV 2475

Query: 238  HTCGSNTHGQLGHGD-TLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
              CG +T+G+LG G  + +   P+ I  L   +   V + +G  + +A+T  G ++S+G 
Sbjct: 2476 FACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGE 2535

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G +  LGHG + +   P+ I TF+   +    +S G  H  A+ SSG +YTWG G  G L
Sbjct: 2536 GEDGKLGHGNRMNCDHPKLIDTFKSSCVR--DMSCGSSHSAAILSSGELYTWGLGEYGRL 2593

Query: 356  GHGDEIDKTLPEPLSSLKSHLAV 378
            GHGD      P+ + S  SH  +
Sbjct: 2594 GHGDNYTHLKPKKVQSFTSHRVI 2616



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 10/202 (4%)

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG ++  G N     G  +  + +  P+ +EAL  +   Q+  G      +T  G V+  
Sbjct: 3353 SGTIYGWGHNHRGQLGSLEGAK-VKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYAT 3411

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV----QIAAGPSYMLAVTGNGVVYSFGSG 296
            G    G+LG G T    T  SI  LE +  VV     + +G  + +A++ +G VYS+G G
Sbjct: 3412 GYGHGGRLGLGGT---DTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEG 3468

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             +  LGHG ++   +PR I+  R KG  V+ +S G  H   +  +  +YTWGKG  G LG
Sbjct: 3469 DDGKLGHGNRNSCDRPRVIEALRGKG--VIDISCGGSHSACITQNHELYTWGKGRYGRLG 3526

Query: 357  HGDEIDKTLPEPLSSLKSHLAV 378
            HGD  D+ LP+ + +L+ +  +
Sbjct: 3527 HGDSEDQLLPKVVEALRGNRVI 3548



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 3/167 (1%)

Query: 208  RLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            +++E+L+ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  L
Sbjct: 3431 KMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEAL 3490

Query: 266  EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
               G V+ I+ G S+   +T N  +Y++G G    LGHG+  D+L P+ ++  R   +  
Sbjct: 3491 RGKG-VIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVID 3549

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 3550 VACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESL 3596



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G  HTL  ++  +V+S G    G LG G  +  C +   I       V +V      + 
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRG-GSDGCKNPKSIERLQGLGVCKVYCGAQFSL 188

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + G V+T G    F  GH  T   +  P+LVEAL G     V+ G      LT  G 
Sbjct: 189 ALTRDGSVWTWGKGEGFRLGH-GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  G N  GQLG  D   RP P  ++ L   G +V IA GP+   A +  G  +S G+ 
Sbjct: 248 VYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKG-IVGIACGPAQSFAWSCAG-QWSVGTR 305

Query: 297 SNFCL 301
             FC+
Sbjct: 306 LQFCV 310



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)

Query: 106  IVETSAGNMQIT----TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
            +VE   GN  I     +G   TL L  +  V+S G    G LG G  +  C    ++   
Sbjct: 3538 VVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG-GSDGCKIPMKVESL 3596

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                V +V      +  + +SG V+T G    +  GH   +  + RP+ V AL+G     
Sbjct: 3597 IGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGH-GVDDHVRRPKRVAALQGKKVIT 3655

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G       T  G V+T G N  GQLG G T     P+ +  L+    + ++A G ++
Sbjct: 3656 IATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQG-KKISRVACGSAH 3714

Query: 281  MLA 283
             +A
Sbjct: 3715 TIA 3717



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L  + +V+S G    G LG G  +  C     +       V +V+     +  +  SG V
Sbjct: 2630 LTDDGTVWSWGDGDFGKLGRG-GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLV 2688

Query: 185  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +T G    +  GH  DT+  + +P++V+ L+G     V  G      +T  G V   G N
Sbjct: 2689 WTWGKGDYYRLGHGNDTH--VRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDN 2746

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             HGQ G+  T     P+ +  LE    + ++A G S+ +A
Sbjct: 2747 DHGQQGNNTTTVNRRPQLVNGLEG-QKITRVACGSSHSIA 2785


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 14/246 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  GRYH+L L  + +V++ G++  G LG+G       S+  +   +   VV ++A E
Sbjct: 250 VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSED---SYDPVQVKNLKDVVAIAAGE 306

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  + + G ++  GDN     G+  + + +  P   ++LK V    + AG   +  L 
Sbjct: 307 NHSLALKKDGTIWAWGDNEWGQLGNSISEK-LCVPVQFKSLKDVVA--IAAGCEHSLALK 363

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G+N +GQLG+G+++D   P  +  L++   VV IA G ++ LA+  +G V++
Sbjct: 364 KDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD---VVAIATGNAHSLALKKDGTVWA 420

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+     LG+G       P  ++  +     VV ++AG +H +A    G V+ WG    
Sbjct: 421 WGNNEFGQLGNGTNKSSFVPVQVKGLK----DVVAIAAGSDHSLAFKKDGTVWAWGNNEF 476

Query: 353 GALGHG 358
           G LG+G
Sbjct: 477 GQLGNG 482



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 118/266 (44%), Gaps = 13/266 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L L  + +V++ G +  G  G     T+  S   +       VV ++A  
Sbjct: 49  IQIAAGNYHSLALKGDGTVWAWGWNHWGQCG-----TEESSIIPVKVKGLKDVVAIAAGR 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G V+  G N     G+RD       P  V+ LK V    + AG  ++  L 
Sbjct: 104 YHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVA--IAAGDGYSLGLK 161

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N   Q+  G   D   P  I  L++   VV IAAG  Y LA+  +G V+ 
Sbjct: 162 KDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKD---VVAIAAGKDYSLALKKDGTVWM 218

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +    N+        DE  P  +Q    K   VV ++AG  H +AL   G V+ WG  Y 
Sbjct: 219 WEYKYNYYEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLALKKDGTVWAWGNNYY 276

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAV 378
           G LG+G   D   P  + +LK  +A+
Sbjct: 277 GQLGNGKSEDSYDPVQVKNLKDVVAI 302



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 156/348 (44%), Gaps = 47/348 (13%)

Query: 48  LYPQKFRSLVDLAASQLCALHS--------IYAGMSRNVQIELLNRCNGNWKRVLRFLQS 99
           + P K + L D+ A      HS        ++A    N   +L NR  G +  V   ++ 
Sbjct: 85  IIPVKVKGLKDVVAIAAGRYHSLTLKKDGTVWA-WGSNKDGQLGNRDAGEYSIVPVQVKG 143

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
           ++   D+V  +AG+       Y   L  + +V+  G +         E+ Q +  +  +F
Sbjct: 144 LK---DVVAIAAGD------GYSLGLKKDGTVWCWGLN---------ESIQVIDGSNKDF 185

Query: 160 ------PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLV 210
                      VV ++A ++++  + + G V+      ++    R   D   P+  P  V
Sbjct: 186 SVPFQIKGLKDVVAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPV--PVQV 243

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           E LK V    + AG   +  L   G V   G+N +GQLG+G + D   P  +  L++V  
Sbjct: 244 EGLKDVVA--IAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDV-- 299

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            V IAAG ++ LA+  +G ++++G      LG+        P   ++ +     VV ++A
Sbjct: 300 -VAIAAGENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLK----DVVAIAA 354

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G EH +AL   G V++WG  Y G LG+G+ ID  +P  +  LK  +A+
Sbjct: 355 GCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKDVVAI 402



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 10/214 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV ++A   H+  + + G V+  G+N     G+  +    + P  V+ LK V    + AG
Sbjct: 249 VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDS-YDPVQVKNLKDVVA--IAAG 305

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  L   G +   G N  GQLG+  +     P     L++V   V IAAG  + LA+
Sbjct: 306 ENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDV---VAIAAGCEHSLAL 362

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+S+G+     LG+G   D   P  ++  +     VV ++ G+ H +AL   G V
Sbjct: 363 KKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK----DVVAIATGNAHSLALKKDGTV 418

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + WG    G LG+G      +P  +  LK  +A+
Sbjct: 419 WAWGNNEFGQLGNGTNKSSFVPVQVKGLKDVVAI 452



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 20/271 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I TG  H+L L  + +V++ G++  G LG+G   T   SF  +       VV ++A  
Sbjct: 400 VAIATGNAHSLALKKDGTVWAWGNNEFGQLGNG---TNKSSFVPVQVKGLKDVVAIAAGS 456

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 230
           +H+    + G V+  G+N     G+       +   P  V+ LK V    V AG   +  
Sbjct: 457 DHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVA--VAAGSVHSLA 514

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 288
           L   G +   GSN HG LG+         +S  P++  G   VV IAAG ++ L +  +G
Sbjct: 515 LKKDGTIWAWGSNYHGLLGN------DIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDG 568

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      L    ++  L   ++    +    VV ++AG+ H + L   G V+ WG
Sbjct: 569 TVWAWGEVWFDLL---NENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWG 625

Query: 349 KGYCGALGHGDEIDKTL-PEPLSSLKSHLAV 378
             + G LG+      +L P  +  LK  LA+
Sbjct: 626 DNFFGQLGNSPREKYSLVPVQVKGLKDILAI 656



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 33/268 (12%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V+   D+V  +AG++       H+L L  + ++++ GS+  G+LG+  E     SF  + 
Sbjct: 496 VKGLKDVVAVAAGSV-------HSLALKKDGTIWAWGSNYHGLLGNDIER----SFVPVQ 544

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGV 216
                 VV ++A  NH+  + + G V+  G+   +     + +R ++   P  ++ LK V
Sbjct: 545 VKGLKDVVAIAAGSNHSLVLKKDGTVWAWGE--VWFDLLNENSRLVYSSVPVQIKGLKDV 602

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPLEEVG--SVVQ 273
               + AG + +  L   G V   G N  GQLG+      P  K S+ P++  G   ++ 
Sbjct: 603 VA--IAAGEHHSLGLKKDGTVWAWGDNFFGQLGN-----SPREKYSLVPVQVKGLKDILA 655

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSA 330
           IA G  + LA+  +G V+++G  S   LG+   G+      P  ++  +     V+ +SA
Sbjct: 656 IATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK----DVLAISA 711

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHG 358
           G  H +AL   G V+ WG    G LG+G
Sbjct: 712 GSYHSLALKKDGTVWGWGANARGQLGNG 739



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 7/110 (6%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +++QIAAG  + LA+ G+G V+++G   N     G +   + P  ++  +     VV ++
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGW--NHWGQCGTEESSIIPVKVKGLK----DVVAIA 100

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAV 378
           AG  H + L   G V+ WG    G LG+ D  + ++ P  +  LK  +A+
Sbjct: 101 AGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVAI 150


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H L L S+  VFS G    G LGHG +   C     I      HVV V+    H
Sbjct: 3711 VNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKAL-CERPKLIESLRDKHVVSVACGGAH 3769

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +A +  SG+++T G       GH D+   + +P+ VE L G     V  G      L + 
Sbjct: 3770 SACITASGELYTWGKGRYGRLGHGDSEDQL-KPKKVEELAGHNVLDVACGSGDAQTLCVS 3828

Query: 235  --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V + G   +G+LG G +     P+ I  L+  G V+++  G  + +A+T  GVVY+
Sbjct: 3829 RDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG-VIKVECGSQFSVALTAAGVVYT 3887

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G    LGHG +    +P+A+Q    +G  V++V+ G  H VA   SG V+TWG    
Sbjct: 3888 WGKGDYHRLGHGSEDHVRRPQAVQG-ALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDE 3946

Query: 353  GALGHGDEIDKTLPEPLSSLK 373
            G LG G       P+ ++SLK
Sbjct: 3947 GQLGDGSTNAIQRPKLVASLK 3967



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 12/272 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 170
            M I  G     ++S +  VF+CG    G LG  H     Q    T ++ P     V V +
Sbjct: 2688 MNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLS-PYFIKKVAVHS 2746

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTG 229
               HA  +   G+VF+ G+      GH   N+  + RP+LVE+LK    + V  G + + 
Sbjct: 2747 GGRHALALTIDGRVFSWGEGEDGKLGH--GNKISYDRPKLVESLKCKRIRDVACGSSHSA 2804

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGN 287
             +T  G ++T GS  +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T  
Sbjct: 2805 AVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSH-ERVVQVACGSRDAQTLALTER 2863

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
              VYS+G G    LG G       P+ ++T   +   V++V  G +  +AL  +G V+TW
Sbjct: 2864 HWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQ--QVIQVECGAQFSLALSKNGKVWTW 2921

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            GKG    LGHG +     P+ +  L     +Q
Sbjct: 2922 GKGDYFRLGHGSDSHVRWPQVVEELADKNVIQ 2953



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 117/246 (47%), Gaps = 13/246 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASENHA 175
            GR+   L  +  VFS G    G LGHG +    +S+ R     +     +  V+   +H+
Sbjct: 2748 GRHALALTIDGRVFSWGEGEDGKLGHGNK----ISYDRPKLVESLKCKRIRDVACGSSHS 2803

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A V  SG+++T G       GH D N P  +P+ V AL      QV  G     T  LT 
Sbjct: 2804 AAVTSSGELYTWGSGEYGRLGHGD-NVPQLKPKQVRALSHERVVQVACGSRDAQTLALTE 2862

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            R  V++ G    G+LG G +     P+++  L     V+Q+  G  + LA++ NG V+++
Sbjct: 2863 RHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNS-QQVIQVECGAQFSLALSKNGKVWTW 2921

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG       P+ ++    K  +V++VS G  H +A+   G VY WG    G
Sbjct: 2922 GKGDYFRLGHGSDSHVRWPQVVEELADK--NVIQVSVGALHCIAVTDRGEVYAWGDNDHG 2979

Query: 354  ALGHGD 359
              G+G+
Sbjct: 2980 QQGNGN 2985



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 15/223 (6%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +  SG VF+ G+      GH  +     RP+L+E+L+      V  G 
Sbjct: 3709 VAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH-GSKALCERPKLIESLRDKHVVSVACGG 3767

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIA--AGPSYM 281
              +  +T  G ++T G   +G+LGHGD+ D+  PK +   EE+   +V+ +A  +G +  
Sbjct: 3768 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKV---EELAGHNVLDVACGSGDAQT 3824

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L V+ +G+V+S+G G    LG G       P+ I + +  G  V++V  G +  VAL ++
Sbjct: 3825 LCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG--VIKVECGSQFSVALTAA 3882

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
            G VYTWGKG    LGHG E     P+ +       A+QG  V+
Sbjct: 3883 GVVYTWGKGDYHRLGHGSEDHVRRPQAVQG-----ALQGKRVI 3920



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 4/198 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P+  E +  +    +  G      ++  G V  CG 
Sbjct: 2653 KVFVWGLNDKDQLGGLKGSK-IKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGE 2711

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             T+G+LG G + +   PK +  L       V + +G  + LA+T +G V+S+G G +  L
Sbjct: 2712 GTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKL 2771

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            GHG +    +P+ +++ + K I    V+ G  H  A+ SSG +YTWG G  G LGHGD +
Sbjct: 2772 GHGNKISYDRPKLVESLKCKRIR--DVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNV 2829

Query: 362  DKTLPEPLSSLKSHLAVQ 379
             +  P+ + +L     VQ
Sbjct: 2830 PQLKPKQVRALSHERVVQ 2847



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 209  LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            + +AL  +   Q+  G      LT  G V+  G    G+LG G T    TP  I  L+ V
Sbjct: 3645 ICDALTALRPVQIVGGEQTLFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHV 3704

Query: 269  GSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              V Q+A  +G  + LA+T +G V+S+G G +  LGHG +    +P+ I++ R K  HVV
Sbjct: 3705 -IVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDK--HVV 3761

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             V+ G  H   + +SG +YTWGKG  G LGHGD  D+  P+ +  L  H
Sbjct: 3762 SVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGH 3810



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 5/237 (2%)

Query: 140  GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
            G LG G E  +  + T  +  +A   VQ+   E     +   G+V+  G  +    G   
Sbjct: 3630 GQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGYGAGGRLGIGG 3688

Query: 200  TNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            T   +  P L+E L+ V   QV   +G      LT  G V + G    G+LGHG      
Sbjct: 3689 TES-VSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCE 3747

Query: 258  TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             PK I  L +   VV +A G ++   +T +G +Y++G G    LGHG+  D+L+P+ ++ 
Sbjct: 3748 RPKLIESLRD-KHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEE 3806

Query: 318  FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
                 +  V   +GD   + +   G V++WG G  G LG G       P+ + SL++
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQN 3863



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 6/225 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF- 177
            G +   + ++  +++ G    G LGHG    Q +   ++   +  +V+ V+     A   
Sbjct: 3767 GAHSACITASGELYTWGKGRYGRLGHGDSEDQ-LKPKKVEELAGHNVLDVACGSGDAQTL 3825

Query: 178  -VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             V + G V++ GD      G   ++   F P+ +++L+     +V  G  F+  LT  G 
Sbjct: 3826 CVSRDGLVWSWGDGDYGKLGRGGSDGCKF-PQKIDSLQNAGVIKVECGSQFSVALTAAGV 3884

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V+T G   + +LGHG       P+++    +   V+Q+A G  + +A T +G V+++G  
Sbjct: 3885 VYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDN 3944

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                LG G  +   +P+ + +   KG  + RV+ G  H V+  +S
Sbjct: 3945 DEGQLGDGSTNAIQRPKLVASL--KGKKMNRVACGSAHTVSWSTS 3987



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 1/139 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G +H  G N  GQLG  +     T      L  +  V QI  G   + A+T +G VY+ G
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPV-QIVGGEQTLFALTSDGKVYATG 3677

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  I+T +   +  V V++G +H +AL SSG V++WG+G  G 
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737

Query: 355  LGHGDEIDKTLPEPLSSLK 373
            LGHG +     P+ + SL+
Sbjct: 3738 LGHGSKALCERPKLIESLR 3756



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            V+S G    G LG G      +    +   ++  V+QV      +  + ++G+V+T G  
Sbjct: 2866 VYSWGDGDFGKLGKGGSDGSSLP-QNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKG 2924

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  ++  +  P++VE L      QV+ G      +T RG V+  G N HGQ G+
Sbjct: 2925 DYFRLGH-GSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGN 2983

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            G+T     P  +  LE   ++  +A G S+ +A +  G
Sbjct: 2984 GNTTVNRKPAIVRGLE---AITNVACGSSHSVAWSSTG 3018


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 134/317 (42%), Gaps = 55/317 (17%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFP 160
           V +  G  ++  G  HTL L+ + SV++CGS+ CG LGH      PE    +   +I   
Sbjct: 29  VFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNSPELVGALDTQKITMV 88

Query: 161 SAAHVVQVSASENHAAFVL----------------------------------------- 179
           S      V+ +E    FV                                          
Sbjct: 89  SCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHC 148

Query: 180 ----QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + GQ+FT G NSS   G          P  V++L G+P  Q+TAG +    L++ G
Sbjct: 149 IALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSG 208

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++FG 
Sbjct: 209 AVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS-QRVVYISCGDEHTAALTKSGGLFTFGD 267

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCGA 354
           GS   LGHG  ++EL PR +      G  V +++ G  H +A + SSG VY +G    G 
Sbjct: 268 GSRGQLGHGSSNNELLPRRVMELM--GTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQ 325

Query: 355 LGHGDEIDKTLPEPLSS 371
           LG G   D   P P+ +
Sbjct: 326 LGTGILADLRSPHPVKN 342



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 10/247 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G++  G LG G E          +  S   + +V+    H  F+LQ G V+TCG NS   
Sbjct: 5   GNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNS--- 61

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGD 252
           CG    ++    P LV AL       V+ G   +  +  +G V   G+   GQLG    +
Sbjct: 62  CGQLGHDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAE 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
           T  R  P+ +  L +  S+ Q+  G  + +A++ +G ++++G  S+  LG G+ +  +L 
Sbjct: 122 TAVR-IPRLLKKLCD-HSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLS 179

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P  +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D+ D+ +P  +  
Sbjct: 180 PSPVKSL--AGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKF 237

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 238 LRSQRVV 244


>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 163/393 (41%), Gaps = 34/393 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL---------TSKTFGGSHGLYPQKFRSLVD 58
           F +   PS ++  +LT+  L   DLA LE          T   F       P    S+ +
Sbjct: 51  FFLASCPS-IVLHVLTTCDLGPRDLAKLEASDAQLSFMATCSFFRKPANFSPDFDLSISE 109

Query: 59  LAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITT 118
           +AA  +C   +I+  M    + E+  RC G+WK VL+FL + E      ++     Q   
Sbjct: 110 VAALDICQKRAIFKCMGEEERQEIKRRCGGSWKLVLKFLLAGEFGCRREKS-----QALA 164

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHA 175
           G  H++ + S   V+S G +  G LG G   ++ Q +    +N      ++Q + S +  
Sbjct: 165 GPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLN---GIRIIQAAISTDRT 221

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  +G+V+  G     C        P    I  P+ V++L  +   Q   G  FT  L
Sbjct: 222 FVISDAGEVYAFG---KVCFSEAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFTAIL 278

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----TGN 287
           +  G V+T       +LGH        P+ +    E   VVQIAAG  Y+LA+    TG 
Sbjct: 279 SREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQPTGM 338

Query: 288 GV--VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            V  V     G            E  PR I+ F    I  V VSAG  H   +   G V 
Sbjct: 339 SVYSVGCGLGGKLGHGLSDSDASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRVC 398

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           TWG G  G LGHG E  +  P+ +  LK   AV
Sbjct: 399 TWGWGRFGCLGHGTEEAENAPKVVDGLKDVKAV 431



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 8/157 (5%)

Query: 207 PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL++   L  +    V+AG      +   G V T G    G LGHG       PK +  
Sbjct: 365 PRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRVCTWGWGRFGCLGHGTEEAENAPKVVDG 424

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L++V   V +A G      V+ +G VYSFGSG           + L P+ + + +     
Sbjct: 425 LKDV-KAVHVATGVYTTFVVSDDGQVYSFGSGGANLGQDDVDENTLTPKLVSSLKDTKER 483

Query: 325 VVRVSA-----GDEHVVALDSSGYVYTWGKGYCGALG 356
           +V VS      G  H  A+  SG +Y +G G  G LG
Sbjct: 484 MVHVSLTNSGNGTGHTFAMTESGTLYAFGAGNRGQLG 520


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 13/245 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 3108 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEVLKSKRIRDIACGSGHS 3163

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 3164 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALIGHRVVQVACGSRDAQTMALTT 3222

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G+V++ G    G+LG G +    TP  +  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 3223 DGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLG-VIQVECGAQFSLALTKYGEVWTW 3281

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 3282 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 3339

Query: 354  ALGHG 358
              G+G
Sbjct: 3340 QQGNG 3344



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 132/278 (47%), Gaps = 17/278 (6%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S   +  V V +   H
Sbjct: 3052 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEP-KAIPFLSQFVIKKVAVHSGGKH 3110

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH +    + +P+L+E LK    + +  G   +  +   
Sbjct: 3111 ALALTQDGKVFSWGEGEDGKLGHGNC-ISLDKPKLIEVLKSKRIRDIACGSGHSAAIASN 3169

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVY 291
            G ++T G   +G+LGHGDT+ +  PK +  L  +G  VVQ+A G   +  +A+T +G VY
Sbjct: 3170 GELYTWGLGEYGRLGHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVY 3227

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            S+G G    LG G       P  +   R   + V++V  G +  +AL   G V+TWGKG 
Sbjct: 3228 SWGDGDFGKLGRGGSDGCYTPLLVD--RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGD 3285

Query: 352  CGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
               LGHG++     P  +  L+     H+AV  L  LA
Sbjct: 3286 YFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 3323



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 15/254 (5%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
            ++  ++S G    G LG G   T  V    +   S  HV    V VS+   H   +   G
Sbjct: 4044 ADGKIYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 183  QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
             V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T G
Sbjct: 4101 HVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG 4158

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 299
               +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4159 KGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4217

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             LG G       P  I +    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG 
Sbjct: 4218 KLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4275

Query: 360  EIDKTLPEPLSSLK 373
            +     P  +++L+
Sbjct: 4276 DDHVRRPRKVAALQ 4289



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++ 
Sbjct: 575 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDT-ISYDEPKLIEALLEKNIIFIACGSTYSA 633

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 287
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 634 ALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 692

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 693 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTW 750

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           GKG    LGHG E     P+ + SL+    V+ LSV
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDR-KVKDLSV 785



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + +++G  H + +S+   V+S G    G LGHG +    VS+
Sbjct: 4072 LLESIQH------VFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSY 4121

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4122 DRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4180

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4181 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4240

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4241 -VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4297

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4298 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 4326



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 19/252 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASENHA 175
           G+++  L  +  V+S G+   G LGHG      +S+       A    +++ ++    ++
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLGHG----DTISYDEPKLIEALLEKNIIFIACGSTYS 632

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
           A +  +G+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T 
Sbjct: 633 AALSANGELYTWGRGNYGRLGHGNFD-DVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++
Sbjct: 692 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVYTW 750

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G  + LGHG +     P+ I++ R +   V  +S G  H++AL    +VY WG+   G
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDR--KVKDLSVGTTHILALTEDQFVYGWGRNDYG 808

Query: 354 ALGHGDEIDKTL 365
                 +ID TL
Sbjct: 809 ------QIDPTL 814



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 4/201 (1%)

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            Q   V+  G N     G    ++ I  P   E L  +    +  G      ++  G ++ 
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYA 3068

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            CG  T+G+LG GD  +   PK+I  L + V   V + +G  + LA+T +G V+S+G G +
Sbjct: 3069 CGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3128

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LGHG      +P+ I+  + K I    ++ G  H  A+ S+G +YTWG G  G LGHG
Sbjct: 3129 GKLGHGNCISLDKPKLIEVLKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHG 3186

Query: 359  DEIDKTLPEPLSSLKSHLAVQ 379
            D I +T P+ + +L  H  VQ
Sbjct: 3187 DTITQTRPKLVQALIGHRVVQ 3207



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 4/214 (1%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     V   G++++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4025 SALRPIQLAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4083

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  +V IA G 
Sbjct: 4084 VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGV-EIVDIACGG 4142

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4143 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4202

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 V++WG G  G LG G      +P  + SL
Sbjct: 4203 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL 4236



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 5/140 (3%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G +YS
Sbjct: 3994 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4051 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDD 4110

Query: 353  GALGHGDEIDKTLPEPLSSL 372
            G LGHG+++    P+ +  L
Sbjct: 4111 GKLGHGNKVSYDRPKLIEDL 4130



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 17/175 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC--GSNT-HGQLGHGDTLDRPTPKSIA 263
           P   +A+  +  KQ+         L++ G+V+    GS T + Q  HG + D+P      
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVYNMYHGSETQYPQRVHGFS-DKP------ 567

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
               +  +   A G  Y LA+T +G VYS+G+G    LGHG+     +P+ I+    K I
Sbjct: 568 ----ITMIASHADGKHY-LALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNI 622

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             + ++ G  +  AL ++G +YTWG+G  G LGHG+  D   P  +++LK H  V
Sbjct: 623 --IFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVV 675



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVS-- 169
            I  G  H+  I SN  +++ G    G LGHG   TQ    TR     A     VVQV+  
Sbjct: 3156 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQ----TRPKLVQALIGHRVVQVACG 3211

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            + +     +   G V++ GD      G R  +   + P LV+ L  +   QV  G  F+ 
Sbjct: 3212 SRDAQTMALTTDGYVYSWGDGDFGKLG-RGGSDGCYTPLLVDRLNNLGVIQVECGAQFSL 3270

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V T G   + +LGHG+      P  +  L     ++ +A G  + LAVT  G 
Sbjct: 3271 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKIIHVAVGALHCLAVTDTGQ 3329

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++G   +   G+G      +P  +     +   V RVS G  H +A
Sbjct: 3330 VYAWGDNDHGQQGNGTTSVNRKPSLVHDL--EDARVNRVSCGSSHSIA 3375



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL +++  +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4194 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVVKVECGSQFSV 4252

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 4253 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4311

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 4312 VFTWGDNDEGQLGDGTTSALHRPRLVHALQG-KKITRVACGSAHTLA 4357


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 129/275 (46%), Gaps = 13/275 (4%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQI------TTGRYHTLLISNSSVFSCGSSLCGVLGHG 145
           RV +   S E  S    ++  +++I      + G +   L S   V+S G+   G LGHG
Sbjct: 454 RVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHG 513

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
            +T  C S   IN      VV V+   +H+A +  SG++FT G  S    G   T   I 
Sbjct: 514 -DTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTED-IL 571

Query: 206 RPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            P LV  L GV    V   +G   T  L   G V++ G   +G+LG G +     PK + 
Sbjct: 572 TPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVD 631

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L+ +  V ++  GP Y  AV  NG V+++G+G  + LGHG +     PR ++T    G 
Sbjct: 632 KLQGL-DVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETL--AGK 688

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           HV  +S G  H +A    G + +WG+   G LG G
Sbjct: 689 HVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEG 723



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 131/270 (48%), Gaps = 20/270 (7%)

Query: 128  NSSVFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
            +  +F+CG +  G LG G      P+  Q  S ++      A    V +   HA  +   
Sbjct: 2965 DGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVA----VHSGGRHAMALTVD 3020

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            G+VF+ G+      GH  +     +PRL+EAL+    + +  G + +  +   G ++T G
Sbjct: 3021 GKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWG 3079

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNF 299
               +G+LGHGD   +  PK +  LE    V+Q+A G   +  LA+T +G VYS+G G   
Sbjct: 3080 LGEYGRLGHGDNTTQLRPKLVKALEG-QRVIQVALGSRDAQTLALTDSGTVYSWGDGDFG 3138

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             LG G       P  I+  R  G+ V ++  G +  +AL  SG V+TWGKG    LGHG 
Sbjct: 3139 KLGRGGSEGCSVPHPIE--RLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT 3196

Query: 360  EIDKTLPEPLSSLK----SHLAVQGLSVLA 385
            +     P+ + +LK    +H+AV  L  L+
Sbjct: 3197 DAHVRKPQLVETLKGKKVTHVAVGALHCLS 3226



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 118/249 (47%), Gaps = 8/249 (3%)

Query: 113  NMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + I +G  H L +S    V+S G    G LGHG   + C     I       VV ++A 
Sbjct: 4025 KVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRAIESLRGKEVVDIAAG 4083

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +  +G++++ G       GH D+     +P+LV+ALKG     V  G      L
Sbjct: 4084 GAHSACITSTGELYSWGKGRYGRLGHGDSEDQT-KPKLVDALKGYRVTDVACGSGDAQTL 4142

Query: 232  TIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I     V + G   +G+LG G +     P  I  L+ +G V+++  G  + +A+T +G 
Sbjct: 4143 CITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLG-VIKVECGSQFSVALTKSGA 4201

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG +    +PR   T   +G  +V ++ G  H VA   +G VYTWG 
Sbjct: 4202 VYTWGKGDYHRLGHGTEDHIRRPRRCTTL--QGKKIVSIACGSLHCVACTDAGEVYTWGD 4259

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 4260 NDEGQLGDG 4268



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 7/241 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRSKRVRDIACGGSHSAAI 3069

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
            + +G ++T G       GH D N    RP+LV+AL+G    QV  G     T  LT  G 
Sbjct: 3070 ISNGDLYTWGLGEYGRLGHGD-NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGT 3128

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P  I  L  VG V QI  G  + LA+T +G V+++G G
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVG-VCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++T   KG  V  V+ G  H +++  +G VY WG    G  G
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETL--KGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG 3245

Query: 357  H 357
            +
Sbjct: 3246 N 3246



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 6/197 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V +++   H   +   G+V++ G+      GH + + P  RPR +E+L+G     + AG 
Sbjct: 4026 VAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRS-PCDRPRAIESLRGKEVVDIAAGG 4084

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G +++ G   +G+LGHGD+ D+  PK +  L+    V  +A  +G +  L 
Sbjct: 4085 AHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGY-RVTDVACGSGDAQTLC 4143

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I     +G+ V++V  G +  VAL  SG 
Sbjct: 4144 ITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDAL--QGLGVIKVECGSQFSVALTKSGA 4201

Query: 344  VYTWGKGYCGALGHGDE 360
            VYTWGKG    LGHG E
Sbjct: 4202 VYTWGKGDYHRLGHGTE 4218



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            S    VQ+         V Q G++F CG+  N     G    N P  +PR + +L     
Sbjct: 2945 STLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVP--QPRQLTSLSQYVI 3002

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     V  IA 
Sbjct: 3003 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRS-KRVRDIAC 3061

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+  NG +Y++G G    LGHG+   +L+P+ ++    +G  V++V+ G  D  
Sbjct: 3062 GGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKAL--EGQRVIQVALGSRDAQ 3119

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL  SG VY+WG G  G LG G     ++P P+  L
Sbjct: 3120 TLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERL 3157



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            QVF  G N     G    ++ I  P + E L  + C Q+  G      +T  G +  CG 
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSK-IKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGE 2973

Query: 243  NTHGQLGHGDTL-DRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G +  + P P+ +  L + V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2974 ATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3033

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  R K   V  ++ G  H  A+ S+G +YTWG G  G LGHGD 
Sbjct: 3034 LGHFSRMNCDKPRLIEALRSK--RVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDN 3091

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ + +L+    +Q
Sbjct: 3092 TTQLRPKLVKALEGQRVIQ 3110



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SGQ++  G N     G  +  + +  P   E L  +   Q+  G      +T  G V   
Sbjct: 3935 SGQIWGWGHNHRGQLGGVEGAK-VKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCAT 3993

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G    G+LG G T    TP  I  ++ V    V I +G  + LA++  G VYS+G G + 
Sbjct: 3994 GYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDG 4053

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             LGHG +    +PRAI++ R  G  VV ++AG  H   + S+G +Y+WGKG  G LGHGD
Sbjct: 4054 KLGHGNRSPCDRPRAIESLR--GKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD 4111

Query: 360  EIDKTLPEPLSSLKSH 375
              D+T P+ + +LK +
Sbjct: 4112 SEDQTKPKLVDALKGY 4127



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 9/184 (4%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P++I  
Sbjct: 4012 PTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIES 4071

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     VV IAAG ++   +T  G +YS+G G    LGHG+  D+ +P+ +   +   + 
Sbjct: 4072 LRG-KEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVT 4130

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
             V   +GD   + +     V++WG G  G LG G      +P  +       A+QGL V+
Sbjct: 4131 DVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKID------ALQGLGVI 4184

Query: 385  AEVC 388
               C
Sbjct: 4185 KVEC 4188



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 22/227 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           ++QV+ S N    +L++G+V+   +++     H   T   I   +L    +G  C  +T+
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTS 495

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                      G V++ G+   G+LGHGDT+   +P  I  L    SVV +A G  +  A
Sbjct: 496 ----------EGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHG-KSVVNVACGSHHSAA 544

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSS 341
           +T +G ++++G GS   LG G   D L P  +      G+ VV V+  +GD   +AL  +
Sbjct: 545 ITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLL--GVTVVDVACGSGDAQTIALADT 602

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G VY+WG G  G LG G       P+ +  L      QGL V    C
Sbjct: 603 GSVYSWGDGEYGKLGRGGSEGCKAPKLVDKL------QGLDVTRVYC 643



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 10/228 (4%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA-- 176
            G +   +ISN  +++ G    G LGHG  TTQ +    +       V+QV+     A   
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQ-LRPKLVKALEGQRVIQVALGSRDAQTL 3121

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             +  SG V++ GD      G R  +     P  +E L GV   Q+  G  F+  LT  G 
Sbjct: 3122 ALTDSGTVYSWGDGDFGKLG-RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQ 3180

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V T G   + +LGHG       P+ +  L+    V  +A G  + L+V  NG VY++G  
Sbjct: 3181 VWTWGKGDYFRLGHGTDAHVRKPQLVETLKG-KKVTHVAVGALHCLSVLDNGQVYAWGDN 3239

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---LDSS 341
             +   G+       +P  +Q    +G  + RV+ G  H +A   LDSS
Sbjct: 3240 DHGQQGNSTTTVNRKPALVQGL--EGCKISRVACGSSHSIAWCTLDSS 3285



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 8/205 (3%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  SV+S G    G LG G  +  C    +I+      V++V      + 
Sbjct: 4136 SGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKVPMKIDALQGLGVIKVECGSQFSV 4194

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T   I RPR    L+G     +  G       T  G 
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGH-GTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGE 4253

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA + N  V +    
Sbjct: 4254 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHSLAWSTNKPVNAGKLP 4312

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRK 321
            +   +    +++ LQ   I   R +
Sbjct: 4313 AQIPM----EYNSLQSLPINVLRNR 4333



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 67/180 (37%), Gaps = 49/180 (27%)

Query: 240 CGSN---THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--------------------- 275
           CG+      G L   D     TP +I    ++  ++Q+A                     
Sbjct: 402 CGAQELFAWGWLSTSDATCHNTPTTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNS 461

Query: 276 AGPSYM-----------------------LAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           A P  M                       LA+T  G VYS+G+G    LGHG+      P
Sbjct: 462 AEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSP 521

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             I      G  VV V+ G  H  A+ +SG ++TWG+G  G LG G   D   P  +S L
Sbjct: 522 MLINELH--GKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGL 579


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 142/296 (47%), Gaps = 10/296 (3%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H+L ++N   V+S GS+  G LG   +TT+ +    I   +A  VVQ++A   
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHY 463

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +  SG+++  G N+    G   TN  +  P LV++L GVP   +  G N +  ++ 
Sbjct: 464 HCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK 523

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  D   R  P  +  L  +G V  ++ G  + + +T  G V++ 
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFLTAGGGVFTC 582

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G+   LGHG  ++E+ PR +  F   G  + +++ G  H +A + S G +Y +G    
Sbjct: 583 GAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGV 640

Query: 353 GALGHGDEIDKTLPE----PLSSLKSHLAVQGLSVLAEVCP-TIVQEDTRSCSDII 403
           G LG G   +   P+    P  S     +VQ    LA + P   V+ D  S  + I
Sbjct: 641 GQLGIGIVGNYNTPQIVRGPWQSQILTFSVQMSEELAAIKPDDTVELDLMSAVETI 696



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 5/221 (2%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           ++++  A  + + +   +H   +   G++++CG+N     GH   + P  RP+L+ AL+ 
Sbjct: 340 KMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALEN 399

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQI 274
               Q   G   +  LT  G V++ GSN  GQLG   DT  +  P+ I  +     VVQI
Sbjct: 400 YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSI-AAKQVVQI 458

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 333
           AAG  + LA+T +G +Y++GS +   LG G  ++++  P  +Q+    G+ +  ++ G  
Sbjct: 459 AAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL--AGVPIAFIACGGN 516

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           H  A+  SG ++ WGK   G LG  D   +  P  L +L+S
Sbjct: 517 HSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRS 557



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 7/257 (2%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTLL++N   ++SCG++  G LGH  E+        +       + Q      H+  
Sbjct: 355 GASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHSLA 414

Query: 178 VLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   GQV++ G N+    G   DT R I  PRL+ ++      Q+ AG      LT  G 
Sbjct: 415 LTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHCLALTNSGE 473

Query: 237 VHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++  GSN +GQLG G T ++  TP  +  L  V  +  IA G ++  AV+ +G ++ +G 
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV-PIAFIACGGNHSFAVSKSGAIFGWGK 532

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            +   LG  + +    P  ++T R  G+    VS GD+  V L + G V+T G G  G L
Sbjct: 533 NTFGQLGLNDLNSRQFPTQLRTLRSLGVRY--VSCGDDFSVFLTAGGGVFTCGAGTFGQL 590

Query: 356 GHGDEIDKTLPEPLSSL 372
           GHG   ++ LP  +  L
Sbjct: 591 GHGSCNNEILPRMVFEL 607



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH L ++NS  +++ GS+  G LG G    +  + T +   +   +  ++   
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGG 515

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D N   F P  +  L+ +  + V+ G +F+ FLT
Sbjct: 516 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQF-PTQLRTLRSLGVRYVSCGDDFSVFLT 574

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 575 AGGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKI 632

Query: 291 YSFG 294
           Y FG
Sbjct: 633 YGFG 636



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 5/157 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSI 262
           +  PR ++ +      +   G + T  LT  G +++CG+N HGQLGH  ++L    P+ +
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLL 394

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRK 321
             LE    + Q   G ++ LA+T  G VYS+GS +   LG   +   ++ PR I++   K
Sbjct: 395 TALENY-IITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              VV+++AG  H +AL +SG +Y WG    G LG G
Sbjct: 454 --QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLG 488


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +T   +   RI+      ++ +S  +  H       G+V+ 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V+ G + T  LT  G V+  G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG  Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI++++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVP 276

Query: 367 EPLSSLKSHL 376
             ++  K  +
Sbjct: 277 TLINMDKERM 286



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 14/238 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPE----TTQCVSFTRINFPSAAHVVQVSASEN 173
           TG +  +  ++  V++ G +    LG+G      T   VS   I       V +VS   +
Sbjct: 83  TGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLI----GKRVTEVSCGSH 138

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   +   G+V+  G N+S   G   T N+P  R R+   L+      +  G   +  + 
Sbjct: 139 HTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIACGQLCSMAVL 197

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G  +  G N +GQLG G+  ++ TP  IA L+ + +++Q+A G ++ LA+T  G VYS
Sbjct: 198 DNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGI-NIIQVACGYAHTLALTDEGFVYS 256

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGYVYTWGK 349
           +G+ S   LG G + ++  P  I   + + + V   +    H  A  + SG V  WG+
Sbjct: 257 WGANSYGQLGTGNKSNQAVPTLINMDKERMVEV--AACHTSHTSAAKTQSGQVLMWGQ 312



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GDT     P+ I  L  +++ S+     GP  ++A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISL-SYGTGPHVVIA-TAD 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G      LG+G  +  L P  + T    G  V  VS G  H +AL + G VY W
Sbjct: 94  GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLIGKRVTEVSCGSHHTIALTTDGEVYAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS 371
           G    G +G G   ++  P  +SS
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSS 176


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 15/264 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 188
            +++CG    G LG G ++  C     I F S   +  + V +   HA  + Q G++F+ G
Sbjct: 3313 LYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWG 3371

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3372 EGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3430

Query: 249  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3431 GHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3488

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE---ID 362
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3489 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3546

Query: 363  KTLPEPLSSLK-SHLAVQGLSVLA 385
             TL E L   K  H+AV  L  LA
Sbjct: 3547 PTLVEGLRGKKVVHVAVGALHCLA 3570



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 14/260 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             M + +G  H L L  +  +FS G    G LGHG      VS  +   I    +  +  +
Sbjct: 3348 KMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDI 3403

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF- 227
            +    H+A +  SG+++T G       GH DT   + +P+LV++L G    QV  G    
Sbjct: 3404 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDA 3462

Query: 228  -TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             T  LT  G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T 
Sbjct: 3463 QTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTK 3521

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
             G V+++G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY 
Sbjct: 3522 YGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYA 3579

Query: 347  WGKGYCGALGHGDEIDKTLP 366
            WG    G  G+G  I    P
Sbjct: 3580 WGDNDHGQQGNGSTIVNKKP 3599



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 130/265 (49%), Gaps = 17/265 (6%)

Query: 118  TGRYHTLL--ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TLL   ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 4331 TGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 4387

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + +  
Sbjct: 4388 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4445

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT + 
Sbjct: 4446 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVTDDD 4504

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YTWG
Sbjct: 4505 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIYTWG 4562

Query: 349  KGYCGALGHGDEIDKTLPEPLSSLK 373
            KG    LGHG +     P  +++L+
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQ 4587



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 12/231 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4323 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4381

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4382 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4439

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4440 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4499

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            +     V++WG G  G LG G      +P  + SL       GL V+   C
Sbjct: 4500 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLA------GLGVIKVEC 4544



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      + +
Sbjct: 4370 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LMY 4419

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+LVE
Sbjct: 4420 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVE 4478

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4479 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4538

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4539 -VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4595

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4596 TGSLHCVACTDKGEVFTWGDNDEGQLGDG 4624



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 4316 PVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQ 4375

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 4376 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELL--GTEI 4433

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++ G  H  A+ S+G++YTWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 4434 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI 4486



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 563

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 227
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 564 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVHVACGSGDSQ 622

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 681

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G G  + LGHG +     P+ I+    K   V  +  G+ HV+AL     VY W
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTK--KVKELCVGNFHVLALTEDQLVYGW 739

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G+   G +     +   +PEP
Sbjct: 740 GRNDYGQIDPA--LGTVVPEP 758



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 3/177 (1%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3280 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3339

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + +   + + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3340 FLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3399

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +Q
Sbjct: 3400 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQ 3454



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 14/214 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3278 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3336

Query: 209  LVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            L+  L     K+  V +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3337 LIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3396

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3397 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3453

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHG 358
            +V+ G  D   +AL + G VY+WG G  G LG G
Sbjct: 3454 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3487



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 12/219 (5%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   + Q   V++ G+      GH D  R  +  P+LVEAL       +  G  ++  L+
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGD--RVWYDEPKLVEALVDKNITFIACGSTYSAVLS 573

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 290
             G ++T G   +G+LGHG++ +   P  +  L     VV +A  +G S  L VT +G+V
Sbjct: 574 SNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNG-HMVVHVACGSGDSQTLCVTASGIV 632

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G+   LG G       P+ +       I+V +V  G +   AL + G VYTWGKG
Sbjct: 633 FSWGDGNYGKLGRGGCDGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKG 690

Query: 351 YCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
               LGHG+E     P+ +  L +     L V    VLA
Sbjct: 691 EGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLA 729



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 7/141 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4347

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4407

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LGHG+ +    P+ +  L
Sbjct: 4408 DGKLGHGNRLMYDRPKLIEEL 4428



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3317

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  + V +G +H +AL   G +++WG+G  G 
Sbjct: 3318 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGK 3377

Query: 355  LGHGDEIDKTLPEPLSSLKS 374
            LGHG+ +    P  + SLKS
Sbjct: 3378 LGHGNSVSLDKPRLIESLKS 3397



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 2/100 (2%)

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ LA+T +  VYS+G+G    LGHG++    +P+ ++    K I  +  + G  +   L
Sbjct: 515 THYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFI--ACGSTYSAVL 572

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            S+G +YTWG+G  G LGHG+  +  +P  +++L  H+ V
Sbjct: 573 SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVV 612



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   +       V+ V+   
Sbjct: 4434 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLVEALQDYKVIDVACGS 4492

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4493 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVA 4551

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4552 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4610

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4611 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4655



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++ SV+S G    G LG G  +  C +   I+  +   VVQ+      +  + + G+V
Sbjct: 3467 LTADGSVYSWGDGDFGKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3525

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + +P LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3526 WTWGKGDYFRLGHGNDHH-VRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDND 3584

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G+G T+    P  +  L++   V +++ G S+ +A
Sbjct: 3585 HGQQGNGSTIVNKKPSLVHELDD-ARVNRVSCGSSHSIA 3622



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+++GN  +  +GS + +            P+ +  F  K + ++   +   H +AL  
Sbjct: 475 ILSISGNVYMMYYGSETQY------------PQRVYGFSEKPVTMIASHSDGTHYLALTQ 522

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              VY+WG G  G LGHGD +    P+ + +L
Sbjct: 523 DSSVYSWGNGDGGRLGHGDRVWYDEPKLVEAL 554


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 19/226 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T  G ++T G  TH  G LGHG+++   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                      SG ++TWG G    LGHGD+  K +P  +++L  H
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 132/291 (45%), Gaps = 24/291 (8%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   ++  +Q +  G YH+  ++ S     +  G+   G+LGHG   +      
Sbjct: 163 VAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTP-K 221

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+  P     V  V+    H   V  +GQ+F+ GD +    GH D  +    PR VE+LK
Sbjct: 222 RVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLK 280

Query: 215 GVPCKQVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G   T  +            ++ G + T G     +LGHGD   +  P  +
Sbjct: 281 GLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCV 340

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L +  +  Q+A G S  +A+T  G +Y+ GS S   LG  +    L P  ++  R   
Sbjct: 341 AALVD-HNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR--- 395

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +  VS G  HV AL S G V TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 396 TLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALR 446



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 12/187 (6%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F PR V +L  +  +Q+  G+  T  +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 321
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGG-PLE 228

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK      GL
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLK------GL 282

Query: 382 SVLAEVC 388
             L   C
Sbjct: 283 KTLRAAC 289



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 22/252 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT+L+ S   +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 280
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 341 SGYVYTWGKGYC 352
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G       +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 121/259 (46%), Gaps = 5/259 (1%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 352 CGALGHGDEIDKTLPEPLS 370
            G LG G   +   P P+ 
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG     D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 109/232 (46%), Gaps = 10/232 (4%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           +G G E    VS   +       V QV     HAA +   G++FT G       GH +  
Sbjct: 250 VGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGN-R 308

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  PR +EAL+G+PC QV  G  +T  +T  G ++T G+  +G+LG GD  DR TP  
Sbjct: 309 EGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSR 368

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L     V ++ AG  +   +T  G VY+F  G +   GHG+  D L PR I TF   
Sbjct: 369 VEGLHS--KVKEVYAGSVHSCVLTREGTVYAF--GKHEYTGHGDHEDVLDPRLIPTFSGG 424

Query: 322 GIHVVR---VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
              +VR   V  G  H +AL   G VY WG      LG G+    T+P  + 
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSF--TVPRNME 474



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 22/199 (11%)

Query: 161 SAAHVVQVSASEN--HAAFVLQSGQVFTCGDN--------SSFCCGHRDTNRPIF--RPR 208
           S A V Q+S      H   +   GQV+  G N        +SF    R+     F   P+
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTV-PRNMEGAYFLPSPQ 483

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-- 266
           LVE+L G+   +V AG   +  LT+ G ++ CG N  GQLG G     P  +   P +  
Sbjct: 484 LVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQAD 543

Query: 267 -------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
                  +   + QIA G  + +AV  NG V+SFG+G    LGH     E  PR +Q  +
Sbjct: 544 FCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALK 603

Query: 320 RKGIHVVRVSAGDEHVVAL 338
                ++ V+ G+   + L
Sbjct: 604 STRREIMHVACGNNCTLVL 622



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCK 219
           + V +V A   H+  + + G V+  G +     GH D +  +  PRL+    G      +
Sbjct: 374 SKVKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGD-HEDVLDPRLIPTFSGGSGALVR 430

Query: 220 QVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGD--TLDR--------PTPKSIAPLEE 267
           Q++ G     T  LT +G V+  G N   QLG G+  T+ R        P+P+ +  L  
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESL-- 488

Query: 268 VG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-------- 318
           VG ++V++ AG  +  A+T +G +Y  G      LG G      Q      F        
Sbjct: 489 VGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLID 548

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           R + + + +++ G EH VA+  +G V+++G G  G LGH     +  P  + +LKS
Sbjct: 549 RLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKS 604



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           SV Q+  G  +   +T  G ++++G G    LGHG +     PR I+    +GI  V+V+
Sbjct: 272 SVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEAL--EGIPCVQVA 329

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            G  +  A+ +SG +YTWG G  G LG GD  D+  P  +  L S +
Sbjct: 330 CGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKV 376



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 27/202 (13%)

Query: 113 NMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PS--------A 162
            + +  G YHT+ ++    V++ G +    LG G   T   +     F PS         
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVG 490

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR------------LV 210
            ++V+V A   H+A +   GQ++ CG N     G      P   P+            L+
Sbjct: 491 MNIVKVVAGWGHSAALTVDGQLYVCGRNYQ---GQLGLGSPQGFPQNERGHPFQADFCLI 547

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-G 269
           + L+ +  KQ+  G   +  +   G V + G+   GQLGH  T     P+ +  L+    
Sbjct: 548 DRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRR 607

Query: 270 SVVQIAAGPSYMLAVTGNGVVY 291
            ++ +A G +  L + G GV +
Sbjct: 608 EIMHVACGNNCTLVLAG-GVAF 628



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + + V  +G  +  G G       GE   ++ P  +Q     G+ V +V  G +H   L 
Sbjct: 237 FAMGVVDDGPHHEVGEG-------GEGWSDVSPVVVQGL--LGLSVQQVCCGGQHAAVLT 287

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G ++TWG+G  G LGHG+      P  + +L+    VQ
Sbjct: 288 DCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQ 327


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 13/245 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 2685 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEILKSKRIRDIACGSGHS 2740

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 2741 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALVGQRVVQVACGSRDAQTMALTT 2799

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP ++  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 2800 DGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLG-VIQVECGAQFSLALTKYGEVWTW 2858

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 2859 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 2916

Query: 354  ALGHG 358
              G+G
Sbjct: 2917 QQGNG 2921



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 17/278 (6%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S   +  V V +   H
Sbjct: 2629 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC-EPKAIPFLSQFVIKKVAVHSGGKH 2687

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH +    + +P+L+E LK    + +  G   +  +   
Sbjct: 2688 ALALTQDGKVFSWGEGEDGKLGHGNC-ISLDKPKLIEILKSKRIRDIACGSGHSAAIASN 2746

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVY 291
            G ++T G   +G+LGHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VY
Sbjct: 2747 GELYTWGLGEYGRLGHGDTITQTRPKLVQAL--VGQRVVQVACGSRDAQTMALTTDGCVY 2804

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            S+G G    LG G       P A+   R  G+ V++V  G +  +AL   G V+TWGKG 
Sbjct: 2805 SWGDGDFGKLGRGGSDGCYTPLAVD--RLNGLGVIQVECGAQFSLALTKYGEVWTWGKGD 2862

Query: 352  CGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
               LGHG++     P  +  L+     H+AV  L  LA
Sbjct: 2863 YFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 2900



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 13/249 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG +T        I      ++V ++    ++A +
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLGHG-DTVSYDEPKLIESLLDKNIVFIACGSTYSAAL 214

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             SG+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T  G 
Sbjct: 215 SASGELYTWGRGNYGRLGHGNFDD-VLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGI 273

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++G G
Sbjct: 274 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGGQFSAALTAHGEVYTWGKG 332

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             + LGHG +     P+ I++ R K I    +S G  H++AL    +VY WG+   G   
Sbjct: 333 DAYRLGHGSEEHVRYPKVIESLRDKKIK--DLSVGTTHILALTEDQFVYGWGRNDYG--- 387

Query: 357 HGDEIDKTL 365
              +ID TL
Sbjct: 388 ---QIDPTL 393



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   + Q G V++ G+      GH DT      P+L+E+L       +  G  ++ 
Sbjct: 154 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIESLLDKNIVFIACGSTYSA 212

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 287
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 213 ALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 271

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 272 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGGQFSAALTAHGEVYTW 329

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           GKG    LGHG E     P+ + SL+    ++ LSV
Sbjct: 330 GKGDAYRLGHGSEEHVRYPKVIESLRDK-KIKDLSV 364



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 7/234 (2%)

Query: 147  ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
            + T  VSF   ++      V +  S +      Q   V+  G N     G    ++ I  
Sbjct: 2557 QLTTSVSFLASDWEVLQEQVAIQRSTDTPP---QQSAVYVWGLNDKDQLGGLKGSK-IKL 2612

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK+I  L 
Sbjct: 2613 PIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLS 2672

Query: 267  E-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            + V   V + +G  + LA+T +G V+S+G G +  LGHG      +P+ I+  + K I  
Sbjct: 2673 QFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIR- 2731

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              ++ G  H  A+ S+G +YTWG G  G LGHGD I +T P+ + +L     VQ
Sbjct: 2732 -DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQ 2784



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 14/214 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2608 SKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 2666

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 2667 AIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILK 2726

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +Q     G  VV
Sbjct: 2727 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQAL--VGQRVV 2783

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHG 358
            +V+ G  D   +AL + G VY+WG G  G LG G
Sbjct: 2784 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG 2817



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVS-- 169
            I  G  H+  I SN  +++ G    G LGHG   TQ    TR     A     VVQV+  
Sbjct: 2733 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQ----TRPKLVQALVGQRVVQVACG 2788

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            + +     +   G V++ GD      G R  +   + P  V+ L G+   QV  G  F+ 
Sbjct: 2789 SRDAQTMALTTDGCVYSWGDGDFGKLG-RGGSDGCYTPLAVDRLNGLGVIQVECGAQFSL 2847

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V T G   + +LGHG+      P  +  L     ++ +A G  + LAVT  G 
Sbjct: 2848 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKIIHVAVGALHCLAVTDTGQ 2906

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++G   +   G+G      +P  +     +   V RVS G  H +A
Sbjct: 2907 VYAWGDNDHGQQGNGATSVNRKPSLVHDL--EDARVNRVSCGSSHSIA 2952



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G VYS
Sbjct: 3570 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3626

Query: 293  FG 294
             G
Sbjct: 3627 TG 3628


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT 222
            V+ +SA  +H+  +L    V + G       GH D  +RP   P  +  L G+    +T
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT--PTQLSTLDGLDIISIT 76

Query: 223 AGLNF-TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G +  T +   R  V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ 
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSL-KIRQIACGDSHC 135

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT +G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSIKMVAAGAEHTAAVTED 193

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           G +Y WG G  G LG GD  D+ +PE +S
Sbjct: 194 GELYGWGWGRYGNLGLGDRNDRLVPEKVS 222



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 134/265 (50%), Gaps = 17/265 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVS 169
           I+ G  H++ L+S + V S G    G LGHG     P  TQ  +   ++      ++ ++
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLD------IISIT 76

Query: 170 ASENHAAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              +H     +S  +V++ G       GH +++  +F P+ ++AL  +  +Q+  G +  
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHSLKIRQIACGDSHC 135

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +T+ G V + G N +GQLG G T D   P+ I   + V S+  +AAG  +  AVT +G
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SIKMVAAGAEHTAAVTEDG 194

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            +Y +G G    LG G+++D L P  +      G  ++ V+ G  H +++ SSG +YT+G
Sbjct: 195 ELYGWGWGRYGNLGLGDRNDRLVPEKVSLV--NGDKMIMVACGWRHTISVSSSGGLYTYG 252

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLK 373
               G LGHGD  D   P  + +L+
Sbjct: 253 WSKYGQLGHGDFEDHLTPHKVEALR 277



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 4/261 (1%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSIKMVAAGAE 185

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+++  G       G  D N  +  P  V  + G     V  G   T  ++ 
Sbjct: 186 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSLVNGDKMIMVACGWRHTISVSS 244

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D  TP  +  L +   +  I+ G  + +A+T +G +Y +
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRDS-YISMISGGWRHTMALTSDGNLYGW 303

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  ++    +   +V++S G  H +A+     V++WG+G  G
Sbjct: 304 GWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNG 363

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHG+ +D+ LP+ +  L +
Sbjct: 364 QLGHGESMDRNLPKIIEVLSA 384



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++  +   ++ V+    H
Sbjct: 180 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSLVNGDKMIMVACGWRH 238

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEAL+      ++ G   T  LT  
Sbjct: 239 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKVEALRDSYISMISGGWRHTMALTSD 297

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G+++  G N  GQ+G GD +D  +P  +  P E+  S+VQI+ G  + LA+T    V+S+
Sbjct: 298 GNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSW 357

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 358 GRGTNGQLGHGESMDRNLPKIIEVLSADG 386



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ I+AG S+ +A+    +V S+G G +  LGHG+  D   P  + T    G+ ++ ++ 
Sbjct: 20  VILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTL--DGLDIISITC 77

Query: 331 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           G +H  +  +S   VY+WG G  G LGHG+  D   P+P+ +L S
Sbjct: 78  GADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHS 122



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L       GL +
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTL------DGLDI 72

Query: 384 LAEVC 388
           ++  C
Sbjct: 73  ISITC 77


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 28/253 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI  N   F+ G +    LGHG +T  C   T++   +  +V+Q +   NH  F+  
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHG-DTVTCEKPTQVADLADFNVIQAACGRNHTLFLTD 175

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN S  CG  +    I  P  + +  G P  +V  G  F+  L I+G++HT 
Sbjct: 176 TGTVYACGDNKSGQCGVGNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLHTF 234

Query: 241 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 276
           G   +GQLGH                           +++     + P+E V +++  A 
Sbjct: 235 GLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENV-NIIDFAC 293

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      YS+G G    LGH EQ DE+ PR I+ F  +   V+RV  G  + +
Sbjct: 294 GNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGSSYSL 353

Query: 337 ALDSSGYVYTWGK 349
           A+   G +Y +G+
Sbjct: 354 AISDIGSLYLFGQ 366



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S  H+  + ++ + FT G N     GH DT     +P  V  L      Q   G N T F
Sbjct: 114 SAAHSVLIDENWKAFTFGRNQLSQLGHGDT-VTCEKPTQVADLADFNVIQAACGRNHTLF 172

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGV 289
           LT  G V+ CG N  GQ G G+ L  PT  S   +   G  ++++  G  + + +   G 
Sbjct: 173 LTDTGTVYACGDNKSGQCGVGNKL--PTITSPTRISYNGPPIIKVGCGAEFSVILDIKGN 230

Query: 290 VYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRKG----------IHVVR 327
           +++FG      LGH               H E QPR +  +  K           ++++ 
Sbjct: 231 LHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIID 290

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            + G+ H VA+DS    Y+WG G  G LGH ++ D+ +P
Sbjct: 291 FACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVP 329


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 125/252 (49%), Gaps = 7/252 (2%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V++ G    G LG G  +      T ++      +V ++AS+ H AF+   G+V+T G 
Sbjct: 3   AVYALGRGDLGQLGIGDYSDHPTP-TSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS 61

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N +   G R     +  P  V AL       +  G   T  +T  G + + G + +GQLG
Sbjct: 62  NDAGQLGVRGMEEQVV-PIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 250 H--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
              G+ +D   P+ +    ++    ++AAG  + LA+TG+G VYSFG GS+  LGHG   
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDL-HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P  +++    G+ V +++ G+ H  AL   G V+TWG+G  G LGHG   +  LP 
Sbjct: 180 GCSTPSLVKSLW--GLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237

Query: 368 PLSSLKSHLAVQ 379
            + +L  H  +Q
Sbjct: 238 AVKALVDHDVIQ 249



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 4/186 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H  +V+A   H   +  SG V++ GD SS   GH + +     P LV++L G+   Q+  
Sbjct: 142 HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD-GCSTPSLVKSLWGLGVTQIAC 200

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  LT+ G V T G   +GQLGHG T +   P ++  L +   V+QIA G  + LA
Sbjct: 201 GENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDH-DVIQIACGGDHTLA 259

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++S+G G     GHG + D L P+  Q  + +G  +V+VSAG  H V L   G 
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPK--QVHQLEGRVLVQVSAGARHTVVLLDRGE 317

Query: 344 VYTWGK 349
           VY WG 
Sbjct: 318 VYGWGD 323



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 6/268 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I    YHT  +++   V++ GS+  G LG      Q V   R+       V  ++   
Sbjct: 38  VHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPI-RVAALDTHMVTHIACGF 96

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   V ++G + + G +     G    N     +PR+V+  + +   +V AG   T  L
Sbjct: 97  KHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL 156

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G  + G LGHG+     TP  +  L  +G V QIA G ++  A+T +G V+
Sbjct: 157 TGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLG-VTQIACGENHSAALTVDGKVF 215

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G G    LGHG   +   P A++        V++++ G +H +A+ S G +++WG G 
Sbjct: 216 TWGRGKYGQLGHGSTQNIKLPVAVKALVDH--DVIQIACGGDHTLAITSDGRLFSWGHGL 273

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G  GHG + D   P+ +  L+  + VQ
Sbjct: 274 WGQTGHGTKEDVLSPKQVHQLEGRVLVQ 301



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 64/158 (40%), Gaps = 15/158 (9%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------ 164
           G  QI  G  H+  L  +  VF+ G    G LGHG       S   I  P A        
Sbjct: 194 GVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG-------STQNIKLPVAVKALVDHD 246

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++   +H   +   G++F+ G       GH  T   +  P+ V  L+G    QV+AG
Sbjct: 247 VIQIACGGDHTLAITSDGRLFSWGHGLWGQTGH-GTKEDVLSPKQVHQLEGRVLVQVSAG 305

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
              T  L  RG V+  G     QLG  D  D  T   I
Sbjct: 306 ARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDFSTYGHI 343


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 136/264 (51%), Gaps = 9/264 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSA 170
           +I+ G  HTL+++ +  ++SCGS+  G LGH    ++ VS   +   S+     V+Q + 
Sbjct: 41  EISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAG 100

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTG 229
               +  +  +G+VF+ G N     G    ++   R P+L+++L      Q+T G N   
Sbjct: 101 GSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCL 160

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            LT  G + + G N +GQLG G +     TP+ I  L  +  + QIA+G ++   +T + 
Sbjct: 161 ALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI-PIAQIASGGNHSFILTWSR 219

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  S   LG  +++D+  P   ++ R +   V+ +S G++H VAL   G V+++G
Sbjct: 220 AVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQ--KVMYISCGEDHTVALTKEGGVFSFG 277

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGH    ++ LP+ +  L
Sbjct: 278 AGGFGQLGHNSTQNEILPKRVMEL 301



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 10/252 (3%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           VF  G S  G L  G  E T  +S   ++      + ++S  E H   V + G++++CG 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 190 NSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           N     GH   R     I    LV +L  +   Q   G  F+  +T  G V + G N  G
Sbjct: 64  NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKG 123

Query: 247 QLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           QLG G     +   PK +  L  V +VVQI  G ++ LA+T +G ++S+G      LG G
Sbjct: 124 QLGRGKLSKEEERKPKLMKSLA-VCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLG 182

Query: 305 EQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
             H     P+ I   R  GI + ++++G  H   L  S  V+ WGK   G LG  DE DK
Sbjct: 183 SSHSFHDTPQQIVCLR--GIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDK 240

Query: 364 TLPEPLSSLKSH 375
           + P    SL++ 
Sbjct: 241 SHPTLCKSLRNQ 252



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 11/277 (3%)

Query: 103 SSDIVE--TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S D+VE  +S  +MQ+     G   +L+I+ +  VFS G +  G LG G  + +     +
Sbjct: 80  SIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPK 139

Query: 157 INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    A   VVQ++   NH   +   G++F+ G N     G   ++     P+ +  L+G
Sbjct: 140 LMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRG 199

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  Q+ +G N +  LT    V   G N+ GQLG  D  D+  P     L     V+ I+
Sbjct: 200 IPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRN-QKVMYIS 258

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  + +A+T  G V+SFG+G    LGH    +E+ P+ +      G  + +V+ G  H 
Sbjct: 259 CGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELM--GSVISQVACGRRHT 316

Query: 336 VALD-SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           VA   SSG +Y +G G  G LG GD   +  P P+ S
Sbjct: 317 VAFSPSSGKMYAFGSGGSGQLGLGDTSARNSPFPILS 353


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 129/253 (50%), Gaps = 12/253 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F+ G ++ G LG G     C+   T ++  +   +  +S   NH   +LQ GQ+++CG 
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTCGSNTHGQL 248
           N     G +  N+   R   ++A + +    V++ G N    +  +  ++  G N+ GQL
Sbjct: 61  NDYGQTGRQRNNKRFAR---IDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQL 117

Query: 249 GHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G  D   +    TP+ I  L +  +VVQ+A G S+ LAV  +G V+S+GS     LG   
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKF-AVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
               ++P+  Q  +  G ++V+++AG  H +A+ +SG + TWGK   G LG G       
Sbjct: 177 NVSSVEPK--QILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLS 234

Query: 366 PEPLSSLKS-HLA 377
           P  +SSL+S H+A
Sbjct: 235 PTCVSSLRSQHIA 247



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 10/247 (4%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-EN 173
           I+ G  HT LL+ +  ++SCGS+  G  G      +   F RI+   +  +  VS++  N
Sbjct: 39  ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKR---FARIDAFESMRITNVSSNGAN 95

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
           H   +     ++  GDNS    G  D N +  +R PR +++L      QV  G + +  +
Sbjct: 96  HNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAV 155

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + GSN +GQLG    +    PK I  L     +VQIAAG ++ LA+T +G + 
Sbjct: 156 INDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGF-YIVQIAAGGAHSLAITNSGALL 214

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  S   LG G     L P  + + R +  H+   + G++H   L   G V+T+G G 
Sbjct: 215 TWGKNSFGQLGLGTNDGVLSPTCVSSLRSQ--HIAYAACGEDHTAVLTKEGGVFTFGAGS 272

Query: 352 CGALGHG 358
            G LGH 
Sbjct: 273 SGQLGHN 279



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 4/170 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G+ H+L +I++ +VFS GS+  G LG     +  V   +I   S  ++VQ++A  
Sbjct: 143 VQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSS-VEPKQILKLSGFYIVQIAAGG 201

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG + T G NS    G   TN  +  P  V +L+         G + T  LT
Sbjct: 202 AHSLAITNSGALLTWGKNSFGQLG-LGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLT 260

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             G V T G+ + GQLGH       +P+ +  L  +  V QI  G  Y L
Sbjct: 261 KEGGVFTFGAGSSGQLGHNSLSHHCSPQMVVDLMGI-VVTQITCGRFYAL 309


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 9/264 (3%)

Query: 116 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +T G  HT  +SNS+  V+S G    G LGHG  +   +    I       V Q++  ++
Sbjct: 71  VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIP-QPIKALKGLEVKQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G+V   G N +   G   T   +  P  + A +GV  K + AG   T  +T 
Sbjct: 130 HCLAITTDGEVLGWGRNQNGQLGLGHT-EDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYS 292
            G ++  G   +G LG GD  DR  P  +A +   G +++ +A G  + + V  +G +Y+
Sbjct: 189 NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESGNMYT 246

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FG      LGHG+  D L P  +Q  + K I  +  + G  H  ALDS G +Y WG    
Sbjct: 247 FGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAI--TGGWRHTFALDSDGRLYGWGWNKF 304

Query: 353 GALGHGDEIDKTLPEPLSSLKSHL 376
           G +G G+  D++ P+ +  L+  +
Sbjct: 305 GQVGCGNTEDQSSPQLVKGLQDQV 328



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 5/214 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ +SA  +H+  +L    V + G       GH D     F P +V AL       VT 
Sbjct: 15  QVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF-PTIVSALDDCEISSVTC 73

Query: 224 GLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  L+     V++ G    G+LGHG++ D   P+ I  L+ +  V QIA G S+ L
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGL-EVKQIACGDSHCL 132

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V  +G   N  LG G   D L P  +  F  +G+ V  ++AG EH  A+  +G
Sbjct: 133 AITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAF--EGVAVKMLAAGAEHTTAVTENG 190

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            +Y WG G  G LG GD  D+ +P+ ++++   L
Sbjct: 191 KLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL 224



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 9/285 (3%)

Query: 43  GGSHGLY-PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSV- 100
           G S  L+ PQ  ++L  L   Q+    S    ++ + ++    R N N +  L   + V 
Sbjct: 102 GNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGR-NQNGQLGLGHTEDVL 160

Query: 101 -EHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
             H     E  A  M      + T +  N  ++  G    G LG G    + V   ++  
Sbjct: 161 TPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVP-DQVAA 219

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            +   +  V+    H   V +SG ++T G +     GH D    +  P  V+ALK    +
Sbjct: 220 VAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI-PHQVQALKSKKIQ 278

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            +T G   T  L   G ++  G N  GQ+G G+T D+ +P+ +  L++ V +VVQ   G 
Sbjct: 279 AITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQ--CGW 336

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            + LA+T  G VYS+G G++  LGHG+  D   P+ I+     G 
Sbjct: 337 RHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGF 381


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 4/206 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++  + H+  +   GQ+F  G+N+    G R     I  P+ +++L G+P  Q++AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  L++ G V   GSN+ GQLG GDT DR  P  +  L      V I+ G  +   +
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSG-KKTVSISCGGEHTATL 238

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGY 343
           +  G V++FGSG    LGH    DE  PR +      G  V +V+ G  H + L + +  
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVLVALTNR 296

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPL 369
           +Y++G G  G LG+G+++ +++P P+
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ +SN   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT    F P +V++L G     ++ G   T  L+
Sbjct: 181 NHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR-FVPTIVKSLSGKKTVSISCGGEHTATLS 239

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTG-NGVV 290
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G  + L +      +
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL--WGSKVSQVTCGRHHTLVLVALTNRI 297

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVAL 338
           YSFG G    LG+GEQ  +  P  +   T       + ++ AG++H  AL
Sbjct: 298 YSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLE 266
           R ++ L      Q+  G   +  L+  G +   G N HGQLG   +     +P+ +  L 
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G   V
Sbjct: 170 GI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSL--SGKKTV 226

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +S G EH   L   G V+T+G G  G LGH    D+  P  ++ L
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL 272


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 131/274 (47%), Gaps = 23/274 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ S  +++ G      G+LG+G   +  +   R++ P     V+ VS  
Sbjct: 312 IACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLP-KRVSGPLEGVQVLSVSCG 370

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGL---- 225
             H+A    SG+VFT GD +    GH  R+T   +  P+ VEAL G    +V  GL    
Sbjct: 371 SWHSALTTSSGKVFTFGDGTFGALGHGKRET---VGYPKEVEALSGFRTMKVACGLWHSA 427

Query: 226 ------NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                 N      I   ++T G+    QLGHGD   R  P  +  L +  S  Q+A G S
Sbjct: 428 AIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDY-SFHQVACGHS 486

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A++ +G V++ GS SN  LG+  + D  QP  +Q  R  G  V  +S G  HV  L 
Sbjct: 487 MTIALSTSGHVFTMGSSSNGQLGN-PKSDGKQPIPVQD-RLSGELVEEISCGSCHVAVLT 544

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 545 SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALK 578



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + +  G
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYIACG 315

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G   +  G LG+G       PK ++ PLE V  V+ ++ G  + 
Sbjct: 316 EFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGV-QVLSVSCGSWHS 374

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DS 340
              T +G V++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+ +S
Sbjct: 375 ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEAL--SGFRTMKVACGLWHSAAIVES 432

Query: 341 SGYV---------YTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           S +V         YTWG G    LGHGD+  + +P  + SL
Sbjct: 433 SNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSL 473



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 14/228 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAA-- 163
           + ++ G +H+ L ++S  VF+ G    G LGHG       P+  + +S  R    +    
Sbjct: 365 LSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLW 424

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H   +  S NH +  + S +++T G       GH D +  +  P  V++L      QV  
Sbjct: 425 HSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLV-PTCVQSLIDYSFHQVAC 483

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G + T  L+  GHV T GS+++GQLG+  + D   P  +        V +I+ G  ++  
Sbjct: 484 GHSMTIALSTSGHVFTMGSSSNGQLGNPKS-DGKQPIPVQDRLSGELVEEISCGSCHVAV 542

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +T    VY++G G+N  LGHG   D+ +P  ++  + +  HV  ++ G
Sbjct: 543 LTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDR--HVKSIACG 588



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)

Query: 182 GQVFT----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           G+V+T       ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V
Sbjct: 221 GEVWTDVIPAEGSTNYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEV 276

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG- 296
              G    G+LGHG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G G 
Sbjct: 277 FAWGEELGGRLGHGTDADISRPKLVEAL-AVSNVEYIACGEFHTCAVTASGDLYTWGDGY 335

Query: 297 -SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            +   LG+G       P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GAL
Sbjct: 336 YNVGLLGNGAGASHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGAL 394

Query: 356 GHGDEIDKTLPEPLSSL 372
           GHG       P+ + +L
Sbjct: 395 GHGKRETVGYPKEVEAL 411



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V QIA G  ++   T  G V+++G      LGHG   D  +P+ ++     
Sbjct: 248 PLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVS 307

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +    ++ G+ H  A+ +SG +YTWG GY   G LG+G      LP+ +S       ++
Sbjct: 308 NVEY--IACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSG-----PLE 360

Query: 380 GLSVLAEVC 388
           G+ VL+  C
Sbjct: 361 GVQVLSVSC 369



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 18/184 (9%)

Query: 114 MQITTGRYHTLLISNSS-----------VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           M++  G +H+  I  SS           +++ G+     LGHG + ++ V  T +     
Sbjct: 417 MKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVP-TCVQSLID 475

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQ 220
               QV+   +    +  SG VFT G +S+   G+   D  +PI    + + L G   ++
Sbjct: 476 YSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQPI---PVQDRLSGELVEE 532

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++ G      LT R  V+T G   +G+LGHG   D+  P  +  L++   V  IA G ++
Sbjct: 533 ISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDR-HVKSIACGSNF 591

Query: 281 MLAV 284
              +
Sbjct: 592 TTCI 595


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 6/250 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 483 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 542

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 543 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 601

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 602 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 660

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 661 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 718

Query: 369 LSSLKSHLAV 378
           +  L+ H  V
Sbjct: 719 VEGLREHKVV 728



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSA 170
             + +  G  H L +SN   V+S G  + G LGHG  ++  +   RI        +V+V+ 
Sbjct: 1495 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1552

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1553 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1611

Query: 231  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1612 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1669

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1670 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1727

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            VYTWG    G +G G      +P  +++L+ H
Sbjct: 1728 VYTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1759



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 9/219 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 222
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 464 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 521

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 580

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 340
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 581 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 638

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G VY+WG G  G LG G      +P+P+  L     V+
Sbjct: 639 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVK 677



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 13/257 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 188
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1460 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1518

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1519 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1577

Query: 249  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 302
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1578 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1636

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1637 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1694

Query: 363  KTLPEPLSSLKSHLAVQ 379
               P+ + SL+    V+
Sbjct: 1695 VRRPKLIESLRGMKVVE 1711



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 524 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 583 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 294
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 642 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 699 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 756

Query: 355 LGHG 358
            G+G
Sbjct: 757 QGNG 760



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 10/202 (4%)

Query: 181  SGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            SG +F  G N     G  +  +   PI  P L  ALK +   Q+  G      +T  G V
Sbjct: 1405 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLA-ALKPI---QLVGGEQTLFTVTGEGKV 1460

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSG 296
               G    G+LG G       P  I  ++ V  + V + AG  ++LA++  G VYS+G G
Sbjct: 1461 FATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEG 1520

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             +  LGHG +     PR I++ R  G  +V+V+ G  H  A++++G +YTWGKG  G LG
Sbjct: 1521 VDGKLGHGNRSSLDHPRIIESLR--GDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLG 1578

Query: 357  HGDEIDKTLPEPLSSLKSHLAV 378
            H D  D+  P+ +++LK +L V
Sbjct: 1579 HEDSEDQLKPKLVNALKDNLVV 1600



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 7/148 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1461

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1462 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1521

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G LGHG+      P  + SL+  L V+
Sbjct: 1522 DGKLGHGNRSSLDHPRIIESLRGDLIVK 1549



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 15/248 (6%)

Query: 99   SVEHSSDIVETSAGNM--QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT 155
            S++H   I+E+  G++  ++ TG  H+  I+ +  +++ G    G LGH     Q +   
Sbjct: 1532 SLDHPR-IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPK 1589

Query: 156  RINFPSAAHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
             +N      VV V+     A  +        S  V++ GD      G R  +     P +
Sbjct: 1590 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAI 1648

Query: 210  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            ++ L G     V  G  F+  L+  G V+T G   + +LGHG       PK I  L  + 
Sbjct: 1649 IDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM- 1707

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV+++ G  + +A   NG VY++G      +G G       PR +     +G H+  VS
Sbjct: 1708 KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVS 1765

Query: 330  AGDEHVVA 337
             G  H VA
Sbjct: 1766 CGSAHTVA 1773



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 3/159 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  +  V+S G    G LG G     CV    +   S   VV++      +  + + G V
Sbjct: 636 LTQDGLVYSWGDGDFGKLGRGGSDGCCVP-KPVERLSGQDVVKIECGAQFSLALSRCGLV 694

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +T G    F  GH  +++ + RP++VE L+      V  G      +T  G V   G N 
Sbjct: 695 WTWGKGDYFRLGH-GSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 753

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           HGQ G+G T     P  +  LE V  + ++A G S+ +A
Sbjct: 754 HGQQGNGGTTVNRKPMKVQGLEGV-KITKLACGSSHSIA 791


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 18/213 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA+ V + G+VFT G+ S  C GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGCLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 347

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK IA PLE +  +  +A GP +   VT  G +
Sbjct: 348 AGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL-QIAFVACGPWHTALVTSTGQL 406

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSSTSI 464

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SSG ++TWG G    LGHGD+  +  P  +++L
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVAAL 497



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +H+  ++ +     +  G+   G+LGHG + +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 394 PWHTALVTSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +  +  +IA G S 
Sbjct: 453 VEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALID-SNFHKIACGHSL 511

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
              +T +G V++ GS     LG+ +   ++         R+ I    ++ G  HV  L S
Sbjct: 512 TAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIE--EIACGAYHVAVLTS 569

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALK 602



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 160
           +  G +HT L+ S   +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVW 447

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
             A VV+V A+  H++  + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSSTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVAALIDSNFHK 504

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G + T  LT  G V T GS  +GQLG+  + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQS-DGKVPCLVGDKIARESIEEIACGAYH 563

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAI 619


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 6/250 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 484 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 543

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 544 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 602

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 603 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 661

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 662 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 719

Query: 369 LSSLKSHLAV 378
           +  L+ H  V
Sbjct: 720 VEGLREHKVV 729



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSA 170
             + +  G  H L +SN   V+S G  + G LGHG  ++  +   RI        +V+V+ 
Sbjct: 1496 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1553

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1554 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1612

Query: 231  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1613 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1670

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1671 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1728

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            VYTWG    G +G G      +P  +++L+ H
Sbjct: 1729 VYTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1760



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 9/219 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 222
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 465 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 522

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 581

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 340
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 582 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 639

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G VY+WG G  G LG G      +P+P+  L     V+
Sbjct: 640 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVK 678



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 13/257 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 188
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1461 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1519

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1520 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1578

Query: 249  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 302
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1579 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1637

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1638 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1695

Query: 363  KTLPEPLSSLKSHLAVQ 379
               P+ + SL+    V+
Sbjct: 1696 VRRPKLIESLRGMKVVE 1712



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 525 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 583

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 584 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 642

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 294
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 643 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 700 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 757

Query: 355 LGHG 358
            G+G
Sbjct: 758 QGNG 761



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 10/202 (4%)

Query: 181  SGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            SG +F  G N     G  +  +   PI  P L  ALK +   Q+  G      +T  G V
Sbjct: 1406 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLA-ALKPI---QLVGGEQTLFTVTGEGKV 1461

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSG 296
               G    G+LG G       P  I  ++ V  + V + AG  ++LA++  G VYS+G G
Sbjct: 1462 FATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEG 1521

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             +  LGHG +     PR I++ R  G  +V+V+ G  H  A++++G +YTWGKG  G LG
Sbjct: 1522 VDGKLGHGNRSSLDHPRIIESLR--GDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLG 1579

Query: 357  HGDEIDKTLPEPLSSLKSHLAV 378
            H D  D+  P+ +++LK +L V
Sbjct: 1580 HEDSEDQLKPKLVNALKDNLVV 1601



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 7/148 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1462

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1463 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1522

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G LGHG+      P  + SL+  L V+
Sbjct: 1523 DGKLGHGNRSSLDHPRIIESLRGDLIVK 1550



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 15/248 (6%)

Query: 99   SVEHSSDIVETSAGNM--QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT 155
            S++H   I+E+  G++  ++ TG  H+  I+ +  +++ G    G LGH     Q +   
Sbjct: 1533 SLDHPR-IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPK 1590

Query: 156  RINFPSAAHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
             +N      VV V+     A  +        S  V++ GD      G R  +     P +
Sbjct: 1591 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAI 1649

Query: 210  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            ++ L G     V  G  F+  L+  G V+T G   + +LGHG       PK I  L  + 
Sbjct: 1650 IDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM- 1708

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV+++ G  + +A   NG VY++G      +G G       PR +     +G H+  VS
Sbjct: 1709 KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVS 1766

Query: 330  AGDEHVVA 337
             G  H VA
Sbjct: 1767 CGSAHTVA 1774



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 3/159 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  +  V+S G    G LG G     CV    +   S   VV++      +  + + G V
Sbjct: 637 LTQDGLVYSWGDGDFGKLGRGGSDGCCVP-KPVERLSGQDVVKIECGAQFSLALSRCGLV 695

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +T G    F  GH  +++ + RP++VE L+      V  G      +T  G V   G N 
Sbjct: 696 WTWGKGDYFRLGH-GSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 754

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           HGQ G+G T     P  +  LE V  + ++A G S+ +A
Sbjct: 755 HGQQGNGGTTVNRKPMKVQGLEGV-KITKLACGSSHSIA 792


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 113/222 (50%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVVQPRLVEAMASTTVDFVACG 339

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAIIEV 456

Query: 340 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    SSG ++TWG G    LGHGD+  +  P  + SL
Sbjct: 457 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSL 498



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 20/275 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 336 VACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCG 394

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 395 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTIAVACGVWHTAAI 453

Query: 232 -----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L E  +  +IA G S 
Sbjct: 454 IEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIE-DNFHRIACGHSL 512

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L       F   G  V  ++ G  HV  L S
Sbjct: 513 TVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKF--AGESVEEIACGAYHVAVLTS 570

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              V+TWGKG  G LGHGD  D+  P  + +LK  
Sbjct: 571 KNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDR 605



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI S   +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D +  +  P  V +L      ++ 
Sbjct: 449 HTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARL-EPTCVPSLIEDNFHRIA 507

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKFAGESVEEIACGAYHVA 566

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 567 VLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDR--HVKYIACGSNYSSAI 620



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 7/202 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVE 326

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV 378
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P   E LS L++    
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 379 QGLSVLAEVCPTIVQEDTRSCS 400
            G+   A +   IV + + S S
Sbjct: 445 CGVWHTAAIIEVIVTQSSASVS 466


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 15/266 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L S   V+S G+   G LGHG +T  C    ++       V        H   +
Sbjct: 200 GKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCYKGQKV----LVIVYPYHPEGKHYMAL 254

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIR 234
              G+V++ G+      GH DTN     P LV  L G    +    +  G  ++  +T  
Sbjct: 255 TSEGEVYSWGNGDGGRLGHGDTNSR-EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITAD 313

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVYS 292
           G + T G   +G+LGHG + D+ TP  +  L+    V+ I   +G +  LAVT +G V+S
Sbjct: 314 GELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGR-RVIDICCGSGDAQTLAVTDDGTVWS 372

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG G       P+ I   R +G  +VRV  G +  +AL  +G+++TWGKG  
Sbjct: 373 WGDGDYGKLGRGGSDGCKTPKIID--RLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDS 430

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAV 378
             LGHG E     P+ L  L+    V
Sbjct: 431 QRLGHGTEEHIRFPKQLEGLRGKKVV 456



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 17/257 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           G+++  L S   V+S G+   G LGHG       P   + +S  ++      HVV +   
Sbjct: 248 GKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL----GRHVVHIVCG 303

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             ++A +   G++FT G  +    GH  ++     P LV +LKG     +  G      L
Sbjct: 304 STYSAAITADGELFTWGRGNYGRLGH-GSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTL 362

Query: 232 TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V + G   +G+LG G +    TPK I  L+    +V++  G  + LA+T  G 
Sbjct: 363 AVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQ-DIVRVCCGAQFSLALTKTGH 421

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++++G G +  LGHG +     P+ ++  R  G  VV V+ G  H + +   G VY WG+
Sbjct: 422 IWTWGKGDSQRLGHGTEEHIRFPKQLEGLR--GKKVVDVAVGSMHCLVMTEEGEVYGWGR 479

Query: 350 GYCGALGHGDEIDKTLP 366
              G LG      K+ P
Sbjct: 480 NDQGQLGDSSFSTKSDP 496



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 32/224 (14%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA- 223
           V+Q++ +E     + ++G+V+ C   SS   G          P+L+E+L      +V A 
Sbjct: 149 VLQLACAERCLIALTKTGRVYMCF-YSSESQG----------PQLMESLADKEVLKVAAH 197

Query: 224 --GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--- 278
             G ++   LT  G V++ G+   G+LGHGDT           +   G  V +   P   
Sbjct: 198 PEGKHYMA-LTSEGEVYSWGNGDGGRLGHGDT----------NVCYKGQKVLVIVYPYHP 246

Query: 279 --SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--GIHVVRVSAGDEH 334
              + +A+T  G VYS+G+G    LGHG+ +   +P  ++    K  G HVV +  G  +
Sbjct: 247 EGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTY 306

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             A+ + G ++TWG+G  G LGHG   D+  P  + SLK    +
Sbjct: 307 SAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVI 350


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 11/253 (4%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+  +L SN  VFS G    G LGHG + +      +I       +V +S   +H+A +
Sbjct: 3866 GRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETP-RKIEALLGKQIVHISCGSSHSAAI 3924

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-- 236
               G+++T G       GH D +    +P+L+EALK      V  G      L I     
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGD-DCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDC 3983

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G   +G+LG G +     P  I  L  +G +V ++  G  + +A+T NG +Y++G 
Sbjct: 3984 VWSWGDGDYGKLGRGGSDGCKKPLRIESL--IGMAVCKVECGSQFSVALTKNGDLYTWGK 4041

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +PR +     +G  +V V+AG  H VA   +G V+TWG    G L
Sbjct: 4042 GDYYRLGHGTNDHVRRPRKVACL--QGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQL 4099

Query: 356  GHGDEIDKTLPEP 368
            G+G      +PEP
Sbjct: 4100 GNGTL--NPIPEP 4110



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 9/173 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+++L  +  K++ A +    +L +   G V++ GS   G+LGHGD   R  P+ +  
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI--RREPELVKE 559

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     + QIA G +Y  AVT NG +Y++G GS   LGHG   D L P  +      G H
Sbjct: 560 LVN-KKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGL--SGSH 616

Query: 325 VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           VV V+  +GD H +A+D  G V++WG G  G LG G      +P+ + +LK H
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHH 669



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 8/188 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G V++ G       GH D  R    P LV+ L      Q+  G  ++  +T 
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHGDIRR---EPELVKELVNKKITQIACGSTYSAAVTS 580

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA--AGPSYMLAVTGNGVV 290
            G ++T G  ++G+LGHG++ DR  P  +A L   GS VV +A  +G ++ LA+  +G+V
Sbjct: 581 NGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLS--GSHVVDVACGSGDAHTLAIDKDGIV 638

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G       P+ ++T +    ++V V  G +  VAL   G V+TWGK 
Sbjct: 639 WSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKS 698

Query: 351 YCGALGHG 358
               LGHG
Sbjct: 699 DGYRLGHG 706



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 13/220 (5%)

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G+VF+ G+      GH D T+R    P L+EAL+     ++  G + +  +T
Sbjct: 2967 HSLCITREGKVFSWGEGIDGKLGHGDVTSR--LSPTLIEALESKLIVEIACGSSHSAAVT 3024

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVV 290
              G ++T G   +G+LGHGD+     PK +  L++   V+ IA G   +  LA+T N  V
Sbjct: 3025 ADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDY-KVIDIACGSRDAQTLALTDNNCV 3083

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +S+G G    LG G       P+ I      G  V R++ G +  +AL ++G V+TWGKG
Sbjct: 3084 WSWGDGDFGKLGRGGSEGCNIPQKIDAL--CGRDVCRIACGAQFSLALSTTGKVWTWGKG 3141

Query: 351  YCGALGHGDEIDKTLPE----PLSSLK-SHLAVQGLSVLA 385
                LGHG++     P+    PL   + + +AV  L  LA
Sbjct: 3142 DYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLA 3181



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 8/252 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   +     VFS G  + G LGHG  T++ +S T I    +  +V+++   +H+A V
Sbjct: 2965 GRHSLCITREGKVFSWGEGIDGKLGHGDVTSR-LSPTLIEALESKLIVEIACGSSHSAAV 3023

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
               G+++T G       GH D+ + +  P+ V+AL+      +  G     T  LT    
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDS-KTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNC 3082

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G    G+LG G +     P+ I  L   G  V +IA G  + LA++  G V+++G 
Sbjct: 3083 VWSWGDGDFGKLGRGGSEGCNIPQKIDAL--CGRDVCRIACGAQFSLALSTTGKVWTWGK 3140

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG       P+ I+   +K   +  ++ G  H +A+  +G VY+WG    G  
Sbjct: 3141 GDYYRLGHGNDSHYRSPQLIEGPLKKK-RITEIAVGALHCLAVTDTGEVYSWGDNDHGQQ 3199

Query: 356  GHGDEIDKTLPE 367
            G+G+      P+
Sbjct: 3200 GNGNTTVNKRPQ 3211



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 5/247 (2%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
            +S VF  G +  G LG G + ++  S T +   +A   V ++        V   G+V+  
Sbjct: 2868 DSRVFVWGLNDKGQLG-GCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVS 2926

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G  +T   I  P  ++ L     K+VT   G   +  +T  G V + G    
Sbjct: 2927 GEGANGRLGLGNTEN-ISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID 2985

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGHGD   R +P  I  LE    +V+IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2986 GKLGHGDVTSRLSPTLIEALES-KLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD 3044

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P+ ++  +   +  +   + D   +AL  +  V++WG G  G LG G      +
Sbjct: 3045 SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNI 3104

Query: 366  PEPLSSL 372
            P+ + +L
Sbjct: 3105 PQKIDAL 3111



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 5/158 (3%)

Query: 204  IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
            I  P ++E L+ +  ++++  +G      LT    V + G    G+LGHGD L   TP+ 
Sbjct: 3843 IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRK 3902

Query: 262  IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            I  L  +G  +V I+ G S+  A+T  G +Y++G G    LGHG+  D L+P+ ++  + 
Sbjct: 3903 IEAL--LGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKS 3960

Query: 321  KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              +  V   +GD   +A+     V++WG G  G LG G
Sbjct: 3961 YKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG 3998



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 3/123 (2%)

Query: 258  TPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            TP  I PL+ +    + + +G  + + +T N  V+S+G G +  LGHG++     PR I+
Sbjct: 3845 TPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIE 3904

Query: 317  TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
                 G  +V +S G  H  A+ S G +YTWGKG  G LGHGD  D   P+ L +LKS+ 
Sbjct: 3905 ALL--GKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYK 3962

Query: 377  AVQ 379
             + 
Sbjct: 3963 VID 3965



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 6/171 (3%)

Query: 210  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EV 268
            + AL+ V    +  G      +T  G V+  G   +G+LG G+T +   P  +  L    
Sbjct: 2899 IAALRPV---SIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHF 2955

Query: 269  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
               V +  G  + L +T  G V+S+G G +  LGHG+    L P  I+    K I  V +
Sbjct: 2956 VKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLI--VEI 3013

Query: 329  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            + G  H  A+ + G +YTWG G  G LGHGD     +P+ + +L+ +  + 
Sbjct: 3014 ACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVID 3064



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 22/250 (8%)

Query: 107 VETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPS 161
           ++  A N++   G ++  L S+  V+S GS   G LGHG     PE  + +   +I    
Sbjct: 513 IKKIAANVE---GEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKELVNKKI---- 565

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
                Q++    ++A V  +G+++T G  S    GH ++   +  P LV  L G     V
Sbjct: 566 ----TQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLL-PTLVAGLSGSHVVDV 620

Query: 222 TAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP 278
             G      L I   G V + G   +G+LG G +     PK +  L+     +V +  G 
Sbjct: 621 ACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGS 680

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + +A+  +G V+++G    + LGHG       P+ ++       H+V ++ G  H +AL
Sbjct: 681 QFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGL--INYHIVDIAVGPSHCLAL 738

Query: 339 DSSGYVYTWG 348
             +  ++TWG
Sbjct: 739 TDNCQIFTWG 748



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 7/150 (4%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            I   V   G N  GQLG   G  +  PT  K+IA L  V     IA G   +  VT +G 
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVS----IAGGSKTVFIVTYDGK 2922

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY  G G+N  LG G   +   P  + T     +  V V  G  H + +   G V++WG+
Sbjct: 2923 VYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGE 2982

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G  G LGHGD   +  P  + +L+S L V+
Sbjct: 2983 GIDGKLGHGDVTSRLSPTLIEALESKLIVE 3012



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--A 170
            + I+ G  H+  I S   +++ G    G LGHG +   C+    +    +  V+ V+  +
Sbjct: 3912 VHISCGSSHSAAITSKGELYTWGKGRYGRLGHG-DGDDCLKPKLLEALKSYKVIDVACGS 3970

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +     +     V++ GD      G R  +    +P  +E+L G+   +V  G  F+  
Sbjct: 3971 GDAQTLAITDDDCVWSWGDGDYGKLG-RGGSDGCKKPLRIESLIGMAVCKVECGSQFSVA 4029

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    +V +AAG  + +A T  G V
Sbjct: 4030 LTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQG-KQIVTVAAGSLHCVACTDAGEV 4088

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG+G  +   +P  +     + + + RV  G  H  A
Sbjct: 4089 FTWGDNDEGQLGNGTLNPIPEPTLVTVL--ENVKLNRVGCGSAHSFA 4133



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 89/195 (45%), Gaps = 26/195 (13%)

Query: 115 QITTGR-YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--AS 171
           QI  G  Y   + SN  +++ G    G LGHG    + +  T +   S +HVV V+  + 
Sbjct: 567 QIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLP-TLVAGLSGSHVVDVACGSG 625

Query: 172 ENHAAFVLQSGQVFTCGDNS--------SFCCGHRDTNRPIFRPRLVEALK--GVPCKQV 221
           + H   + + G V++ GD          S CC           P++VE LK        V
Sbjct: 626 DAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCK---------VPKVVETLKHHNKYIVNV 676

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSY 280
             G  F+  L   G V T G +   +LGHG TLD    PK +  L     +V IA GPS+
Sbjct: 677 LCGSQFSVALGKDGTVWTWGKSDGYRLGHG-TLDHVRYPKMVEGLINY-HIVDIAVGPSH 734

Query: 281 MLAVTGNGVVYSFGS 295
            LA+T N  ++++GS
Sbjct: 735 CLALTDNCQIFTWGS 749


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 6/213 (2%)

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            V++   H   +   G+V++ G+      GH + + P  RPR++++L+G     + AG   
Sbjct: 4553 VNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRS-PCDRPRVIDSLRGKEVVDIAAGGAH 4611

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVT 285
            +  +T  G ++T G   +G+LGHGD+ D+P PK +  L+    VV +A  +G +  L +T
Sbjct: 4612 SACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSY-RVVDMACGSGDAQTLCIT 4670

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +  V+S+G G    LG G       P  I+T + +G  V++V  G +  VAL  SG VY
Sbjct: 4671 DDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQG--VMKVECGSQFSVALTKSGSVY 4728

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            TWGKG    LGHG +     P  +S+L++   +
Sbjct: 4729 TWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVI 4761



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 128/265 (48%), Gaps = 14/265 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  TT  VS  R     + +V++   V +   H+  +   G+VF+
Sbjct: 3517 KVYACGEATNGRLGLGI-TTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFS 3575

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3576 WGEGDDGKLGHF-SRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYG 3634

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            +LGHGD   +  PK +  L     VVQ+A G   +  LA+T  G VYS+G G    LG G
Sbjct: 3635 RLGHGDNTTQLKPKQVKALAH-ERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG 3693

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P  +   R +   V ++  G +  +AL  SG V+TWGKG    LGHG +    
Sbjct: 3694 GSEGCNVPHEVDRLRDQ--KVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVR 3751

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  LK     H+AV  L  LA
Sbjct: 3752 KPQIVEGLKGKKIVHVAVGALHCLA 3776



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 10/250 (4%)

Query: 113  NMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S    V+S G    G LGHG   + C     I+      VV ++A 
Sbjct: 4550 KLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRVIDSLRGKEVVDIAAG 4608

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+A +  +G+++T G       GH D+ ++P  RP+LVEALK      +  G      
Sbjct: 4609 GAHSACITANGELYTWGKGRYGRLGHGDSEDQP--RPKLVEALKSYRVVDMACGSGDAQT 4666

Query: 231  LTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L I    +V + G   +G+LG G +     P  I  L+  G V+++  G  + +A+T +G
Sbjct: 4667 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQG-VMKVECGSQFSVALTKSG 4725

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             VY++G G    LGHG      +PR +   + K   V+ V+ G  H VA   +G V++WG
Sbjct: 4726 SVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNK--KVIDVACGSLHCVACTDTGEVFSWG 4783

Query: 349  KGYCGALGHG 358
                G LG G
Sbjct: 4784 DNDEGQLGDG 4793



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 7/224 (3%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+VF+ G+      GH D       P L+  L G    ++  G +++  LT
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH-EEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 290
             G V++ G    G+LGHG + D+ TP  +    +   +V +A  +G +  LAVT +G V
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPM-LLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YS+G G    LG G       P+ I+     G  VVRV  G++  +AL  SG VYTWGKG
Sbjct: 747 YSWGDGDYGKLGRGGNDGCKTPKVIEKLM--GQDVVRVYCGNQFSMALTKSGAVYTWGKG 804

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQE 394
               LGHG E     P+ + +L S   V+ +++ +  C  I ++
Sbjct: 805 DNYRLGHGTEDHARHPKQIEALSSK-KVKDIAIGSLHCMAITED 847



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L ++  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3561 GRHSLALTTDGKVFSWGEGDDGKLGHFSRWN-CDKPRLIEALKSKRVRDIACGSSHSAAI 3619

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              +G ++T G       GH D N    +P+ V+AL      QV  G     T  LT  G 
Sbjct: 3620 TSNGDLYTWGLGEYGRLGHGD-NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGK 3678

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P  +  L +   V QI  G  + LA+T +G V+++G G
Sbjct: 3679 VYSWGDGDFGKLGRGGSEGCNVPHEVDRLRD-QKVCQIECGAQFSLALTKSGQVWTWGKG 3737

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++    KG  +V V+ G  H +A+  SG V+ WG    G  G
Sbjct: 3738 DYFRLGHGTDAHVRKPQIVEGL--KGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQG 3795

Query: 357  HG 358
            +G
Sbjct: 3796 NG 3797



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 4/254 (1%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
             ++VF  G +    LG GP+ ++    T  +  SA   VQ+         V Q G+V+ C
Sbjct: 3463 QTNVFCWGLNDKDQLG-GPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYAC 3521

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G   T   +  PR + +L     K+V   +G   +  LT  G V + G    
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGH    +   P+ I  L+    V  IA G S+  A+T NG +Y++G G    LGHG+
Sbjct: 3582 GKLGHFSRWNCDKPRLIEALKS-KRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
               +L+P+ ++    + +  V   + D   +AL   G VY+WG G  G LG G      +
Sbjct: 3641 NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNV 3700

Query: 366  PEPLSSLKSHLAVQ 379
            P  +  L+     Q
Sbjct: 3701 PHEVDRLRDQKVCQ 3714



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 9/242 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L S+  VFS G+   G LGHG +         I   S   V ++    +++  +
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHG-DYQNHEEPALITGLSGKQVAKICCGSSYSVAL 686

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G+V++ G  +    GH  ++     P L++  KG     V  G      L +   G 
Sbjct: 687 TSNGEVYSWGKGNFGRLGH-GSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V++ G   +G+LG G      TPK I  L  +G  VV++  G  + +A+T +G VY++G 
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKL--MGQDVVRVYCGNQFSMALTKSGAVYTWGK 803

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G N+ LGHG +     P+ I+    K   V  ++ G  H +A+   G +Y WG+   G L
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSK--KVKDIAIGSLHCMAITEDGELYGWGRNEQGQL 861

Query: 356 GH 357
           G+
Sbjct: 862 GN 863



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 2/135 (1%)

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G ++ G LT  G V + G+   G+LGHGD  +   P  I  L     V +I  G SY +A
Sbjct: 628 GKHYMG-LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSG-KQVAKICCGSSYSVA 685

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T NG VYS+G G+   LGHG   D+  P  ++ F+   I  V   +GD   +A+  SG 
Sbjct: 686 LTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 344 VYTWGKGYCGALGHG 358
           VY+WG G  G LG G
Sbjct: 746 VYSWGDGDYGKLGRG 760



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 4/210 (1%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
            +Q+   E     V   G+VF  G  +    G   T   +  P  +E+++ V  K+  V +
Sbjct: 4497 IQLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTES-VSHPTQLESIQHVFIKKLAVNS 4555

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G      L+  G V++ G    G+LGHG+      P+ I  L     VV IAAG ++   
Sbjct: 4556 GGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRG-KEVVDIAAGGAHSAC 4614

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T NG +Y++G G    LGHG+  D+ +P+ ++  +   +  +   +GD   + +     
Sbjct: 4615 ITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDN 4674

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V++WG G  G LG G      +P  + +L+
Sbjct: 4675 VWSWGDGDYGKLGRGGSDGCKVPMKIETLQ 4704



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 271 VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           V++IA+ P   + + +T +G V+S+G+G    LGHG+  +  +P  I      G  V ++
Sbjct: 619 VIRIASHPDGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGL--SGKQVAKI 676

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G  + VAL S+G VY+WGKG  G LGHG   D+T P  L   K H  V
Sbjct: 677 CCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIV 726



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 1/144 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G +   G N  GQLG  D      P S   L  V   +Q+  G   + AVT  G V++ G
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALA-VTRPIQLVGGEQTLFAVTAEGKVFATG 4519

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  +++ +   I  + V++G +H +AL + G VY+WG+G  G 
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAV 378
            LGHG+      P  + SL+    V
Sbjct: 4580 LGHGNRSPCDRPRVIDSLRGKEVV 4603



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 4/159 (2%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     V+S G    G LG G  +  C     ++      V Q+      +  + +SGQV
Sbjct: 3673 LTDEGKVYSWGDGDFGKLGRGG-SEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQV 3731

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  T+  + +P++VE LKG     V  G      +T  G V   G N 
Sbjct: 3732 WTWGKGDYFRLGH-GTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDND 3790

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G+G T     P  +  + E   + ++A G S+ +A
Sbjct: 3791 HGQQGNGTTTVNRKPALV--VLEGYKISKVACGSSHSIA 3827



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 7/197 (3%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++S +V+S G    G LG G     C +   I       VV+V      + 
Sbjct: 732 SGDAQTLAVTDSGAVYSWGDGDYGKLGRGG-NDGCKTPKVIEKLMGQDVVRVYCGNQFSM 790

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G   ++  GH  T      P+ +EAL     K +  G      +T  G 
Sbjct: 791 ALTKSGAVYTWGKGDNYRLGH-GTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGE 849

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYSF 293
           ++  G N  GQLG+    +   P  I  +E   +++ +A GP+   A T  G   V    
Sbjct: 850 LYGWGRNEQGQLGNPSISNFTEPTLIGGMEG-KNIIGVACGPTQTFAWTSGGQWIVSSRV 908

Query: 294 GSGSNFCLGHGEQHDEL 310
               + C    EQ DEL
Sbjct: 909 PFIVDVCKSTFEQLDEL 925


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+VF 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV +  G    +AV  NG +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G++VV+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 276

Query: 367 EPLSSLKSHL 376
             +++ K  +
Sbjct: 277 TLINTDKERM 286



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 14/238 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPE----TTQCVSFTRINFPSAAHVVQVSASEN 173
           TG +  +  ++  VF+ G +    LG+G      T   VS   +       V +V+   +
Sbjct: 83  TGPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLL----GKRVTEVACGSH 138

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   +   G+VF  G N+S   G   T N+P  R R+   L+      V  G   +  + 
Sbjct: 139 HTIALTADGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQSKVVVNVGCGQLCSMAVL 197

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++  G N +GQLG G+  ++ TP  IA L+ V +VVQ+A G ++ LA+T  G VY+
Sbjct: 198 DNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NVVQVACGYAHTLALTDEGFVYA 256

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGYVYTWGK 349
           +G+ S   LG G + ++  P  I T + + + V   +    H  A  + SG V  WG+
Sbjct: 257 WGANSYGQLGTGNKSNQALPTLINTDKERMVEV--AACHTSHTSAAKTQSGQVLMWGQ 312



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 261 SIAPLEEVGSVVQ---IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           ++ P EE+  + Q     +  +  L VT N  V++ G+  + CLG G+    ++PR I  
Sbjct: 11  ALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDV 70

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              K I  +    G  HVV   + G V+ WG      LG+G
Sbjct: 71  LCGKKIVSLSYGTG-PHVVIATADGEVFAWGHNGYSQLGNG 110


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C +  +   I    +  +  ++    H+
Sbjct: 3047 GKHALALTQDGKVFSWGEGEDGKLGHG----NCTTLDKPRLIESLKSKRIRDIACGSGHS 3102

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3103 AAIASNGELYTWGLGEYGRLGHGDTATQM-KPKLVQALSGQRVVQVACGSRDAQTMSLTA 3161

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V+T G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3162 DGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3220

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G VY WG    G
Sbjct: 3221 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG 3278

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3279 QQGNGTTIVNRKP 3291



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 15/277 (5%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S   +  V V +   H
Sbjct: 2991 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMC-EPKLIPFLSQYVIKKVAVHSGGKH 3049

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH +    + +PRL+E+LK    + +  G   +  +   
Sbjct: 3050 ALALTQDGKVFSWGEGEDGKLGHGNCTT-LDKPRLIESLKSKRIRDIACGSGHSAAIASN 3108

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYS 292
            G ++T G   +G+LGHGDT  +  PK +  L     VVQ+A G   +  +++T +G VY+
Sbjct: 3109 GELYTWGLGEYGRLGHGDTATQMKPKLVQALSG-QRVVQVACGSRDAQTMSLTADGCVYT 3167

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G    LG G       P  +   R  G+ VV+V  G +  +AL   G V+TWGKG  
Sbjct: 3168 WGDGDFGKLGRGGSDGCYTPLLVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDY 3225

Query: 353  GALGHGDE---IDKTLPEPLSSLK-SHLAVQGLSVLA 385
              LGHG++      TL E L   K  H+AV  L  LA
Sbjct: 3226 FRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3262



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 123/254 (48%), Gaps = 15/254 (5%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
            ++  V+S G    G LG G   +  V        S  HV    V V++   H   +   G
Sbjct: 3982 ADGKVYSTGYGAAGRLGIGGTDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 183  QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
             V++ G+      GH   NR  + RP+LVE L G+    +  G + +  +T  G ++T G
Sbjct: 4039 HVYSWGEGDDGKLGH--GNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWG 4096

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 299
               +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4097 KGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4155

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGHG 
Sbjct: 4156 KLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4213

Query: 360  EIDKTLPEPLSSLK 373
            +     P  +++L+
Sbjct: 4214 DDHVRRPRKVAALQ 4227



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 105/219 (47%), Gaps = 10/219 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + Q G V++ G+      GH D N     P+L+E L       +  G  ++  L+
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGD-NISHDEPKLIETLLEKNIIFIACGSTYSAALS 577

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 290
             G ++T G   +G+LGHG   D   P  +  L+    VV +A  +G S  L VT +G+V
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKG-HMVVHVACGSGDSQTLCVTASGIV 636

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G       P+ +       I+VVRV  G +   AL + G VYTWGKG
Sbjct: 637 FSWGDGDYGKLGRGGSDGSKTPKIVDKLL--DINVVRVFCGGQFSAALTARGEVYTWGKG 694

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSH----LAVQGLSVLA 385
               LGHG+E     P+ + SL+      L+V G  +LA
Sbjct: 695 DAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILA 733



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 4010 LLESIQH------VFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4059

Query: 155  TRINFPS---AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R           +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4060 DRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4118

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4119 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4178

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4179 -VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4235

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4236 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 4264



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 13/251 (5%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           + G+++  L  +  V+S G+   G LGHG   +       I      +++ ++    ++A
Sbjct: 516 SDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHD-EPKLIETLLEKNIIFIACGSTYSA 574

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            +  SG+++T G  +    GH  +N  +  P LV  LKG     V   +G + T  +T  
Sbjct: 575 ALSASGELYTWGRGNYGRLGH-GSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTAS 633

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LG G +    TPK +  L ++ +VV++  G  +  A+T  G VY++G
Sbjct: 634 GIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDI-NVVRVFCGGQFSAALTARGEVYTWG 692

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  + LGHG +     P+ I++ R K I    +S G  H++AL    +VY WG+   G 
Sbjct: 693 KGDAYRLGHGNEEHVRYPKLIESLRDKKIK--DLSVGGTHILALTEDQFVYGWGRNDYG- 749

Query: 355 LGHGDEIDKTL 365
                +ID TL
Sbjct: 750 -----QIDPTL 755



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 10/230 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3963 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMVPTLLESIQHVFIKK 4021

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  GHV++ G    G+LGHG+ L    PK +  L  +  +V IA G 
Sbjct: 4022 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGI-EIVDIACGG 4080

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4081 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4140

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
                 V++WG G  G LG G      +P  + SL       GL V+   C
Sbjct: 4141 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLA------GLGVIKVEC 4184



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 5/214 (2%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            QV+A  +  A   QS  V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2937 QVTAQRSTDAPPQQSA-VYVWGLNDKDQLGGLKGSK-IKIPVRSEVLSKLKPIHIAGGSK 2994

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 2995 TLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +G V+S+G G +  LGHG      +PR I++ + K I    ++ G  H  A+ S+G +Y
Sbjct: 3055 QDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIR--DIACGSGHSAAIASNGELY 3112

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            TWG G  G LGHGD   +  P+ + +L     VQ
Sbjct: 3113 TWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQ 3146



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 13/250 (5%)

Query: 115  QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            Q+T  R        S+V+  G +    LG G + ++     R    S    + ++     
Sbjct: 2937 QVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSKLKPIHIAGGSKT 2995

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 232
               V Q G+++ CG+ ++   G  D +  +  P+L+  L     K+V   +G      LT
Sbjct: 2996 LFIVSQEGKLYACGEGTNGRLGLGD-DYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054

Query: 233  IRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
              G V + G    G+LGHG+  TLD+P  + I  L+    +  IA G  +  A+  NG +
Sbjct: 3055 QDGKVFSWGEGEDGKLGHGNCTTLDKP--RLIESLKS-KRIRDIACGSGHSAAIASNGEL 3111

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWG 348
            Y++G G    LGHG+   +++P+ +Q     G  VV+V+ G  D   ++L + G VYTWG
Sbjct: 3112 YTWGLGEYGRLGHGDTATQMKPKLVQAL--SGQRVVQVACGSRDAQTMSLTADGCVYTWG 3169

Query: 349  KGYCGALGHG 358
             G  G LG G
Sbjct: 3170 DGDFGKLGRG 3179



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 7/141 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3987

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            S G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LGHG+ +    P+ +  L
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDL 4068



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 14/196 (7%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++  V++ G    G LG G  +  C +   ++  +   VVQV      +  + + G+V
Sbjct: 3159 LTADGCVYTWGDGDFGKLGRG-GSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEV 3217

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + +P LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3218 WTWGKGDYFRLGHGNDHH-VRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3276

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-------VTGNGVVYSFGSGS 297
            HGQ G+G T+    P  +  L++   + +++ G S+ +A         GN    +F +  
Sbjct: 3277 HGQQGNGTTIVNRKPSLVHELDDT-RMNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTAR 3335

Query: 298  N----FCLGHGEQHDE 309
            +     CLG G   ++
Sbjct: 3336 DPLGQMCLGLGNAAEQ 3351



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL +++  +V+S G    G LG G  +  C    +I+  +   V++V      + 
Sbjct: 4132 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVIKVECGSQFSV 4190

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 4191 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4249

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 4250 VFTWGDNDEGQLGDGTTSALQRPRLVHALQG-KKITRVACGSAHTLA 4295



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 12/92 (13%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+++GN  +  +GS + +            P+ + +F  K + ++   +  +H +AL  
Sbjct: 479 ILSLSGNVYIMYYGSETQY------------PQRMHSFSDKPVTMIASHSDGKHYLALTQ 526

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            G VY+WG G  G LGHGD I    P+ + +L
Sbjct: 527 DGCVYSWGNGDGGRLGHGDNISHDEPKLIETL 558


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 122/250 (48%), Gaps = 9/250 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SE 172
           Q+  G+Y T  I  + SV +CG    G LG G  + Q +   RI        +  S  S+
Sbjct: 383 QVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLP-KRILLDCVVKKLSSSKGSD 441

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + ++G V++ GD      GH +        R+     G   K + AG   +  +T
Sbjct: 442 GHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVT 501

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VVY 291
             G ++T G   HG+LGHGD+  R  P  +A L EVGSV   A G S+ L V+ +G  V+
Sbjct: 502 DDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSV---ACGSSHTLVVSKDGKTVW 558

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           SFGSG +  LG GE     +P+ ++    +G+ + +V AG    +AL ++G VYTWG G 
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEAL--QGLTIQKVCAGTWFSMALTTAGEVYTWGSGA 616

Query: 352 CGALGHGDEI 361
               G  D I
Sbjct: 617 ILGKGSADAI 626



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 18/271 (6%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            S I++  +G  +I +  +     S  SV+    +L  +L              I+F   
Sbjct: 281 KSAIMQLESGKYKIKSDLWKGQTSSEVSVYEAAINLMEILAG----------MAIDFGGV 330

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              V+ + SE+    V +   V+  G NSS      +  + I  P  V++      +QV 
Sbjct: 331 CSAVE-TTSESEVG-VYEKSDVYVWGSNSSHQLAEGNQEK-ILMP--VKSKMFTQVQQVE 385

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T  +   G V  CG  ++G+LG G++ ++  PK I     V  +        + L
Sbjct: 386 AGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTL 445

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSS 341
           A+   GVVYS+G G    LGHG      QP  I   F  K I  +   AG  H  A+   
Sbjct: 446 ALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIH--AGYRHSAAVTDD 503

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G +YTWG+G  G LGHGD   + +P  ++ L
Sbjct: 504 GKLYTWGEGDHGRLGHGDSNARYVPTQVAGL 534



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 10/247 (4%)

Query: 107  VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            VE+ +   +I  G+  T +I S+ +V +CG    G LG G  +    S + I+      +
Sbjct: 3353 VESFSIARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQG-NSDDLHSLSVISSLQGFVI 3411

Query: 166  VQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              ++ S   + H+  + +SG+VF+ GD      GH + +R   RPR +EAL+     QV 
Sbjct: 3412 TDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ-RRPRQIEALQTEQVVQVA 3470

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             G   +  +T  G + T G+   G+LG G   ++  P+ +  LE    + Q+A G ++  
Sbjct: 3471 CGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGY-RIGQVACGLNHTA 3529

Query: 283  AVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             V+ +G+ V++FG G    LG G    +L P+ ++T    GI   +V  G    + L   
Sbjct: 3530 CVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIK--KVGCGTHLTLFLTKD 3587

Query: 342  GYVYTWG 348
            G V+  G
Sbjct: 3588 GKVFVCG 3594



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +++  G N T  +   G V  CG  ++G+LG G++ D  +   I+ L+   +  +     
Sbjct: 3360 RKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVG 3419

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + LA+  +G V+S+G G    LGHG    + +PR I+  + +   VV+V+ G +H  
Sbjct: 3420 SDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTE--QVVQVACGFKHSA 3477

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G   +K LPE + +L+ +
Sbjct: 3478 VVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGY 3516



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 9/201 (4%)

Query: 177  FVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LT 232
            FV+QS G V  CG+ S    G  +++  +    ++ +L+G     +   +   G    L 
Sbjct: 3370 FVIQSDGTVLACGEGSYGRLGQGNSDD-LHSLSVISSLQGFVITDLATSVGSDGHSLALA 3428

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V + G    G+LGHG+   +  P+ I  L+    VVQ+A G  +   VT +G +++
Sbjct: 3429 ESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQ-TEQVVQVACGFKHSAVVTSDGKLFT 3487

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGY 351
            FG+G    LG G   ++  P  +     +G  + +V+ G  H   + + G  V+T+G+G 
Sbjct: 3488 FGNGDFGKLGLGSVANKKLPERVMAL--EGYRIGQVACGLNHTACVSTDGMTVWTFGEGD 3545

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LG G    K LP+ + ++
Sbjct: 3546 YGKLGLGYATMKLLPQKVETV 3566



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 7/144 (4%)

Query: 238  HTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            +  GS+ HGQL   G +   P       +E      +I  G +    +  +G V + G G
Sbjct: 3330 YMWGSDRHGQLAELGYSASVP-----VQVESFSIARKIICGQNCTFVIQSDGTVLACGEG 3384

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 355
            S   LG G   D      I + +   I  +  S G D H +AL  SG V++WG G  G L
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKL 3444

Query: 356  GHGDEIDKTLPEPLSSLKSHLAVQ 379
            GHG+   +  P  + +L++   VQ
Sbjct: 3445 GHGNPDRQRRPRQIEALQTEQVVQ 3468



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 20/227 (8%)

Query: 115  QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT  +S    +V++ G    G LG G  T + +   ++       + +V    
Sbjct: 3520 QVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLP-QKVETVCNLGIKKVGCGT 3578

Query: 173  NHAAFVLQSGQVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +   F+ + G+VF CG D   +    R+  R +F+P+++ +L     + +  G     FL
Sbjct: 3579 HLTLFLTKDGKVFVCGIDRMPWHSLFRE--RAVFKPQIMTSLSDYSIEDLAVGTEHVLFL 3636

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-------- 283
            T  G V   G    GQLG         P+ I  L + G + QI+ G ++  A        
Sbjct: 3637 TTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKG-IRQISTGRTHSAAWSAPPLPQ 3695

Query: 284  -VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V G     +FG  +N       Q+D LQ  +I+  + + + + R S
Sbjct: 3696 RVPGVTRSLTFGLPANI----PSQYDHLQGLSIELIQARVMFLHRFS 3738



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G + ++ ++ +  V++ GS    +LG G           +   +   +V +SA +N
Sbjct: 592 KVCAGTWFSMALTTAGEVYTWGSG--AILGKGSADAIVNLPMYVEDLAQYRIVDISAGDN 649

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           H   +    +VF  G NS   CG   T  PI RP  V  L+GV  +Q++AG
Sbjct: 650 HCLALTDEHEVFAWGTNSMGQCGQGHTCSPITRPLKVIGLEGVSIRQISAG 700


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 128/276 (46%), Gaps = 16/276 (5%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
            L+S++H           + + +G  H L L S   VFS G +  G LGHG   + C   
Sbjct: 380 LLESIQH------VHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRP 432

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
             I       VV ++A   H+A +  +G++FT G       GH D+   + +P+LVEALK
Sbjct: 433 RVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQM-KPKLVEALK 491

Query: 215 GVPCKQVTAGLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           GV    V  G      L I     V + G   +G+LG G +     P+ +  L   G VV
Sbjct: 492 GVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG-VV 550

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           ++  G  + +A+T +G VY++G G    LGHG      +PR +     +G +V+ ++ G 
Sbjct: 551 KVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAAL--QGKNVISIATGS 608

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            H VA    G V+TWG    G LG G      +P P
Sbjct: 609 LHCVACTDQGEVFTWGDNDEGQLGDGST--SAIPRP 642



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+VF+ G+      GH + N    RPR++E+L+G     + AG 
Sbjct: 392 VAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRPRVIESLRGKEVVDIAAGG 450

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G + T G   +G+LGHGD+ D+  PK +  L+ V  V+ +A  +G +  L 
Sbjct: 451 AHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGV-RVIDVACGSGDAQTLC 509

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P+ ++    +G  VV+V  G +  VAL  SG 
Sbjct: 510 ITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG--VVKVECGSQFSVALTKSGC 567

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           VYTWGKG    LGHG +     P  +++L+
Sbjct: 568 VYTWGKGDYHRLGHGSDDHVRRPRKVAALQ 597



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 7/170 (4%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V + G    G+LGHG+      P+ I  
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     VV IAAG ++   +T  G ++++G G    LGHG+  D+++P+ ++    KG+ 
Sbjct: 438 LRG-KEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEAL--KGVR 494

Query: 325 VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           V+ V+  +GD   + +     V++WG G  G LG G      +P+ + +L
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEAL 544



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL I++  SV+S G    G LG G  +  C    ++       VV+V      + 
Sbjct: 502 SGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKIPQKVEALIGQGVVKVECGSQFSV 560

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V AL+G     +  G       T +G 
Sbjct: 561 ALTKSGCVYTWGKGDYHRLGHGSDDH-VRRPRKVAALQGKNVISIATGSLHCVACTDQGE 619

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V T G N  GQLG G T   P P+ +A L+    + ++A G ++ LA
Sbjct: 620 VFTWGDNDEGQLGDGSTSAIPRPRLVAALQG-KKINRVACGSAHSLA 665



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 13/147 (8%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G +   G N  GQLG   G  +  PTP  ++A L  V    Q+  G   + AV      Y
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPV----QLIGGEQTLFAV------Y 357

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V++WG+  
Sbjct: 358 ATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAE 417

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LGHG+      P  + SL+    V
Sbjct: 418 DGKLGHGNRNSCDRPRVIESLRGKEVV 444


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 123/266 (46%), Gaps = 14/266 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S    V+S G    G LGHG   TQC   
Sbjct: 3259 LLESIQH------VHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHG-NRTQCDRP 3311

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       V+ ++    H+A V  SG+++T G       GH D+   + RP++ +ALK
Sbjct: 3312 RVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQL-RPKMADALK 3370

Query: 215  GVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G   +  L I    +V + G   +G+LG G +     P+ +  L  +G V 
Sbjct: 3371 GYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIG-VC 3429

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++ G 
Sbjct: 3430 KVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAAL--QGKKIISIATGS 3487

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHG 358
             H VA    G VYTWG    G LG G
Sbjct: 3488 LHCVACSDQGEVYTWGDNDEGQLGDG 3513



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 17/272 (6%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQ 180
            ++ +   V++CG    G LG G  ++Q V   +     + +VV+   V +   HA  +  
Sbjct: 2253 VVTAEGKVYACGEGTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTV 2310

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T 
Sbjct: 2311 DGKVFSWGEGDDGKLGHL-SRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTW 2369

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGS 297
            G   +G+LGHGD+  +  PK +  L  VG  V+Q+A G   +  L +T  G+VYS+G G 
Sbjct: 2370 GLGEYGRLGHGDSTTQLRPKLVKAL--VGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               LG G       P  ++  R  G  V+++  G +  +AL  +G V+TWGKG    LGH
Sbjct: 2428 FGKLGRGGSEGCSVPHNVE--RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGH 2485

Query: 358  GDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            G +     P+    LK     H+AV  L  LA
Sbjct: 2486 GTDSHVRKPQVAEGLKGKKIIHVAVGALHCLA 2517



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     +       +  ++   +H+A V
Sbjct: 2302 GRHAMALTVDGKVFSWGEGDDGKLGH-LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAV 2360

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
              SG+++T G       GH D+   + RP+LV+AL G    QV  G      LT+   G 
Sbjct: 2361 TSSGELYTWGLGEYGRLGHGDSTTQL-RPKLVKALVGKRVIQVACGSRDAQTLTLTDEGM 2419

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P ++  L   G V+QI  G  + LA+T  G V+++G G
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQG-VIQIECGAQFSLALTKAGQVWTWGKG 2478

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+  +    KG  ++ V+ G  H +A+  +G V+ WG    G  G
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGL--KGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG 2536

Query: 357  HG 358
             G
Sbjct: 2537 DG 2538



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 129/272 (47%), Gaps = 14/272 (5%)

Query: 109  TSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 165
            TS   +QI  G      ++ +  +++ G    G LG G   T  VS T     S  HV  
Sbjct: 3212 TSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGIG--GTDSVS-TPTLLESIQHVHI 3268

Query: 166  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
              V V++   HA  +   G+V++ G+      GH +  +   RPR++E+L+G     +  
Sbjct: 3269 KKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQ-CDRPRVIESLRGKEVIDIAC 3327

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYM 281
            G   +  +T  G ++T G   +G+LGHGD+ D+  PK    L+    V+ +A  +G S  
Sbjct: 3328 GGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGY-RVIDVACGSGDSQT 3386

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L ++ +  V+S+G G    LG G       P+ +       I V +V  G +  +AL  S
Sbjct: 3387 LCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDAL--SSIGVCKVECGSQFSIALTKS 3444

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G VYTWGKG    LGHG +     P  +++L+
Sbjct: 3445 GCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQ 3476



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P  +E+L  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3205 PTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQ 3264

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +PR I++ R  G  V
Sbjct: 3265 HVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLR--GKEV 3322

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            + ++ G  H   + SSG +YTWGKG  G LGHGD  D+  P+   +LK +  +
Sbjct: 3323 IDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVI 3375



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 9/249 (3%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +++  G +  G LG G E  +    T I   ++   +Q+   E     V   G+++  G 
Sbjct: 3182 TIYGWGHNHRGQLG-GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240

Query: 190  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 247
             +S   G   T+  +  P L+E+++ V  K+V   +G      L++ G V++ G    G+
Sbjct: 3241 GASGRLGIGGTDS-VSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 248  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
            LGHG+      P+ I  L     V+ IA G ++   VT +G +Y++G G    LGHG+  
Sbjct: 3300 LGHGNRTQCDRPRVIESLRG-KEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSE 3358

Query: 308  DELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
            D+L+P+       KG  V+ V+  +GD   + +     V++WG G  G LG G      +
Sbjct: 3359 DQLRPKMADAL--KGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV 3416

Query: 366  PEPLSSLKS 374
            P+ + +L S
Sbjct: 3417 PQKVDALSS 3425



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 5/254 (1%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
             + VF  G +    LG GP  ++  +     F S+  VV  +        V   G+V+ C
Sbjct: 2205 QTKVFVWGLNDKDQLG-GPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYAC 2263

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G   +++ +  P+ V  L     K+V   +G      LT+ G V + G    
Sbjct: 2264 GEGTNGRLG-LGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGH   ++   P+ +  L+    +  IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2323 GKLGHLSRMNCEKPRLLEALK-TKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
               +L+P+ ++    K +  V   + D   + L   G VY+WG G  G LG G     ++
Sbjct: 2382 STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSV 2441

Query: 366  PEPLSSLKSHLAVQ 379
            P  +  L     +Q
Sbjct: 2442 PHNVERLNGQGVIQ 2455



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 1/139 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P +I  L  +   +QI  G   + AVT +G +Y+ G
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSL-RPIQIVGGEQTLFAVTADGKLYATG 3239

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G++  LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+G  G 
Sbjct: 3240 YGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 355  LGHGDEIDKTLPEPLSSLK 373
            LGHG+      P  + SL+
Sbjct: 3300 LGHGNRTQCDRPRVIESLR 3318



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     V+S G    G LG G  +  C     +   +   V+Q+      +  + ++GQV
Sbjct: 2414 LTDEGMVYSWGDGDFGKLGRG-GSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQV 2472

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  T+  + +P++ E LKG     V  G      +T  G V   G N 
Sbjct: 2473 WTWGKGDYFRLGH-GTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDND 2531

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G G T     P  +  LE V  + ++A G S+  A
Sbjct: 2532 HGQQGDGSTTVNKKPALVQGLEGV-RITRVACGSSHSTA 2569



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL IS+  +V+S G    G LG G  +  C    +++  S+  V +V      + 
Sbjct: 3381 SGDSQTLCISDDDNVWSWGDGDYGKLGRG-GSDGCKVPQKVDALSSIGVCKVECGSQFSI 3439

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V AL+G     +  G       + +G 
Sbjct: 3440 ALTKSGCVYTWGKGDYHRLGHGSDDH-VRRPRKVAALQGKKIISIATGSLHCVACSDQGE 3498

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +  L++   +  +A G ++ +A
Sbjct: 3499 VYTWGDNDEGQLGDGTTNAIQRPRIVTALQD-KKITNVACGSAHTVA 3544



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 255 DRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           D+ TPK ++ L+E   V + + +     LAVT  G+++SFG+G    LG G       P+
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +     +G H V    G++  V L  +G VYT
Sbjct: 64  LVDKL--QGQHAVIACCGNQFSVILTKTGTVYT 94


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 18/219 (8%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++    HAA V + G+VF  GD S    GH   +  +  P+LVEAL     + V  G   
Sbjct: 312 IACGNRHAALVTKQGEVFCWGDESGGRLGH-GVDVDVAHPKLVEALATTNTEFVACGEYH 370

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAV 284
           +  +T+ G + T G  TH  G LGHG+ +   TPK +  PLE +  V  +A G  +   V
Sbjct: 371 SCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGI-RVSSVACGVWHTALV 429

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------ 338
           T  G +++FG G+   LGHG++     P+ +++   KG+  VRV+ G  H  A+      
Sbjct: 430 TSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESL--KGLKTVRVACGVWHTAAVVEVMVG 487

Query: 339 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 SSG ++TWG G  G LGHGD+  K +P  +++L
Sbjct: 488 YSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAAL 526



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 130/277 (46%), Gaps = 28/277 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S  +F+ G      G+LGHG + +      R+  P     V  V+  
Sbjct: 364 VACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTP-KRVGGPLEGIRVSSVACG 422

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +V  G+  T  +
Sbjct: 423 VWHTALVTSAGQLFTFGDGTFGVLGHGD-KRSVALPKEVESLKGLKTVRVACGVWHTAAV 481

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G    G+LGHGD   +  P  +A L +  +  Q+A G + 
Sbjct: 482 VEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDY-NFKQVACGHTL 540

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +A+T NG V++ GS     LG     G+    ++ R  + F      V  ++ G  HV 
Sbjct: 541 TVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAF------VEEIACGAYHVA 594

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            L +   VYTWGKG  G LGHGD +D+  P  + +LK
Sbjct: 595 VLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALK 631



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +HT L++++  +F+ G    GVLGHG + +  +    +        V+V+    H
Sbjct: 419 VACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALP-KEVESLKGLKTVRVACGVWH 477

Query: 175 AAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            A V++           SG++FT GD      GH D  + +  P  V AL     KQV  
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV-PTCVAALVDYNFKQVAC 536

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LTI G V T GS+ +GQLG     D   P  +        V +IA G  ++  
Sbjct: 537 GHTLTVALTINGRVFTMGSSLYGQLGDVRA-DGKLPGLVEGRLWEAFVEEIACGAYHVAV 595

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +T    VY++G G+N  LGHG+  D   P  ++  + K +  V   +G
Sbjct: 596 LTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSG 643



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 6/194 (3%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G VF  G++     G   T+  +  P+ +E+   +    +  G      +T +G V   G
Sbjct: 275 GDVFLWGESVGSGDGGIKTDSLL--PKALESAVVLDVHHIACGNRHAALVTKQGEVFCWG 332

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNF 299
             + G+LGHG  +D   PK +  L    +   +A G  +  AVT +G ++++G G  S  
Sbjct: 333 DESGGRLGHGVDVDVAHPKLVEALATTNTEF-VACGEYHSCAVTLSGDLFTWGDGTHSYG 391

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ +     +GI V  V+ G  H   + S+G ++T+G G  G LGHGD
Sbjct: 392 LLGHGNDISHWTPKRVGG-PLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGD 450

Query: 360 EIDKTLPEPLSSLK 373
           +    LP+ + SLK
Sbjct: 451 KRSVALPKEVESLK 464



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 27/201 (13%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           + +R    V H++ +VE   G        Y     S+  +F+ G    G LGHG +  + 
Sbjct: 467 KTVRVACGVWHTAAVVEVMVG--------YSNAGGSSGKLFTWGDGDKGRLGHGDKEQKL 518

Query: 152 V-----SFTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP- 203
           V     +    NF   A  H + V+ + N   F + S      GD  +      D   P 
Sbjct: 519 VPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGDVRA------DGKLPG 572

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   RL EA      +++  G      LT +  V+T G   +G+LGHGD +DR TP  + 
Sbjct: 573 LVEGRLWEAF----VEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVE 628

Query: 264 PLEEVGSVVQIAAGPSYMLAV 284
            L+E   V  +A G  +  A+
Sbjct: 629 ALKE-KQVKSVACGSGFTAAI 648


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1317

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1318 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 1376

Query: 225  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 1377 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 1435

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1436 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1493

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 1494 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 1525



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 20/236 (8%)

Query: 114  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
            + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 1312 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 1369

Query: 172  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 1370 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 1428

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
              G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 1429 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 1486

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G +  V
Sbjct: 1487 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGADQSV 1540



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 10/170 (5%)

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G+     +T +G V T      G+LGHG  +D   PK +  L  + ++  +A G  +
Sbjct: 1207 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFL-ALTNIDFVACGEYH 1265

Query: 281  MLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              AV+ +G ++++G G +    LGHG       P+ + +   +G+ V+ V+ G  H    
Sbjct: 1266 TCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRV-SGPVEGLQVLSVACGTWHSALA 1324

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             ++G ++T+G G  G LGHGD    + P+ +  L       GL  L   C
Sbjct: 1325 TANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML------SGLKTLKVAC 1368


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 358 GDEIDKTLP 366
               D+  P
Sbjct: 277 DSMNDEVNP 285



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
          Length = 560

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +VQ++  ++H+  + + G +FT G N+    G    +  I +P+LV+ LKG+P  Q+ AG
Sbjct: 85  IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAG 144

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +++ G V++ G N  GQLG G T DR  P  +  LE   +V  I+ G  +   +
Sbjct: 145 GAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVF-ISCGEDHTAVL 203

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 343
           + NG+V++FG+G    LGH    +E +PR +      G  V  V+ G +H +V + S   
Sbjct: 204 SKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELW--GARVSLVACGRQHTLVYVPSLDK 261

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           VY++G  Y G LG   + ++ +P P++S
Sbjct: 262 VYSFG-SYEGQLGSERKANQLIPLPINS 288



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 17/220 (7%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP--IFRPRLVEAL 213
           R+ F     V  ++  E H       G+++ C            T  P    + RLV+ L
Sbjct: 32  RVWFKGKEKVWCLNCDETHVLVCSCDGKLYECW-----------TTAPGKTSKLRLVKEL 80

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVV 272
           +     Q+  G + +  L+  G + T G NTHGQLG G   L    P+ +  L+ +  + 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGI-PLA 139

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIAAG ++ + V+ +G VYS+G      LG G   D   P  ++         V +S G+
Sbjct: 140 QIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEH--WKAVFISCGE 197

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +H   L  +G V+T+G G  G LGH    ++  P  ++ L
Sbjct: 198 DHTAVLSKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAEL 237



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 5/114 (4%)

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIH 324
           E   +VQIA G  + +A++  G ++++G  ++  LG G Q D L  +P+ ++    KGI 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQ-DLLISKPQLVKGL--KGIP 137

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + +++AG  H V +  SG VY+WGK   G LG G   D+  P  + +L+   AV
Sbjct: 138 LAQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAV 191


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 135/268 (50%), Gaps = 8/268 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  HT+ L++ + V S G    G LGHG +T   +  T+++      +V V+   
Sbjct: 15  LLISAGASHTVALLTGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGA 73

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++     +SG+ V++ G       GH D +  +F P  + AL+G+  KQ++ G      +
Sbjct: 74  DYTVARSKSGKDVYSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAV 132

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T+   V + G N +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLY 191

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G    LG G+ +D L P  +      G  +V VS G  H +++ SSG +YT G   
Sbjct: 192 GWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSK 248

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G LGHGD  D  +P  + +L   L  Q
Sbjct: 249 YGQLGHGDFEDCLVPRKVQALSDKLISQ 276



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 103/211 (48%), Gaps = 5/211 (2%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S  HV+ +SA  +H   +L    V + G       GH DT+  +  P  + A  G     
Sbjct: 10  SPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVS 68

Query: 221 VTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           VT G ++T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QI+ G  
Sbjct: 69  VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDC 127

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAVT    V S+G   N  LG G   D   P+ I  F  +GI +  V+AG EH VA+ 
Sbjct: 128 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAF--EGIRIKMVAAGAEHSVAIT 185

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
             G +Y WG G  G LG GD  D+ +PE ++
Sbjct: 186 EDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN 216



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 6/215 (2%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  +T+  S S   V+S G    G LGHG  +   +    I       + Q+S  
Sbjct: 67  VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP-IRALQGLRIKQISCG 125

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H   V    +V + G N +   G   T +    P+ + A +G+  K V AG   +  +
Sbjct: 126 DCHCLAVTMENKVLSWGRNQNGELG-LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 184

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GDT DR  P+ +    +   +V ++ G  + ++++ +G +Y
Sbjct: 185 TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLY 242

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           + G      LGHG+  D L PR +Q    K I  V
Sbjct: 243 THGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 277



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           HV+ +SAG  H VAL +   V +WG+G  G LGHGD  D+ LP  LS+ 
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAF 61


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 128/271 (47%), Gaps = 13/271 (4%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   ++ G  H+L L S+ +V++ G +  G LG G  T +         PS   V QVSA
Sbjct: 71  GEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS---VAQVSA 127

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            E+H+  +   G+VF  G NSS   G     D+  P+    L         K V AG N 
Sbjct: 128 GESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDST---IKVVAAGGNH 184

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  G V   G N+ GQLG+  T+D   P  +  L    +V  +AAG ++ LA+T +
Sbjct: 185 SLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA--NVTAVAAGGNHSLALTSD 242

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G +Y++G  S+  LG G   +   P  +      G   V VSAG +H +AL   G VY W
Sbjct: 243 GRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLP-AGSKPVAVSAGKDHSLALMQDGTVYAW 301

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G    G LG+G      +P  ++ L +  AV
Sbjct: 302 GGNSYGQLGNGTTTASEMPVQVTGLANVTAV 332



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 17/258 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  H+L L  +  VF+ G +  G LG G               + + +  V+A  N
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGN 183

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCK--QVTAGLNFT 228
           H+  +   G+VF  G NSS   G+    D++ P+        ++G+P     V AG N +
Sbjct: 184 HSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPV-------QVQGLPANVTAVAAGGNHS 236

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G ++  G N+ GQLG G T +  TP  +A L      V ++AG  + LA+  +G
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDG 296

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY++G  S   LG+G       P  +        +V  VSAG    +AL S GYVY WG
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQVTGLA----NVTAVSAGGSDSLALTSDGYVYAWG 352

Query: 349 KGYCGALGHGDEIDKTLP 366
               G LG G   ++  P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 108/214 (50%), Gaps = 15/214 (7%)

Query: 159 FPSAAHVV---QVSASENHAAFVLQSGQ-VFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL 213
           +P++A V+    VSA  +H+  VL S Q V+  GDN++   G    T R    P      
Sbjct: 63  YPASAAVLGEAAVSAGGSHS-LVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPA----- 116

Query: 214 KGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +G+P   QV+AG + +  LT  G V   G N+ GQLG G T D  TP  +  L    ++ 
Sbjct: 117 QGLPSVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +AAG ++ LA+T +G V+++G  S+  LG+    D   P  +Q       +V  V+AG 
Sbjct: 177 VVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA---NVTAVAAGG 233

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            H +AL S G +Y WG    G LG G   + + P
Sbjct: 234 NHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTP 267



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 7/174 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S+  +++ G +  G LG G  +           P+ +  V VSA ++H
Sbjct: 229 VAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDH 288

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  ++Q G V+  G NS    G+  T      P  V  L  V    V+AG + +  LT  
Sbjct: 289 SLALMQDGTVYAWGGNSYGQLGNGTTTASEM-PVQVTGLANVTA--VSAGGSDSLALTSD 345

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYMLAVT 285
           G+V+  G N+ GQLG G T +R TP  +  +   G++   +Q++ G S  +A++
Sbjct: 346 GYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIALS 399



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P S A L E      ++AG S+ L +T +  V+++G  +N  LG G       P   Q  
Sbjct: 64  PASAAVLGEAA----VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGL 119

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V +VSAG+ H +AL   G V+ WG    G LG G   D   P  +  L +   +
Sbjct: 120 P----SVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTI 175

Query: 379 Q 379
           +
Sbjct: 176 K 176


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 5/267 (1%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +V+  G+++ G LG G  E  Q +    +++  ++ V Q +   +H   + + G++F+CG
Sbjct: 2   AVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP+ + +L+      V+ G   +  LT  G V + GSN+ GQL
Sbjct: 62  NNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQL 121

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH   L   T   +       +VVQIA+G  + LA+T +G ++S+G+     LG G   +
Sbjct: 122 GHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGE 181

Query: 309 E-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           + + P  +++    GI +  ++ G  H  A+  SG ++ WGK   G LG  D + +  P+
Sbjct: 182 KVVTPTLVKSL--AGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQ 239

Query: 368 PLSSLKSHLAVQGLSVLAEVCPTIVQE 394
            L +L+ +L V+ +S   +    + QE
Sbjct: 240 QLKTLR-NLGVRYISCGDDFSAFLTQE 265



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 11/268 (4%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---V 165
           S+   Q   G  HTLL++ +  +FSCG++  G LGH    T C+   R  F S+     V
Sbjct: 35  SSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHD---TDCLPNKRPQFISSLENYIV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS    H+  +   GQVF+ G NS    GH    +    PR+++ +      Q+ +G 
Sbjct: 92  THVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQ 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  LT  G + + G+N +GQLG G T ++  TP  +  L  +  +  IA G ++  AV
Sbjct: 152 FHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGI-PIAFIACGGNHSFAV 210

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G ++ +G  +   LG  +      P+ ++T R  G+  +  S GD+    L   G V
Sbjct: 211 SKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYI--SCGDDFSAFLTQEGGV 268

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +T G G  G LGHG   ++ LP  +  L
Sbjct: 269 FTCGAGTFGQLGHGTCSNEILPRMVFEL 296



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 6/181 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI +G++H+L ++NS  +FS G++  G LG G    + V+ T +   +   +  ++   
Sbjct: 145 VQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGG 204

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D     F P+ ++ L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCF-PQQLKTLRNLGVRYISCGDDFSAFLT 263

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 264 QEGGVFTCGAGTFGQLGHGTCSNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKI 321

Query: 291 Y 291
           Y
Sbjct: 322 Y 322


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 130/293 (44%), Gaps = 23/293 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  +   
Sbjct: 330 VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G
Sbjct: 390 VSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRG 448

Query: 216 VPCKQVTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPK 260
           +   +V  G+  T         L+  G         ++T G    G+LGHGD   R  P+
Sbjct: 449 LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +A L E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++    
Sbjct: 509 CVAALMEE-RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIA 566

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
               V  V+ G  HV  L S   VYTWGKG  G LGHGD   +  P  +  LK
Sbjct: 567 NSF-VEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLK 618



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 20/216 (9%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    P+ ++   E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 338
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 339 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              SS  +YTWG G  G LGHGD   + +PE +++L
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ + + + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV-SGQMEGIR 398

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLR 447



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 19/238 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----------ETTQCVSFTRIN---FPS 161
           I+ G +HT +++++  +F+ G    G LGHG           ET + +  T++    + +
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 162 AAHVVQVSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           AA V  ++  S++  +    S +++T GD      GH D N P   P  V AL      Q
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD-NEPRLVPECVAALMEERICQ 520

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V  G + T  LT  G V+T GS  +GQLG   T +   P  +        V ++A G  +
Sbjct: 521 VACGNDLTVALTTAGRVYTMGSTAYGQLGSA-TANGKLPTCVEGEIANSFVEEVACGSYH 579

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  +T    VY++G G N  LGHG+ +    P  +   + K   V  V+ G +  V +
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDK--QVKNVACGSKFTVVI 635



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           LD   PK++     V  V  IA G  + + VT  G ++S+G  S   LGHG + D   P+
Sbjct: 276 LDALLPKALESTV-VLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPK 334

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS 370
            I T    G +V  V+ G+ H  A+  SG +YTWG G    G LGHG E+   +P+ +S
Sbjct: 335 IIDTL--SGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVS 391


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 115/250 (46%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N+ +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NNEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +  +VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GIHV RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+S  K  +
Sbjct: 301 TPISVEKDRI 310



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 3/154 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
               G +G G   ++ +P  ++    + AV  ++
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIA 211



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 58  VLYTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATT 116

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 117 EGEVFTWGHNAYSQLGNG 134


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V  SG+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGY 351
           G      +G G+  D   P+ I      G H  VV+VS G  H VA+     VY+WG+G 
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLISI---PGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGT 347

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHGD +D++ P+ + +L +
Sbjct: 348 SGQLGHGDAVDRSAPKGIQALSA 370



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 7/261 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   
Sbjct: 8   LLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRI-IGALNDCEISLVACGA 66

Query: 173 NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H  A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLGHGNSS-DLFVPHPIKALQGLEIRQIACGDSHCLAV 125

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT +G +Y
Sbjct: 126 TADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDSGKLY 184

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G   
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSK 242

Query: 352 CGALGHGDEIDKTLPEPLSSL 372
            G LGHGD  D  LP  +++L
Sbjct: 243 YGQLGHGDYADHLLPHQVAAL 263



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  +++S  ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 10/164 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDC-EISLVACGADH 68

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           + G VY+WG+   G LG GD  D  +P  L      LA +G+SV
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKL------LAFEGVSV 164



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ ++AG S+ +A+    VV SFG G +  LGHG+  D L PR I       I +  V+ 
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISL--VAC 64

Query: 331 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G +H  A  ++   +Y+WG G  G LGHG+  D  +P P+ +L      QGL +    C
Sbjct: 65  GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL------QGLEIRQIAC 117


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   +FS G    G LG      +CV   R I   S   + QV+    
Sbjct: 89  VSGGESHTLALNDKGQIFSWGLGSDGQLGLN-NFEECVRVPRNIKCLSDVQIAQVACGYR 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ G N     G       I  P+++++L+G+P  Q++AG   +  +T+
Sbjct: 148 HSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  DT DR  P  +  L     V+ ++ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRS-QRVIYVSCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-SSGYVYTWGKGYC 352
           G+G    LGH   + E+ PR +  F   G  V ++S G +H +A   SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTNHEINPRKV--FELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG     ++  P P+ 
Sbjct: 325 GQLGTRSTCNRKSPAPVK 342



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT  L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKKPEHVVALD---AQIIVAVSGGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQ+F+ G  S    G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQV 158

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG  + +D   P  +++ R +   V+ VS G++H  AL   G V+T+G G  G 
Sbjct: 216 RNKFGQLGLNDTNDRWFPALLKSLRSQ--RVIYVSCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQ 379
           LGH     +  P  +  L  ++  Q
Sbjct: 274 LGHNSTNHEINPRKVFELMGNIVTQ 298



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +P  +P  V AL       V+ G + T  L  +G + + G  + GQLG  + 
Sbjct: 65  QLGHE---KPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ IQ+   +GI   ++SAG  H  A+  SG V+ WG+   G LG  D  D+  P  L S
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKS 238

Query: 372 LKSHLAV 378
           L+S   +
Sbjct: 239 LRSQRVI 245


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 1848 VYACGEATNGRLGLG-VSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSW 1906

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 1907 GEGDDGKLGHF-SRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  VG  VVQ+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 1966 LGHGDNTTQLKPKMVKVL--VGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2023

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 2024 GSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2081

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 2082 KPQVVEGLRGKKIVHVAVGALHCLA 2106



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L ++  VFS G    G LGH      C     I    +  +  ++   +H+A +
Sbjct: 1891 GRHATALTADGKVFSWGEGDDGKLGHF-SRXNCDKPRLIEALKSRRIRDIACGSSHSAAL 1949

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1950 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL 2008

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2009 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2067

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2068 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2125

Query: 357  HG 358
            +G
Sbjct: 2126 NG 2127



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2866 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 2919

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 2920 VIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 2978

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  +  L  +G+V +
Sbjct: 2979 HRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAV-K 3037

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3038 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3095

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3096 HCVCCTEDGEVYTWGDNDEGQLGDG 3120



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 2878 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 2936

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 2937 AHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 2995

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  +      G+  V+V  G +  VAL  SG 
Sbjct: 2996 LTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDAL--TGLGAVKVECGSQFSVALTKSGA 3053

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3054 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 3089



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGE 1853

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 1854 ATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGK 1913

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + + I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 1914 LGHFSRXNCDKPRLIEALKSRRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 1971

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  VQ
Sbjct: 1972 TTQLKPKMVKVLVGHRVVQ 1990



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA + VQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1825 SALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKK 1884

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT  G V + G    G+LGH    +   P+ I  L+    +  IA G 
Sbjct: 1885 VAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKS-RRIRDIACGS 1943

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1944 SHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--VGHRVVQVACGSRDAQTL 2001

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2002 ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL 2037



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 2864 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 2923

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 2924 LRGI-EVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2982

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             V   +GD   + L     V++WG G  G LG G      +P  + +L    AV+
Sbjct: 2983 DVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVK 3037



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1939 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLVGHRVVQVACGSRD 1997

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1998 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2056

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2057 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2115

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2116 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2158



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G V+  G N  GQLG   G  +  PTP +++A L       Q+  G   + AVT +G +Y
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPA----QLIGGEQTLFAVTADGKLY 2843

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2844 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 2904 DGKLGHGNRSPCDRPRVIESLR 2925



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +++  +    V+V      + 
Sbjct: 2988 SGDAQTLCLTEDDTVWSWGDGDYGKLGRG-GSDGCKVPMKVDALTGLGAVKVECGSQFSV 3046

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3047 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3105

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3106 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3151



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 1999 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 2057

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2058 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2116

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2117 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2160


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 134/247 (54%), Gaps = 17/247 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
           Q+  G++ T LI S+ +V +CG    G LG G ++  C S  +       +V ++S+S  
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLG-DSNNC-SVPKKPLFDKKYVKKISSSKG 489

Query: 172 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
            + H+  +  +G+V++ GD      GH  T+     P+LV+  L G   K V+AG   + 
Sbjct: 490 SDGHSLALTTTGEVYSWGDGDYGKLGH-GTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSA 548

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 288
            +T  G ++T G    G+LGH  T  +  P  +  +E VG V   A G S+ LAV+ +G 
Sbjct: 549 AVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGLV---ACGGSHTLAVSQDGK 605

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++SFG G N  LGHG+ + +L+P+ I+     G+++ +V+ G +  +A+ SSG +Y WG
Sbjct: 606 TIWSFGGGENGKLGHGDTNRQLKPKVIEALN--GLYIRKVACGSQSSLAVTSSGQLYAWG 663

Query: 349 KGYCGAL 355
              CGA+
Sbjct: 664 ---CGAI 667



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 16/265 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           H+L L +   V+S G    G LGHG  +TQ +    +  P    VV+ VSA   H+A V 
Sbjct: 493 HSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIP-KLVKGPLVGKVVKCVSAGYRHSAAVT 551

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
           + G+++T GD      GH  T+   F P  V++++ V    V  G + T  ++  G  + 
Sbjct: 552 EDGELYTWGDGEFGRLGHDYTSSKNF-PTKVQSIESVGL--VACGGSHTLAVSQDGKTIW 608

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT  +  PK I  L  +  + ++A G    LAVT +G +Y++G G+ 
Sbjct: 609 SFGGGENGKLGHGDTNRQLKPKVIEALNGL-YIRKVACGSQSSLAVTSSGQLYAWGCGAI 667

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              G  E +  L+PR ++  + K   +V ++ GD HV+AL     VY WG    G  G G
Sbjct: 668 LGCGSAE-YTALRPRLVEDLQSK--RMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG 724

Query: 359 DEIDKTLPEPLSSLKSHLAVQGLSV 383
                    P++  K  + + G+SV
Sbjct: 725 HA-----QSPITRPKRVIGLDGVSV 744



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 97/212 (45%), Gaps = 15/212 (7%)

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGL 225
           S S ++A      G+V+  G N    C H+        I  P+         C+QV AG 
Sbjct: 384 STSHSNANLSGSCGEVYVWGSN----CTHQLAEGGQEKITTPKYSAVF--TDCQQVEAGQ 437

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS---YML 282
             T  +   G V  CG  ++G+LG GD+ +   PK   PL +   V +I++      + L
Sbjct: 438 FCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKK--PLFDKKYVKKISSSKGSDGHSL 495

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T  G VYS+G G    LGHG    +  P+ ++     G  V  VSAG  H  A+   G
Sbjct: 496 ALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKG-PLVGKVVKCVSAGYRHSAAVTEDG 554

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            +YTWG G  G LGH     K  P  + S++S
Sbjct: 555 ELYTWGDGEFGRLGHDYTSSKNFPTKVQSIES 586



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 115 QITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  G   +L +++S     + CG+    +LG G      +    +    +  +V ++  
Sbjct: 642 KVACGSQSSLAVTSSGQLYAWGCGA----ILGCGSAEYTALRPRLVEDLQSKRMVDIACG 697

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++H   +    +V+  G+N+   CG      PI RP+ V  L GV   QV+AG
Sbjct: 698 DSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAG 750


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 130/268 (48%), Gaps = 11/268 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-AS 171
           M IT G+Y T  ++SN +V + G    G LG+G   +       I FP+    +  S  S
Sbjct: 164 MSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPIL-IEFPAPVRKILTSKGS 222

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  + ++GQ++T GD      GH D+      P+L+EAL          G   +  +
Sbjct: 223 DGHSMAIGKNGQIWTWGDGDYGKLGHGDSTTQK-SPKLIEALASRVIVDADCGHRHSAAV 281

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
              GH++  G   +G+LG GD L R  P  +  + E   VV    G ++ + ++ +G  V
Sbjct: 282 CDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQVV---CGFNHTVVLSTDGRTV 338

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG+  N  LGHG+ + + +P+ I     +G+ + +++AG +   A+   G +Y WG G
Sbjct: 339 WSFGAAENGKLGHGDTNRQFRPKIIDAL--QGLTITQIAAGTQISAAVTREGALYVWGFG 396

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            C   G  DE    LP+ +  L   + +
Sbjct: 397 PCLGNGSSDET-FMLPKVVRGLSGRVVI 423



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 4/191 (2%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G NSS           +  PR +     V    +TAG   T  +   G V   G 
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKV--MSITAGQYCTFAVLSNGTVMANGK 187

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            ++G+LG+G +    +P  I     V  ++       + +A+  NG ++++G G    LG
Sbjct: 188 GSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYGKLG 247

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG+   +  P+ I+    + I  V    G  H  A+  +G++Y WG+G  G LG GD + 
Sbjct: 248 HGDSTTQKSPKLIEALASRVI--VDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ 305

Query: 363 KTLPEPLSSLK 373
           +++P  +  ++
Sbjct: 306 RSVPVQVPDIR 316



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 7/145 (4%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   GSN+  QL    T   P  K + P  L   G V+ I AG     AV  NG V + 
Sbjct: 130 EVFCWGSNSSQQL----TDATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVLSNGTVMAN 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G GS   LG+G       P  I+ F      ++     D H +A+  +G ++TWG G  G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYG 244

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAV 378
            LGHGD   +  P+ + +L S + V
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIV 269



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           DI E S    Q+  G  HT+++S    +V+S G++  G LGHG +T +      I+    
Sbjct: 314 DIREAS----QVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG-DTNRQFRPKIIDALQG 368

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             + Q++A    +A V + G ++  G     C G+  ++     P++V  L G     + 
Sbjct: 369 LTITQIAAGTQISAAVTREGALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIA 426

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYM 281
            G N    LT  G V T G+N +GQ G G  +   T P+ +  L   G + Q+ AG ++ 
Sbjct: 427 IGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAG-IQQVTAGTTHT 485

Query: 282 L 282
            
Sbjct: 486 F 486


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 133/292 (45%), Gaps = 24/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S    ++   +   G+LG G E TQ V   +++ P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP-RKLDGPLEGIHVSSVSCG 420

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSIPREVESLKGLRTMRAACGVWHTAAV 479

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEP-NFCQVACGHS 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              A+T  G VY+ GS     LG+  Q D + P  ++    K   V  ++ G  HV  L 
Sbjct: 539 LTAALTTTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNF-VEELACGAYHVAVLT 596

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA---VQGLSVLAEVC 388
           S   VYTWGKG  G LGHGD  D+  P  + +LK       V G S  A +C
Sbjct: 597 SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAIC 648



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 19/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T+ G ++  G N +  G LG G    +  P+ +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGI-HVSSVSCGPWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESL--KGLRTMRAACGVWHTAAVVEI 482

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                     SSG ++TWG G    LGHGD+  + +P  +++L
Sbjct: 483 MVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATL 525



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 10/186 (5%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 353

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKG 322
           L+   +V  +A G  +  AVT +G +Y +G  + NF  LG G +  +  PR +     +G
Sbjct: 354 LKNF-NVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDG-PLEG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           IHV  VS G  H   + S+G ++T+G G  G LGHGD I  ++P  + SLK      GL 
Sbjct: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLK------GLR 465

Query: 383 VLAEVC 388
            +   C
Sbjct: 466 TMRAAC 471


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 19/289 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVSA 170
           QI  G+Y T +I  +  V +CG    G LG G  T Q     R+NF +      V     
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQ-TQLKRLNFDNECLVKSVSSSKG 457

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCKQVTAGLNF 227
           S+ H   +   G+V++ GD      GH ++      P+LVE   G   V C  + AG   
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKI-PKLVEGALGNKVVCC--IAAGYRH 514

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +T  G ++T G   +G+LGHGD   R  P  +   ++V +V Q+A G ++ + V+ +
Sbjct: 515 SAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQV---KDVANVGQVACGSAHTVCVSQD 571

Query: 288 G-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           G  V+SFGSG N  LGH + +   +P+ I+    +G+ + +V  G +  +AL S+G VY 
Sbjct: 572 GQTVWSFGSGDNGKLGHSDTNRVYKPKVIEAL--QGMVIRKVCCGSQCSLALTSTGQVYV 629

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQED 395
           WG G     G  D    T P+ L +L+SH +V  +SV    C  + Q++
Sbjct: 630 WGCGPSLGTGSVDATSAT-PKLLLALQSH-SVVDISVGDSHCVALTQDN 676



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 21/258 (8%)

Query: 106 IVETSAGNMQ---ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           +VE + GN     I  G  H+  ++ +  +++ G    G LGHG   ++ V    +    
Sbjct: 495 LVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVP---VQVKD 551

Query: 162 AAHVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            A+V QV+    H   V Q GQ    F  GDN     GH DTNR +++P+++EAL+G+  
Sbjct: 552 VANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKL--GHSDTNR-VYKPKVIEALQGMVI 608

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++V  G   +  LT  G V+  G       G  D     TPK +  L+   SVV I+ G 
Sbjct: 609 RKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDA-TSATPKLLLALQS-HSVVDISVGD 666

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVV- 336
           S+ +A+T +  VY++G+ S    G G     + +P+ +      G+ V ++SAG  H V 
Sbjct: 667 SHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKV--LGLDGVAVHQISAGTSHTVA 724

Query: 337 --ALDSSGYVYTWGKGYC 352
             AL     V +W + YC
Sbjct: 725 WTALPMDRQVVSWYRAYC 742



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 6/186 (3%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V+  G NSS        ++ I  P+L  +      +Q+ AG   T  +   G VH CG 
Sbjct: 365 EVYVWGSNSSHQLAEGSMDK-ILVPKLATSFGSA--QQIEAGQYCTFVIFPDGFVHACGK 421

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            ++G+LG GD+ ++   K +    E  V SV        + LA+T +G VYS+G G    
Sbjct: 422 GSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGK 481

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG    +  P+ ++      + V  ++AG  H  A+   G +YTWG+G  G LGHGD 
Sbjct: 482 LGHGNSQTQKIPKLVEGALGNKV-VCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDN 540

Query: 361 IDKTLP 366
             + +P
Sbjct: 541 NSRNVP 546



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 6/134 (4%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  GSN+  QL  G ++D+     +A     GS  QI AG      +  +G V++ G 
Sbjct: 365 EVYVWGSNSSHQLAEG-SMDKILVPKLA--TSFGSAQQIEAGQYCTFVIFPDGFVHACGK 421

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCG 353
           GS   LG G+  ++ Q + +  F  + +     S+     H +AL   G VY+WG G  G
Sbjct: 422 GSYGRLGLGDSTNQTQLKRL-NFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYG 480

Query: 354 ALGHGDEIDKTLPE 367
            LGHG+   + +P+
Sbjct: 481 KLGHGNSQTQKIPK 494


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 385

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
             H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 444

Query: 225 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 503

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 504 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 561

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 562 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 593



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 15/220 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G
Sbjct: 272 VHQIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACG 330

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +  
Sbjct: 331 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 390

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+    
Sbjct: 391 LATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAIVEVM 448

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                  SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 449 NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSL 488



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 380 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 437

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 438 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 496

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 497 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 554

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G        S
Sbjct: 555 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGSN----FTS 608

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 609 SICIHKWVSG 618



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G+     +T +G V T      G+LGHG  +D   PK + 
Sbjct: 258 VLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVE 317

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + ++  +A G  +  AV+ +G ++++G G +    LGHG       P+ + +   +
Sbjct: 318 FL-ALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRV-SGPVE 375

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G+ V+ V+ G  H     ++G ++T+G G  G LGHGD    + P+ +  L       GL
Sbjct: 376 GLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML------SGL 429

Query: 382 SVLAEVC 388
             L   C
Sbjct: 430 KTLKVAC 436



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 14/141 (9%)

Query: 254 LDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +D   PK   PLE   V  V QIA G  ++  VT  G V+++   +   LGHG Q D  +
Sbjct: 256 IDVLIPK---PLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCR 312

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 369
           P+ ++      I  V  + G+ H  A+ +SG ++TWG G    G LGHG ++   +P+ +
Sbjct: 313 PKLVEFLALTNIDFV--ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRV 370

Query: 370 SSLKSHLAVQGLSVLAEVCPT 390
           S       V+GL VL+  C T
Sbjct: 371 SG-----PVEGLQVLSVACGT 386


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 7/255 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 358 GDEIDKTLPEPLSSL 372
               D+  P  +  L
Sbjct: 277 DSMNDEVNPRRVLEL 291



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS 370
             G LG G   +   P P+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK 342



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHVREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLK 373
           G E   +  P+ + SL+
Sbjct: 172 GKEFPSQASPQRVRSLE 188


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS-FTRINFP---- 160
           + +  G +H+ L ++S  +++ G    GVLGHG       P+  + +S F  I       
Sbjct: 366 LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIW 425

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A +V+V+   N     + S +++T GD      GH D   P   P+ V+AL      Q
Sbjct: 426 HSAAIVEVT---NQTGANVMSKKLYTWGDGDKNRLGHGD-KEPRLVPKCVQALLEYNFHQ 481

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G N T  L   G V T GS+++GQLG+  + D   P  +        V +I+ G S+
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDRLASELVEEISCGASH 540

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    VY++G G+N  LGHG+  D  +P  ++  + +  HV  +S G
Sbjct: 541 VTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDR--HVKSISCG 589



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 4/171 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SLS-LTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL 412


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 7/263 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I+      +  ++   
Sbjct: 17  ISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLV-ISALDDCEISSITCGA 75

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H     +S + V++ G       GH +++  +F PR ++ LKG+  KQ+  G +    +
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSS-DLFIPRAIKGLKGLEIKQIACGDSHCLAI 134

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G VH+ G N +GQLG G T D   P  +A  E + +V  +AAG  +  AVT +G +Y
Sbjct: 135 TGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGI-AVKMLAAGAEHTAAVTESGKLY 193

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G    LG G+++D L P  +     + +++  V+ G  H +A+ +SG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL--VACGWRHTIAVANSGNLYTFGWSK 251

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHGD  D  +P  + +LK+
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKN 274



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 134/321 (41%), Gaps = 60/321 (18%)

Query: 116 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           IT G  HT   S S+  V+S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  ITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRA-IKGLKGLEIKQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G+V + G N +   G   T   +  P  V A +G+  K + AG   T  +T 
Sbjct: 130 HCLAITGDGEVHSWGRNQNGQLGLGHT-EDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTE 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G   +G LG GD  DR  P  +A  P E++  V   A G  + +AV  +G +Y
Sbjct: 189 SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLV---ACGWRHTIAVANSGNLY 245

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV------------------------- 326
           +FG      LGHG+  D L P  +Q  + K I  V                         
Sbjct: 246 TFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFG 305

Query: 327 -------------------------RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                                    RV+ G  H VA+   G VY+WG+G  G LGHGD +
Sbjct: 306 QVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAV 365

Query: 362 DKTLPEPLSSLKSH-LAVQGL 381
           D+ +P+ +  L +  LA QG+
Sbjct: 366 DRCVPKRIELLSADGLACQGI 386



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 11/212 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VSA  +H   +L    V + G       GH D       P ++ AL       +T G
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALDDCEISSITCG 74

Query: 225 LNFTGFLTIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            + T   T R      V++ G    G+LGHG++ D   P++I  L+ +  + QIA G S+
Sbjct: 75  ADHT---TARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGL-EIKQIACGDSH 130

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+TG+G V+S+G   N  LG G   D L P  +  F  +GI V  ++AG EH  A+  
Sbjct: 131 CLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAF--EGIAVKMLAAGAEHTAAVTE 188

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SG +Y WG G  G LG GD  D+ +P  ++++
Sbjct: 189 SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAV 220



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ ++AG S+ +A+    +V S+G G +  LGHG+  +   P  I         +  ++ 
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISAL--DDCEISSITC 73

Query: 331 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +H  A  +S+  VY+WG G  G LGHG+  D  +P  +  LK
Sbjct: 74  GADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLK 117


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 10/253 (3%)

Query: 130 SVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           + F  GSS+ G LG    G +TTQ V+   +   S   V  +S  ++H   VL  G ++ 
Sbjct: 2   ATFCWGSSMEGQLGIGITGGQTTQEVA-KEVTTLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG NS    G    +R  ++P  V AL+ V  K V  G + T  ++ RG V   G N  G
Sbjct: 61  CGANSK---GQLGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRG 117

Query: 247 Q--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           Q  L  GD  ++P P+ +  L      V++  G  + +A+T +G ++S+G  +   LG G
Sbjct: 118 QCGLATGDIENKPRPRILKHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIG 176

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   R  +    +G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K 
Sbjct: 177 TLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKA 236

Query: 365 LPEPLSSLKSHLA 377
            P  L +++S + 
Sbjct: 237 YPTLLRNMRSQMV 249



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 20/285 (7%)

Query: 98  QSVEHSSDIVETSAGN--MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
           Q+ +  +  V T +G     I+ G++HT +++ + +++ CG++  G LG      + V  
Sbjct: 22  QTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQDRNQYKPVQV 81

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD---TNRPIFRPRLVE 211
           + +      HV   +  ++H   V   GQV   G N    CG       N+P  RPR+++
Sbjct: 82  SALETVVIKHV---ACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKP--RPRILK 136

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEE 267
            L      +V  G   +  LT  G + + G NT+GQLG G    +  DRPT   +  L  
Sbjct: 137 HLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPT--ELTSLRG 194

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           V  +V++A G  +  A+T +G V+ +G      LG G + ++  P  ++  R +   V  
Sbjct: 195 V-PLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQ--MVKH 251

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           ++ G +H   L + G V+ +G+G  G LGHG   ++  P  +  L
Sbjct: 252 IACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDL 296



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 9/249 (3%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 173
           +  G  HTL +S+   V   G +  G  G      +     RI    ++   V+V     
Sbjct: 92  VACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSL 151

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  + + G++F+ GDN+      G   TN    RP  + +L+GVP  +V  G   +  L
Sbjct: 152 HSMALTRDGRLFSWGDNTYGQLGIGTLVTNY-TDRPTELTSLRGVPLVRVACGGFHSFAL 210

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI G V   G N  GQLG G+  ++  P  +  +     V  IA G  +   +T +G V+
Sbjct: 211 TISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRS-QMVKHIACGQDHTAMLTADGGVF 269

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-SSGYVYTWGKG 350
            FG GS   LGHG  ++E+ PR +      G  + +V+ G  H + L+ S G +Y +G+G
Sbjct: 270 LFGQGSEGQLGHGSNYNEVNPRKVIDLM--GSDITQVTCGKHHTLVLEGSKGRLYAFGQG 327

Query: 351 YCGALGHGD 359
             G LG  +
Sbjct: 328 IHGQLGQDE 336



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 7/202 (3%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPC 218
           ++   V+V     H+  + + G++F+ GDN+      G   TN    RP  + +L+GVP 
Sbjct: 479 ASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNY-TDRPTELTSLRGVPL 537

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            +V  G   +  LTI G V   G N  GQLG G+  ++  P  +  +     V  IA G 
Sbjct: 538 VRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRS-QMVKHIACGQ 596

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +   +T +G V+ FG GS   LGHG  ++E+ PR +      G  + +V+ G  H + L
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLM--GSDITQVTCGKHHTLVL 654

Query: 339 D-SSGYVYTWGKGYCGALGHGD 359
           + S G +Y +G+G  G LG  +
Sbjct: 655 EGSKGRLYAFGQGIHGQLGQDE 676



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 42/296 (14%)

Query: 115 QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           Q+T G++HTL++  S   +++ G  + G LG   E   C +  R+  P   H    S++E
Sbjct: 303 QVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD-EARSCSNPQRVPGPWVPH----SSTE 357

Query: 173 NHAAFVLQSGQVFTC---------------GDNSSFCCGHRDTNRPIF------------ 205
            +++     G+V  C                D+       RD +  IF            
Sbjct: 358 KNSS---SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXX 414

Query: 206 --RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKS 261
                    L+ V  K V  G + T  ++ R  V   G N  GQ  L  GD  ++P P+ 
Sbjct: 415 XXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRI 474

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L      V++  G  + +A+T +G ++S+G  +   LG G        R  +    +
Sbjct: 475 LRHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLR 533

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K+ P  L +++S + 
Sbjct: 534 GVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMV 589



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 14/215 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD---TNRPIFRPRLVEALKGVPCKQV 221
           +  V+  ++H   V    QV   G N    CG       N+P  RPR++  L      +V
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKP--RPRILRHLASYQFVKV 486

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEEVGSVVQIAAG 277
             G   +  LT  G + + G NT+GQLG G    +  DRPT   +  L  V  +V++A G
Sbjct: 487 CCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPT--ELTSLRGV-PLVRVACG 543

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  A+T +G V+ +G      LG G + ++  P  ++  R +   V  ++ G +H   
Sbjct: 544 GFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQ--MVKHIACGQDHTAM 601

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           L + G V+ +G+G  G LGHG   ++  P  +  L
Sbjct: 602 LTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDL 636



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H+  ++ S SVF  G +  G LG G +  +       N  S   V  ++  +
Sbjct: 538 VRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQM-VKHIACGQ 596

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A +   G VF  G  S    GH  +N     PR V  L G    QVT G + T  L 
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGH-GSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLE 655

Query: 233 -IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             +G ++  G   HGQLG  +      P+ +
Sbjct: 656 GSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 135/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 1318 VYACGEATNGRLGLG-LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSW 1376

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 1377 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1435

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  +G  VVQ+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 1436 LGHGDTTTQLKPKMVKVL--LGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1493

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 1494 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 1551

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 1552 KPQVVEGLRGKKIVHVAVGALHCLA 1576



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1361 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1419

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH DT   + +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1420 TSSGELYTWGLGEYGRLGHGDTTTQL-KPKMVKVLLGHRVVQVACGSRDAQTLALTDEGL 1478

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1479 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 1537

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 1538 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 1595

Query: 357  HG 358
            +G
Sbjct: 1596 NG 1597



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 6/215 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 2408

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVGIACGSGDAQTLC 2467

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VVRV  G +  VAL  +G 
Sbjct: 2468 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVRVECGSQFSVALTKAGA 2525

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            VYTWGKG    LGHG +     P  +  L+   A+
Sbjct: 2526 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAI 2560



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 18/268 (6%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2338 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-SRSPCDRPR 2391

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 2392 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 2450

Query: 216  -----VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
                 + C    +G   T  LT    V + G   +G+LG G +     P  I  L  +G 
Sbjct: 2451 HRVVGIACG---SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG- 2506

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            VV++  G  + +A+T  G VY++G G    LGHG      +PR +Q    +G   + ++ 
Sbjct: 2507 VVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKAIAIAT 2564

Query: 331  GDEHVVALDSSGYVYTWGKGYCGALGHG 358
            G  H V     G VYTWG    G LG G
Sbjct: 2565 GSLHCVCCTEDGEVYTWGDNDEGQLGDG 2592



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 4/175 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
            P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ +  L
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTAL 1347

Query: 266  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
               V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 1348 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 1407

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
               ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  VQ
Sbjct: 1408 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQ 1460



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1295 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKK 1354

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1355 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1413

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1414 SHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLL--GHRVVQVACGSRDAQTL 1471

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 1472 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 1507



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 4/214 (1%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 2291 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKK 2349

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG       P+ I  L  +  VV +AAG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGI-EVVDVAAGG 2408

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCL 2468

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 V++WG G  G LG G      +P  + SL
Sbjct: 2469 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 2502



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1409 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQ-LKPKMVKVLLGHRVVQVACGSRD 1467

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1468 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 1526

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 1527 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 1585

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 1586 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 1628



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 2315

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2316 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2375

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG       P  + SL+
Sbjct: 2376 DGKLGHGSRSPCDRPRVIESLR 2397



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2460 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVRVECGSQFSV 2518

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + ++G V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2519 ALTKAGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGE 2577

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 2578 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 2623



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 1469 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 1527

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 1528 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 1586

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 1587 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 1630


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N TG   +   ++T G     +LGHGD   R  PK +  L E     Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-DFHQLACGHNMT 489

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS-FTRINFP---- 160
           + +  G +H+ L ++S  +++ G    GVLGHG       P+  + +S F  I       
Sbjct: 366 LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIW 425

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A +V+V+   N     + S +++T GD      GH D   P   P+ V+AL      Q
Sbjct: 426 HSAAIVEVT---NQTGANVMSKKLYTWGDGDKNRLGHGD-KEPRLVPKCVQALLEYDFHQ 481

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G N T  L   G V T GS+++GQLG+  + D   P  +        V +I+ G S+
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDRLASELVEEISCGASH 540

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    VY++G G+N  LGHG+  D  +P  ++  + +  HV  +S G
Sbjct: 541 VTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDR--HVKSISCG 589



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 4/171 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SLS-LTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL 412


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3014 VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3073 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3190 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4255



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LG G +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LG G E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQ 708



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGTRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSL 4196



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGTRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLR 4091



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G      V   +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPM-KIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 12/171 (7%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            + + GQV++ G  DN     G   T   +  P+L+E L+G     V AG      LT  
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGLG---TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED 728

Query: 235 GHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 729 SEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3014 VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3073 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3190 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4255



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4196



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLR 4091



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 144/341 (42%), Gaps = 51/341 (14%)

Query: 82  LLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCG 140
            LN  +GN  +  + +     S D V   A    I TG  HTL +++   V+SCGS+  G
Sbjct: 43  FLNGDDGNIVKTPQVVVGAPTSHDGVSVRA----IATGERHTLFLADDGKVWSCGSNENG 98

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS-------- 192
            LG G       +   +      ++VQ++A   H   V   G++F  G NS         
Sbjct: 99  ELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSN 158

Query: 193 -----------------------------------FCCGHRDTNRPIFRPRLVEALKGVP 217
                                              F  G +   R ++ P+ +E    +P
Sbjct: 159 ITSTDIPKRVVSLTETVQVACGTDHTIAIVESGRIFVWGLQPDGRVLYAPKEIEFFMALP 218

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             QV AG ++   LT+ G +   GSN +GQLG  D  +R TP  +  L  + +VV +A G
Sbjct: 219 VVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSL-NVVHVACG 277

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ +A+T  G ++  GS S   LG G +    Q   +      G HV RV+ G  H +A
Sbjct: 278 HSHTVALTHEGRLFVCGSDSCGQLGSGRKVPS-QNTMLAVTEMLGTHVTRVACGRCHTLA 336

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           L + G +Y +G    G LG G+   +  P P+ +L   ++V
Sbjct: 337 L-AGGKMYAFGLNSSGQLGSGNVRSQVTPRPIDALTDVVSV 376



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 20/178 (11%)

Query: 217 PCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGH--------GDTLDRPTPKSIAPL 265
           P  ++ + +  TG      +R  ++  G    GQLG+        G+ +  P     AP 
Sbjct: 4   PVHRIISAVKETGIGRRRMVRRQLYAFGYGGDGQLGNRGFLNGDDGNIVKTPQVVVGAPT 63

Query: 266 EEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRK 321
              G SV  IA G  + L +  +G V+S GS  N  LG G   E    + P  +      
Sbjct: 64  SHDGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLS----G 119

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAV 378
           G+++V+++AG  H +A+   G ++ WG    G L     I  T +P+ + SL   + V
Sbjct: 120 GVNIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTETVQV 177


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3246

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3247 RKPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4255



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4196



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLR 4091



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  G N 
Sbjct: 3228 WTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3286

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3080 VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3138

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3139 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3198 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3255

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3256 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3313

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3314 KPQVVEGLRGKKIVHVAVGALHCLA 3338



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4098 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4151

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4152 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4210

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4211 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4269

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4270 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4327

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4328 HCVCCTEDGEVYTWGDNDEGQLGDG 4352



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3123 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3181

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3182 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3240

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3299

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3300 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3357

Query: 357  HG 358
            +G
Sbjct: 3358 NG 3359



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4168

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4227

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4285

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4321



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 561 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 616

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 617 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 671

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 672 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 730

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 731 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 788

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 789 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 821



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGK 616

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 617 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 675

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 676 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 733

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 734 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 776



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3085

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3086 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3145

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3146 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3203

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3204 TTQLKPKMVKVLLGHRVIQ 3222



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 3057 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3114

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3115 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3173

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3174 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3231

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3232 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3269



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 570

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 630

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 631 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 688

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 689 VTENGQVWSWGDGDYGKLGRG 709



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4096 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4155

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4156 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4214

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4262



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3171 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3229

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3230 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3288

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3289 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3347

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3390



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4075

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4076 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4135

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4136 DGKLGHGNRSPCDRPRVIESLR 4157



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4278

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4279 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4337

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4338 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4383



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 681 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 739

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 740 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 798

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 799 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 844



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3231 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3289

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3290 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3348

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3349 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3392



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 571

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 572 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 618


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
           V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 49  VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 107

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 108 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 166

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 167 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 224

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                  P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 225 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 282

Query: 365 LPEPLSSLKS----HLAVQGLSVLA 385
            P+ +  L+     H+AV  L  LA
Sbjct: 283 KPQVVEGLRGKKIVHVAVGALHCLA 307



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 1067 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAKDGKLGHG-NRSPCDRPR 1120

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 1121 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 1179

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 1180 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1238

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1239 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1296

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 1297 HCVCCTEDGEVYTWGDNDEGQLGDG 1321



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 92  GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 150

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 151 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 209

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 210 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 268

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 269 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 326

Query: 357 HG 358
           +G
Sbjct: 327 NG 328



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1079 VAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1137

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 1138 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 1196

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1197 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1254

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 1255 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 1290



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 4/175 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
           P   E L  +   QV  G      +T+ G V++CG  T+G+LG G  +   P P+ I  L
Sbjct: 19  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITAL 78

Query: 266 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 79  SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 138

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +Q
Sbjct: 139 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 191



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 26  SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 83

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 84  KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 142

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 143 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 200

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 201 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 238



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1065 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIES 1124

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1125 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 1183

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 1184 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 1231



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 140 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 198

Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 199 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 258 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 316

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 317 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 359



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1044

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1045 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAK 1104

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 1105 DGKLGHGNRSPCDRPRVIESLR 1126



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1189 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1247

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1248 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1306

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1307 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1352



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 200 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 258

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 259 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 317

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 318 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 361


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 24/288 (8%)

Query: 106 IVETSAG-NMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           +++T AG N+++   G  HT  ++ S     +  G+  CG+LGHG E +  +        
Sbjct: 343 LIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDM 402

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              HV  VS    H A V   GQ+FT GD +    GH D +     PR VE L+G+   +
Sbjct: 403 EGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATV-PREVETLRGLRTIR 461

Query: 221 VTAGLNFTG---------------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           V+ G+  T                  +  G + T G+    +LGHGD   R  P+ +  L
Sbjct: 462 VSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVAL 521

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            +  ++ Q+A G +  LA+T  G VY+ GS S   LG+     ++   AI   +  G  +
Sbjct: 522 GDE-NICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATGKVP--AIVEGKIAGKII 578

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  +  L+
Sbjct: 579 EEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLR 626



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 20/211 (9%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P+L++ L G+  + V  G N T  +T 
Sbjct: 309 HAVLVTKPGEIFSWGEESGGRLGH-GIKADVPNPKLIDTLAGMNIELVACGENHTCAVTF 367

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   +  G LGHG       PK I    E   V  ++ GP +  AVT  G ++
Sbjct: 368 SGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLF 427

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------------- 337
           +FG G+   LGHG+      PR ++T R  G+  +RVS G  H  A              
Sbjct: 428 TFGDGTFGALGHGDHSSATVPREVETLR--GLRTIRVSCGVWHTAAAVEITTESSSPGGS 485

Query: 338 -LDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
              + G ++TWG G    LGHGD+  +  PE
Sbjct: 486 GSSTFGKLFTWGNGDEYRLGHGDKEPRLFPE 516



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 4/171 (2%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+ +E+   +    +  G      +T  G + + G  + G+LGHG   D P PK I  
Sbjct: 287 FLPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDT 346

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 322
           L  + ++  +A G ++  AVT +G +Y++G G+  C  LGHG +     P+ I     +G
Sbjct: 347 LAGM-NIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGG-DMEG 404

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           IHV  VS G  H  A+ S G ++T+G G  GALGHGD    T+P  + +L+
Sbjct: 405 IHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLR 455



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 113/251 (45%), Gaps = 31/251 (12%)

Query: 101 EHSSDIVETSAGNMQ------ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVS 153
           E S  I +   G+M+      ++ G +HT  +++   +F+ G    G LGHG  ++  V 
Sbjct: 389 EASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVP 448

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQ---------------SGQVFTCGDNSSFCCGHR 198
              +        ++VS    H A  ++                G++FT G+   +  GH 
Sbjct: 449 -REVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHG 507

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           D    +F P  V AL      QV  G N T  LT  G V+T GS ++GQLG+     R T
Sbjct: 508 DKEPRLF-PECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGN----PRAT 562

Query: 259 PKSIAPLEE--VGSVVQIAAGPSYMLAV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            K  A +E    G +++  A  SY +AV T    VY++G G+N  LGHG+  D  QP  +
Sbjct: 563 GKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVV 622

Query: 316 QTFRRKGIHVV 326
              R K +  V
Sbjct: 623 DFLRDKQVRAV 633


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 8/270 (2%)

Query: 101 EHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-I 157
           +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T +C+   R I
Sbjct: 22  QEREQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL-PGTEECIRVPRNI 80

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
              S   +VQVS    H+  + +  +VF+ G N     G     +    P+L+++L G+P
Sbjct: 81  KSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIP 140

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G
Sbjct: 141 FMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCG 199

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A
Sbjct: 200 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSA 257

Query: 338 -LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            + SSG +Y++G G  G LG G   ++  P
Sbjct: 258 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 287



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 4/220 (1%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            A ++V VS  + H   +   GQV+  G ++    G   T   I  PR +++L  +   Q
Sbjct: 31  DAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQ 90

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  L+    V + G N +GQLG G    + T P+ I  L  +   +QIAAG +
Sbjct: 91  VSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGI-PFMQIAAGGA 149

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +   +T +G ++ +G      LG  +++D   P  +++ R + I  V +  G++H  AL 
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALT 207

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G V+T+G G  G LGH     +  P  +  L   +  Q
Sbjct: 208 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 247



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S  S VFS G +  G LG G E  +  S   I        +Q++A  
Sbjct: 89  VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGG 148

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 149 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 207

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 208 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 265

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 266 YSFGLGGNGQLGTGSTSNRKSPFTVK 291



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 5/171 (2%)

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEV 268
           V AL       V+ G   T  L  +G V+  G +T GQLG   T +    P++I  L ++
Sbjct: 27  VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDI 86

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVR 327
             +VQ++ G  + LA++    V+S+G      LG G E   +  P+ I++    GI  ++
Sbjct: 87  -QIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLL--GIPFMQ 143

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           ++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 144 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 194


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3019 VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3077

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3078 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3137 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3194

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3195 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3252

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3253 KPQVVEGLRGKKIVHVAVGALHCLA 3277



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4037 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4090

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4091 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4149

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4150 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4208

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4209 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4266

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4267 HCVCCTEDGEVYTWGDNDEGQLGDG 4291



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3062 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3120

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3121 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3179

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3238

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3239 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3296

Query: 357  HG 358
            +G
Sbjct: 3297 NG 3298



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4049 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4107

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4108 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4166

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4167 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4224

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4225 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4260



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 498 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 553

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 554 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 608

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 609 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 667

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 668 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 725

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 726 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 758



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGK 553

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 554 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 612

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 613 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 670

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 671 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 713



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3024

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3025 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3084

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3085 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3142

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3143 TTQLKPKMVKVLLGHRVIQ 3161



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2996 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3053

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3054 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3112

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3113 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3170

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3171 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3208



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 507

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 625

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 626 VTENGQVWSWGDGDYGKLGRG 646



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4035 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4094

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4095 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4153

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4154 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4201



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3110 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3168

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3169 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3227

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3228 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3286

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3329



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4014

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4015 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4074

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4075 DGKLGHGNRSPCDRPRVIESLR 4096



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4159 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4217

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4218 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4276

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4277 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4322



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 618 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 676

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 677 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 735

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 736 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 781



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3170 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3228

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3229 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3287

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3288 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3331



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 508

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 509 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 555


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS-FTRINFP---- 160
           + +  G +H+ L ++S  +++ G    GVLGHG       P+  + +S F  I       
Sbjct: 366 LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIW 425

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A +V+V+   N     + S +++T GD      GH D   P   P+ V+AL      Q
Sbjct: 426 HSAAIVEVT---NQTGANVMSKKLYTWGDGDKNRLGHGD-KEPRLVPKCVQALLEYNFHQ 481

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G N T  L   G V T GS+++GQLG+  + D   P  +        V +I+ G S+
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDRLASELVEEISCGASH 540

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    VY++G G+N  LGHG+  D  +P  ++  + +  HV  +S G
Sbjct: 541 VTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDR--HVKSISCG 589



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 4/171 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SLS-LTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL 412


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 130/293 (44%), Gaps = 23/293 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  +   
Sbjct: 330 VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G
Sbjct: 390 VGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRG 448

Query: 216 VPCKQVTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPK 260
           +   +V  G+  T         L+  G         ++T G    G+LGHGD   R  P+
Sbjct: 449 LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +A L E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++    
Sbjct: 509 CVAALIEE-RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIA 566

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
               V  V+ G  HV  L S   VYTWGKG  G LGHGD   +  P  +  LK
Sbjct: 567 NSF-VEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLK 618



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 20/216 (9%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    P+ +    E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 338
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 339 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              SS  +YTWG G  G LGHGD   + +PE +++L
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ +   + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGG-QMEGIR 398

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLR 447



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 19/238 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----------ETTQCVSFTRIN---FPS 161
           I+ G +HT +++++  +F+ G    G LGHG           ET + +  T++    + +
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 162 AAHVVQVSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           AA V  ++  S++  +    S +++T GD      GH D N P   P  V AL      Q
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD-NEPRLVPECVAALIEERICQ 520

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V  G + T  LT  G V+T GS  +GQLG   T +   P  +        V ++A G  +
Sbjct: 521 VACGNDLTVALTTAGRVYTMGSTAYGQLGSA-TANGKLPTCVEGEIANSFVEEVACGSYH 579

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  +T    VY++G G N  LGHG+ +    P  +   + K   V  V+ G +  V +
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDK--QVKNVACGSKFTVVI 635



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 5/118 (4%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           LD   PK++     V  V  IA G  + + VT  G ++S+G  S   LGHG + D   P+
Sbjct: 276 LDALLPKALESTV-VLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPK 334

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 369
            I T    G +V  V+ G+ H  A+  SG +YTWG G    G LGHG E+   +P+ +
Sbjct: 335 IIDTL--SGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV 390


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 2957 VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3015

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3016 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3075 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3132

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3133 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3190

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3191 KPQVVEGLRGKKIVHVAVGALHCLA 3215



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3975 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4028

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4029 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4087

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4088 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4146

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4147 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4204

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4205 HCVCCTEDGEVYTWGDNDEGQLGDG 4229



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3058

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3176

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234

Query: 357  HG 358
            +G
Sbjct: 3235 NG 3236



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4045

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4046 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4104

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4105 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4162

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4163 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4198



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 438 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 493

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 494 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 548

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 549 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 607

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 608 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 665

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 666 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 698



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 493

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 494 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 552

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 553 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 610

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 653



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2963 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3022

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3023 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3080

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3081 TTQLKPKMVKVLLGHRVIQ 3099



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2934 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2991

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2992 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3050

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3108

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3109 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3146



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 447

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 566 VTENGQVWSWGDGDYGKLGRG 586



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4032

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4033 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4091

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4139



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3106

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3166 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3224

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3267



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3952

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4012

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLR 4034



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4097 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4155

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4156 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4214

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4215 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4260



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 616

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 721



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3108 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3166

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3167 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3226 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3269



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 448

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 449 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 495


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 13/266 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H   + E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 91  HERSVKEVACG------GNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSKP---EQIGALA 141

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H++ V+  E+H+  +   G++F+ G  S    G   T   +  PRL++ L      QV
Sbjct: 142 DQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQV 201

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G     G N+HGQLG G     + +P+ +  L+ +  + Q+AAG ++
Sbjct: 202 SCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGI-PLAQVAAGGAH 260

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  ++  LG  ++ D   P  ++  R +   VV +S G +H   L  
Sbjct: 261 SFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQ--KVVYISCGSDHTAVLTK 318

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           +G V+T+G G CG LGH    D+  P
Sbjct: 319 TGGVFTFGAGSCGQLGHDSFNDEVNP 344



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 132/280 (47%), Gaps = 12/280 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 146 IHVACGESHSLALSDQGRLFSWGAGSDGQLGLT-TTEDSVAVPRLIKKLNQEMILQVSCG 204

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ F  G NS    G          P+ V++L G+P  QV AG   +  L
Sbjct: 205 NWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL 264

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G NT GQLG  D  DR +P  +  L     VV I+ G  +   +T  G V+
Sbjct: 265 SLSGAVFGWGKNTSGQLGLSDEQDRESPCHVK-LLRTQKVVYISCGSDHTAVLTKTGGVF 323

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A   SSG +Y +G G
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG 381

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV--QGLSVLAEVC 388
             G LG G   +   P P   +K H A   + +S  A+ C
Sbjct: 382 IKGQLGSGHTCNLKCPSP---VKGHWAAHNEPVSRRADAC 418



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 8/216 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL       V  G
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS---KPEQIGALADQHIIHVACG 151

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + +  L+ +G + + G+ + GQLG   T D    P+ I  L +   ++Q++ G  + LA
Sbjct: 152 ESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQ-EMILQVSCGNWHCLA 210

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +  +G  +++G  S+  LG G++   +  P+ +++    GI + +V+AG  H  AL  SG
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLSG 268

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V+ WGK   G LG  DE D+  P  +  L++   V
Sbjct: 269 AVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVV 304



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 18/209 (8%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGF 230
           EN     L+  ++   G  S    G   T +PI   PR    +     K+V  G N + F
Sbjct: 48  ENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIF 107

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVT 285
           L   G V+TCG NT GQLGH     +P        E++G+     ++ +A G S+ LA++
Sbjct: 108 LLEDGEVYTCGVNTKGQLGHEKEGSKP--------EQIGALADQHIIHVACGESHSLALS 159

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+ H +AL + G  
Sbjct: 160 DQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI--LQVSCGNWHCLALAADGQF 217

Query: 345 YTWGKGYCGALGHGDEI-DKTLPEPLSSL 372
           + WG+   G LG G E   +  P+ + SL
Sbjct: 218 FAWGQNSHGQLGLGKEFPSQASPQRVKSL 246


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +CV   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECVRVPRNIRSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRS-QKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A   SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECVRVPRNIRSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +++AG  H   L  SG ++ WG+   G LG  D+ D+ +P  L S
Sbjct: 181 PQMIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKVV 245



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   +  PR + +L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRSQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSVVTQ 298



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRSQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GSVV QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  +   +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G++V++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVP 276

Query: 367 EPLSSLKSHLA 377
             +++ K  ++
Sbjct: 277 TLINTEKERMS 287



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 14/238 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           TG +  +  ++  VFS G +    LG+G  T                V++V+   +H   
Sbjct: 83  TGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+P  R R+   L+      +  G   +  +   G 
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIACGQLCSMAVLDSGE 201

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++  G N +GQLG G+  ++ TP  IA L+ V +V+Q+A G ++ +A+T  G VYS+G+ 
Sbjct: 202 IYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NVIQVACGYAHTIALTDEGFVYSWGAN 260

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           S   LG G + ++  P  I T + +       H    SA      A   SG V  WG+
Sbjct: 261 SYGQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTSA------AKTQSGQVLMWGQ 312



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP   +A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVAIA-TAD 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+S+G      LG+G     L P  + T    G  V+ V+ G  H +AL + G V+ W
Sbjct: 94  GEVFSWGHNGYSQLGNGTSTHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS 371
           G    G +G G   ++  P  +SS
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSS 176



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +HT+ L ++  VF+ G +  G +G G    Q       +      VV ++  +
Sbjct: 131 IEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  VL SG+++  G N   C G      N     P  + AL+GV   QV  G   T  
Sbjct: 191 LCSMAVLDSGEIYGWGYN---CNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIA 247

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G+N++GQLG G+  ++  P  I   +E  S V          A T +G V
Sbjct: 248 LTDEGFVYSWGANSYGQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTSAAKTQSGQV 307

Query: 291 YSFG 294
             +G
Sbjct: 308 LMWG 311



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 4/114 (3%)

Query: 261 SIAPLEEVGSVVQ---IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           ++ P EE+  + Q     +  +  L VT N  V++ G+  + CLG G+    ++PR I  
Sbjct: 11  ALLPPEELKLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDV 70

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
              K I  +    G  HV    + G V++WG      LG+G       P  +S+
Sbjct: 71  LCGKKIVSLSYGTG-PHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVST 123


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 11/268 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-AS 171
           M +T G+Y T  ++SN +V + G    G LG+G   +       I FP+    +  S  S
Sbjct: 164 MSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPIL-IEFPAPVRKILTSKGS 222

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  + ++GQ++T GD      GH D+      P+L+EAL          G   +  +
Sbjct: 223 DGHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQK-SPKLIEALASRVIVDADCGHRHSAAV 281

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
              GH++  G   +G+LG GD L R  P  +  + E     Q+  G ++ + ++ +G  V
Sbjct: 282 CDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREAS---QVVCGFNHTVVLSTDGRTV 338

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG+  N  LGHG+ + + +P+ I     +G+ + +++AG +   A+   G +Y WG G
Sbjct: 339 WSFGAAENGKLGHGDTNRQFRPKIIDAL--QGLTITQIAAGTQISAAVTREGALYVWGFG 396

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            C   G  DE    LP+ +  L   + +
Sbjct: 397 PCLGNGSSDET-FMLPKVVRGLSGRVVI 423



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 147/323 (45%), Gaps = 31/323 (9%)

Query: 48  LYPQK---FRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSS 104
           LYP+    +  ++ + A Q C    +  G        ++    G++ R+     +   S 
Sbjct: 152 LYPRNLSVYGKVMSMTAGQYCTFAVLSNGT-------VMANGKGSYGRLGNGASASSSSP 204

Query: 105 DIVETSAGNMQITTGRY---HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
            ++E  A   +I T +    H++ I  N  +++ G    G LGHG  TTQ  S   I   
Sbjct: 205 ILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQ-KSPKLIEAL 263

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVP 217
           ++  +V       H+A V  +G ++  G+      G  D    + P+  P + EA     
Sbjct: 264 ASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREA----- 318

Query: 218 CKQVTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             QV  G N T  L+  G  V + G+  +G+LGHGDT  +  PK I  L+ + ++ QIAA
Sbjct: 319 -SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGL-TITQIAA 376

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHV 335
           G     AVT  G +Y +G G   CLG+G   +    P+ ++     G  V+ ++ G+ HV
Sbjct: 377 GTQISAAVTREGALYVWGFGP--CLGNGSSDETFMLPKVVRGL--SGRVVIDIAVGENHV 432

Query: 336 VALDSSGYVYTWGKGYCGALGHG 358
           VAL   G V+TWG    G  G G
Sbjct: 433 VALTKDGLVFTWGNNQNGQCGTG 455



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 4/191 (2%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G NSS           +  PR +     V    +TAG   T  +   G V   G 
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKV--MSMTAGQYCTFAVLSNGTVMANGK 187

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            ++G+LG+G +    +P  I     V  ++       + +A+  NG ++++G G    LG
Sbjct: 188 GSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKLG 247

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG+   +  P+ I+    + I  V    G  H  A+  +G++Y WG+G  G LG GD + 
Sbjct: 248 HGDSTTQKSPKLIEALASRVI--VDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ 305

Query: 363 KTLPEPLSSLK 373
           +++P  +  ++
Sbjct: 306 RSVPVQVPDIR 316



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 7/145 (4%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   GSN+  QL    T   P  K + P  L   G V+ + AG     AV  NG V + 
Sbjct: 130 EVFCWGSNSSQQL----TDATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVLSNGTVMAN 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G GS   LG+G       P  I+ F      ++     D H +A+  +G ++TWG G  G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYG 244

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAV 378
            LGHGD   +  P+ + +L S + V
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIV 269



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           DI E S    Q+  G  HT+++S    +V+S G++  G LGHG +T +      I+    
Sbjct: 314 DIREAS----QVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG-DTNRQFRPKIIDALQG 368

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             + Q++A    +A V + G ++  G     C G+  ++     P++V  L G     + 
Sbjct: 369 LTITQIAAGTQISAAVTREGALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIA 426

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYM 281
            G N    LT  G V T G+N +GQ G G  +   T P+ +  L   G + Q+ AG ++ 
Sbjct: 427 VGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAG-IQQVTAGTTHT 485

Query: 282 L 282
            
Sbjct: 486 F 486


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V   G+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGY 351
           G      +G G+  D   P+ I      G H  VV+VS G  H VA+     VY+WG+G 
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLISI---PGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGT 347

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHGD +D++ P+ + +L +
Sbjct: 348 SGQLGHGDAVDRSAPKGIQALSA 370



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 7/259 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   +H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRI-IGALNDCEISLVACGADH 68

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +T 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSS-DLFVPHPIKALQGLEIRQIACGDSHCLAVTA 127

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT  G +Y +
Sbjct: 128 DGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDGGKLYGW 186

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G    G
Sbjct: 187 GWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSKYG 244

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGHGD  D  LP  +++L
Sbjct: 245 QLGHGDYADHLLPHQVAAL 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  +++   ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 10/164 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDC-EISLVACGADH 68

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           + G VY+WG+   G LG GD  D  +P  L      LA +G+SV
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKL------LAFEGVSV 164



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ ++AG S+ +A+    VV SFG G +  LGHG+  D   PR I         +  V+ 
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALND--CEISLVAC 64

Query: 331 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G +H  A  ++   +Y+WG G  G LGHG+  D  +P P+ +L      QGL +    C
Sbjct: 65  GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL------QGLEIRQIAC 117


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 134/305 (43%), Gaps = 28/305 (9%)

Query: 79  QIELLNRCNGNWKRV---LRFLQSVEHSSDIVETSAGNMQITT---GRYHTLLISNSSVF 132
           ++     C+G  K +    R  ++V    ++  T+    ++ T   G+ H   ++ S V 
Sbjct: 228 EVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVL 287

Query: 133 -SCGSSLCGVLGHGP---------------ETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            S G+   G LG GP                        R+          V+    H  
Sbjct: 288 LSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTL 347

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +  +G+VF+ G  +    GH D  N  +  PRLV+AL GV   Q+ AG N +  L+  G
Sbjct: 348 ALTANGRVFSFGRGAFGALGHGDRLNCDV--PRLVDALWGVGVAQIAAGDNHSASLSASG 405

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTG--NGVVYS 292
            V+T G   +G LGH D  +R  P  +  L++ G    QIA G  + LA+ G  +GV+ +
Sbjct: 406 RVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLA 465

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G GS+   G G   D L P  I         V ++SAG +H VA+   G VYTWG    
Sbjct: 466 WGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQ 525

Query: 353 GALGH 357
           G LGH
Sbjct: 526 GQLGH 530



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 106/229 (46%), Gaps = 24/229 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVP-CK 219
           V  V+    H+  V  +G+V+  GD S    +     R     I  P +      +P   
Sbjct: 210 VTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVA 269

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD------------RPTPKSIAPLEE 267
            V  G      +T  G + + G+   GQLG G   D            R    S+ P   
Sbjct: 270 TVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP-RL 328

Query: 268 VGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           VGS       +A G  + LA+T NG V+SFG G+   LGHG++ +   PR +      G+
Sbjct: 329 VGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDAL--WGV 386

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V +++AGD H  +L +SG VYTWG+G  GALGH D  +++ P P+ +L
Sbjct: 387 GVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQAL 435


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 115/250 (46%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 306 TPVTVEKDRI 315



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 4/192 (2%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           PIF     E L+ +    V  G  N   + T+   +   G+N  G LG GD      P+ 
Sbjct: 37  PIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 96

Query: 262 IAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T   
Sbjct: 97  LDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NL 154

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
               V+ V+ G  H + L S G V+ WG    G +G G  +++  P  ++    +  V  
Sbjct: 155 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT 214

Query: 381 LSVLAEVCPTIV 392
           ++     C  +V
Sbjct: 215 IACGQMCCMAVV 226


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 127/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L ++G VV+
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG 4289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 120/238 (50%), Gaps = 22/238 (9%)

Query: 145 GPETTQCVSFTRINFPSAAHVVQVSA-SENHAAFVLQS-GQVFT--CGDNSSFCCGHRDT 200
           GP+  Q ++        + ++V+++A S+ H    L + G+VF+  CGD      GH DT
Sbjct: 484 GPQLVQSLA--------SRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRL--GHGDT 533

Query: 201 NRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
             P+  P+L+ AL G    +    +  G  ++  +T  G ++T G   +G+LGHG + D+
Sbjct: 534 -VPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQ 592

Query: 257 PTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             P  +  L+ +  + V   +G +  LAVT NG V+S+G G    LG G       P+ I
Sbjct: 593 TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +    + + +V+V  G +  +AL   G VYTWGKG    LGHG E     P+ L  LK
Sbjct: 653 EKL--QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLK 708



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+    +S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  +V+
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 753



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G++F+
Sbjct: 3016 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV 3249

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3250 RKPQVVEGLRGKKIVHVAVGALHCLA 3275



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G  VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4258



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQ 3159



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3206



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG               + ++
Sbjct: 3914 MADNENMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG--------------SGTI 3959

Query: 132  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            +  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  +
Sbjct: 3960 YGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+LG
Sbjct: 4019 GGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            HG+      P+ I  L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+
Sbjct: 4078 HGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQ 4136

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196

Query: 370  SSL 372
             SL
Sbjct: 4197 DSL 4199



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4098

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++AG  H   + ++G ++TWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 4099 VDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLR 4094



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTDLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3178 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3237 DYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3295

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3296 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQA 550


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +P LVEAL       V  G
Sbjct: 344 VLQIACGVKHAALVTRQGEMFTWGEESGGRLGH-GVGKNVVQPCLVEALASSTVDFVACG 402

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 403 EFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVAFVTCGPWHT 461

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++ +   PR +++    G+  V V+ G  H  A+   
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESL--SGLRTVSVACGVWHTAAIVEV 519

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    SSG ++TWG G    LGHGD+  +  P  +S+L
Sbjct: 520 IVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISAL 561



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 125/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 399 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVAFVTCG 457

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    I  PR VE+L G+    V  G+  T  +
Sbjct: 458 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-ISYPREVESLSGLRTVSVACGVWHTAAI 516

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  I+ L +  +  +IA G S 
Sbjct: 517 VEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDY-NFHRIACGHSL 575

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 576 TVGLTTSGRVFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGECVEEIACGAYHVTVLTS 633

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 634 RNEVYTWGKGANGRLGHGDVEDRKTPTLVEALK 666



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI S   +F+ G    GVLGHG    + +S+ R +   S    V V+    
Sbjct: 454 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENISYPREVESLSGLRTVSVACGVW 511

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D +  +  P  + AL      ++ 
Sbjct: 512 HTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL-EPTCISALIDYNFHRIA 570

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +        V +IA G  ++ 
Sbjct: 571 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKLAGECVEEIACGAYHVT 629

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 630 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAI 683



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 11/216 (5%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N S+C    D    I  P+ +E+   +   Q+  G+     +T +G + T G  + G+LG
Sbjct: 320 NVSYCSPRTD----ILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLG 375

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   +   P  +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 376 HGVGKNVVQPCLVEALAS-STVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDV 434

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP- 366
               P+ I     +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P 
Sbjct: 435 SHWIPKRI-AGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPR 493

Query: 367 --EPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
             E LS L++     G+   A +   IV + + S S
Sbjct: 494 EVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASIS 529


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 128/268 (47%), Gaps = 7/268 (2%)

Query: 108 ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           E   G   ++ G  H++ ++S   V S G    G LGHG +  +C++   I+  + A + 
Sbjct: 10  EEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHG-QADECLAPKAISTLTDAGIE 68

Query: 167 QV-SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V   +E   A     GQV++ G       GH D N  +F PR +E   G P  +V  G 
Sbjct: 69  SVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCN-DVFVPRPIEFFSGRPVHRVACGD 127

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  +   G + T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGE-RVRSVACGSEHSLAAT 186

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+S+G G    LG GE  D   P  +     +GI +V    G  H   +   G V+
Sbjct: 187 ESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGL--EGIRMVSAECGWRHSAVVSEDGRVF 244

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           T+G    G LGHGD  D+T+P  +++L+
Sbjct: 245 TFGWSKYGQLGHGDHTDRTVPCQVAALR 272



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 117/260 (45%), Gaps = 7/260 (2%)

Query: 109 TSAGNMQITTGRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           T AG   +  G  +T+ +  S   V+S G    G LGHG +         I F S   V 
Sbjct: 63  TDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHG-DCNDVFVPRPIEFFSGRPVH 121

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +V+  + H   V   G++FT G N +   G   TN     P+LV AL+G   + V  G  
Sbjct: 122 RVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTN-DCLSPQLVVALQGERVRSVACGSE 180

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +   T  G V + G   +G LG G++ DR  P  +  LE +  +V    G  +   V+ 
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGI-RMVSAECGWRHSAVVSE 239

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V++FG      LGHG+  D   P  +   R     +  V+ G  H +A DSSG +Y 
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRH--TRISSVAGGWRHTMAADSSGNLYG 297

Query: 347 WGKGYCGALGHGDEIDKTLP 366
           WG    G LG GD  D+  P
Sbjct: 298 WGWNKFGQLGLGDSSDRPSP 317



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 5/249 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL+++    +F+ G +  G LG G  T  C+S   +       V  V+    
Sbjct: 122 RVACGDTHTLVVAGEGELFTFGRNQNGQLGLG-HTNDCLSPQLVVALQGERVRSVACGSE 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+    +SG VF+ G       G  ++ +  + P  V  L+G+       G   +  ++ 
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGES-QDRYLPTRVVGLEGIRMVSAECGWRHSAVVSE 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V T G + +GQLGHGD  DR  P  +A L     +  +A G  + +A   +G +Y +
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT-RISSVAGGWRHTMAADSSGNLYGW 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G+  D   P  +      G  V  V+ G  H VA+   G VY+WG+G  G
Sbjct: 299 GWNKFGQLGLGDSSDRPSPVLVGG-ALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNG 357

Query: 354 ALGHGDEID 362
            LGHG E D
Sbjct: 358 QLGHGAEQD 366



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 10/155 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVVYSF 293
           G V + G    GQLGHG   +   PK+I+ L + G +  +  G  Y +AV    G VYS+
Sbjct: 32  GIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAG-IESVVCGAEYTIAVAPSRGQVYSW 90

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LGHG+ +D   PR I+ F  + +H  RV+ GD H + +   G ++T+G+   G
Sbjct: 91  GWGDFGRLGHGDCNDVFVPRPIEFFSGRPVH--RVACGDTHTLVVAGEGELFTFGRNQNG 148

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            LG G   D   P+ +      +A+QG  V +  C
Sbjct: 149 QLGLGHTNDCLSPQLV------VALQGERVRSVAC 177


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1138 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1196

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1197 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTMKVACGVWHTVAI 1255

Query: 225  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               +N TG       + T G     +LGHG+      P  ++ L +  +  QIA G +  
Sbjct: 1256 VEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFQQIACGHTLT 1314

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1315 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1372

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD+ D+  P  + +LK
Sbjct: 1373 SEVFTWGKGSNGRLGHGDKEDRKTPTLVEALK 1404



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 15/219 (6%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            + ++    H A V + G+VFT G+ +    GH      + RP+LVE L       V  G 
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGH-GIQVDVSRPKLVEFLALTNIDFVACGE 1142

Query: 226  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1143 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1202

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+     
Sbjct: 1203 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTMKVACGVWHTVAIVEVMN 1260

Query: 339  -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                  SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 1261 QTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSL 1299



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 16/250 (6%)

Query: 114  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAA-- 163
            + +  G +H+ L  +N  +F+ G    GVLGHG       P+  + +S  +    +    
Sbjct: 1191 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVW 1250

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            H V +    N     + S ++FT GD      GH +    +  P  V +L     +Q+  
Sbjct: 1251 HTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFQQIAC 1309

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYML 282
            G   T  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  ++ 
Sbjct: 1310 GHTLTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHHVA 1367

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             +T    V+++G GSN  LGHG++ D   P  ++  + +  HV  +S  D+ V +     
Sbjct: 1368 VLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKER--HVKSISCADQSVCSGCRQA 1425

Query: 343  YVYTWGKGYC 352
            + +T  +  C
Sbjct: 1426 FGFTRKRHNC 1435



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 10/170 (5%)

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G+     +T +G V T G    G+LGHG  +D   PK +  L  + ++  +A G  +
Sbjct: 1086 IACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFL-ALTNIDFVACGEYH 1144

Query: 281  MLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              AV+ +G ++++G G +    LGHG       P+ + +   +G+ V+ V+ G  H    
Sbjct: 1145 TCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRV-SGPVEGLQVLSVACGTWHSALA 1203

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             ++G ++T+G G  G LGHGD    + P+ +  L       GL  +   C
Sbjct: 1204 TANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML------SGLKTMKVAC 1247


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 115/250 (46%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 90  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 148

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 149 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 208

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 209 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 268

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 269 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 326

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 327 TPVTVEKDRI 336



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 3/164 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 86  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 144

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 145 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 203

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
               G +G G  +++  P  ++    +  V  ++     C  +V
Sbjct: 204 YNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVV 247



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 84  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATT 142

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 143 EGEVFTWGHNAYSQLGNG 160


>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 418

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 130/287 (45%), Gaps = 32/287 (11%)

Query: 131 VFSCGSSLCGVLGHG----------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             S G+   G LGHG          P ++    F  +   S   V  V+A   H+ F++ 
Sbjct: 27  ALSAGNGDHGRLGHGSPDEAHDGWSPRSSNY--FHPVEGVSDLDVRAVAAGGAHSVFLVA 84

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G VFTCG N+    GH     P F P  +     V    V AG   T  + + G V   
Sbjct: 85  GGHVFTCGLNADGQLGH-SAGLP-FSPEPMLVRLDVEVVSVAAGNGHTLCVDVDGCVWAF 142

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G NT GQLG G+ +D   P+ I  L +   V Q+A G  + LAV  +G VYS+GS ++  
Sbjct: 143 GKNTAGQLGTGN-VDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGV 201

Query: 301 LGHGEQ-----------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           LGHG +             EL PR +++   K   VV V+AG  H   +D  G +YTWG+
Sbjct: 202 LGHGSETWNDGWFYRTARAELAPRLVRSLEDK--KVVAVAAGHMHSACIDDRGNLYTWGQ 259

Query: 350 GYCGALGHGDEID--KTLPEPLSSLK--SHLAVQGLSVLAEVCPTIV 392
           G    LG   +    +T P P+ SL+    +A  GL  LA     +V
Sbjct: 260 GRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAGVV 306



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 135/314 (42%), Gaps = 43/314 (13%)

Query: 92  RVLRFLQSVEHSSD--IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGH--GPE 147
           R   +   VE  SD  +   +AG      G +   L++   VF+CG +  G LGH  G  
Sbjct: 53  RSSNYFHPVEGVSDLDVRAVAAG------GAHSVFLVAGGHVFTCGLNADGQLGHSAGLP 106

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
            +      R++      VV V+A   H   V   G V+  G N++   G  + +  I  P
Sbjct: 107 FSPEPMLVRLDV----EVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTI--P 160

Query: 208 RLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLD---------- 255
           R + AL K     QV  G   +  +   G V++ GS+T G LGHG +T +          
Sbjct: 161 RKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARA 220

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPR 313
              P+ +  LE+   VV +AAG  +   +   G +Y++G G  +   L       E  P 
Sbjct: 221 ELAPRLVRSLEDK-KVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTPS 279

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTLPEPLSS 371
            + + R     V  ++ G  H +A  ++G V +WG    G LGHG   +I   +P+P+  
Sbjct: 280 PVMSLR----FVHEIACGGLHSLANTNAG-VVSWGANQHGELGHGHHSDIKSAVPKPIK- 333

Query: 372 LKSHLAVQGLSVLA 385
               +  +G S LA
Sbjct: 334 ----MGSRGWSKLA 343



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---------- 163
           Q+  G  H+L +++   V+S GSS  GVLGHG ET     F R      A          
Sbjct: 174 QVACGAEHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDK 233

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDN-------SSFCCGHRDTNRPIFRPRLVEALKGV 216
            VV V+A   H+A +   G ++T G         S+    H  T  P+   R V  +   
Sbjct: 234 KVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEI--- 290

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGS--VV 272
                  GL+          V + G+N HG+LGHG    +    PK I    ++GS    
Sbjct: 291 ----ACGGLH--SLANTNAGVVSWGANQHGELGHGHHSDIKSAVPKPI----KMGSRGWS 340

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFC------------LGHGEQHDELQPRAIQTFRR 320
           ++AAG  +   +  NG ++++G G +              LG G + D  +P  +     
Sbjct: 341 KLAAGWKHSAGIA-NGKLFAWGFGGSMGSYADEKMSSGGQLGLGNEFDFWEPHEVSVPGE 399

Query: 321 KGIHVVRVSAGDEHVVAL 338
               V  VS G  H +AL
Sbjct: 400 ----VKDVSCGFNHTLAL 413


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 14/268 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + + +G  H+L L ++ SV++ G +  G LG G  T +          S   VV V+A +
Sbjct: 112 VSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDS---VVAVAAGD 168

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G V+  G N     G R   +P   P  V  L GV    + AG +FT  + 
Sbjct: 169 FHSLALREDGTVWAWGTNFHGQLG-RGHTQPGLTPEQVPGLNGVVA--LAAGFDFTLAVL 225

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   GSN  GQLG G +  R +P  ++   E+  + ++ AG  + LA+  +G V++
Sbjct: 226 EDGTVRAWGSNGSGQLGDGTSTQRLSPVKVS---ELSGITEVRAGTYHALALGKDGGVWT 282

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS ++  LG G  +D   P  +    R    V  V++ D   +AL  +G V+ WG    
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLER----VKAVASMDSDSLALLDTGAVFAWGANGS 338

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           G LG GD  D+  P P+  L +  +V G
Sbjct: 339 GQLGDGDTTDRATPGPVPGLNAVASVVG 366



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 128/274 (46%), Gaps = 20/274 (7%)

Query: 111 AGNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           AG   + TG +H+L  + + SV++ G +  G LG G  T +  +  R+       V  V+
Sbjct: 409 AGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDG-STAERHAAVRVE--GLGGVRSVA 465

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           ++ +H+  V   G V+  G N++   G     D  RP+  P L           V AG +
Sbjct: 466 SAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS------VTAVAAGGS 519

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               L   G V   G N  GQLG G T+DR TP  ++ L   G+VV +AAG  + +A+  
Sbjct: 520 HVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGL---GAVVAVAAGSYFSMALQS 576

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++G G    LG G     L P  ++       ++ RV+AG  H +A+   G V+ 
Sbjct: 577 DGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGL----ANITRVAAGSAHALAVRGDGTVWA 632

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           WG    G LG G   D+  P  +  L+   AV G
Sbjct: 633 WGDNGEGQLGDGSWADRFRPVQVPGLQGITAVSG 666



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 14/260 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +++ GR HTL++ ++ +V + G +  G LG G  T +      ++ P    V  V++   
Sbjct: 763  RLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRT---GPVSVPGVPCVRSVASGIQ 819

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  +   G V+  G N+    G   T  P   P LVE L+GV    + AG + +  L  
Sbjct: 820  HSLALACDGTVWAWGANARGQLGD-GTTTPRVTPGLVEGLRGVVA--LAAGGDASVALRA 876

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V + G N  GQLG G   DR  P   A +E + + V +A G ++ LAV  +G ++++
Sbjct: 877  DGSVWSWGGNASGQLGDGTLTDRALP---AHVEHLSNAVAVAVGETHALAVGEDGALWAW 933

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G+  +  LG G     L P  ++   R    V  V+AG    VA+   G  + WG    G
Sbjct: 934  GANGSGQLGDGGTAPSLTPVRVKGLER----VASVAAGRAFSVAVRDDGTAWAWGTNPSG 989

Query: 354  ALGHGDEIDKTLPEPLSSLK 373
             LG G    +++P  ++SLK
Sbjct: 990  QLGDGTNHARSVPNQVTSLK 1009



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 16/253 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H L++  + ++++ G  L G LGHG      V    +     A V  ++    H
Sbjct: 364 VVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVMRL---AGVTSMATGSFH 420

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +   L  G V+  G N+    G   T       R VE L GV  + V +  + +  + + 
Sbjct: 421 SLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVR-VEGLGGV--RSVASAAHHSLAVGMD 477

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N  GQLG G TLDR  P ++  L    SV  +AAG S++LA+  +G V+++G
Sbjct: 478 GTVWAWGRNAAGQLGDGTTLDRARPVAVPGLT---SVTAVAAGGSHVLALRSDGSVWAWG 534

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
             +   LG G   D L P      R  G+  VV V+AG    +AL S G V+TWG+G+ G
Sbjct: 535 YNALGQLGDGTTVDRLTP-----VRVSGLGAVVAVAAGSYFSMALQSDGTVWTWGEGFEG 589

Query: 354 ALGHGDEIDKTLP 366
            LG G  + +  P
Sbjct: 590 QLGDGGGVQRLSP 602



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 115/254 (45%), Gaps = 13/254 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+   +VF+ G++  G LG G  T +    T    P    V  V     HA  + + G +
Sbjct: 324 LLDTGAVFAWGANGSGQLGDGDTTDRA---TPGPVPGLNAVASVVGGAQHALVLRKDGTL 380

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G   S   GH  + R +  P  V  L GV     T   +    L   G V   G NT
Sbjct: 381 WAWGGGLSGQLGHGGSERHVV-PAPVMRLAGV-TSMATGSFHSLAALG-DGSVWAWGRNT 437

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           +GQLG G T +R    +   +E +G V  +A+   + LAV  +G V+++G  +   LG G
Sbjct: 438 YGQLGDGSTAER---HAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDG 494

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
              D  +P A+         V  V+AG  HV+AL S G V+ WG    G LG G  +D+ 
Sbjct: 495 TTLDRARPVAVPGL----TSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRL 550

Query: 365 LPEPLSSLKSHLAV 378
            P  +S L + +AV
Sbjct: 551 TPVRVSGLGAVVAV 564



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 118/273 (43%), Gaps = 14/273 (5%)

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
            H++  VE   G   + +  +H+L +  + +V++ G +  G LG G   T       +  
Sbjct: 449 RHAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDG---TTLDRARPVAV 505

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    V  V+A  +H   +   G V+  G N+    G   T      P  V  L  V   
Sbjct: 506 PGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGD-GTTVDRLTPVRVSGLGAVVA- 563

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            V AG  F+  L   G V T G    GQLG G  + R +P  +   E + ++ ++AAG +
Sbjct: 564 -VAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRLSPVRV---EGLANITRVAAGSA 619

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV G+G V+++G      LG G   D  +P  +Q    +GI    VS G  H +AL 
Sbjct: 620 HALAVRGDGTVWAWGDNGEGQLGDGSWADRFRP--VQVPGLQGI--TAVSGGRSHSMALQ 675

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             G V  WG    G LG G    +  P  +  L
Sbjct: 676 GDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGL 708



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 125/267 (46%), Gaps = 15/267 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+I  G  H+L +S    V++ G +  G LG    + Q ++  R+   +  ++V V + +
Sbjct: 61  MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRL--AALENIVSVVSGD 118

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +   G V+T G NSS   G    T+R    P  V  L  V    V AG   +  L
Sbjct: 119 AHSLALGADGSVWTWGGNSSGQLGDGTTTDRAT--PMRVAGLDSVVA--VAAGDFHSLAL 174

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G+N HGQLG G T    TP+ +  L     VV +AAG  + LAV  +G V 
Sbjct: 175 REDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLN---GVVALAAGFDFTLAVLEDGTVR 231

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++GS  +  LG G     L P  ++     GI  VR  AG  H +AL   G V+TWG   
Sbjct: 232 AWGSNGSGQLGDGTSTQRLSP--VKVSELSGITEVR--AGTYHALALGKDGGVWTWGSNA 287

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LG G   D+ +P  +  L+   AV
Sbjct: 288 SGQLGDGTWNDRAVPMQVPGLERVKAV 314



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 16/270 (5%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++ G +H + +S + +V++ G +  G LG G  +   +   ++  P    V  V+A E  
Sbjct: 1014 MSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQV--PELRGVEAVAAGEQF 1071

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV----PCKQVTAGLNFTGF 230
               VL  G     G N     G   T  P   P  V+ ++G     P + V A       
Sbjct: 1072 TVAVLLDGTARAWGSNEYGQLGDGKTG-PQLTPMAVK-IEGPKIRPPVRTVRAWGQHAVV 1129

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                G V T G NT GQLG G T  R  P ++  L    SVV +++G  + LA+  +G V
Sbjct: 1130 QMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLA---SVVAVSSGAWHSLALLSDGTV 1186

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +++G+     LG G      +P  +         VV + +G  H +A+ S G V+TWG  
Sbjct: 1187 WAWGANGFGQLGDGTSTPRTRPVQVAGLG----DVVAIGSGGYHALAVCSDGSVWTWGYN 1242

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
              G LG G    ++LP  +  L+  +AV G
Sbjct: 1243 AFGQLGDGTAESRSLPTRVEGLEGVVAVAG 1272



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
            + +++G +H+L L+S+ +V++ G++  G LG G  T +    TR +       VV + + 
Sbjct: 1168 VAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPR----TRPVQVAGLGDVVAIGSG 1223

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              HA  V   G V+T G N+    G   T      P  VE L+GV    V  G +++  L
Sbjct: 1224 GYHALAVCSDGSVWTWGYNAFGQLGD-GTAESRSLPTRVEGLEGVVA--VAGGDHYSLAL 1280

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
               G +   G+N  GQLG G    R    S   ++ V  VV + AG ++ +A+ G+G V+
Sbjct: 1281 HSDGTLSAWGNNASGQLGDGTGTTR---YSRVAVKGVDGVVDVRAGATHTVALRGDGTVW 1337

Query: 292  SFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            ++G  +   LG G     ++  PR +         V  V AG  H  A+   G V+TWG+
Sbjct: 1338 TWGDNAFGQLGDGASGTRMRLVPRPVPNLS----SVSAVGAGARHTFAVALKGTVWTWGR 1393

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
               G LG GD  ++T P  +  L     V G
Sbjct: 1394 NSHGQLGLGDNTNRTEPLRVRELSDVTVVSG 1424



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 100  VEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
            VE    +V  +AG      G     L ++ SV+S G +  G LG G  T + +     + 
Sbjct: 855  VEGLRGVVALAAG------GDASVALRADGSVWSWGGNASGQLGDGTLTDRALP---AHV 905

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
               ++ V V+  E HA  V + G ++  G N S   G   T  P   P  V+ L+ V   
Sbjct: 906  EHLSNAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTA-PSLTPVRVKGLERV--A 962

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
             V AG  F+  +   G     G+N  GQLG G    R  P  +  L+    +  ++AG  
Sbjct: 963  SVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLK---GIRAMSAGAH 1019

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +++A++ +G V+++G  +   LG G      + PR +   R     V  V+AG++  VA+
Sbjct: 1020 HVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQVPELR----GVEAVAAGEQFTVAV 1075

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               G    WG    G LG G    KT P+
Sbjct: 1076 LLDGTARAWGSNEYGQLGDG----KTGPQ 1100



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 112/257 (43%), Gaps = 20/257 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G Y ++ L S+ +V++ G    G LG G    Q +S  R+     A++ +V+A  
Sbjct: 562 VAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDG-GGVQRLSPVRVE--GLANITRVAAGS 618

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            HA  V   G V+  GDN     G     +R  FRP  V  L+G+    V+ G + +  L
Sbjct: 619 AHALAVRGDGTVWAWGDNGEGQLGDGSWADR--FRPVQVPGLQGITA--VSGGRSHSMAL 674

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV 289
              G V   G N +GQLG G    R  P  I  L  +      A  PS++  LA+  +G 
Sbjct: 675 QGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGI-----QALHPSHLHVLALHADGT 729

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +  +G      LG G       P  ++   R    V R+S G  H + + + G V  WG+
Sbjct: 730 LRGWGYNRFGQLGLGAAGWSAVPVQVRGIGR----VDRLSVGRAHTLMVRADGTVMAWGE 785

Query: 350 GYCGALGHGDEIDKTLP 366
              G LG G    +T P
Sbjct: 786 NGSGQLGDGTSTHRTGP 802



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 131/339 (38%), Gaps = 66/339 (19%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           VE  A   ++  G  H L +  + +V++ G +  G LG G   +    F  +  P    +
Sbjct: 605 VEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDG---SWADRFRPVQVPGLQGI 661

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVT-- 222
             VS   +H+  +   G V   G N     G    T+R   RP L+  L G+     +  
Sbjct: 662 TAVSGGRSHSMALQGDGTVRAWGYNGYGQLGDGTLTSR--VRPALIPGLTGIQALHPSHL 719

Query: 223 ---------------------AGLNFTGF-----------------------LTIR--GH 236
                                 GL   G+                       L +R  G 
Sbjct: 720 HVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGT 779

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N  GQLG G +  R  P S+     V  V  +A+G  + LA+  +G V+++G+ 
Sbjct: 780 VMAWGENGSGQLGDGTSTHRTGPVSV---PGVPCVRSVASGIQHSLALACDGTVWAWGAN 836

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           +   LG G     + P  ++  R     VV ++AG +  VAL + G V++WG    G LG
Sbjct: 837 ARGQLGDGTTTPRVTPGLVEGLR----GVVALAAGGDASVALRADGSVWSWGGNASGQLG 892

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQED 395
            G   D+ LP  +  L + +AV     + E     V ED
Sbjct: 893 DGTLTDRALPAHVEHLSNAVAV----AVGETHALAVGED 927



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 10/208 (4%)

Query: 107  VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            VE   G + +  G +++L + S+ ++ + G++  G LG G  TT+   ++R+       V
Sbjct: 1261 VEGLEGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTR---YSRVAVKGVDGV 1317

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAG 224
            V V A   H   +   G V+T GDN+    G   +  R    PR V  L  V    V AG
Sbjct: 1318 VDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSA--VGAG 1375

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               T  + ++G V T G N+HGQLG GD  +R  P  +    E+  V  ++ G  + LA+
Sbjct: 1376 ARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRV---RELSDVTVVSGGADFSLAM 1432

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQP 312
              +G V S+GS     LG G       P
Sbjct: 1433 KRDGTVLSWGSSLYGSLGLGATGHRSSP 1460



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 16/256 (6%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I +G YH L + S+ SV++ G +  G LG G   ++ +  TR+       VV V+  +
Sbjct: 1218 VAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLP-TRVE--GLEGVVAVAGGD 1274

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            +++  +   G +   G+N+S   G         R   V          V AG   T  L 
Sbjct: 1275 HYSLALHSDGTLSAWGNNAS---GQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALR 1331

Query: 233  IRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
              G V T G N  GQLG G   T  R  P+   P+  + SV  + AG  +  AV   G V
Sbjct: 1332 GDGTVWTWGDNAFGQLGDGASGTRMRLVPR---PVPNLSSVSAVGAGARHTFAVALKGTV 1388

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +++G  S+  LG G+  +  +P  ++        V  VS G +  +A+   G V +WG  
Sbjct: 1389 WTWGRNSHGQLGLGDNTNRTEPLRVRELS----DVTVVSGGADFSLAMKRDGTVLSWGSS 1444

Query: 351  YCGALGHGDEIDKTLP 366
              G+LG G    ++ P
Sbjct: 1445 LYGSLGLGATGHRSSP 1460



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 10/164 (6%)

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIA 275
           P  ++ AG   + +L+  G V   G N  GQLG  +T L    P  +A LE   ++V + 
Sbjct: 59  PPMRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALE---NIVSVV 115

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEH 334
           +G ++ LA+  +G V+++G  S+  LG G   D   P      R  G+  VV V+AGD H
Sbjct: 116 SGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATP-----MRVAGLDSVVAVAAGDFH 170

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            +AL   G V+ WG  + G LG G       PE +  L   +A+
Sbjct: 171 SLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNGVVAL 214


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 130/276 (47%), Gaps = 24/276 (8%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQ---VSASENHA 175
            L+  +   ++CG    G LG G           +N P      + HVV+   V +   HA
Sbjct: 2745 LVTQSGKAYACGEGSNGRLGLGHSRN-------VNSPHQITALSQHVVRKVAVHSGGRHA 2797

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
              +   G+VF+ G+      GH D    +  PR +EAL G   + V AG N +  +T  G
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGHGDVTS-LDTPRCIEALNGFRVRDVAAGSNHSAAVTSSG 2856

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYS 292
             ++T G   +G+LGHGD L + TPK +  L  VG  VVQ++ G   +  LA+   G+VYS
Sbjct: 2857 ELYTWGLGEYGRLGHGDNLTQLTPKRVESL--VGQRVVQVSCGSRDAQTLALVEGGLVYS 2914

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G    LG G       P  +      G+ V  V  G +  VAL  +G+VYTWGKG  
Sbjct: 2915 WGDGDFGKLGRGGSEGCSSPCLVDKL--SGLGVCHVECGAQFSVALTCNGHVYTWGKGDY 2972

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
              LGHG +     P  +  L+    V G+SV A  C
Sbjct: 2973 FRLGHGSDQHVRWPTLVEGLRGK-KVIGVSVGALHC 3007



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 129/286 (45%), Gaps = 14/286 (4%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
            V   L+S++H    V+  A N   + G++   L S   V+S G    G LGHG     C 
Sbjct: 3689 VPSLLESLQHV--FVKKVAVN---SGGKHCLALSSEGEVYSWGEGEDGKLGHG-NKLPCD 3742

Query: 153  SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
                I       VV V+    H+A +   G+++T G       GH D++  + +P+LVEA
Sbjct: 3743 RPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQL-KPKLVEA 3801

Query: 213  LKGVPCKQVTAGLNFTGFLTIR----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            L G     V  G        I     G V + G   +G+LG G +     P  I  L  +
Sbjct: 3802 LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGL 3861

Query: 269  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            G ++++  G  + +A++ NG VY++G G    LGHG      +P+ + T   +G  V+ +
Sbjct: 3862 G-IIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTL--QGKKVISI 3918

Query: 329  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            S G  H V     G VYTWG    G LG G       P  +++L++
Sbjct: 3919 STGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQN 3964



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 15/246 (6%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASENH 174
            GR+   L ++  VFS G    G LGHG     +T +C+        +   V  V+A  NH
Sbjct: 2794 GRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEAL-----NGFRVRDVAAGSNH 2848

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +A V  SG+++T G       GH D N     P+ VE+L G    QV+ G      L + 
Sbjct: 2849 SAAVTSSGELYTWGLGEYGRLGHGD-NLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALV 2907

Query: 235  --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V++ G    G+LG G +    +P  +  L  +G V  +  G  + +A+T NG VY+
Sbjct: 2908 EGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLG-VCHVECGAQFSVALTCNGHVYT 2966

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G  F LGHG       P  ++  R  G  V+ VS G  H +A+  +G V+ WG    
Sbjct: 2967 WGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQVFAWGDNDH 3024

Query: 353  GALGHG 358
            G  G+G
Sbjct: 3025 GQQGNG 3030



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH +   P  RPR++E+L+G     V  G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGN-KLPCDRPRIIESLRGKDVVDVACGG 3762

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYML 282
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L  +G  V+ +A  +G +   
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEAL--LGYRVMDVACGSGDAQTC 3820

Query: 283  AVTGN--GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            A+T    G V+S+G G    LG G       P  I++    G+ +++V  G +  VAL +
Sbjct: 3821 AITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESL--SGLGIIKVECGSQFSVALSN 3878

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            +G VYTWGKG    LGHG  +D+ +  P    K  + +QG  V++
Sbjct: 3879 NGSVYTWGKGDYHRLGHG--VDEHVRRP----KKVMTLQGKKVIS 3917



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 12/220 (5%)

Query: 145  GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNR 202
            GP+ ++      +++  +   + V+        V QSG+ + CG+  N     GH   +R
Sbjct: 2713 GPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGH---SR 2769

Query: 203  PIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
             +  P  + AL     ++V   +G      LT  G V + G    G+LGHGD     TP+
Sbjct: 2770 NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPR 2829

Query: 261  SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
             I  L     V  +AAG ++  AVT +G +Y++G G    LGHG+   +L P+ +++   
Sbjct: 2830 CIEALNGF-RVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESL-- 2886

Query: 321  KGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  VV+VS G  D   +AL   G VY+WG G  G LG G
Sbjct: 2887 VGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG 2926



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 3/174 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P+ V+    +    V  G      +T  G  + CG  ++G+LG G + +  +P  I  L 
Sbjct: 2722 PQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALS 2781

Query: 267  E-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            + V   V + +G  + LA+T +G V+S+G G +  LGHG+      PR I+     G  V
Sbjct: 2782 QHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEAL--NGFRV 2839

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              V+AG  H  A+ SSG +YTWG G  G LGHGD + +  P+ + SL     VQ
Sbjct: 2840 RDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQ 2893



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 6/216 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     +   G+V+  G  +    G       +  P L+E+L+ V  K+
Sbjct: 3645 SALRPIQLAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAES-VTVPSLLESLQHVFVKK 3703

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+ L    P+ I  L     VV +A G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRG-KDVVDVACGG 3762

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD    A+
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAI 3822

Query: 339  --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              +  G V++WG G  G LG G      +P  + SL
Sbjct: 3823 TDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESL 3858



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 4/192 (2%)

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            GQ++  G N     G  +  + +  P + EAL  +   Q+  G      +T  G V+  G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAK-VKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATG 3672

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
                G+LG G       P  +  L+ V    V + +G  + LA++  G VYS+G G +  
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGK 3732

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGHG +    +PR I++ R  G  VV V+ G  H  A+ + G +YTWGKG  G LGHGD 
Sbjct: 3733 LGHGNKLPCDRPRIIESLR--GKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDS 3790

Query: 361  IDKTLPEPLSSL 372
             D+  P+ + +L
Sbjct: 3791 DDQLKPKLVEAL 3802



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  +++S  +++ G    G LGHG   TQ ++  R+       VVQVS     
Sbjct: 2842 VAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQ-LTPKRVESLVGQRVVQVSCGSRD 2900

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +++ G V++ GD      G R  +     P LV+ L G+    V  G  F+  LT
Sbjct: 2901 AQTLALVEGGLVYSWGDGDFGKLG-RGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALT 2959

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              GHV+T G   + +LGHG       P  +  L     V+ ++ G  + LAVT  G V++
Sbjct: 2960 CNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRG-KKVIGVSVGALHCLAVTDAGQVFA 3018

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q     GI + RV+ G  H VA
Sbjct: 3019 WGDNDHGQQGNGSITVNRRPTLVQGI--DGIKITRVACGSSHSVA 3061



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 1/139 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P     L  +  + Q+A G   + A+T +G VY+ G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPI-QLAGGEQTLFAITSDGRVYATG 3672

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+G  G 
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGK 3732

Query: 355  LGHGDEIDKTLPEPLSSLK 373
            LGHG+++    P  + SL+
Sbjct: 3733 LGHGNKLPCDRPRIIESLR 3751



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 1/138 (0%)

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V+  G N   QLG         P+++     +   + +A G   +  VT +G  Y+ G 
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSL-QPISVAGGSKSLFLVTQSGKAYACGE 2757

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            GSN  LG G   +   P  I    +  +  V V +G  H +AL + G V++WG+G  G L
Sbjct: 2758 GSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKL 2817

Query: 356  GHGDEIDKTLPEPLSSLK 373
            GHGD      P  + +L 
Sbjct: 2818 GHGDVTSLDTPRCIEALN 2835



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 7/181 (3%)

Query: 106  IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            +V+ S G+    T      L+    V+S G    G LG G  +  C S   ++  S   V
Sbjct: 2891 VVQVSCGSRDAQT----LALVEGGLVYSWGDGDFGKLGRG-GSEGCSSPCLVDKLSGLGV 2945

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
              V      +  +  +G V+T G    F  GH  +++ +  P LVE L+G     V+ G 
Sbjct: 2946 CHVECGAQFSVALTCNGHVYTWGKGDYFRLGH-GSDQHVRWPTLVEGLRGKKVIGVSVGA 3004

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                 +T  G V   G N HGQ G+G       P  +  ++ +  + ++A G S+ +A T
Sbjct: 3005 LHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGI-KITRVACGSSHSVAWT 3063

Query: 286  G 286
             
Sbjct: 3064 A 3064


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 132/262 (50%), Gaps = 12/262 (4%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSS---LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           Q++ G  HTL +++   V   G +    CG+     E  +   F  +   S+  V QV+ 
Sbjct: 92  QVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRF--LKSLSSCQVAQVAC 149

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 228
              H+  + + G++F  GDNS    G     R ++R  P+ + +L GVP +++  G   +
Sbjct: 150 GSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHS 209

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L++ G V   G N  GQLG G T DR +P  +  L+    V  IA G +Y   +T +G
Sbjct: 210 FALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLK-TKQVKYIACGQNYTAILTASG 268

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGYVYTW 347
            ++ FG GS   LGHG   +E+ PR++Q F   G  + +V+ G +H + L+  +G  ++ 
Sbjct: 269 GLFLFGQGSEGQLGHGSHSNEVNPRSVQGFL--GSEITQVACGRQHTLVLEGRTGRFFSL 326

Query: 348 GKGYCGALGHGDEIDKTLPEPL 369
           G+G  G LG  ++  K+   P+
Sbjct: 327 GQGSKGQLGLDNDSSKSCASPV 348



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 117/253 (46%), Gaps = 14/253 (5%)

Query: 130 SVFSCGSSL---CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           SVFS G +     G+ G G +     S   +   +   + ++S    H   +L+ G V  
Sbjct: 2   SVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMM 61

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG N     G    +RP      V A + +   QV+ G + T  +T RG V   G N  G
Sbjct: 62  CGANDR---GQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118

Query: 247 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           Q G   GD+ D+  P+ +  L     V Q+A G  + +A+T +G ++++G  S   LG G
Sbjct: 119 QCGLSTGDSEDKRKPRFLKSLSSC-QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIG 177

Query: 305 EQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                L    P+ + +    G+ + R++ G  H  AL  SG V+ WGK  CG LG G   
Sbjct: 178 APGRTLYRDHPQQLSSL--PGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTE 235

Query: 362 DKTLPEPLSSLKS 374
           D+  P PL +LK+
Sbjct: 236 DRVSPTPLKNLKT 248



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 39/249 (15%)

Query: 115 QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSAS 171
           Q+  GR HTL++   +   FS G    G LG   ++++ C S     + + +     S  
Sbjct: 305 QVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNG 364

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPI-FRPRLVEALKGVPCKQVTAGLNFT 228
           E   + +   G +F  GD S FC   R  D + P+ FR    EA+  +    +T  L   
Sbjct: 365 EESRSII---GSIFAGGDQS-FCIVSRGNDPDHPLDFR----EAIPSIEPVVLTKDL--- 413

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
                             ++     L  P+ K++  LE   ++   A   +  L   G+G
Sbjct: 414 ----------------LQEVSESSPLLEPS-KAVQTLEM--ALSSPACLNASFLVGAGSG 454

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGYVYTW 347
            ++ FG GS   LGHG   +E+ PR+++ F   G  + +V+ G +H + L+  +G  Y+ 
Sbjct: 455 GLFLFGQGSEGQLGHGSHSNEVNPRSVKDFL--GNEITQVACGRQHTLVLEGRTGGFYSL 512

Query: 348 GKGYCGALG 356
           G+G  G LG
Sbjct: 513 GQGSKGQLG 521


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 110/208 (52%), Gaps = 6/208 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   GQ+F  G+N+    G R        P+ +++L  +P  Q++A
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 175

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYML 282
           G N +  L++ G V   GSN+ GQLG GDT DR  P  +  L   G   V I+ G  +  
Sbjct: 176 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CGKKTVSISCGGEHTA 233

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSS 341
            ++  G V++FGSG    LGH    DE  PR I      G  V +V+ G  H +   +SS
Sbjct: 234 TLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW--GSKVSQVTCGRHHTLVFEESS 291

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             +Y++G G  G LG+G+++ +++P P+
Sbjct: 292 KLIYSFGCGMQGQLGNGEQVKQSVPLPV 319



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 13/230 (5%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRP- 207
           C+ F R    S   +    A E      LQ+ ++    CG+  +      D  + +    
Sbjct: 45  CIGFIREGKVSVLRLHNEDADEKLEPLQLQNERIRSIVCGEAGAVLLA--DDGKVLIMDQ 102

Query: 208 ----RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSI 262
               R +++L+     Q+  G   +  L+  G +   G NTHGQLG   +     +P+ +
Sbjct: 103 STVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHL 162

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L E+  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G
Sbjct: 163 QSLCEI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CG 219

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              V +S G EH   L   G V+T+G G  G LGH    D+  P  ++ L
Sbjct: 220 KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAEL 269


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VSA  +H+  +L    V + G       GH DT+  +F P  + AL G     VT G
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF-PTKLSALDGQDIICVTCG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGL-MIQQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT +  V S+G   N  LG G   D L P+ IQ F    I +  V+AG EH VA+   G 
Sbjct: 134 VTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEE--IPIKMVAAGAEHSVAITKDGN 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +Y WG G  G LG GD  D+ LPE ++     +A+
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAM 226



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 8/266 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L+S + V S G    G LGHG +T   +  T+++      ++ V+   +H
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHG-DTDDRLFPTKLSALDGQDIICVTCGADH 77

Query: 175 AAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                +SG+ V++ G       GH D +  +  P  ++AL+G+  +Q+  G +    +T+
Sbjct: 78  TMARSESGRDVYSWGWGDFGRLGHGD-HSDLLIPHPIKALQGLMIQQIACGDSHCLAVTM 136

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
              V + G N +G+LG G   D   P+ I   EE+  +  +AAG  + +A+T +G +Y +
Sbjct: 137 DSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEI-PIKMVAAGAEHSVAITKDGNLYGW 195

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  +      G  +  V+ G  H + + SSG +YT G G  G
Sbjct: 196 GWGRYGNLGLGDRNDRLLPEKVTV---DGDKMAMVACGWRHTICVSSSGGLYTNGWGKYG 252

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHGD  D  +P  + +L      Q
Sbjct: 253 QLGHGDFEDHLVPRKVQALSDKFISQ 278



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 124/305 (40%), Gaps = 60/305 (19%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +T G  HT+  S S   V+S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  VTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHP-IKALQGLMIQQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V    QV + G N +   G   T      P+ ++  + +P K V AG   +  +T 
Sbjct: 130 HCLAVTMDSQVLSWGRNQNGELG-LGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++  G   +G LG GD  DR  P+ +    +   +  +A G  + + V+ +G +Y+ 
Sbjct: 189 DGNLYGWGWGRYGNLGLGDRNDRLLPEKVTV--DGDKMAMVACGWRHTICVSSSGGLYTN 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY---------- 343
           G G    LGHG+  D L PR +Q    K   + +VS G  H +AL SSG           
Sbjct: 247 GWGKYGQLGHGDFEDHLVPRKVQALSDK--FISQVSGGWRHSMALTSSGQLLGWGWNKFG 304

Query: 344 ------------------------------------------VYTWGKGYCGALGHGDEI 361
                                                     VY+WG+G  G LG+G+ I
Sbjct: 305 QIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETI 364

Query: 362 DKTLP 366
           D+ +P
Sbjct: 365 DRNVP 369



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ + +++  G    G LG G    + +   ++       +  V+    H
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLP-EKVTV-DGDKMAMVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G       GH D    +  PR V+AL      QV+ G   +  LT  
Sbjct: 234 TICVSSSGGLYTNGWGKYGQLGHGDFEDHLV-PRKVQALSDKFISQVSGGWRHSMALTSS 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N  GQ+G G+  D  +P  +  P ++   V  I+ G  + +AVT    VYS+
Sbjct: 293 GQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQ--KVQMISCGWRHTIAVTERENVYSW 350

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG+GE  D   P  I+ F   G
Sbjct: 351 GRGANGQLGNGETIDRNVPTIIEAFSVDG 379



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S  +++ G    G LGHG      V   ++   S   + QVS    H
Sbjct: 227 VACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVP-RKVQALSDKFISQVSGGWRH 285

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +  SGQ+   G N     G    N     P  V        + ++ G   T  +T R
Sbjct: 286 SMALTSSGQLLGWGWNKFGQIG-VGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTER 344

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            +V++ G   +GQLG+G+T+DR  P  I      GS  Q
Sbjct: 345 ENVYSWGRGANGQLGNGETIDRNVPTIIEAFSVDGSSGQ 383


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 16/254 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT+ + N  +V++ G + CG LG G  T + +    +     + VV ++A   H
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIP---VQVKGISDVVAIAAGMYH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGFLTI 233
              +   G V+  GDN     G+ +T +  +    V+ +KG+   K + AG ++T  L  
Sbjct: 288 TVALKNDGTVWAWGDNEHDQLGN-ETTKEEYHSTPVQ-VKGISDVKAIAAGASYTVVLKN 345

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N +G+LG G T +  TP  +  +  V +   IAAG  + + +  +G V+++
Sbjct: 346 DGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKA---IAAGAYHTVVLKNDGTVWTW 402

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 352
           G      LG+G   D   P  +     KGI  V+ ++AG  H VAL + G V+ WG  Y 
Sbjct: 403 GYNHYGELGNGTTVDSSTPVQV-----KGISDVKAIAAGACHTVALKNDGTVWAWGCNYY 457

Query: 353 GALGHGDEIDKTLP 366
           G LG+G  +D + P
Sbjct: 458 GELGNGTAVDSSTP 471



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 22/221 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQ 220
           V  ++A   H   +   G V+  G N    CG       TNR I  P  V+ +  V    
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWND---CGQLGDGTTTNRTI--PVQVKGISDVVA-- 280

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGP 278
           + AG+  T  L   G V   G N H QLG+  T +    TP  +  + +V +   IAAG 
Sbjct: 281 IAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKA---IAAGA 337

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVA 337
           SY + +  +G V+++G      LG G  ++   P  +      GI  V+ ++AG  H V 
Sbjct: 338 SYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVN-----GISNVKAIAAGAYHTVV 392

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           L + G V+TWG  + G LG+G  +D + P  +  +    A+
Sbjct: 393 LKNDGTVWTWGYNHYGELGNGTTVDSSTPVQVKGISDVKAI 433



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 20/164 (12%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
           V+  SD+   +AG        Y  +L ++ +V++ G +  G LG G   T   SFT +  
Sbjct: 324 VKGISDVKAIAAG------ASYTVVLKNDGTVWAWGVNEYGKLGDG---TTNNSFTPVQV 374

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGV 216
              ++V  ++A   H   +   G V+T G N     G+    D++ P+        +KG+
Sbjct: 375 NGISNVKAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPV-------QVKGI 427

Query: 217 -PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
              K + AG   T  L   G V   G N +G+LG+G  +D  TP
Sbjct: 428 SDVKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVDSSTP 471



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRV 328
           +V  IAAG  + +A+  +G V+++G      LG G   +   P  +     KGI  VV +
Sbjct: 227 TVKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQV-----KGISDVVAI 281

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +AG  H VAL + G V+ WG      LG+
Sbjct: 282 AAGMYHTVALKNDGTVWAWGDNEHDQLGN 310


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2764 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2822

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 2823 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2881

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 2882 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2939

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 2940 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 2997

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 2998 RKPQVVEGLRGKKIVHVAVGALHCLA 3023



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3782 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3835

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3836 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3894

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3895 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3953

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3954 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4011

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4012 HCVCCTEDGEVYTWGDNDEGQLGDG 4036



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2866

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2985 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3042

Query: 357  HG 358
            +G
Sbjct: 3043 NG 3044



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3794 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3852

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3853 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3911

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3912 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3969

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3970 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4005



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ +VV+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 468 ASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRL--GHGDT-VPLEEPKVISAFSGK 524

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 525 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 583

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 584 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 641

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 642 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 684



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G      LGHG       P+     S  +    +  HVV ++
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 534

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 593

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 652

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 711 GSN--DQCQHFDTLRVTKPEP 729



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2830

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2888

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQ 2907



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2799

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 2954



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     V ++G+V T   NS       DT      P+LV+ L      ++ A 
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS-------DT----LVPQLVQGLASRNVVKIAAH 478

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G     +LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 596

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 597 VTENGQVWSWGDGDYGKLGRG 617



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 4/209 (1%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TA 223
            VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+V   +
Sbjct: 3740 VQLIGGEQTLLAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNS 3798

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G      L+  G V++ G    G+LGHG+      P+ I  L  +  VV +AAG ++   
Sbjct: 3799 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSAC 3857

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L     
Sbjct: 3858 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 3917

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V++WG G  G LG G      +P  + SL
Sbjct: 3918 VWSWGDGDYGKLGRGGSDGCKVPMKIDSL 3946



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3032

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   +LAVT +G +Y
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLLAVTADGKLY 3759

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3760 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3819

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3820 DGKLGHGNRSPCDRPRVIESLR 3841



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3904 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3962

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3963 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4021

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4022 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4067



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 647

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 648 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 706

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 279
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 707 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPA 748



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2916 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2974

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2975 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3033

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3077



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA     +L V  NG V +    S          D L P+ +Q    + +  +   +
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS----------DTLVPQLVQGLASRNVVKIAAHS 479

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G    LGHGD +    P+ +S+     A
Sbjct: 480 DGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQA 526


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
           rubripes]
          Length = 4822

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFN--GKQAGKHVVHIACGST 547

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 548 YSAVITIDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 606

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 665

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 666 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 722

Query: 352 CGALGHGDEI-DKTLPEPLSSLK 373
              L H D + +K  P+ L  LK
Sbjct: 723 -DKLQHFDTLSNKKQPKALPGLK 744



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    +   A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4018 LLESIQHV--FIRKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4071

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  SG++FT G       GH D+   + +P+LV+AL+G
Sbjct: 4072 VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQG 4130

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G V +
Sbjct: 4131 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VTK 4189

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4190 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4247

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4248 HCVCCTEDGEVYTWGDNDEGQLGDG 4272



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4030 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4088

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4089 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4147

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4148 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVTKVECGSQFSVALTKSGA 4205

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4241



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 22/268 (8%)

Query: 131  VFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            +++CG +  G LG G      P   Q  + +  N+      V V +   HA  +   G+V
Sbjct: 2999 IYACGEATNGRLGLGLSSGTIPIPRQITALS--NY--VVKKVAVHSGGRHAMALTVDGKV 3054

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G +++ G   
Sbjct: 3055 FSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3113

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCL 301
            +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    L
Sbjct: 3114 YGRLGHGDNATQLRPKLVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3171

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++
Sbjct: 3172 GRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3229

Query: 362  DKTLPEPLSSLKS----HLAVQGLSVLA 385
                P+ +  L+     H+AV  L  LA
Sbjct: 3230 HVRKPQMVEGLRGKKIVHVAVGALHCLA 3257



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3042 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3100

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGD-NATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3218

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3219 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3276

Query: 357  HG 358
            +G
Sbjct: 3277 NG 3278



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 16/228 (7%)

Query: 161 SAAHVVQVSASEN--HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           S+  +V+++A  +  H   +  +G+VF+  CGD      GH D    +  P ++ A  G 
Sbjct: 477 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRL--GHGDATY-LEEPTMIAAFNGK 533

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +TI G ++T G   +G+LGHG + D+ TP  +  L+ +  VV
Sbjct: 534 QAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGL-KVV 592

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ ++    + + +V+V  
Sbjct: 593 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL--QDLDIVKVCC 650

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G +  VAL   G VYTWGKG    LGHG +     P+ L +L+    V
Sbjct: 651 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVV 698



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2976 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 3035

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3036 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3094

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3095 SHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3152

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3153 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3188



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3004

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3005 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3064

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3065 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3122

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3123 ATQLRPKLVKVLLGHRVIQ 3141



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3964 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4023

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G+ V
Sbjct: 4024 HVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEV 4081

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++AG  H   + +SG ++TWGKG  G LGHGD  D+  P+ + +L+ H  +
Sbjct: 4082 VDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4016 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4075

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4076 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4135 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL 4182



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 20/205 (9%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S+  V Q+  SE     +  SG V+T    S+              P L+ +L      +
Sbjct: 435 SSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAPMLIHSLSSRKIVK 483

Query: 221 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 275
           + A  +   +L +   G V + G    G+LGHGD      P  IA    ++ G  VV IA
Sbjct: 484 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIA 543

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 333
            G +Y   +T +G +Y++G G+   LGHG   D+  P  +     KG+ VV V+  +GD 
Sbjct: 544 CGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KGLKVVDVACGSGDA 601

Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
             +A+  +G V++WG G  G LG G
Sbjct: 602 QTLAVTENGQVWSWGDGDYGKLGRG 626



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG   TQ +    +       V+QV+     
Sbjct: 3090 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQ-LRPKLVKVLLGHRVIQVACGSRD 3148

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3149 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3207

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3208 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3266

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3267 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3309



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3995

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3996 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4055

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4056 DGKLGHGNRSPCDRPRVIESLR 4077



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3160 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3218

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3219 DYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3277

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3278 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3311



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4140 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4257

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4258 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4303


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 4/243 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   ++  P  I     +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGNQPTPCRIAAL--QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 364 TLP 366
           + P
Sbjct: 273 SYP 275



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 9/217 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 231
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G LG G   ++  P  +++L      QG+ V   VC
Sbjct: 209 NGQLGLGSSGNQPTPCRIAAL------QGIRVEQVVC 239



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 7/183 (3%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 319
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S   +  V 
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 380 GLS 382
           G++
Sbjct: 184 GIA 186



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 101/202 (50%), Gaps = 10/202 (4%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           L   + S++++   A  + +  G +H+++++ +  V++ G +  G +G G    Q +   
Sbjct: 115 LSPCQVSTNLINKKA--ISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRK 172

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK 214
             +      V+ ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+
Sbjct: 173 VTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRIAALQ 230

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+  +QV  G   T  LT  G ++  G+N++GQLG G+  ++  P  +   +E   +V+I
Sbjct: 231 GIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKE--RIVEI 288

Query: 275 AAGPS--YMLAVTGNGVVYSFG 294
           AA  S     A + +G VY +G
Sbjct: 289 AACHSSHTSAAKSQSGQVYMWG 310


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
           queenslandica]
          Length = 4694

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 110/234 (47%), Gaps = 6/234 (2%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +   L  +  V+S G    GVLG G   +Q    T +   S   +V +SA   H+A 
Sbjct: 516 SGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMHSAA 574

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 235
           V + G ++T G  S    GH +    +  P +VE L GV   QV   +G   T  L   G
Sbjct: 575 VTEDGVLYTWGKGSYGRLGHGNAEDKLI-PTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G   +G+LG   +     PK I+ +     VV+I  G    +A+T +G +YS+G 
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGC 693

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           G  + LGHG Q    QP+ I+        V  VS G +H VAL +   VY WGK
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLSE--TVVSDVSVGAQHCVALTTDSDVYAWGK 745



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 18/264 (6%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            GR+   + ++  VFS G    G LGHG       S+ R   I    A H+ +VS    H+
Sbjct: 3021 GRHVLAVTADGKVFSWGDGQYGQLGHG----SLQSYDRPKMIEIFQAKHIREVSCGTGHS 3076

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-LNFTGFLTIR 234
            A V  +G++FT G  +    GH D+N    +P+LV AL+ V    V  G  N        
Sbjct: 3077 AAVSVNGELFTWGQGADGRLGHGDSNNQT-KPKLVRALEKVRISCVACGSRNAHTLAAGD 3135

Query: 235  GHVHTCGSNTHGQLGHGD---TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              +   G  + G+LG  D   + D P      P     +++QI  G  + + +T  G VY
Sbjct: 3136 NSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFP----SNIIQIECGMHFSVLLTKEGKVY 3191

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            ++G G  + LG+     +  P  +     K I   +V+ G  H +AL SSG VY+WG   
Sbjct: 3192 TWGKGEYYRLGNDSTSVQPIPTLVDGLASKTI--TQVAVGALHCLALTSSGEVYSWGDNE 3249

Query: 352  CGALGHGDEIDKTLPEPLSSLKSH 375
             G  G+   I    P+ ++SLK H
Sbjct: 3250 HGQQGNNSTICNRKPQIVASLKGH 3273



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 5/146 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G  ++G LG G+T  +  P ++A L     +V I+AG  +  AVT +GV+
Sbjct: 523 LTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSG-DRIVHISAGSMHSAAVTEDGVL 581

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWG 348
           Y++G GS   LGHG   D+L P  ++     G+ +V+V   +GD H +ALD +G V++WG
Sbjct: 582 YTWGKGSYGRLGHGNAEDKLIPTIVEGL--NGVKIVQVDCGSGDAHTLALDDTGQVWSWG 639

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKS 374
            G  G LG        +P+P+S + S
Sbjct: 640 DGDYGKLGRPGSDQNKVPKPISGIGS 665



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 9/269 (3%)

Query: 113  NMQITTGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQ 167
            N  + TG   TL  +  +  V++ G +  G LG G            +  +   A   + 
Sbjct: 3868 NPAMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIA 3927

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            + +   H   V   G+++  G+      G   T   +  P L+E+LK         G + 
Sbjct: 3928 IHSGGKHCLAVTTQGELYAWGEGEDGKLG-LGTTVNMNVPHLIESLKSKHVIDAGCGSSH 3986

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTG 286
            +  +T  G ++T G   +G+LGH D   +  PK ++ L+ E  + V   +G +  L  T 
Sbjct: 3987 SACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATA 4046

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P+ I +    G HV+++  G +  +AL ++G+VYT
Sbjct: 4047 SGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSL--TGKHVIKLLCGSQFSMALTTAGHVYT 4104

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            WGKG    LGHGD+  +  P  +  L +H
Sbjct: 4105 WGKGDYYRLGHGDDSHQRTPRRVLGLLAH 4133



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 4/111 (3%)

Query: 271 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           ++QI   PS  ++LA+T +G VYS+G GSN  LG G    +  P A+      G  +V +
Sbjct: 508 IIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAAL--SGDRIVHI 565

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           SAG  H  A+   G +YTWGKG  G LGHG+  DK +P  +  L     VQ
Sbjct: 566 SAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQ 616



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 7/250 (2%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
            S  SVF  G +  G LG G E  +  S       S  +   ++  E     V   G+V+ 
Sbjct: 3832 STFSVFGWGHNHRGQLG-GIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYA 3890

Query: 187  CG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGS 242
             G   +     G  D N     P    A +G+  K++   +G      +T +G ++  G 
Sbjct: 3891 SGYAAHGRLGIGSSD-NVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
               G+LG G T++   P  I  L+    V+    G S+   +T +G +Y++G G    LG
Sbjct: 3950 GEDGKLGLGTTVNMNVPHLIESLKS-KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLG 4008

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            H +   + +P+ +   + + +  V   +GD   +   +SG V++WG G  G LG G    
Sbjct: 4009 HNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEG 4068

Query: 363  KTLPEPLSSL 372
              +P+ + SL
Sbjct: 4069 SKVPKKIDSL 4078



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 7/199 (3%)

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT- 222
            H +Q +     +  V   G+VF CG+ SS   G       I  P  + +L     ++V  
Sbjct: 2959 HPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFAN-IRMPHQISSLSMYVVRKVAV 3017

Query: 223  --AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
              AG +    +T  G V + G   +GQLGHG       PK I  + +   + +++ G  +
Sbjct: 3018 SCAGRHVLA-VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGH 3075

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
              AV+ NG ++++G G++  LGHG+ +++ +P+ ++   +  I  V   + + H +A   
Sbjct: 3076 SAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGD 3135

Query: 341  SGYVYTWGKGYCGALGHGD 359
            +  ++ WG G  G LG  D
Sbjct: 3136 NS-LWAWGDGSFGKLGLKD 3153



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 13/228 (5%)

Query: 119  GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-----ASE 172
            G  H+  I++  S+++ G    G LGH    TQ     +    SA    QV+     + +
Sbjct: 3983 GSSHSACITDDGSLYTWGKGRYGRLGHNDHETQ----HKPKLVSALKGEQVTCVACGSGD 4038

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                    SG VF+ GD      G R  N     P+ +++L G    ++  G  F+  LT
Sbjct: 4039 AQTLCATASGCVFSWGDGDYGKLG-RGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALT 4097

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              GHV+T G   + +LGHGD   + TP+ +  L    +V+ I  G  + +  T +G V+S
Sbjct: 4098 TAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFS 4157

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G      +G+        P+ I       I +  V+ G  H +A  S
Sbjct: 4158 WGDNDEGQIGNDTTQAVSVPKRINI--TDNICIDHVACGSAHSIAWSS 4203


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 131/264 (49%), Gaps = 14/264 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 188
            V++CG +  G LG G  +       +I   S+  V  V V +   HA  +   G+VF+ G
Sbjct: 2953 VYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWG 3012

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+L
Sbjct: 3013 EGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3071

Query: 249  GHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G 
Sbjct: 3072 GHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3129

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++    
Sbjct: 3130 SEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK 3187

Query: 366  PEPLSSLKS----HLAVQGLSVLA 385
            P+ +  L+     H+AV  L  LA
Sbjct: 3188 PQVVEGLRGKKIVHVAVGALHCLA 3211



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG  +  C    
Sbjct: 3970 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPR 4023

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4024 VIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4082

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4083 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4141

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4142 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4199

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4200 HCVCCTEDGEVYTWGDNDEGQLGDG 4224



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2996 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3054

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3055 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3113

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3114 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3172

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3173 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3230

Query: 357  HG 358
            +G
Sbjct: 3231 NG 3232



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+GV    V AG 
Sbjct: 3982 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGVEVVDVAAGG 4040

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4041 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4099

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4100 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4157

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4158 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4193



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2958

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2959 ATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3018

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3019 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3076

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3077 TTQLKPKMVKVLLGHRVIQ 3095



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2930 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYMV 2987

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2988 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3046

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3047 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3104

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3105 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL 3142



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 25/276 (9%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 423 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 478

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 214
           +    +  HVV ++    ++A +   G+++T G  +     H R     I    ++  L 
Sbjct: 479 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILI--MISGLD 532

Query: 215 GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                  + G+ F   L     G V + G   +G+LG G +    TPK I  L+++  VV
Sbjct: 533 RQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVV 591

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           ++  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG 
Sbjct: 592 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGS 649

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            H +AL     V++WG        H D +  T PEP
Sbjct: 650 THCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 683



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3968 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 4027

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4028 LRGV-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4086

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4087 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4134



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 478

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   + +L HG +        I+ L+    + 
Sbjct: 479 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIY 538

Query: 273 QIAAGPSY--MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + + G  +   LA   NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 539 K-SCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 595

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 596 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 638



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3044 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3102

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3103 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3161

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3162 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3220

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3263



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3947

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3948 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4007

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG       P  + SL+
Sbjct: 4008 DGKLGHGSRSPCDRPRVIESLR 4029



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4092 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4150

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4151 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4209

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4210 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4255



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3104 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 3162

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3163 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3221

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3222 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3265



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           N  V+S G    G LG G  +  C +   I       VV+V      +  + + GQV++ 
Sbjct: 554 NGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G   +   GH  T   +  P+L+E L+G     V AG      LT    VH+ GSN   Q
Sbjct: 613 GKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671

Query: 248 LGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 672 --HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 706



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 384 VTQIACAEKRFLILSRNGCVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 433

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 434 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 480


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTMEKDRI 310



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 8/194 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 379 QGLSVLAEVCPTIV 392
             ++     C  +V
Sbjct: 208 VTIACGQMCCMAVV 221


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4293



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4143

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV-HT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G V   
Sbjct: 4144 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4202

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4261

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4262 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4318



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 141/323 (43%), Gaps = 62/323 (19%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT----FRRK------------------------ 321
           V+SFG G N  LGHG+ +   +P+ I+     F RK                        
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA 642

Query: 322 ---------------------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
                                   +V +S GD H +AL     VY WG    G  G G+ 
Sbjct: 643 CLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 361 IDK-TLPEPLSSLKSHLAVQGLS 382
               T P+ +S L   +A+Q +S
Sbjct: 703 TGPITKPKKVSGLDG-IAIQQIS 724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4022 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4081

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4139

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4140 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4178



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4129 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4187

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G V   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4188 NHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4244

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4245 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4302

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4303 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4349



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4182 QVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4240

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4241 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4296

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4297 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4355



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTVEKDRI 310



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S+    +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASL-SYGSGPHIVLATT-E 117

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ W
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAW 176

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
           G    G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 221



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 58  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSG-PHIVLATT 116

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            G V+TWG      LG+G      +P  +S+
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST 147


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 4286



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV-HT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G V   
Sbjct: 4137 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4195

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4254

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 4255 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4311



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 141/323 (43%), Gaps = 62/323 (19%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT----FRRK------------------------ 321
           V+SFG G N  LGHG+ +   +P+ I+     F RK                        
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA 642

Query: 322 ---------------------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
                                   +V +S GD H +AL     VY WG    G  G G+ 
Sbjct: 643 CLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 361 IDK-TLPEPLSSLKSHLAVQGLS 382
               T P+ +S L   +A+Q +S
Sbjct: 703 TGPITKPKKVSGLDG-IAIQQIS 724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4015 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4074

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4132

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4133 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4171



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4122 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4180

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G V   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4181 NHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4237

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4238 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4295

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4296 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4342



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4175 QVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4233

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4234 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4289

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4290 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4348



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 306 TPVTVEKDRI 315



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S+    +GP  +LA T  
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASL-SYGSGPHIVLATT-E 122

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ W
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAW 181

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
           G    G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 182 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 226



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 63  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSG-PHIVLATT 121

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 122 EGEVFTWGHNAYSQLGNG 139


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 131/265 (49%), Gaps = 14/265 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             V++CG +  G LG G  +       +I   S+  V  V V +   HA  +   G+VF+ 
Sbjct: 2650 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSW 2709

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 2710 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 2769 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2826

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 2827 GSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2884

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 2885 KPQVVEGLRGKKIVHVAVGALHCLA 2909



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG  +  C    
Sbjct: 3668 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPR 3721

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3722 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3780

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3781 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLG-VVK 3839

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3840 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3897

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3898 HCVCCTEDGEVYTWGDNDEGQLGDG 3922



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2694 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2752

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2753 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2811

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2812 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2870

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2871 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2928

Query: 357  HG 358
            +G
Sbjct: 2929 NG 2930



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 3680 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 3738

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3739 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3797

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3798 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSL--TGLGVVKVECGSQFSVALTKSGA 3855

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3856 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 3891



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQ----AGKHVVHIA 246

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 247 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 305

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 306 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 364

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 365 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 422

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 423 GSN--DQCQHFDTLRVTKPEP 441



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+ + A  G 
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKAISAFSGK 236

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 237 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 295

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 296 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 353

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 354 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 396



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 190

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK+I+    ++ G  VV IA G +
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGST 250

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 251 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 308

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 309 VTENGQVWSWGDGDYGKLGRG 329



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2656

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2657 ATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2716

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2717 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2774

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 2775 TTQLKPKMVKVLLGHRVIQ 2793



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2628 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYMV 2685

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2686 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2744

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2745 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2802

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2803 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL 2840



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3666 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 3725

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3726 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3784

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 3785 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSL 3832



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2742 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2800

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2801 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2859

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2860 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2918

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2961



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3645

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3646 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3705

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG       P  + SL+
Sbjct: 3706 DGKLGHGSRSPCDRPRVIESLR 3727



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C   T+I+  +   VV+V      + 
Sbjct: 3790 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPTKIDSLTGLGVVKVECGSQFSV 3848

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3849 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3907

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3908 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3953



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 359

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 418

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 419 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 464



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2802 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 2860

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2861 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2919

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2920 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2963



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 191

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 192 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQA 238


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTVEKDRI 310



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 8/194 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 379 QGLSVLAEVCPTIV 392
             ++     C  +V
Sbjct: 208 VTIACGQMCCMAVV 221


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVIQPRLVEAMASTTVDFVACG 339

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAVVEV 456

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    SS  ++TWG G    LGHGD+  +  P  +S L
Sbjct: 457 IVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLL 498



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 20/275 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 336 VACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCG 394

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 395 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTIAVACGVWHTAAV 453

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                           + T G     +LGHGD   R  P  ++ L +  +  +IA G S 
Sbjct: 454 VEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLID-SNFHRIACGHSL 512

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 513 TVGLTTSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGESVEEIACGAYHVAVLTS 570

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              VYTWGKG  G LGHGD  D+  P  + +LK  
Sbjct: 571 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR 605



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI S   +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           S ++FT GD      GH D +  +  P  V  L      ++ 
Sbjct: 449 HTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL-EPTCVSLLIDSNFHRIA 507

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS+ +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGEVFTMGSSVYGQLGNPQS-DGKVPCLVKDKLAGESVEEIACGAYHVA 566

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 567 VLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAI 620



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 7/202 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVE 326

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV 378
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P   E LS L++    
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 379 QGLSVLAEVCPTIVQEDTRSCS 400
            G+   A V   IV + + S S
Sbjct: 445 CGVWHTAAVVEVIVTQSSASVS 466


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3017 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3075

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3076 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3134

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3135 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3192

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3193 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3250

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3251 RKPQVVEGLRGKKIVHVAVGALHCLA 3276



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4148 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG 4289



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3061 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3119

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3120 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3178

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3179 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3237

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3238 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3295

Query: 357  HG 358
            +G
Sbjct: 3296 NG 3297



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4106 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4258



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 444

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 445 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 496

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 555

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 556 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 614

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 615 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 672

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 673 DSEVHSWGSN--DQCQHFDTLRVTKPEP 698



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGK 493

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 494 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 552

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 553 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 610

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 653



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2965 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3023

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3024 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3083

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3084 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3141

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3142 TTQLKPKMVKVLLGHRVIQ 3160



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2995 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3052

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3053 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3111

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3112 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3169

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3170 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3207



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4151

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4199



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3109 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3167

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3168 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3226

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3227 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3285

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3328



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLR 4094



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4320



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 616

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 721



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3169 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3227

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3228 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3286

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3287 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3330



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 448

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 449 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 495


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3016 KVYACGEATNGRLGLGI-SSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3249

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3250 RKPQVVEGLRGKKIVHVAVGALHCLA 3275



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4036 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4089

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       +V V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4090 VIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4148

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4149 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4207

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4208 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4265

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4266 HCVCCTEDGEVYTWGDNDEGQLGDG 4290



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4048 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIELVDVAAGG 4106

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4107 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4165

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4166 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4223

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4224 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4259



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 127/277 (45%), Gaps = 16/277 (5%)

Query: 102  HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            +S  ++   A  + I  G +    +   +V S GS  C   G G    +  SF+     S
Sbjct: 2940 NSGSLIRKKAAGLGIQRGPWTPFGVGQGAV-STGSLCCD--GVGLSQIKVPSFSETL--S 2994

Query: 162  AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            A +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     K
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQVTALSSYVVK 3052

Query: 220  QVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            +V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G
Sbjct: 3053 KVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACG 3111

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHV 335
             S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D   
Sbjct: 3112 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQT 3169

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3170 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3206



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 5/190 (2%)

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            S CC     ++ I  P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G
Sbjct: 2973 SLCCDGVGLSQ-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 3031

Query: 252  -DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
              +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  LGH  + + 
Sbjct: 3032 ISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 3091

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +
Sbjct: 3092 DKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV 3149

Query: 370  SSLKSHLAVQ 379
              L  H  +Q
Sbjct: 3150 KVLLGHRVIQ 3159



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4034 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4093

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  +V +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4094 LRGI-ELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4152

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4153 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4200



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4013

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4014 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4073

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4074 DGKLGHGNRSPCDRPRVIESLR 4095



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4158 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4216

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4217 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4275

Query: 237  VHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T  + RP    + P  +   V ++A G ++ LA
Sbjct: 4276 VYTWGDNDEGQLGDGTTNAIQRP---RLVPALQGKKVNRVACGSAHTLA 4321



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3227 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3285

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 21/260 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QVS    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG  DE ++  P  L +L++
Sbjct: 230 LGLNDETNRAYPTQLKTLRT 249



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 15/262 (5%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA-GPSYMLAVTG 286
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G  V+ AA G  + + +T 
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG--VRFAACGDEFSVFLTN 267

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVY 345
            G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +A   S G VY
Sbjct: 268 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLAFVPSRGKVY 325

Query: 346 TWGKGYCGALGHGDEIDKTLPE 367
            +G G  G LG        LP+
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+     + GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--AACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGHG   ++ LP  +  L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMEL 299



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  +    G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFAACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3246

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3247 RKPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4256



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4197



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLR 4092



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 128/272 (47%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  I+ S  +++ G      G+LGHG  T+  +   R++ P     V+ VS  
Sbjct: 300 VACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLP-KRVSGPLEGVQVLSVSCG 358

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+VFT GD +    GH + +   + P+ VE L G    +V  GL      
Sbjct: 359 SWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAY-PKEVETLSGFRTIKVACGLWHSAAI 417

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N  G   I   + T G+     LGHGD   R  P  +  L +  +  Q+A G S  
Sbjct: 418 VETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDY-NFHQVACGHSMT 476

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A++ +G V++ GS SN  LG+  + D   P  +Q  R  G  V  +S G  HV  L S 
Sbjct: 477 IALSTSGHVFTMGSSSNGQLGN-PKSDGKHPTPVQD-RLAGELVEEISCGSCHVAVLTSR 534

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 535 SEVYTWGMGANGRLGHGGVEDKKKPTLVEALK 566



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + V  G
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYVACG 303

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G   +  G LGHG       PK ++ PLE V  V+ ++ G  + 
Sbjct: 304 EFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGV-QVLSVSCGSWHS 362

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
              T +G V++FG G+   LGHG +H    P+ ++T    G   ++V+ G  H  A+   
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETL--SGFRTIKVACGLWHSAAIVET 420

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    S  ++TWG G    LGHGD+  + +P  + SL
Sbjct: 421 TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSL 461



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 12/197 (6%)

Query: 182 GQVFT----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           G+V+T       ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V
Sbjct: 209 GEVWTDMIPAEGSANYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEV 264

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG- 296
              G    G+LGHG   D   PK +  L  V +V  +A G  +  A+T +G +Y++G G 
Sbjct: 265 FAWGEELGGRLGHGTDADISRPKLVEALA-VSNVEYVACGEFHTCAITASGDLYTWGDGY 323

Query: 297 -SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            +   LGHG       P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GAL
Sbjct: 324 YNAGLLGHGAGTSHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGAL 382

Query: 356 GHGDEIDKTLPEPLSSL 372
           GHG+      P+ + +L
Sbjct: 383 GHGNRHTVAYPKEVETL 399



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS-FTRINFPSA-A 163
           + ++ G +H+ L ++S  VF+ G    G LGHG       P+  + +S F  I       
Sbjct: 353 LSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLW 412

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H   +  + N A   + S ++FT G       GH D +  +  P  V++L      QV  
Sbjct: 413 HSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLV-PTCVQSLIDYNFHQVAC 471

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  L+  GHV T GS+++GQLG+  +  + PTP       E+  V +I+ G  ++ 
Sbjct: 472 GHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGEL--VEEISCGSCHVA 529

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            +T    VY++G G+N  LGHG   D+ +P  ++  + +  HV  ++ G
Sbjct: 530 VLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDR--HVKSIACG 576


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3007 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3065

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3066 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3124

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3125 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3182

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3183 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3240

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3241 RKPQVVEGLRGKKIVHVAVGALHCLA 3266



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4025 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4078

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4079 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4137

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4138 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4196

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4197 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4254

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4255 HCVCCTEDGEVYTWGDNDEGQLGDG 4279



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3051 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3109

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3110 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3168

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3169 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3227

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3228 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3285

Query: 357  HG 358
            +G
Sbjct: 3286 NG 3287



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4037 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4095

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4096 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4154

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4155 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4212

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4213 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4248



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2955 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3013

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3014 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3073

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3074 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3131

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3132 TTQLKPKMVKVLLGHRVIQ 3150



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2985 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3042

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3043 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3101

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3102 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3159

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3160 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3197



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4023 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4082

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4083 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4141

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4142 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4189



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3099 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3157

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3158 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3216

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3217 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3275

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3318



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4002

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4003 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4062

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4063 DGKLGHGNRSPCDRPRVIESLR 4084



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4147 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4205

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4206 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4264

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4265 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4310



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3159 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3217

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3218 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3276

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3277 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3320



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2990 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3048

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3049 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3107

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3108 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3165

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3166 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3223

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3224 RKPQVVEGLRGKKIVHVAVGALHCLA 3249



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4010 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4063

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4064 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4122

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4123 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4181

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4182 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4239

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4240 HCVCCTEDGEVYTWGDNDEGQLGDG 4264



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3034 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3092

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3093 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3151

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3152 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3210

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3211 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3268

Query: 357  HG 358
            +G
Sbjct: 3269 NG 3270



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4022 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4080

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4081 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4139

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4140 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4197

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4198 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4233



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 535

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 536 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 594

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 595 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 653

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 654 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 711

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 712 GSN--DQCQHFDTLRVTKPEP 730



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++++++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 525

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 526 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 584

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 585 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 642

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 643 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 685



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2938 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2996

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2997 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3056

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3057 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3114

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3115 TTQLKPKMVKVLLGHRVIQ 3133



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2968 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3025

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3026 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3084

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3085 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3142

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3143 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3180



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 479

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 597

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 598 VTENGQVWSWGDGDYGKLGRG 618



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4008 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4067

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4068 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4126

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4127 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4174



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3082 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3140

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3141 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3199

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3200 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3258

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3301



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3987

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3988 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4047

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4048 DGKLGHGNRSPCDRPRVIESLR 4069



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4132 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4190

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4191 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4249

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4250 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4295



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 590 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 648

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 649 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 707

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 708 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 753



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3142 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3200

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3201 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3259

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3260 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3303



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 480

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 481 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 527


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2542

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2543 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2601

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2658

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2716

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 2717 GQDRLIGLPEGRARNHNRPQQIPVL-AGMIIEDVAVGAE 2754



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 2546 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 2604

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 2605 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 2663

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 2664 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 2722

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 2723 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 2779



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 2483 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 2542

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 2543 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 2600

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 2601 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 2639



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 2590 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 2648

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 2649 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 2705

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 2706 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 2763

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 2764 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 2810



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 2643 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 2701

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 2702 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 2757

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 2758 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 2816


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3013 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3072 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3189 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4061 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4114

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4115 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4173

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4174 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4232

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4233 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4290

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4291 HCVCCTEDGEVYTWGDNDEGQLGDG 4315



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4073 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4131

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4132 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4190

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4191 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4248

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4249 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4284



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4059 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4118

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4119 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4177

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4178 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4225



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4038

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4039 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4098

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4099 DGKLGHGNRSPCDRPRVIESLR 4120



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4183 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4241

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4242 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4300

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4301 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4346



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3246

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3247 RKPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4256



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 7/170 (4%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4147

Query: 325  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4197



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLR 4092



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3246

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3247 RKPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4256



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++++++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4197



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLR 4092



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2708 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2766

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 2767 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2825

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 2826 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2883

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 2884 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 2941

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 2942 RKPQVVEGLRGKKIVHVAVGALHCLA 2967



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3726 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3779

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3780 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3838

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3839 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3897

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3898 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3955

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3956 HCVCCTEDGEVYTWGDNDEGQLGDG 3980



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2752 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2810

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2811 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2869

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2870 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2928

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2929 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2986

Query: 357  HG 358
            +G
Sbjct: 2987 NG 2988



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3738 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3796

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3797 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3855

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3856 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3913

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3914 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 3949



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2656 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2714

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2715 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2774

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2775 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2832

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 2833 TTQLKPKMVKVLLGHRVIQ 2851



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2686 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2743

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2744 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2802

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2803 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2860

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2861 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 2898



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3724 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3783

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3784 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3842

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 3843 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 3890



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 21/189 (11%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P   E L  +   Q+         L+  G V+T   N+       DTL    P+ + 
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-------DTL---APQLVQ 443

Query: 264 PLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--R 319
            L    ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  +
Sbjct: 444 GLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 502

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           + G HVV ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK      
Sbjct: 503 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLK------ 556

Query: 380 GLSVLAEVC 388
           GL V+   C
Sbjct: 557 GLKVIDVAC 565



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 456

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 457 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 516

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 517 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 574

Query: 338 L 338
           +
Sbjct: 575 V 575



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2800 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2858

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2859 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2917

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2918 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2976

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3019



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3703

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3704 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3763

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3764 DGKLGHGNRSPCDRPRVIESLR 3785



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3848 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3906

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3907 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3965

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3966 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4011



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2860 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2918

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2919 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2977

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2978 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3021


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3020 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3078

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3079 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3137

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3138 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3195

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3196 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3253

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3254 RKPQVVEGLRGKKIVHVAVGALHCLA 3279



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4040 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4093

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4094 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4152

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4153 HHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4211

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4212 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4269

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4270 HCVCCTEDGEVYTWGDNDEGQLGDG 4294



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3064 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3122

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3123 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3181

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3182 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3240

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3241 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3298

Query: 357  HG 358
            +G
Sbjct: 3299 NG 3300



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4052 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4110

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4111 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4169

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4170 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4227

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4228 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4263



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2968 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3026

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3027 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3086

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3087 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3144

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3145 TTQLKPKMVKVLLGHRVIQ 3163



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2998 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3055

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3056 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3114

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3115 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3172

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3173 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3210



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 7/170 (4%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4038 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4097

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4098 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4154

Query: 325  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4155 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4204



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3112 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3170

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3171 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3229

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3230 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3288

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3331



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4017

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4018 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4077

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4078 DGKLGHGNRSPCDRPRVIESLR 4099



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4162 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4220

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4221 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4279

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4280 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4325



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3172 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3230

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3231 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3289

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3290 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3333



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3006 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3064

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3065 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3124 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3181

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3182 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3239

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3240 KPQVVEGLRGKKIVHVAVGALHCLA 3264



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3972 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4025

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4026 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4084

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4085 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4143

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4144 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4201

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4202 HCVCCTEDGEVYTWGDNDEGQLGDG 4226



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3049 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3107

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3108 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3166

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3167 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3225

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3226 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3283

Query: 357  HG 358
            +G
Sbjct: 3284 NG 3285



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3984 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4042

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4043 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4101

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4102 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4159

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4160 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4195



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2953 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3011

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3012 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3071

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3072 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3129

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3130 TTQLKPKMVKVLLGHRVIQ 3148



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2983 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3040

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3041 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3099

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3100 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3157

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3158 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3195



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4030 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4088

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4089 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4136



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3097 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3155

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3156 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3214

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3215 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3273

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3316



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4094 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4152

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4153 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4211

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4212 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4257



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3157 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3215

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3216 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3274

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3275 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3318



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 312  PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            P  +++ +   I  V V++G +H +AL S G VY+WG+   G LGHG+      P  + S
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 372  LK 373
            L+
Sbjct: 4030 LR 4031


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
           V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 606 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 664

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 665 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 724 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 781

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                  P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 782 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 839

Query: 365 LPEPLSSLKS----HLAVQGLSVLA 385
            P+ +  L+     H+AV  L  LA
Sbjct: 840 KPQVVEGLRGKKIVHVAVGALHCLA 864



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 1623 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 1676

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 1677 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 1735

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 1736 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1794

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1795 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1852

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 1853 HCVCCTEDGEVYTWGDNDEGQLGDG 1877



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 649 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 707

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 708 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 766

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 767 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 825

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 826 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 883

Query: 357 HG 358
           +G
Sbjct: 884 NG 885



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1635 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1693

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 1694 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 1752

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1753 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1810

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 1811 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 1846



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 553 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 611

Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 612 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 671

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 672 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 729

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
             +  P+ +  L  H  +Q
Sbjct: 730 TTQLKPKMVKVLLGHRVIQ 748



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 583 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 640

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 641 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 699

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 700 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 757

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 758 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 795



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1621 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 1680

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1681 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 1739

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 1740 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 1787



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 697 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 755

Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 756 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 814

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 815 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 873

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 874 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 916



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1600

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1601 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 1660

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 1661 DGKLGHGNRSPCDRPRVIESLR 1682



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1745 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1803

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1804 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1862

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1863 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1908



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 757 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 815

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 816 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 874

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 875 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 918


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 2717 VYACGEATNGRLGLG-MSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2775

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 2776 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2834

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 2835 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2892

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 2893 GSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2950

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 2951 KPQVVEGLRGKKIVHVAVGALHCLA 2975



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P + + L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEAL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D + +T PEP
Sbjct: 728 DSEVHSWGNN--DQCQHFDTLHQTKPEP 753



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2760 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2818

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2819 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2877

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2878 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2936

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2937 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2994

Query: 357  HG 358
            +G
Sbjct: 2995 NG 2996



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 16/220 (7%)

Query: 164 HVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G    
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGKQAG 551

Query: 220 Q----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+ +A
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVA 610

Query: 276 --AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
             +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  G +
Sbjct: 611 CGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRCGSQ 668

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VAL   G VY+WGKG    LGHG E     P+ L +L+
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQ 708



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 155  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            T I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPI-- 2739

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            PR V AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  
Sbjct: 2740 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 2799

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 2800 LK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 2856

Query: 325  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2857 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL 2906



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 4/175 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
            P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ +  L
Sbjct: 2687 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTAL 2746

Query: 266  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
               V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 2747 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 2806

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
               ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +Q
Sbjct: 2807 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 2859



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 50/239 (20%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G     + AG 
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGTEVVDIAAGG 3779

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3780 AHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 3838

Query: 284  VTGNGVVYSFGSG---------SNFC---------------------------------- 300
            +T +  V+S+G G         S+ C                                  
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYH 3898

Query: 301  -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    G LG G
Sbjct: 3899 RLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDG 3955



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            V + +G  + LA++  G VYS+G   +  LGHG +    +PR +++ R  G  VV ++AG
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GTEVVDIAAG 3778

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              H   + S+G +YTWGKG  G LGH D  D+  P+ + +L+ H  V
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3825



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 3/154 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ +  
Sbjct: 3707 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 3766

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     VV IAAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3767 LRGT-EVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3825

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             V   +GD   + L     V++WG G  G LG G
Sbjct: 3826 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3859



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2866

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2867 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2925

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2926 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2984

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2985 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3027



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 110/275 (40%), Gaps = 50/275 (18%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L L S   V+S G +  G LGHG   + C     +       VV ++A 
Sbjct: 3720 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGTEVVDIAAG 3778

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T 
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTL 3837

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDT--------------LDRP-TPKSIAPLEEVG----- 269
             LT    V + G   +G+LG G +              + RP TP    P  +VG     
Sbjct: 3838 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDY 3897

Query: 270  -----------------------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
                                    V+ IA G  + +  T  G VY++G      LG G  
Sbjct: 3898 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTT 3957

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +   +PR +     +G  V RV+ G  H +A  +S
Sbjct: 3958 NAIQRPRLVAAL--QGRKVNRVACGSAHTLAWSTS 3990



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3686

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3687 ATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3746

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3747 DGKLGHGNRSPCDRPRVVESLR 3768



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2868 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 2926

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2927 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2985

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2986 GDNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3029



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 14/120 (11%)

Query: 262 IAPLEEVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           I P++  G     V QIA      L ++ NG VY+    S          D L P+ +Q 
Sbjct: 441 IGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQG 490

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              + I  +   +   H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
 gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
           1279]
          Length = 593

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 122/259 (47%), Gaps = 11/259 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYH+L L S  +V++ G +  G LG G  T    S   I  P  + V+ ++A +
Sbjct: 332 VAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQESPALI--PGLSDVIALAAGD 389

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H   +   G V+  GDN +   G  D   P   P  V  L GV  K + AG N +  L 
Sbjct: 390 DHTLALKADGSVWAWGDNPNGELGTGDIT-PYSVPTAVSNLPGV--KAIAAGGNHSVALL 446

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N HGQLG+G   +   P    P+  +  VV IAAG  + LAV  NG V +
Sbjct: 447 ADGTVRTWGYNNHGQLGNGSNTNSNVP---VPVTGLTDVVGIAAGYEFTLAVLSNGSVKA 503

Query: 293 FGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G   +F LG+G    D+  P  +Q     G  V  ++AG  H +AL   G +  WG   
Sbjct: 504 WGHDDSFQLGNGATTGDQTTPVDVQGI-PTGRSVRGLTAGIFHALALLDDGSMVAWGSNV 562

Query: 352 CGALGHGDEIDKTLPEPLS 370
            G LG G        +P+S
Sbjct: 563 QGQLGDGTPNSSDTAKPVS 581



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 130/297 (43%), Gaps = 37/297 (12%)

Query: 106 IVETSAGNMQITT---------------GRYHTLLISNSSVFSCGSSLCGVLGHG---PE 147
           IV+ S+GN+  T                G +   +  N  V+S G +  G LG     P 
Sbjct: 202 IVQASSGNLTRTAPLTLRVLRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPS 261

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTN---- 201
            +     + IN       V +S  E HA  +   G+V T G  D      G  D++    
Sbjct: 262 DSTPTQASLIN-----DAVSISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHT 316

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
            P  R  ++ A  G+    V AG   +  LT  G V+  G N  GQLG G T+  P  +S
Sbjct: 317 APNLRDNILPA--GIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLG-TITAPQ-ES 372

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
            A +  +  V+ +AAG  + LA+  +G V+++G   N  LG G+    + P ++ T    
Sbjct: 373 PALIPGLSDVIALAAGDDHTLALKADGSVWAWGDNPNGELGTGD----ITPYSVPTAVSN 428

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              V  ++AG  H VAL + G V TWG    G LG+G   +  +P P++ L   + +
Sbjct: 429 LPGVKAIAAGGNHSVALLADGTVRTWGYNNHGQLGNGSNTNSNVPVPVTGLTDVVGI 485


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 28/287 (9%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--AHVVQVSASENHAAFV 178
           +   L+    +++ G +  G LG G  T+  +       PS    HV  ++    H   +
Sbjct: 172 FSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRM---LPSMNHRHVHLMACGAAHIVVL 228

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             S  V+T G+NS    GH    +   +P+ V  + G+  KQ+ AG N +  +T  G ++
Sbjct: 229 TTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIY 288

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T G    GQLGHGD   +  P  ++PL+       I +G  +++A+T +G VYS+G    
Sbjct: 289 TWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCF 348

Query: 299 FCLGHG-EQH---------DELQPRAIQTF----RRKGIHVVRVSAGDEHVVAL-DSSGY 343
             LGHG + H         D + P+ I  F        I +  +S G  HV+A+ +    
Sbjct: 349 GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDT 408

Query: 344 VYTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           ++ WG+G  G LG    D   + +P+ +  +K      G+ VLA  C
Sbjct: 409 LFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMK------GMIVLAAAC 449



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 5/206 (2%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++   +H   +  SG++ + G   S   GH   +     P +++ L     K+V  G+ F
Sbjct: 114 ITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHS-STPSIIDELASQRVKEVACGVAF 172

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G ++T G N +GQLG GD      P+ +  +     V  +A G ++++ +T +
Sbjct: 173 SAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHR-HVHLMACGAAHIVVLTTS 231

Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
             VY++G+ S   LGHG +    LQP++++     G+ + ++ AG+ H   + S G +YT
Sbjct: 232 RDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVM--SGLDIKQIVAGENHSCVMTSFGDIYT 289

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
           WG+G  G LGHGD   K +P  LS L
Sbjct: 290 WGRGDFGQLGHGDMESKDIPTLLSPL 315



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 30/262 (11%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L ++  V++ G++  G LGHG     C+    +   S   + Q+ A ENH+  +   G 
Sbjct: 227 VLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGD 286

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ---VTAGLNFTGFLTIRGHVHTC 240
           ++T G       GH D       P L+  L   P  Q   + +G +F   +T  G V++ 
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDI-PTLLSPLD--PKTQASLIVSGADFIMAMTYSGAVYSW 343

Query: 241 GSNTHGQLGHGDTL----------DRPTPKSI---APLEE--VGSVVQIAAGPSYMLAVT 285
           G N  GQLGHG  +          D  +PK I   A  EE    S+  I+ G  ++LA+T
Sbjct: 344 GRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAIT 403

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH---VVALDSS 341
                ++++G G +  LG   +    +P   +  + KG+ V+  +  + H   V  +  S
Sbjct: 404 EKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGS 463

Query: 342 G-----YVYTWGKGYCGALGHG 358
           G      V++WG+G  G LG+G
Sbjct: 464 GPKGDMKVFSWGRGSFGQLGYG 485



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 7/155 (4%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           RP+ V +L G+  K +T G +    L   G + + G    GQLGH       TP  I   
Sbjct: 99  RPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSII--- 155

Query: 266 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +E+ S  V ++A G ++  A+   G +Y++G      LG G++     PR + +   + +
Sbjct: 156 DELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHV 215

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           H+  ++ G  H+V L +S  VYTWG    G LGHG
Sbjct: 216 HL--MACGAAHIVVLTTSRDVYTWGNNSYGQLGHG 248



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           G+ +  ++ G +HV+ALD+SG + +WG+G  G LGH      + P  +  L S 
Sbjct: 108 GLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELASQ 161


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3016 VYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3074

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EAL+    + +  G + +  LT  G ++T G   +G+
Sbjct: 3075 GEGDDGKLGHF-SRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3134 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3191

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3192 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3249

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3250 KPQVVEGLRGKKIVHVAVGALHCLA 3274



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRAKRIRDIACGSSHSAAL 3117

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3118 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3176

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3177 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3235

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3236 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3293

Query: 357  HG 358
            +G
Sbjct: 3294 NG 3295



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    +   A N   + G++   L S   V+S G +  G LGHG  +  C    
Sbjct: 4034 LLESIQHV--FIRKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPR 4087

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVE L+G
Sbjct: 4088 VVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQG 4146

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4147 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLG-VVK 4205

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4206 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4263

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4264 HCVCCTEDGEVYTWGDNDEGQLGDG 4288



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVVESLRGIEVVDVAAGG 4104

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDVACGSGDAQTLC 4163

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4257



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   VFS G    G LGHG       P+     S  +      
Sbjct: 500 AAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----GG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-EVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     PR ++     G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 22/225 (9%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+VF+  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDTV-PLEEPKVISAFSG- 547

Query: 217 PCKQ-------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             KQ       +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ + 
Sbjct: 548 --KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL- 604

Query: 270 SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
            V+ +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLEVVK 662

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           V  G +  VAL   G VY+WGKG    LGHG E     P  L  L
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGL 707



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3021

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3022 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3081

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  R K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3082 LGHFSRMNCDKPRLIEALRAKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3139

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3140 TTQLKPKMVKVLLGHRVIQ 3158



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2993 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3050

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     +  IA 
Sbjct: 3051 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALR-AKRIRDIAC 3109

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3110 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3167

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3168 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3205



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG       P+ +  
Sbjct: 4032 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVES 4091

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4092 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4151 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESL 4198



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3107 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3165

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3166 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3224

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3225 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3283

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3284 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3326



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG       P  + SL+
Sbjct: 4072 DGKLGHGSRSPCDRPRVVESLR 4093



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLEVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  PRL+E L G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I   +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIESLTGLGVVKVECGSQFSV 4214

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3167 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3225

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3226 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3284

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3285 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3328


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 2302 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2360

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 2361 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 2420 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2477

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 2478 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2535

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 2536 KPQVVEGLRGKKIVHVAVGALHCLA 2560



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3319 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3372

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3373 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3431

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3432 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3490

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3491 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3548

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3549 HCVCCTEDGEVYTWGDNDEGQLGDG 3573



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2345 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2403

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2404 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2462

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2463 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2521

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2522 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2579

Query: 357  HG 358
            +G
Sbjct: 2580 NG 2581



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3331 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3389

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3390 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3448

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3449 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3506

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3507 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 3542



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2249 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2307

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2308 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2367

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2368 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2425

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 2426 TTQLKPKMVKVLLGHRVIQ 2444



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2279 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2336

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2337 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2395

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2396 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2453

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2454 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 2491



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3317 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3376

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3377 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3435

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 3436 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 3483



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2393 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2451

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2452 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2510

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2511 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2569

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2570 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2612



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3296

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3297 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3356

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3357 DGKLGHGNRSPCDRPRVIESLR 3378



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3441 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3499

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3500 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3558

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3559 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3604



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2453 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2511

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2512 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2570

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2571 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2614


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3246

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3247 RKPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCSEDGEVYTWGDNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4256



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  VAL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 4/214 (1%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3986 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4044

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4103

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 V++WG G  G LG G      +P  + SL
Sbjct: 4164 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4197



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLR 4092



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 4/243 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  ITKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 364 TLP 366
           + P
Sbjct: 273 SYP 275



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 9/217 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 231
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYITKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G N + QLG+G T    +P  ++          +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVY 149

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G LG G   ++  P  +++L      QG+ V   VC
Sbjct: 209 NGQLGLGSSGNQPTPCRIAAL------QGIRVEQVVC 239



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 5/182 (2%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   ++T    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-FRR 320
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           K  H   V+ G  H + L   G VY WG    G +G G   ++ +P  ++S   +  V G
Sbjct: 127 KKAH--SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 381 LS 382
           ++
Sbjct: 185 IA 186



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 8/183 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +H+++++ +  V++ G +  G +G G    Q +     +      V+ ++  +  
Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMS 191

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  V+ +G+V+  G N +   G   + N+P   P  + AL+G+  +QV  G   T  LT 
Sbjct: 192 SMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVEQVVCGYAHTLALTD 249

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 291
            G ++  G+N++GQLG G+  ++  P  +   +E   +V+IAA  S     A + +G VY
Sbjct: 250 EGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKE--RIVEIAACHSSHTSAAKSQSGQVY 307

Query: 292 SFG 294
            +G
Sbjct: 308 MWG 310


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3011 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3069

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3070 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3128

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3129 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3186

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3187 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3244

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3245 RKPQVVEGLRGKKIVHVAVGALHCLA 3270



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4031 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4084

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4085 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4143

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4144 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4202

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4203 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4260

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4261 HCVCCSEDGEVYTWGDNDEGQLGDG 4285



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3055 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3113

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3114 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3172

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3173 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3231

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3232 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3289

Query: 357  HG 358
            +G
Sbjct: 3290 NG 3291



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4101

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4160

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4161 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4218

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4219 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4254



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  VAL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2959 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3017

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3018 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3077

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3078 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3135

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3136 TTQLKPKMVKVLLGHRVIQ 3154



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2989 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3046

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3047 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3105

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3106 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3163

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3164 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3201



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 4/214 (1%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3984 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4042

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4101

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4161

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 V++WG G  G LG G      +P  + SL
Sbjct: 4162 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4195



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3103 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3161

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3162 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3220

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3221 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3279

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3322



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4008

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4009 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4068

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4069 DGKLGHGNRSPCDRPRVIESLR 4090



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4153 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4211

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4212 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4270

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4271 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4316



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3163 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3221

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3222 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3280

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3281 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3324



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3246

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3247 RKPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCSEDGEVYTWGDNDEGQLGDG 4286



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4255



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 4/214 (1%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3985 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4043

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4102

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4162

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 V++WG G  G LG G      +P  + SL
Sbjct: 4163 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4196



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLR 4091



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3273 KVYACGEATNGRLGLG-LSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3331

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3332 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3390

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3391 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3448

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3449 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3506

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3507 RKPQVVEGLRGKKIVHVAVGALHCLA 3532



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4289 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4342

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       V  V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4343 VIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4401

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4402 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4460

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4461 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4518

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4519 HCVCCTEDGEVYTWGDNDEGQLGDG 4543



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4301 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVADVAAGG 4359

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4360 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4418

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4419 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4476

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4477 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4512



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3317 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3375

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3376 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3493

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3494 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3551

Query: 357  HG 358
            +G
Sbjct: 3552 NG 3553



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 127/271 (46%), Gaps = 15/271 (5%)

Query: 103  SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINF 159
            S +IV+ +A     + G ++  L +   V+S G    G LGHG   P     V  T    
Sbjct: 753  SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGK 808

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
             +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+   
Sbjct: 809  QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVI 867

Query: 220  QVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G
Sbjct: 868  DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCG 926

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +A
Sbjct: 927  SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLA 984

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            L     V++WG        H D +  T PEP
Sbjct: 985  LTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 1013



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++    G 
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISTFSGK 808

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 809 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 867

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 868 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 925

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 926 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 968



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3279

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3280 ATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3339

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3340 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3397

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3398 TTQLKPKMVKVLLGHRVIQ 3416



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     
Sbjct: 3251 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQVTALSSYVV 3308

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3309 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3367

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3425

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3426 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3463



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 714 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 762

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 763 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 823 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 880

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 881 VTENGQVWSWGDGDYGKLGRG 901



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4287 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4346

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  V  +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4347 LRGI-EVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4405

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4406 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4453



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4266

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4267 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4326

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4327 DGKLGHGNRSPCDRPRVIESLR 4348



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4411 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4469

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4470 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4528

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4529 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4574



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118  TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 873  SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 931

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 932  ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 990

Query: 237  VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 991  VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 1036



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3425 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3483

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3484 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3542

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3543 GDNDHGQQGNGTTTVNRKPTLVHGLEG-QKITRVACGSSHSVAWT 3586



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 714 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 763

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 764 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQA 810


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 32/293 (10%)

Query: 98  QSVEHSSD--IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-QCVSF 154
           Q VE  SD  I++  A N  ++       L  +  V++ G +  G+LGH   T+   +  
Sbjct: 68  QEVEKLSDRNIIKVKA-NKSVSMA-----LSQDGKVYTWGKNKGGILGHYDITSFNMIQP 121

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFR----- 206
             +       + Q+S    H A + Q G+++T G+      GH   + +N+   +     
Sbjct: 122 ELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQN 181

Query: 207 ---------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDR 256
                    P  V++L G+ CKQV+ G  FT  LT  G V++ G++  GQLG+  +    
Sbjct: 182 YDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGN 241

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             PK I  L+   +++ I  G  +  AV+ +G VY++G+  +  LG+ +   + +P  + 
Sbjct: 242 FQPKKIPDLQ---NIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVT 298

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            F   G  ++ +S GD  + AL + G ++TWG G  G LGH +  D   P+ +
Sbjct: 299 GF--GGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQI 349



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 33/307 (10%)

Query: 90  WKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS----SVFSCGSSLCGVLGHG 145
           ++++  F +   ++  +   S   + +T+G +   + +++    +V++ G    G LG  
Sbjct: 3   YQKMYNFFKQKTNTKRLFTAS---LLVTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLA 59

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPI 204
            E  Q  S   +   S  ++++V A+++ +  + Q G+V+T G N     GH D T+  +
Sbjct: 60  NENNQ-YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNM 118

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-------------- 250
            +P LVE L+ +  KQ++ G      ++  G ++T G+  HG+LGH              
Sbjct: 119 IQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRG 178

Query: 251 GDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GE 305
               D       P  +  L  +    Q++ G  + + +T NG VYSFG+     LG+  E
Sbjct: 179 NQNYDYAEGSMLPTKVQSLNGI-KCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSE 237

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           +    QP+ I   +    +++ +  G +   A+ SSG VYTWG    G LG+   I +  
Sbjct: 238 ETGNFQPKKIPDLQ----NIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQAR 293

Query: 366 PEPLSSL 372
           P  ++  
Sbjct: 294 PNQVTGF 300



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++  +L  N  V+S G+S+ G LG+  E T   +F     P   +++ +   +  +A V
Sbjct: 209 GQFTVVLTENGEVYSFGNSMKGQLGYQSEETG--NFQPKKIPDLQNIINIDCGQQFSAAV 266

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG+V+T G+N     G    N+ I+  RP  V    G     ++ G NF   L+  G 
Sbjct: 267 SSSGKVYTWGNNDH---GQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGK 323

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           + T G    GQLGH +  D   PK I   E+   ++++  G ++   +T N  +Y FG G
Sbjct: 324 LFTWGYGNDGQLGHSNRNDLYAPKQIEFKEK---IIKVDCGGTHTAFLTQNNQLYLFGRG 380

Query: 297 SNFCLGHGEQHD-----ELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   LG GE  +        P+ ++ F++  + VV V+ G E+ +A+
Sbjct: 381 NEGQLGIGENIESEAAIRTTPKIVEFFKK--MKVVDVTCGGEYTLAI 425


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3973 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4026

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  SG++FT G       GH D+   + +P+LV+AL+G
Sbjct: 4027 VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQG 4085

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4086 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4144

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4145 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4202

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4203 HCVCCTEDGEVYTWGDNDEGQLGDG 4227



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3985 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4043

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4044 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4102

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4103 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4160

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4161 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4196



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3018 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3076

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3077 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3135

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3136 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3194

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3195 DYFRLGHGTDVHVRKPQIVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3252

Query: 357  HG 358
            +G
Sbjct: 3253 NG 3254



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            +++CG +  G LG G  ++  +   R     + +VV+   V +   HA  +   G+VF+ 
Sbjct: 2975 IYACGEATNGRLGLG-LSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 3033

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  +T  G +++ G   +G+
Sbjct: 3034 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3093 LGHGDNTTQLRPKLVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3150

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3151 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3208

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3209 KPQIVEGLRGKKIVHVAVGALHCLA 3233



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 129/282 (45%), Gaps = 30/282 (10%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCG---SSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +S G  QI       L++S S +V++     ++L  +L HG  + + V       P   H
Sbjct: 400 SSTGVTQIVCSEKVFLILSRSGAVYTQNYKSTTLAPMLIHGLSSRKIVKLA--AHPDGQH 457

Query: 165 VVQVSASENHAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--- 219
            + +S S          G+V++  CGD      GH D    +  P L+    G       
Sbjct: 458 FLALSTS----------GEVYSWGCGDGGRL--GHGDATY-LEEPALITTFSGKQTGKQV 504

Query: 220 -QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--A 276
            Q+  G  ++  +T  G ++T G   +G+LGHG + D  TP  +  L+    VV +A  +
Sbjct: 505 VQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKG-QKVVDVACGS 563

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G +  LAVT NG V+S+G G    LG G       P+ ++    + + +V+V  G +  V
Sbjct: 564 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL--QDLDIVKVCCGSQFSV 621

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           AL   G VYTWGKG    LGHG +     P+ L SL+    V
Sbjct: 622 ALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVV 663



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2952 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKK 3011

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3012 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3070

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3071 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3128

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3129 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3164



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2980

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +     P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2981 ATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3040

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3041 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3098

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3099 TTQLRPKLVKVLLGHRVIQ 3117



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3971 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4030

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4031 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4089

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4090 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4137



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3066 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3124

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3125 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3183

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3184 KSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3242

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3243 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3285



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3950

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3951 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4010

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4011 DGKLGHGNRSPCDRPRVIESLR 4032



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3136 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3194

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3195 DYFRLGH-GTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGN 3253

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3254 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3287



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4095 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4153

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4154 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4212

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4213 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4258



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 17/189 (8%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   +       +V+V      + 
Sbjct: 563 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLVEKLQDLDIVKVCCGSQFSV 621

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T+  +  P+L+++L+G     +  G      LT  G 
Sbjct: 622 ALTKDGQVYTWGKGDNQRLGH-GTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGE 680

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           VH+ GSN   +L H DTL  ++  PK++  L     +V I+ GP         G  +++ 
Sbjct: 681 VHSWGSND--KLQHFDTLFPNKKQPKALPGLNS-KHIVGISCGP---------GQSFAWS 728

Query: 295 SGSNFCLGH 303
           S S + +G 
Sbjct: 729 SCSEWSVGQ 737


>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
 gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
          Length = 994

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   G +F  G+N+    G R        P+ +++L  +P  Q++A
Sbjct: 117 QVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 176

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  L++ G V   GSN+ GQLG GDT DR  P  +  L      V I+ G  +   
Sbjct: 177 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSG-KKTVSISCGGEHTAT 235

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSG 342
           ++  G V++FGSG    LGH    DE  PR +      G  V +V+ G  H +   DSS 
Sbjct: 236 LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVFEDSSN 293

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPL 369
            +Y++G G  G LG+G+++ +++P P+
Sbjct: 294 RIYSFGCGMQGQLGNGEQVKQSVPLPV 320



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 10/194 (5%)

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           ++G V    D            RP+      + L      Q+  G   +  L+  G +  
Sbjct: 86  EAGAVLLADDGKVLVMDQSTVCRPL------KGLDNRQVIQIACGDQHSMALSNDGLLFV 139

Query: 240 CGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N  GQLG   +     +P+ +  L E+  V QI+AG ++   ++ +GVV+ +GS S 
Sbjct: 140 WGENALGQLGLRKEQAGTQSPQHLQSLCEI-PVAQISAGGNHSFVLSLSGVVFGWGSNSA 198

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG G+  D   P  +++    G   V +S G EH   L   G V+T+G G  G LGH 
Sbjct: 199 GQLGLGDTTDRFIPTIVKSL--SGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHN 256

Query: 359 DEIDKTLPEPLSSL 372
              D+  P  ++ L
Sbjct: 257 SLKDEHHPRLVAEL 270



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 6/164 (3%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTR 156
           QS +H   + E      QI+ G  H+ ++S S V F  GS+  G LG G  T + +  T 
Sbjct: 158 QSPQHLQSLCEIPVA--QISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIP-TI 214

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S    V +S    H A + + G VFT G       GH ++ +    PRLV  L G 
Sbjct: 215 VKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGH-NSLKDEHHPRLVAELWGS 273

Query: 217 PCKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
              QVT G + T  F      +++ G    GQLG+G+ + +  P
Sbjct: 274 KVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVP 317


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 2238 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2296

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 2297 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2355

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 2356 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2413

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 2414 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2471

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 2472 KPQVVEGLRGKKIVHVAVGALHCLA 2496



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2281 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2339

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2340 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2398

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2399 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2457

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2458 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2515

Query: 357  HG 358
            +G
Sbjct: 2516 NG 2517



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3327

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQG-HRVVDVACGSGDAQTLC 3386

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3387 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3444

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3445 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 3480



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 13/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3257 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3310

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LV+AL+G
Sbjct: 3311 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVDALQG 3369

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3370 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3428

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3429 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3486

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G  YTWG    G LG G
Sbjct: 3487 HCVCCTEDGS-YTWGDNDEGQLGDG 3510



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2243

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2244 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2303

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2304 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2361

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 2362 TTQLKPKMVKVLLGHRVIQ 2380



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2215 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2272

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2273 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2331

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2332 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2389

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2390 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 2427



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 4/214 (1%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3210 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKK 3268

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L  +  VV +AAG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGG 3327

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ +   +   +  V   +GD   + L
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCL 3387

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 V++WG G  G LG G      +P  + SL
Sbjct: 3388 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 3421



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2329 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2387

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2388 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2446

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2447 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2505

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2506 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2548



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 3234

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3235 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3294

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3295 DGKLGHGNRSPCDRPRVIESLR 3316



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2389 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2447

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2448 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2506

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2507 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2550



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3379 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3437

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3438 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS 3496

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             +T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3497 -YTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3541


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3245

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3246 RKPQVVEGLRGKKIVHVAVGALHCLA 3271



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4253



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQ 3155



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3202



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4194



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLR 4089



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTMEKDRI 310



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S+    +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASL-SYGSGPHIVLATT-E 117

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ W
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAW 176

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
           G    G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 221



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 58  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSG-PHIVLATT 116

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G V+TWG      LG+G      +P  +S+  S+  V
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQV 154


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 128/266 (48%), Gaps = 17/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G +         I F S   +  V V +   HA  + Q G+VF+ 
Sbjct: 2975 KLYACGEGTNGRLGLG-DNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSW 3033

Query: 188  GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+      GH   NR  + +PRL+EALK    + +  G   +  +   G ++T G   +G
Sbjct: 3034 GEGEDGKLGH--GNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYG 3091

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGDT     PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG 
Sbjct: 3092 RLGHGDTTTHLKPKLVDAL--VGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGR 3149

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P  +   R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++   
Sbjct: 3150 GGSDGCYSPLPVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3207

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P  +  L+     H+AV  L  LA
Sbjct: 3208 RRPTLVEGLRGKKVVHVAVGALHCLA 3233



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 13/260 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3018 GKHALALTQDGKVFSWGEGEDGKLGHGNR----VSLDKPRLIEALKSKRIRDIACGSGHS 3073

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3074 AAIASNGELYTWGLGEYGRLGHGDTTTHL-KPKLVDALVGQRVIQVACGSRDAQTMALTE 3132

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    +P  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3133 DGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3191

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3192 GKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG 3249

Query: 354  ALGHGDEIDKTLPEPLSSLK 373
              G+G  +    P  + +L+
Sbjct: 3250 QQGNGSTMVNRKPSLVHNLE 3269



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 15/254 (5%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
            ++  V++ G    G LG G   +  V        S  HV    V V++   H   +   G
Sbjct: 3944 ADGKVYATGYGALGRLGTGGVDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSSEG 4000

Query: 183  QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
             V++ G+      GH   NR  + RP+L+EAL G     +  G + +  ++  G ++T G
Sbjct: 4001 HVYSWGEGDDGKLGH--GNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWG 4058

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 299
               +G+LGHGD+ D+  P  +  L+    V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4059 KGRYGRLGHGDSDDQLKPTVVTALQGY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4117

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             LG G       P  I++    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG 
Sbjct: 4118 KLGRGGSDGCKVPMKIESL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4175

Query: 360  EIDKTLPEPLSSLK 373
            +     P  +S+L+
Sbjct: 4176 DDHVRRPRKVSALQ 4189



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +++
Sbjct: 3972 LLESIQH------VFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----ITY 4021

Query: 155  TRINFPSA---AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R     A     +V ++   +H+A +  +G ++T G       GH D++  + +P +V 
Sbjct: 4022 DRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL-KPTVVT 4080

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+G     V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4081 ALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG 4140

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  +V ++
Sbjct: 4141 -VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSAL--QGKKIVSIA 4197

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G VYTWG    G LG G
Sbjct: 4198 TGSLHCVACSDKGEVYTWGDNDEGQLGDG 4226



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 13/272 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L +   V+S G+   G LGHG ++  C     I   S   V  ++    ++A +
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHG-DSFSCDEPQVIEVLSDRTVTYIACGSTYSAAI 568

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             +G++ T G  S    GH   +  I  P +V AL G     V   +G + T  +T  G 
Sbjct: 569 SSTGELLTWGRGSYGRLGHGICDD-ISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGI 627

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G +     PK +  L +  +VV++  G  +  A+T +G VY++G G
Sbjct: 628 VFSWGDGDYGKLGRGGSDGSKLPKIVDKLLD-QNVVKVFCGGQFSAALTAHGEVYTWGKG 686

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            ++ LGHG +     P+ ++  R K +    +S G+ H++A+     VY WG+       
Sbjct: 687 DHYRLGHGNEEHVRFPKLVEGLRNKKVR--DLSVGNLHILAITEDQLVYGWGR------N 738

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
              +ID +L   +S       + G SV+  VC
Sbjct: 739 DACQIDPSLGAVVSEPTLCPTLSGKSVIGLVC 770



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 14/235 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2941 SKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNN-VGEPK 2999

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    P+ I  L+
Sbjct: 3000 PIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALK 3059

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+    L+P+ +      G  V+
Sbjct: 3060 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDAL--VGQRVI 3116

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +V+ G  D   +AL   G VY+WG G  G LG G       P P+  L     VQ
Sbjct: 3117 QVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQ 3171



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 10/217 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA   +Q++  E     V   G+V+  G  +      G  D+   +  P L+E+++ V  
Sbjct: 3925 SALRPIQLAGGEQTLFAVTADGKVYATGYGALGRLGTGGVDS---VMVPTLLESIQHVFI 3981

Query: 219  KQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA 275
            K+V   +G      L+  GHV++ G    G+LGHG+ +    PK I  L  +G+ +V IA
Sbjct: 3982 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEAL--LGTEIVDIA 4039

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +  A++  G +Y++G G    LGHG+  D+L+P  +   +   +  V   +GD   
Sbjct: 4040 CGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQT 4099

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            + +     V++WG G  G LG G      +P  + SL
Sbjct: 4100 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL 4136



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 7/141 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3949

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3950 ATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4009

Query: 352  CGALGHGDEIDKTLPEPLSSL 372
             G LGHG+ I    P+ + +L
Sbjct: 4010 DGKLGHGNRITYDRPKLIEAL 4030



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 17/282 (6%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  IS++  +++ G    G LGHG    Q +  T +       V+ V+   
Sbjct: 4036 VDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQ-LKPTVVTALQGYKVIDVACGS 4094

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4095 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKVPMKIESLAGLGVVKVECGSQFSVA 4153

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G V+T G   + +LGHG       P+ ++ L+    +V IA G  + +A +  G V
Sbjct: 4154 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQG-KKIVSIATGSLHCVACSDKGEV 4212

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y++G      LG G  H +  PR +     +G ++ RV+ G  H +A  ++   ++    
Sbjct: 4213 YTWGDNDEGQLGDGTTHAQQSPRLVHAL--QGKNITRVACGSAHTLAWSTTKATHSL--- 4267

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE-VCPTI 391
                     E D     P S+L + L +  L   AE +CPT+
Sbjct: 4268 ---PAATPMEYDLVKDLPFSALHNRLVL--LHHFAELLCPTL 4304



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 5/140 (3%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 2980

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+ ++  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2981 EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 3040

Query: 355  LGHGDEIDKTLPEPLSSLKS 374
            LGHG+ +    P  + +LKS
Sbjct: 3041 LGHGNRVSLDKPRLIEALKS 3060



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L  + SV+S G    G LG G  +  C S   ++  +   VVQV      +  + + G+V
Sbjct: 3130 LTEDGSVYSWGDGDFGKLGRG-GSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEV 3188

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + RP LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3189 WTWGKGDYFRLGHGNDHH-VRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDND 3247

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G+G T+    P  +  LE+   V ++A G S+ +A
Sbjct: 3248 HGQQGNGSTMVNRKPSLVHNLED-AKVNRVACGSSHSIA 3285


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 4/243 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 364 TLP 366
           + P
Sbjct: 273 SYP 275



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 9/217 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 231
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSILEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G LG G   ++  P  +++L      QG+ V   VC
Sbjct: 209 NGQLGLGSSGNQPTPCRIAAL------QGIRVEQVVC 239



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 7/183 (3%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 319
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S   +  V 
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 380 GLS 382
           G++
Sbjct: 184 GIA 186



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 101/202 (50%), Gaps = 10/202 (4%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           L   + S++++   A  + +  G +H+++++ +  V++ G +  G +G G    Q +   
Sbjct: 115 LSPCQVSTNLINKKA--ISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRK 172

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK 214
             +      V+ ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+
Sbjct: 173 VTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRIAALQ 230

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+  +QV  G   T  LT  G ++  G+N++GQLG G+  ++  P  +   +E   +V+I
Sbjct: 231 GIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKE--RIVEI 288

Query: 275 AAGPS--YMLAVTGNGVVYSFG 294
           AA  S     A + +G VY +G
Sbjct: 289 AACHSSHTSAAKSQSGQVYMWG 310


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 28/287 (9%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G+ H+L +S   +++S G+   G LGH            I   S   + Q+S  ++H
Sbjct: 89  IACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   GQ+FT G N+    G  +       P+ V++L+G+P  QVTAG + +  L++ 
Sbjct: 149 CLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N+ GQLG  D   + TP  + PL     VV I+ G  +   +T  G +++FG
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQVKETPCHVKPL-RTHKVVYISCGEEHTAILTKAGGLFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G +  LGH   H+E+ PR +      G  V +++ G +H +A + SSG +Y +G G  G
Sbjct: 268 AGGSGQLGHDSLHNEINPRRV--LELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLG 325

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
            LG G E         +++K              CPT+V+    SCS
Sbjct: 326 QLGTGHE---------NNVK--------------CPTVVKGKWASCS 349



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 122/245 (49%), Gaps = 8/245 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L+ +  V+SCG +  G LGH  E T       +   +  H+  ++  ++
Sbjct: 38  EVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAPVATL---AEEHIKHIACGQS 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G +++ G  +    GH         PR+++ L     +Q++ G +    L  
Sbjct: 95  HSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD 154

Query: 234 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G + T G NTHGQLG G+  + + +P+ +  LE +  + Q+ AG S+  A++ +G V+ 
Sbjct: 155 DGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGI-PLAQVTAGGSHSFALSLSGAVFG 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  S   LG  ++  +  P  ++  R     VV +S G+EH   L  +G ++T+G G  
Sbjct: 214 WGKNSAGQLGLNDEQVKETPCHVKPLRTH--KVVYISCGEEHTAILTKAGGLFTFGAGGS 271

Query: 353 GALGH 357
           G LGH
Sbjct: 272 GQLGH 276



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 11/248 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G S  G LG+G      VS      F  A  V +V+    H  F+++ GQV++CG N   
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH         P  V  L     K +  G + +  L+++G++++ G+   GQLGH  T
Sbjct: 65  QLGHSHEGT---HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA-T 120

Query: 254 LDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DEL 310
           ++  +  P+ I  L +   + Q++ G  + LA+  +G ++++G  ++  LG G     + 
Sbjct: 121 VEHYSRIPRIIKKLSQ-QKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQS 179

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            P+ +++   +GI + +V+AG  H  AL  SG V+ WGK   G LG  DE  K  P  + 
Sbjct: 180 SPQKVKSL--EGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVK 237

Query: 371 SLKSHLAV 378
            L++H  V
Sbjct: 238 PLRTHKVV 245


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    + AG 
Sbjct: 2261 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDIAAGG 2319

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T+ G +++ G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 2320 AHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 2378

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2379 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 2436

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 2437 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 2472



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    V+  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2249 LLESIQHV--FVKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 2302

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +       VV ++A   H+A +  +G +++ G       GH D+   + +P+LVEAL+G
Sbjct: 2303 VVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQL-KPKLVEALQG 2361

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 2362 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 2420

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 2421 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 2478

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 2479 HCVCCTEDGEVYTWGDNDEGQLGDG 2503



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+V+A S+ H    L  +G+VF+  CGD      GH DT  P+  P+++ AL G 
Sbjct: 196 ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDT-VPLEEPKMISALSGK 252

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV- 271
              +    +  G  ++  +T  G ++T G   +G+LGHG + D+  P  +  L+ +  + 
Sbjct: 253 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVID 312

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V   +G +  LAVT NG V+S+G G    LG G       P+ I+    + + +V+V  G
Sbjct: 313 VSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDIVKVRCG 370

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            +  +AL   G VY+WGKG    LGHG E     P+ L  L+    V
Sbjct: 371 SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVV 417



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   VFS G    G LGHG       P+    +S  
Sbjct: 197 SRNIVKVAAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 252

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 253 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 307

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  +V+
Sbjct: 308 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVK 366

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  
Sbjct: 367 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGST 424

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T P+P
Sbjct: 425 HCLALTEDSEVHSWGSN--DQCQHFDTLRITKPQP 457



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 6/221 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A  +++  AS   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 1129 NAGSLIRKKASGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 1186

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 1187 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGG 1246

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A+
Sbjct: 1247 RHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAI 1304

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +Q
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 1345



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G+VF+ 
Sbjct: 1203 VYACGEATNGRLGLGI-SSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 1261

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G+
Sbjct: 1262 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 1320

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 1321 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1378

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWG+G  G L
Sbjct: 1379 GSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR + AL     K+
Sbjct: 1180 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKK 1239

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1240 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1298

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 1299 SHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQTL 1356

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 1357 ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL 1392



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+    NS       DT      P+LV+ L      +V A 
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS-------DT----LGPQLVQGLASRNIVKVAAH 206

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 266

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 267 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 324

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 325 VTENGQVWSWGDGDYGKLGRG 345



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ +  
Sbjct: 2247 PTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 2306

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV IAAG ++   +T  G +YS+G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2307 LRGI-EVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 2365

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 2366 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 2413



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 5/180 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1246 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1304

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1363

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGRG 1422



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 2226

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+  
Sbjct: 2227 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAE 2286

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 2287 DGKLGHGNRSPCDRPRVVESLR 2308



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2371 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 2429

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2430 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 2488

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 2489 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 2534



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 375

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 376 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 435 VHSWGSNDQCQ--HFDTLRITKPQPSALPGL-DTKHIVGIACGPAQSFA 480



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY     S          D L P+ +Q    + I  V   +
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS----------DTLGPQLVQGLASRNIVKVAAHS 207

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A
Sbjct: 208 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQA 254



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 34/252 (13%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 1294 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 1352

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1353 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 1411

Query: 233  IRGHVHTCGSNTHGQL-------GHGDTLDRPTPKS----IAPLEEVGSVVQIAAGPSYM 281
              G V T G    G+L         G+  DR   ++    + PL   G V     G   +
Sbjct: 1412 KSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIV 1471

Query: 282  LAVTGNGV----------------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
                 +G+                VY++G   +   G+G      +P  +Q    +G  +
Sbjct: 1472 GIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKI 1529

Query: 326  VRVSAGDEHVVA 337
             RV+ G  H VA
Sbjct: 1530 TRVACGSSHSVA 1541


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A   SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 113/247 (45%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P  I++    GI   +++AG  H   L  SG ++ WG+   G LG  D+ D+ +P  L S
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKVV 245



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   L  Q
Sbjct: 278 STSHEINPRKVFELMGSLVTQ 298



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 2924 VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2982

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL++ALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 2983 GEGDDGKLGHF-SRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3042 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3099

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3100 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3157

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3158 KPQVVEGLRGKKIVHVAVGALHCLA 3182



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3942 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3995

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3996 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4054

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4055 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4113

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4114 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4171

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4172 HCVCCTEDGEVYTWGDNDEGQLGDG 4196



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 171
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 2967 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3018

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3019 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3077

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3078 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3136

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG 
Sbjct: 3137 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGD 3194

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3195 NDHGQQGNG 3203



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3954 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4012

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4013 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4071

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4072 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4129

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4130 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4165



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 458

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 459 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 517

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 518 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 575

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 576 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 618



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 403 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 458

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 459 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 513

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 514 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 572

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 573 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 630

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H + L     V++WG        H D +  T PEP
Sbjct: 631 HCLVLTEDSEVHSWGSN--DQCQHFDTLGVTKPEP 663



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2929

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2930 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2989

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 2990 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3047

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3048 TTQLKPKMVKVLLGHRVIQ 3066



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 412

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 530

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 531 VTENGQVWSWGDGDYGKLGRG 551



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2901 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2958

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2959 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3017

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3018 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3075

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3076 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3113



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3940 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3999

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4000 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4058

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4059 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4106



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3015 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3073

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3074 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3132

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3133 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3191

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3192 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3234



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3919

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3920 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3979

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3980 DGKLGHGNRSPCDRPRVIESLR 4001



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4064 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4122

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4123 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4181

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4182 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4227



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 640

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 641 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 686



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3075 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3133

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3134 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3192

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3193 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3236



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 413

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 414 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 460


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3014 VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL++ALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3073 GEGDDGKLGHF-SRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++   
Sbjct: 3190 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 365  LPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 171
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3108

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3109 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3226

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG 
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGD 3284

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3285 NDHGQQGNG 3293



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4255



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H + L     V++WG        H D +  T PEP
Sbjct: 721 HCLVLTEDSEVHSWGSN--DQCQHFDTLGVTKPEP 753



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4196



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLR 4091



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 776



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A   SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 113/247 (45%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P  I++    GI   +++AG  H   L  SG ++ WG+   G LG  D+ D+ +P  L S
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKVV 245



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   L  Q
Sbjct: 278 STSHEINPRKVFELMGSLVTQ 298



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 135/291 (46%), Gaps = 23/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YH+  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 349 VLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVP-K 407

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 408 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 466

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G+  T  +                 + T G    G+LGH D   +  P  +
Sbjct: 467 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV 526

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A  E   +V Q+A G S  +A+T +G VY+ GS     LG+  Q D   P  ++    + 
Sbjct: 527 ALAEH--NVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSES 583

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 584 F-VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 633



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 25/229 (10%)

Query: 159 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A     V   +N      HAA V + G+VF+ G+ S    GH   +  +  P+L+EA
Sbjct: 299 FPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIEA 357

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT--HGQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   +  +T+ G ++T G+ T  +G LGHG+ +    PK +  PLE + 
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGI- 416

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  VR +
Sbjct: 417 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAA 474

Query: 330 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            G  H  A+             SS  ++TWG G  G LGH D+  K +P
Sbjct: 475 CGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVP 523



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALS 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 360 NT-NIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK
Sbjct: 418 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLK 466



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        V+ +    
Sbjct: 421 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVW 478

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            S  +FT GD      GH D    +  P  V   +   C QV
Sbjct: 479 HTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV-PTCVALAEHNVC-QV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQA-DGKLPILVEGKLSESFVEEIACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 640



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PK++     V  V  IA G  +   VT  G V+S+G  S   LGHG   D L
Sbjct: 292 GAKMDSLFPKALESAV-VLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL 350

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE 367
            P+ I+      I +V  + G+ H  A+  SG +YTWG G    G LGHG+++   +P+
Sbjct: 351 HPKLIEALSNTNIELV--ACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPK 407



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 21/198 (10%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ- 150
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGH  +  + 
Sbjct: 469 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKL 521

Query: 151 ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
              CV+    N      V QV+   +    +  SG+V+T G       G+   +  +  P
Sbjct: 522 VPTCVALAEHN------VCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKL--P 573

Query: 208 RLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            LVE  L     +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L+
Sbjct: 574 ILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 633

Query: 267 EVGSVVQIAAGPSYMLAV 284
           +   V  IA G ++  A+
Sbjct: 634 D-KDVKSIACGTTFTAAI 650



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSESFVEEIACGAY 593

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G  FT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTTFTAAICL 652

Query: 234 RGHV 237
              V
Sbjct: 653 HKWV 656


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 120/259 (46%), Gaps = 5/259 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+L L+SN    S G    G LGHG    +       +   A+     S +E  
Sbjct: 19  VSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYS 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A      +V++ G       GH D N  +F P+ + AL G    +V  G   T  +T  
Sbjct: 79  VALSQPRNEVYSWGWGDFGRLGHGDCND-VFIPQPIRALAGRNIVKVACGDTHTLAVTDT 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G + + G N +GQLG G T D   P+ +  L     V  IA G  + LA T  G V+++G
Sbjct: 138 GELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQ-EVTSIACGGEHSLAATSAGDVFAWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G   D   P  +     +G+ V  V+ G  H +A D +G VYT+G    G 
Sbjct: 197 WGRYGNLGVGPPEDRHLPSQVHGL--EGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLK 373
           LGHGD ID+ +P+ + SLK
Sbjct: 255 LGHGDCIDQLVPKAVESLK 273



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 11/288 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++++  +FS G +  G LG G  T+  +    +       V  ++   
Sbjct: 122 VKVACGDTHTLAVTDTGELFSFGRNQNGQLGLG-TTSDAILPQPVESLRGQEVTSIACGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 230
            H+     +G VF  G       G+     P  R  P  V  L+GV    V  G   +  
Sbjct: 181 EHSLAATSAGDVFAWGWGR---YGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIA 237

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
               G V+T G + +GQLGHGD +D+  PK++  L++   +V IA G  +  A   +G +
Sbjct: 238 ADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKD-SRIVLIAGGWRHTSAADDSGKL 296

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YS+G      LG G   D   P  +Q      + +  +S G  H  A+  +G V++WG+G
Sbjct: 297 YSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKL--LSCGWRHTFAVTEAGDVFSWGRG 354

Query: 351 YCGALGHGDEIDKTLPEPLSSLK-SHLAVQGLSVLAEVCPTIVQEDTR 397
             G LGH +  D   P  L+ L    + ++ L V A    T V    R
Sbjct: 355 VNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASPLTTYVPPADR 402



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 3/110 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  ++ G S+ LA+  NG+  S+G G +  LGHG+  +  +PRAI  F         V +
Sbjct: 16  VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAI--FHLMQASCSAVCS 73

Query: 331 GDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G E+ VAL      VY+WG G  G LGHGD  D  +P+P+ +L     V+
Sbjct: 74  GAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVK 123



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 317 TFRR--KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           TFR     + V  VS G  H +AL S+G   +WG+G  G LGHGD  ++  P  +
Sbjct: 6   TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAI 60


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A   SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 113/247 (45%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P  I++    GI   +++AG  H   L  SG ++ WG+   G LG  D+ D+ +P  L S
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKVV 245



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   L  Q
Sbjct: 278 STSHEINPRKVFELMGSLVTQ 298



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 19/300 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGV-LGHGPETTQCVSFTRINFP-SAAHVVQVSASE 172
           +  G Y T  +++S  +++ G +  G  LG    +       RI+ P +   ++ V+  +
Sbjct: 362 VACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGD 421

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG--- 229
            H A V  SGQ+FT GD S    GH +    + +P+ VE+LKG+  K V  G   T    
Sbjct: 422 WHTAIVSSSGQLFTYGDGSFGVLGHGNL-LSVSQPKEVESLKGLLVKSVACGSWHTAAIV 480

Query: 230 --------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                   F  + G + T G    G+LGH D   +  P  +A L E+    Q++ G    
Sbjct: 481 DIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVEL-DFDQVSCGRMLT 539

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T  G VY+ GS  +  LG+    D  +   I   + K   V  +S+G  HV AL SS
Sbjct: 540 VALTNTGKVYTMGSSVHGQLGNPHAKD--KSIVIVEGKLKEEFVKEISSGSYHVAALTSS 597

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCSD 401
           G +YTWGKG  G LG G+  D+  P  + +L+  + VQ ++  + +   I    + S SD
Sbjct: 598 GSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRD-MQVQSIACGSNLTAAICLHKSISVSD 656



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G+VF  G+ S    GH+  +  +  P++VE+L GV  K V  G
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPKMVESLDGVHVKSVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTHG-QLG-HGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G ++  G N +G  LG    +  +  P+ I+ PL  V  ++ +A G  + 
Sbjct: 366 EYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGV-CILNVACGDWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
             V+ +G ++++G GS   LGHG      QP+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESL--KGLLVKSVACGSWHTAAIVDI 482

Query: 341 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                      G ++TWG G  G LGH D   K LP  ++ L
Sbjct: 483 IVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQL 524



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 8/174 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +    ++ G      +T RG V   G  + G+LGH   +D  +PK +  L+
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLD 355

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQ-HDELQPRAIQTFRRKG 322
            V  V  +A G     A+T +G +Y++G    G+N  LG  E+   +  PR I +    G
Sbjct: 356 GV-HVKSVACGEYQTCALTDSGELYAWGENKYGAN--LGCEERSRSQWLPRRI-SGPLTG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           + ++ V+ GD H   + SSG ++T+G G  G LGHG+ +  + P+ + SLK  L
Sbjct: 412 VCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLL 465



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)

Query: 284 VTGNGV-VYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + G GV V + G   N F   + +Q D L P+ +++     + V  +S G +H   +   
Sbjct: 266 IWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVM--LDVTNISLGRKHAALITKR 323

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G V+ WG+G  G LGH  ++D + P+ + SL
Sbjct: 324 GEVFCWGEGSRGKLGHKVDMDVSSPKMVESL 354


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           + ++ A   Q+  G+  T ++  N ++ +CG    G LG G  +    + + I+      
Sbjct: 513 VTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMG-NSDDLFTLSPISALQGYV 571

Query: 165 VVQVS---ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           V+Q++    S+ H+  +  SG+VF+ GD      GH +++R   RPR +EAL+G     +
Sbjct: 572 VIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGEEVVNM 630

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +  +T+ G + T G+  +G+LGHG++ ++ TP+ +  LE+  ++ Q+A G ++ 
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEK-HAIGQVACGLNHT 689

Query: 282 LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           L ++ +G  V++FG G    LG G    +  P+AI      GI   ++  G +  V L +
Sbjct: 690 LVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVL--AGIGCKKICCGTQFSVVLTN 747

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            G V+++G+        G       P+ + +L SH 
Sbjct: 748 DGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHF 783



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 9/144 (6%)

Query: 238 HTCGSNTHGQLGH-GDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           +  G   HGQL   G  ++ PT  KS+A      S  Q+  G +    V  NG + + G 
Sbjct: 491 YLWGGGRHGQLAESGRGVNVPTVTKSLA------SAQQVVCGQNCTFVVQVNGTILACGE 544

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
           GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 545 GSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGK 604

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAV 378
           LGHG+   +  P  + +L+    V
Sbjct: 605 LGHGNSDRQRRPRQIEALRGEEVV 628


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 13/263 (4%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 95  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 151

Query: 174 HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 152 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 209

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 210 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 268

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V+T+G 
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGVFTFGA 326

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
           G  G LGHG ++++ +P  +  L
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVEL 349



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 146 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 205

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 206 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 265

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 266 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 324

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA    SG +Y +G G  
Sbjct: 325 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 382

Query: 353 GALGHGDEIDKTLP 366
           G LG+G      LP
Sbjct: 383 GQLGNGTLESSALP 396



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 9/214 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGAND---FGQLGQDRSMRKLEQVAALSAHEIRAVACG 149

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 150 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 208

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 266

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           G V+ WG+  CG LG  D+ D+  P  L  L+S 
Sbjct: 267 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQ 300



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 18/193 (9%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           DT  P+ +P  V        ++V  G   T  L   G V++CG+N  GQLG         
Sbjct: 74  DTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQD------- 126

Query: 259 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQP 312
            +S+  LE+V +     +  +A G ++ LA++  G V+S+G   N  LG G E+   L+P
Sbjct: 127 -RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRP 185

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           + I+  +   +H+V+++ G  H +AL ++G +++WG    G LG G   D T  E L   
Sbjct: 186 KVIK--KLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGR--DSTGNERLPRR 241

Query: 373 KSHLAVQGLSVLA 385
            SHL    L+++A
Sbjct: 242 VSHLVGVPLALVA 254



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           +QI  G  H L L +N  +FS G +  G LG G ++T      R ++      +  V+  
Sbjct: 197 VQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACG 256

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +  SG VF  G NS    G  D  R    P +++ L+    K V  G N T  L
Sbjct: 257 AMHSVGLTPSGTVFVWGRNSCGQLGLSD-QRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT-GNGV 289
           T  G V T G+ T+GQLGHG  ++   P+ +  +E +G+ + Q++ G  + +A    +G 
Sbjct: 316 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGR 373

Query: 290 VYSFGSGSNFCLGHG 304
           +Y FG G +  LG+G
Sbjct: 374 LYIFGLGMSGQLGNG 388


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 9/276 (3%)

Query: 107 VETSAGNMQITTGRYHTLL--ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           V+  +G + + +  ++++   +S + V S G    G LGHG +T   +  T+++      
Sbjct: 99  VKVHSGMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQD 157

Query: 165 VVQVSASENHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V V+   ++     +SG+ V++ G       GH D +  +F P  + AL+G+  KQ++ 
Sbjct: 158 IVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISC 216

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +T+   V + G N +G+LG G T D   P+ I   E +  +  +AAG  + +A
Sbjct: 217 GDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVA 275

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G +Y +G G    LG G+ +D L P  +      G  +V VS G  H +++ SSG 
Sbjct: 276 ITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSGG 332

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           +YT G    G LGHGD  D  +P  + +L   L  Q
Sbjct: 333 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQ 368



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 6/215 (2%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  +T+  S S   V+S G    G LGHG  +   +    I       + Q+S  
Sbjct: 159 VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP-IRALQGLRIKQISCG 217

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H   V    +V + G N +   G   T +    P+ + A +G+  K V AG   +  +
Sbjct: 218 DCHCLAVTMENKVLSWGRNQNGELG-LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 276

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GDT DR  P+ +    +   +V ++ G  + ++++ +G +Y
Sbjct: 277 TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLY 334

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           + G      LGHG+  D L PR +Q    K I  V
Sbjct: 335 THGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 369


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2735

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2736 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2794

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2851

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2909

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 2947



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 2739 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 2797

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 2798 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 2856

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 2857 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 2915

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 2916 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2972



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 2676 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 2735

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 2736 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 2793

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 2794 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 2832



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 2783 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 2841

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 2842 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 2898

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 2899 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 2956

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 2957 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 3003



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 2836 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 2894

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 2895 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 2950

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 2951 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 3009


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 127/273 (46%), Gaps = 13/273 (4%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           +  +A  M+I  G  H+L +S   +V++ G +  G LG   E T          PS   +
Sbjct: 45  ITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGG--EATPLQRLAPAPLPSPRDI 102

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V + E H+  + ++G V+  G NSS   G   T   +  P  V  L  V    V AG 
Sbjct: 103 VSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVT-PMQVAGLTDVVA--VAAGD 159

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   G V   G+N HGQLG G T    TP+ +  LE    VV +AAG  + LAV 
Sbjct: 160 FHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLE---GVVALAAGFDFTLAVM 216

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V ++G+ S+  LG G     L P  ++     GI  V  +AG  H VAL   G V+
Sbjct: 217 DDGTVRAWGANSSGQLGDGTFTQRLAP--VEVAHISGISAV--TAGTYHAVALGKDGGVW 272

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           TWG    G LG G   D+ +P  +  L+   AV
Sbjct: 273 TWGANSSGQLGDGAWSDRAVPARVPGLERVKAV 305



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 123/266 (46%), Gaps = 14/266 (5%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +H+L  + + +V+S G +  G LG G   T       +     + +  V+AS +H
Sbjct: 405 MAAGSFHSLAALGDGTVWSWGRNTYGQLGDG---TTAERHAAVRVEGLSGIRGVAASGHH 461

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G N++   G   T R   RP  V  L  V    V  G + T  L   
Sbjct: 462 SLAVGADGTVWAWGRNAAGQLGDGST-RDRARPVAVSGLTSVVA--VATGGSHTMALRGD 518

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N  GQLG G T+DR TP  +A L+   SVV +AAG  + +A+ G+G V+++G
Sbjct: 519 GTVWAWGYNALGQLGDGTTVDRLTPVRVARLD---SVVAVAAGTYFSMALRGDGTVWTWG 575

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    +G G     L P  +        +V RV+AG  H +A+   G V+ WG    G 
Sbjct: 576 EGFEGQVGDGGGVQRLFPVQVAGL----TNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQ 631

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQG 380
           LG G   D+  P  +  L    AV G
Sbjct: 632 LGDGTWSDRFRPVQVPGLTGITAVSG 657



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 16/272 (5%)

Query: 112  GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G   ++ GR  +L +  + + ++ G++  G LG G   +Q V        S   V  +SA
Sbjct: 951  GVASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPK---QVTSVKRVRAMSA 1007

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H   + + G V+T GDN+    G   +      PR V  L+ V  + V AG  F+  
Sbjct: 1008 GAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDV--EAVAAGEQFSVA 1065

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSVVQIAAGPSYMLAVTG 286
            + + G  H  GSN +GQLG G T  R TP  +    + L +   V  + A   + +A+  
Sbjct: 1066 VLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQ--PVRTVRAWAQHAVALMA 1123

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V ++G  ++  LG G       P  ++        VV VS G  H +AL S G V+ 
Sbjct: 1124 DGTVQAWGDNAHGQLGDGTTERRAAPVVVRGL----TGVVAVSTGAWHSLALRSDGTVWA 1179

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG    G LG G  + +T P  ++ L+  +A+
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQKVVAI 1211



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 117/271 (43%), Gaps = 23/271 (8%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +D+V  +AG+       +H+L L  + +V++ G++  G LG G         T    P  
Sbjct: 150 TDVVAVAAGD-------FHSLALRGDGTVWAWGTNFHGQLGRGHTEP---GLTPEPVPGL 199

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQV 221
             VV ++A  +    V+  G V   G NSS   G    T R    P  V  + G+    V
Sbjct: 200 EGVVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQR--LAPVEVAHISGISA--V 255

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           TAG      L   G V T G+N+ GQLG G   DR  P  +  LE V +V  + A     
Sbjct: 256 TAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDA---SS 312

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+   G V ++G+  +  LG     D   P  +   R     V  V  G +H +AL   
Sbjct: 313 LALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPGLR----SVAAVVGGAQHALALRGD 368

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G ++ WG G  G LGHG      +P PL  L
Sbjct: 369 GTLWAWGGGLAGQLGHGGSERHVVPAPLLRL 399



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 18/267 (6%)

Query: 106  IVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
            +V    G + ++TG +H+L L S+ +V++ G++  G LG G   T     T +       
Sbjct: 1151 VVRGLTGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDG---TTLSRTTPVRVAGLQK 1207

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            VV + A   HA  V   G V+  G N+    G   T      P  VE L  V    V  G
Sbjct: 1208 VVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGD-GTAESRLLPVRVEGLSNV--TSVAGG 1264

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             + +  L   G +   G+N  GQLG G    R    S   ++ V  VV++ AG ++ LA+
Sbjct: 1265 DHHSLALLADGSLGAWGNNAAGQLGDGTGTTR---YSRVWVKGVDGVVEVRAGAAHTLAL 1321

Query: 285  TGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             G+G V+++G  ++  LG G+      + PR +         V  + AG  H  A+   G
Sbjct: 1322 RGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLS----GVTAIGAGARHSFAVGPKG 1377

Query: 343  YVYTWGKGYCGALGHGDEIDKTLPEPL 369
             V+ WG+   G LG GD  ++   EPL
Sbjct: 1378 TVWAWGRNSHGQLGLGDNANRA--EPL 1402



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 16/256 (6%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G YH L + S+ SV++ G +  G LG G   ++ +    +     ++V  V+  +
Sbjct: 1209 VAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLP---VRVEGLSNVTSVAGGD 1265

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            +H+  +L  G +   G+N++   G   T    +    V+ + GV   +V AG   T  L 
Sbjct: 1266 HHSLALLADGSLGAWGNNAAGQLGD-GTGTTRYSRVWVKGVDGV--VEVRAGAAHTLALR 1322

Query: 233  IRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
              G V T G NTH QLG GD  T  R  P+   P+  +  V  I AG  +  AV   G V
Sbjct: 1323 GDGTVWTWGDNTHSQLGAGDDSTRTRIVPR---PVPGLSGVTAIGAGARHSFAVGPKGTV 1379

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +++G  S+  LG G+  +  +P  ++        V  VS G +  +A+   G V +WG  
Sbjct: 1380 WAWGRNSHGQLGLGDNANRAEPLRVKEL----AEVSVVSGGADFSLAMQRDGTVSSWGSS 1435

Query: 351  YCGALGHGDEIDKTLP 366
              GALG G    ++ P
Sbjct: 1436 LHGALGLGTAGQRSSP 1451



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 19/267 (7%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H+L ++ + SV++ G++  G LG G   ++ +   R++    A  V      + 
Sbjct: 805  VASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIP-ARVDGLQGAVAVAAGGDASL 863

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
            A  +L  G  +  G N+    G   T+      R V     +P   ++  L  T  L   
Sbjct: 864  A--LLADGTAWAWGANAHGQLGDGSTSD-----RAVPGQLKLPSNIMSVALGETHGLAAG 916

Query: 234  -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G +   G+N  GQLG G T   PTP  +  LE V SV   +AG ++ LAV  +G  ++
Sbjct: 917  EDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV---SAGRAFSLAVRQDGTAWA 973

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G+  +  LG G  H +  P+ + + +R    V  +SAG  HVVAL   G V+TWG    
Sbjct: 974  WGANPSGQLGDGTNHSQRVPKQVTSVKR----VRAMSAGAHHVVALGEDGAVWTWGDNTL 1029

Query: 353  GALGHGDEIDKTL-PEPLSSLKSHLAV 378
            G LG G      + P  +  L+   AV
Sbjct: 1030 GQLGDGTSAPTWMWPRQVPELRDVEAV 1056



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 27/284 (9%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++ G +H + L  + +V++ G +  G LG G  T+          P    V  V+A E  
Sbjct: 1005 MSAGAHHVVALGEDGAVWTWGDNTLGQLGDG--TSAPTWMWPRQVPELRDVEAVAAGEQF 1062

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALK-GVPCKQVTAGLNF 227
            +  VL  G     G N     G   T      PRL      +EA K   P + V A    
Sbjct: 1063 SVAVLVGGGAHAWGSNEYGQLGDGKTG-----PRLTPVQVRIEASKLRQPVRTVRAWAQH 1117

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
               L   G V   G N HGQLG G T  R  P  +  L     VV ++ G  + LA+  +
Sbjct: 1118 AVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLT---GVVAVSTGAWHSLALRSD 1174

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            G V+++G+     LG G       P  +   ++    VV + AG  H +A+ S G V+ W
Sbjct: 1175 GTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQK----VVAIGAGGYHALAVRSDGSVWAW 1230

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG-----LSVLAE 386
            G    G LG G    + LP  +  L +  +V G     L++LA+
Sbjct: 1231 GYNAFGQLGDGTAESRLLPVRVEGLSNVTSVAGGDHHSLALLAD 1274



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 110/255 (43%), Gaps = 15/255 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+   SV + G++  G LG      +    T    P    V  V     HA  +   G +
Sbjct: 315 LLEAGSVLAWGANGSGQLGDSGTDDRA---TPGEVPGLRSVAAVVGGAQHALALRGDGTL 371

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVHTCGSN 243
           +  G   +   GH  + R +    L   L+      + AG +F     +  G V + G N
Sbjct: 372 WAWGGGLAGQLGHGGSERHVVPAPL---LRLADVASMAAG-SFHSLAALGDGTVWSWGRN 427

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T+GQLG G T +R    +   +E +  +  +AA   + LAV  +G V+++G  +   LG 
Sbjct: 428 TYGQLGDGTTAER---HAAVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLGD 484

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   D  +P A+         VV V+ G  H +AL   G V+ WG    G LG G  +D+
Sbjct: 485 GSTRDRARPVAVSGL----TSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDR 540

Query: 364 TLPEPLSSLKSHLAV 378
             P  ++ L S +AV
Sbjct: 541 LTPVRVARLDSVVAV 555



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 122/313 (38%), Gaps = 64/313 (20%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHG---PETTQC---VSFTRINFPSAAHVVQVSASEN 173
            ++   ++      + GS+  G LG G   P  T     +  +++  P    V  V A   
Sbjct: 1061 QFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQP----VRTVRAWAQ 1116

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            HA  ++  G V   GDN+    G   T R    P +V  L GV    V+ G   +  L  
Sbjct: 1117 HAVALMADGTVQAWGDNAHGQLGDGTTERRAA-PVVVRGLTGVVA--VSTGAWHSLALRS 1173

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V   G+N  GQLG G TL R TP  +A L++V   V I AG  + LAV  +G V+++
Sbjct: 1174 DGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQKV---VAIGAGGYHALAVRSDGSVWAW 1230

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRR--------------------------------- 320
            G  +   LG G     L P  ++                                     
Sbjct: 1231 GYNAFGQLGDGTAESRLLPVRVEGLSNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGD 1290

Query: 321  ------------KGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--L 365
                        KG+  VV V AG  H +AL   G V+TWG      LG GD+  +T  +
Sbjct: 1291 GTGTTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIV 1350

Query: 366  PEPLSSLKSHLAV 378
            P P+  L    A+
Sbjct: 1351 PRPVPGLSGVTAI 1363



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 21/226 (9%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVT 222
            V +++    H   V   G V   G+N+S   G   T      P LV   +GVPC + V 
Sbjct: 751 RVDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAG-PVLV---RGVPCVRSVA 806

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           +G+  +  L   G V   G+N  GQLG G T  R  P  +  L+   +V          L
Sbjct: 807 SGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG---DASL 863

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+  +G  +++G+ ++  LG G   D   P  ++       +++ V+ G+ H +A    G
Sbjct: 864 ALLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLPS----NIMSVALGETHGLAAGEDG 919

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            ++ WG    G LG G     T P P     + + V+GL  +A V 
Sbjct: 920 ALWAWGANGSGQLGEG----STTPSP-----TPVRVKGLEGVASVS 956



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 112/266 (42%), Gaps = 26/266 (9%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  H L +  + +V++ G +  G LG G   T    F  +  P    +  VS   +
Sbjct: 604 RVAAGSAHALAVRGDGTVWAWGDNGEGQLGDG---TWSDRFRPVQVPGLTGITAVSGGRS 660

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGV----PCKQVTAGLNFT 228
           H+  +   G V   G N     G    T+R   RP +V  L G+    P       L+  
Sbjct: 661 HSMALHGDGSVRAWGYNGYGQLGDGTFTSR--VRPAVVPGLTGIQALHPSHLHVLALHAD 718

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           G  T+RG     G N  GQLG G       P  +  L   G V ++A G ++ L V  +G
Sbjct: 719 G--TLRG----WGYNRFGQLGLGAAGWSSRPVQVRGL---GRVDRLAVGRAHTLMVRPDG 769

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTW 347
            V ++G  ++  LG G       P  +     +G+  VR V++G  H +AL   G V+ W
Sbjct: 770 AVLAWGENASGQLGDGTTTHRAGPVLV-----RGVPCVRSVASGVLHSLALACDGSVWAW 824

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLK 373
           G    G LG G    + +P  +  L+
Sbjct: 825 GANGRGQLGDGTTASRVIPARVDGLQ 850



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 5/166 (3%)

Query: 99   SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
            +  +S   V+   G +++  G  HTL L  + +V++ G +    LG G ++T+     R 
Sbjct: 1294 TTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPR- 1352

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
              P  + V  + A   H+  V   G V+  G NS    G  D N     P  V+ L  V 
Sbjct: 1353 PVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGD-NANRAEPLRVKELAEVS 1411

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
               V+ G +F+  +   G V + GS+ HG LG G    R +P  +A
Sbjct: 1412 V--VSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVA 1455


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 117/250 (46%), Gaps = 6/250 (2%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L L S  +V + G++  G LG G  T    +   +N P       V+A   H+  V  
Sbjct: 152 HSLALTSAGTVLAWGANTIGQLGDG-TTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTS 210

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V   GDN+S   G   T  P   P +V    GV    V  G   +  +T  G V   
Sbjct: 211 AGTVLAWGDNASGQLGE-GTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAW 269

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSN+ GQLG G T DR TP +++ L    +V  +AAG ++ LA++  G V ++GS S+  
Sbjct: 270 GSNSSGQLGDGTTADRSTPVAVS-LSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQ 328

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G   D   P  + +    G  V  ++ GD H +A+ S G    WG    G LG G  
Sbjct: 329 LGDGTTADRSTPVTVSS--PAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTN 386

Query: 361 IDKTLPEPLS 370
            D+  P  +S
Sbjct: 387 TDRVTPVAVS 396



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 106/249 (42%), Gaps = 13/249 (5%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           ++  +  + G +  G LG G  T        ++ P+   V  V+A   H   V  +G + 
Sbjct: 53  VAADTALAWGDNASGQLGDG-STADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTIL 111

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF----LTIRGHVHTCG 241
             GDNSS   G   T+      R      G+P       +         LT  G V   G
Sbjct: 112 AWGDNSSGQLGDGTTSN-----RHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWG 166

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           +NT GQLG G T+D P P  +  L    +   +AAG ++ LAVT  G V ++G  ++  L
Sbjct: 167 ANTIGQLGDGTTIDSPAPVDVN-LPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQL 225

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G G       P  +      G+    V+ GD H +A+ S+G V  WG    G LG G   
Sbjct: 226 GEGTTIPSRTPVVVS--LPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTA 283

Query: 362 DKTLPEPLS 370
           D++ P  +S
Sbjct: 284 DRSTPVAVS 292



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 13/222 (5%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           H+L ++++ +V + G +  G LG G   P  T  V    ++ PS      V+  + H+  
Sbjct: 204 HSLAVTSAGTVLAWGDNASGQLGEGTTIPSRTPVV----VSLPSGVTATAVAGGDLHSLA 259

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           V  +G V   G NSS   G   T +R    P  V    G     V AG+ F+  L+  G 
Sbjct: 260 VTSAGAVLAWGSNSSGQLGDGTTADR--STPVAVSLSGGTTVTAVAAGIAFSLALSSAGA 317

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GSN+ GQLG G T DR TP +++      +V  IA G ++ LAVT  G   ++G+ 
Sbjct: 318 VLAWGSNSSGQLGDGTTADRSTPVTVSSPAGT-TVTAIAGGDAHGLAVTSVGAAIAWGNN 376

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S   LG G   D + P A+         +  ++AG  H VA+
Sbjct: 377 SFGQLGDGTNTDRVTPVAVS-LPVGTTTLTAIAAGAAHSVAV 417



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 3/141 (2%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G V   G N  GQLG G T+   TP  ++ L    +   +A G  + LAVT  G V
Sbjct: 208 VTSAGTVLAWGDNASGQLGEGTTIPSRTPVVVS-LPSGVTATAVAGGDLHSLAVTSAGAV 266

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++GS S+  LG G   D   P A+      G  V  V+AG    +AL S+G V  WG  
Sbjct: 267 LAWGSNSSGQLGDGTTADRSTPVAVS--LSGGTTVTAVAAGIAFSLALSSAGAVLAWGSN 324

Query: 351 YCGALGHGDEIDKTLPEPLSS 371
             G LG G   D++ P  +SS
Sbjct: 325 SSGQLGDGTTADRSTPVTVSS 345


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  104 bits (259), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 45/287 (15%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+TG  HT +I++   +++ G  L G LGHG  T +  S  R+        +  VV V+ 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHG--TLESYSEPRLVEFFETKPSLRVVSVAN 223

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLV------------------- 210
              H   +   G V++ G N S   G  + +   +  P+LV                   
Sbjct: 224 GGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIM 283

Query: 211 -EALKGVPCKQ-------------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
             +   +  KQ             ++   N +  ++  G+++T G   +G+LGHGD+L +
Sbjct: 284 SNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQ 343

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAI 315
            TPK +  L    ++V ++ G  + +A+T  G V+S+G G N  LGHG     ++ P+ I
Sbjct: 344 STPKQVMSLHG-HTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQI 402

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           Q F+ K I V+  SAG  H +A+D++G ++ WG+G  G LG    +D
Sbjct: 403 QAFQNKTIKVI--SAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLD 447



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++++S S N +A + + G ++T G   +   GH D+      P+ V +L G     ++ G
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQS-TPKQVMSLHGHTIVDMSLG 363

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  LT RG V + G   +GQLGHG  T  + TPK I   +   ++  I+AG  + +A
Sbjct: 364 GGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQN-KTIKVISAGGYHSIA 422

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDEL----QPRAIQTFRRK----------GIHVVRVS 329
           +  NG ++++G G    LG     D L     P  I++              G   + VS
Sbjct: 423 IDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVS 482

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCP 389
           +G +H VA   +G +Y+WG G    LG  +E ++ +P+ L+  +S+ +        E+  
Sbjct: 483 SGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLND-RSNNSKPAFFSCGEIIT 541

Query: 390 TIVQEDTRSCSD 401
            IV++     SD
Sbjct: 542 IIVEKKLIENSD 553



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 41/242 (16%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
           + RI+F     VV +S    H + +   G ++T GD      GH  T      PRLVE  
Sbjct: 153 YERIDFLKE-KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGH-GTLESYSEPRLVEFF 210

Query: 214 KGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPK-------- 260
           +  P  +V +   G   T  LT+ G+V++ G N   QLG G+       TP+        
Sbjct: 211 ETKPSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQ 270

Query: 261 ---------------SIAPL---------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
                          S + L          ++  +++++   +   A++  G +Y++G G
Sbjct: 271 SLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRG 330

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            N  LGHG+   +  P+ + +    G  +V +S G  H +AL   G V++WG+G  G LG
Sbjct: 331 DNGRLGHGDSLMQSTPKQVMSLH--GHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLG 388

Query: 357 HG 358
           HG
Sbjct: 389 HG 390



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-GIHVVRVS 329
           VV I+ G  +   +T  G +Y++G G    LGHG      +PR ++ F  K  + VV V+
Sbjct: 163 VVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVA 222

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            G +H VAL   G VY++G      LG G+
Sbjct: 223 NGGKHTVALTVCGNVYSFGGNDSCQLGLGN 252



 Score = 48.1 bits (113), Expect = 0.009,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 16/200 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +++ G    G LGHG    Q      ++      +V +S    H+  + + G+VF+ G  
Sbjct: 324 LYTWGRGDNGRLGHGDSLMQSTPKQVMSL-HGHTIVDMSLGGGHSMALTKRGEVFSWGRG 382

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +   GH         P+ ++A +    K ++AG   +  +   G +   G   +G LG 
Sbjct: 383 ENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGV 442

Query: 251 GDTLDR----PTPKSIAPLEEVGS-----------VVQIAAGPSYMLAVTGNGVVYSFGS 295
             +LD      +P  I  L                 + +++G  + +A T NG +YS+G 
Sbjct: 443 SSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGC 502

Query: 296 GSNFCLGHGEQHDELQPRAI 315
           GS   LG   + ++L P+ +
Sbjct: 503 GSGNRLGLANEENQLIPKKL 522



 Score = 39.3 bits (90), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           E  D  Q   I   + K   VV +S G  H   +   G++YTWG G  G LGHG
Sbjct: 146 ELDDNEQYERIDFLKEK---VVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHG 196


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 11/248 (4%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G  E     +   +++  A  V++ +   NH  F+ + G+V++CG 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH   ++P  RP+LV  L       V  G   +  L+  G V + GS+ +GQLG
Sbjct: 61  NDYGQLGH---DQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG 117

Query: 250 H--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
           H  G TL +  PK I  L +   VVQIAAG  + +A+T  G ++ +G+     LG G   
Sbjct: 118 HQLGGTL-QIVPKLIKSLAKY-QVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTIT 175

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             E  P  + +    GI    ++ G  H  A+  SG V+ WGK   G LG  D + K  P
Sbjct: 176 PYESTPTTVCSL--SGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFP 233

Query: 367 EPLSSLKS 374
             L +L++
Sbjct: 234 TQLRTLRN 241



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 8/261 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+   G  HTL ++ +  V+SCGS+  G LGH     +    + ++   A  ++ V+  E
Sbjct: 37  MKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKRPQLVSGLD---AYSIINVACGE 93

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G+VF+ G ++    GH+        P+L+++L      Q+ AG   +  LT
Sbjct: 94  MHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT 153

Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G +   G+N  GQLG G  T    TP ++  L  +   + IA G ++  AV+ +G V+
Sbjct: 154 NAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFAL-IACGANHTFAVSKSGAVF 212

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G   N  LG  +   +  P  ++T R   +  +  S GDE    L   G V++ G G 
Sbjct: 213 GWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFI--SCGDEFSTFLTLDGGVFSCGAGM 270

Query: 352 CGALGHGDEIDKTLPEPLSSL 372
            G LGHG   ++ LP  +  L
Sbjct: 271 YGQLGHGGTSNEILPRQVLEL 291



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G+ H++ ++N+  +F  G++  G LG G  T    + T +   S      ++   
Sbjct: 140 VQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGA 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   V +SG VF  G N +   G  DT    F P  +  L+    + ++ G  F+ FLT
Sbjct: 200 NHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKF-PTQLRTLRNSRVRFISCGDEFSTFLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
           + G V +CG+  +GQLGHG T +   P+ +  LE +GS + QI+ G  + LA V   G V
Sbjct: 259 LDGGVFSCGAGMYGQLGHGGTSNEILPRQV--LELMGSTITQISCGRQHSLAFVPSRGRV 316

Query: 291 YSF 293
           YS+
Sbjct: 317 YSY 319


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 15/279 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1669

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1670 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1728

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1785

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 1843

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVL-AGVIIEDVAVGAE 1881



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 1673 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 1731

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 1732 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 1790

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 1791 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 1849

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 1850 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 1906



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 1610 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 1669

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 1670 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 1727

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 1728 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 1766



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 1717 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 1775

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 1776 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 1832

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 1833 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 1890

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 1891 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 1937



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 1770 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 1828

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 1829 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 1884

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 1885 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 1943


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 3/205 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V QV+    H   + + GQV+T G NS    G       I  P+ V +L G+P  QV+AG
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG 178

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  L++ G V   G N  GQLG GD+ DR TP S+  L  +     I+ G  +   +
Sbjct: 179 GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSL-NLKKTTSISCGKDHTAIL 237

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V++FGSG    LGH    +EL+PR +      G  V R++ G  H + L  +  +
Sbjct: 238 TKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELW--GAKVTRIACGRYHTLVLQENNKI 295

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPL 369
           Y++G      LG  ++   ++P P+
Sbjct: 296 YSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 122/280 (43%), Gaps = 37/280 (13%)

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT----------CGDNSSFCCGHR--- 198
           ++F + N    A V++ S  EN A   ++  Q F           CGD+       +   
Sbjct: 41  LAFAKTN--GNAFVMRTSDGENGAR--MRGKQKFVKCKEKIEAVGCGDDEVILLSEKGSV 96

Query: 199 ---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-L 254
              D  + ++ PR++EA   +P  QV  G   T  LT  G V+T G N+ GQLG G    
Sbjct: 97  YRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGC 156

Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQP 312
              +P+ +  L  +  +VQ++AG  +  A++ +G V  FG G N C  LG G+  D   P
Sbjct: 157 SISSPQCVRSLSGM-PLVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDRCTP 213

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            ++ +   K      +S G +H   L   G V+T+G G  G LGH    ++  P  ++ L
Sbjct: 214 TSVDSLNLK--KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAEL 271

Query: 373 KSHLAVQGLSVLAEVCP---TIVQEDTRSCSDIICHDSTQ 409
                  G  V    C    T+V ++        C+D  Q
Sbjct: 272 ------WGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQ 305



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H+  +S S SVF  G + CG LG G    +C   T ++  +      +S  +
Sbjct: 173 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTP-TSVDSLNLKKTTSISCGK 231

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A + + G VFT G       GH +++R   RPRLV  L G    ++  G   T  L 
Sbjct: 232 DHTAILTKHGTVFTFGSGQFGQLGH-NSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQ 290

Query: 233 IRGHVHTCGSNTHGQLGHGD 252
               +++ G N   QLG  +
Sbjct: 291 ENNKIYSFGCNDQNQLGRSN 310


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 13/263 (4%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 89  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 145

Query: 174 HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 146 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 203

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 204 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 262

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V+T+G 
Sbjct: 263 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGVFTFGA 320

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
           G  G LGHG ++++ +P  +  L
Sbjct: 321 GTYGQLGHGVKVNEAVPRRVVEL 343



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 140 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 199

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 200 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 259

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 260 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 318

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA    SG +Y +G G  
Sbjct: 319 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 376

Query: 353 GALGHGDEIDKTLP 366
           G LG+G      LP
Sbjct: 377 GQLGNGTLESSALP 390



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 9/214 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGAND---FGQLGQDRSMRKLEQVAALSAHEIRAVACG 143

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 144 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 202

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 260

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           G V+ WG+  CG LG  D+ D+  P  L  L+S 
Sbjct: 261 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQ 294



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           +QI  G  H L L +N  +FS G +  G LG G ++T      R ++      +  V+  
Sbjct: 191 VQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACG 250

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +  SG VF  G NS    G  D  R    P +++ L+    K V  G N T  L
Sbjct: 251 AMHSVGLTPSGTVFVWGRNSCGQLGLSD-QRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT-GNGV 289
           T  G V T G+ T+GQLGHG  ++   P+ +  +E +G+ + Q++ G  + +A    +G 
Sbjct: 310 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGR 367

Query: 290 VYSFGSGSNFCLGHG 304
           +Y FG G +  LG+G
Sbjct: 368 LYIFGLGMSGQLGNG 382


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 17/265 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFN--GKQAGKHVVHIACGST 524

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 525 YSAAITVDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 583

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 584 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 642

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 643 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 699

Query: 352 CGALGHGDEI--DKTLPEPLSSLKS 374
              L H D +  +K  P+ L  L S
Sbjct: 700 -DKLQHFDTLFSNKKQPKALPGLNS 723



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3847 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 3905

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 3906 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 3964

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ V++V  G +  VAL  SG 
Sbjct: 3965 LTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSL--TGLGVIKVECGSQFSVALTKSGA 4022

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4058



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 2827 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKAKRIRDIACGSSHSAAI 2885

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3003

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3004 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3061

Query: 357  HG 358
            +G
Sbjct: 3062 NG 3063



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 22/268 (8%)

Query: 131  VFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            +++CG +  G LG G      P   Q  + +  N+      V V +   HA  +   G+V
Sbjct: 2784 IYACGEATNGRLGLGLSSGTIPIPRQITALS--NY--VVKKVAVHSGGRHAMALTVDGKV 2839

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G +++ G   
Sbjct: 2840 FSWGEGDDGKLGHF-SRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGE 2898

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCL 301
            +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    L
Sbjct: 2899 YGRLGHGDNTTQLRPKLVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2956

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++
Sbjct: 2957 GRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3014

Query: 362  DKTLPEPLSSLKS----HLAVQGLSVLA 385
                P+ +  L+     H+AV  L  LA
Sbjct: 3015 HVRKPQMVEGLRGKKIVHVAVGALHCLA 3042



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 16/228 (7%)

Query: 161 SAAHVVQVSASEN--HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           S+  +V+++A  +  H   +  +G+VF+  CGD      GH DT   +  P ++ A  G 
Sbjct: 454 SSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRL--GHGDTTY-LEEPTMIAAFNGK 510

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T+ G ++T G   +G+LGHG + D+ TP  +  L+ +  VV
Sbjct: 511 QAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGL-KVV 569

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ ++    + + +V+V  
Sbjct: 570 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL--QDLDIVKVCC 627

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G +  VAL   G VYTWGKG    LGHG +     P+ L +L+    V
Sbjct: 628 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVV 675



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 29/282 (10%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    +   A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3835 LLESIQHV--FIRKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3888

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  SG++FT G       GH D+   + +P+LV+AL+G
Sbjct: 3889 VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQG 3947

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +    TP  I  L  +G V++
Sbjct: 3948 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLG-VIK 4006

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4007 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4064

Query: 334  HVVALDSSGY-----------------VYTWGKGYCGALGHG 358
            H V     G                  VYTWG    G LG G
Sbjct: 4065 HCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDG 4106



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2761 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 2820

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 2821 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-AKRIRDIACGS 2879

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 2880 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 2937

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2938 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 2973



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2789

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2790 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2849

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 2850 LGHFSRMNCDKPRLIEALKAKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 2907

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 2908 TTQLRPKLVKVLLGHRVIQ 2926



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 26/218 (11%)

Query: 154 FTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
           +  +N P      S+  V Q+  SE     +  SG V+T    S+              P
Sbjct: 399 YANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAP 447

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            L+ +L      ++ A  +   +L +   G V + G    G+LGHGDT     P  IA  
Sbjct: 448 MLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAF 507

Query: 266 --EEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             ++ G  VV IA G +Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG
Sbjct: 508 NGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KG 565

Query: 323 IHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           + VV V+  +GD   +A+  +G V++WG G  G LG G
Sbjct: 566 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 603



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 9/184 (4%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3833 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3892

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 3893 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 3951

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
             V   +GD   + L     V++WG G  G LG G       P  + SL       GL V+
Sbjct: 3952 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLT------GLGVI 4005

Query: 385  AEVC 388
               C
Sbjct: 4006 KVEC 4009



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2875 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 2933

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2934 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2992

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2993 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3051

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3094



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3812

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3872

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3873 DGKLGHGNRSPCDRPRVIESLR 3894



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 2945 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3003

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3004 DYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3062

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3063 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3096


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  H+++++ S  + +CG +  G LG G        F  +       +  V+A   
Sbjct: 108 KVACGGAHSMIVTESGRLLTCGLNDNGQLGLG-NLENASEFEEVK--GTESIADVAAGFW 164

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H     + G+++  G N     GH DT   +   P+ +  L+  P KQV  G   +  LT
Sbjct: 165 HTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALT 224

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVY 291
             G V+T G   HG+LGHG T D   PK +  L  VG ++  I AG  Y  AV+ +G V+
Sbjct: 225 KDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEAL--VGENISSIHAGFEYSSAVSTSGKVF 282

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G  + LG G++ D+L P  +         + +++ G  H  A+  SG ++TWG   
Sbjct: 283 VWGYGHFYVLGQGDKKDQLAPVVLDF----PTSIRQLAFGSFHAAAVSHSGMLFTWGHAT 338

Query: 352 CGALGHGDEIDKTLPEP 368
            G LGHG +    + EP
Sbjct: 339 HGPLGHGLKSPNIILEP 355



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 12/206 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + +V+    H+  V +SG++ TCG  DN     G+ +        +  E++       V 
Sbjct: 106 IKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIA-----DVA 160

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSY 280
           AG   T   + +G ++  GSN HGQLGH DT  +    P+ I  L +   + Q+A G  +
Sbjct: 161 AGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDA-PIKQVACGSYH 219

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VY++G G++  LGHG   DE  P+ ++     G ++  + AG E+  A+ +
Sbjct: 220 SMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALV--GENISSIHAGFEYSSAVST 277

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG V+ WG G+   LG GD+ D+  P
Sbjct: 278 SGKVFVWGYGHFYVLGQGDKKDQLAP 303



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 14/182 (7%)

Query: 200 TNRPIFR-----PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           T+ PIF      P  VE   L     K+V  G   +  +T  G + TCG N +GQLG G+
Sbjct: 81  TDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGN 140

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-- 310
             +    + +   E   S+  +AAG  + LA +  G +Y++GS  +  LGH +   +L  
Sbjct: 141 LENASEFEEVKGTE---SIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAV 197

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +P+ I   R   I   +V+ G  H +AL   G VYTWG G  G LGHG   D+ +P+ + 
Sbjct: 198 EPQEILLLRDAPIK--QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVE 255

Query: 371 SL 372
           +L
Sbjct: 256 AL 257



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 15/235 (6%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           +VE    ++   A   Q+  G YH++ L  +  V++ G    G LGHG    + +   R+
Sbjct: 196 AVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMP-KRV 254

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
                 ++  + A   +++ V  SG+VF  G    +  G  D      + +L   +   P
Sbjct: 255 EALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDK-----KDQLAPVVLDFP 309

Query: 218 C--KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSV 271
              +Q+  G      ++  G + T G  THG LGHG  L  P     P  +    ++ + 
Sbjct: 310 TSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG--LKSPNIILEPTVLDAPAQLQNS 367

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            Q+A G  + L VTG G V+SFG G    LG G   D  +P+ I  F  K +  V
Sbjct: 368 KQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQV 422


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 183 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTVEKDRI 310



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++    +  V 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 208

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 209 TIACGQMCCMAVV 221


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 21/262 (8%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------V 168
           +  GR+HTL +++S+ ++S G    G LGHG ET        +N P++   ++      +
Sbjct: 92  VAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETD-------LNMPTSIESLEDKDVNII 144

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H+A + ++G+++  G NS    G +  N  I  P +++  K V    V  G   T
Sbjct: 145 ACGGYHSAAITKNGELYIWGSNSEGQLGLK--NDTISYPTMLDLGKSVIS--VACGYYHT 200

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +T  G ++T G    G+LG GD       K        G VV++A G ++ +A+T +G
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASG 260

Query: 289 VVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            VY+FGSG N  LG G +  D   P+ ++   ++ I    ++ G+ H   +   G ++T+
Sbjct: 261 QVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIK--HIACGESHTAVVSDKGELFTF 318

Query: 348 GKGYCGALGHGDEIDKTLPEPL 369
           G G  G LG GDE    L +P+
Sbjct: 319 GDGRHGKLGQGDESFSNLFKPV 340



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 19/264 (7%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT++++ N  +F+ G++  G LG G   T+    T +       +  V+A   H
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTT-VKALKPEKITHVAAGRFH 98

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  S ++++ G  S    GH D    +  P  +E+L+      +  G   +  +T  
Sbjct: 99  TLAVTDSNKLYSFGQGSEGALGHGDET-DLNMPTSIESLEDKDVNIIACGGYHSAAITKN 157

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  GSN+ GQLG   DT+  PT      L+   SV+ +A G  +   VT +G +Y+F
Sbjct: 158 GELYIWGSNSEGQLGLKNDTISYPTM-----LDLGKSVISVACGYYHTAVVTADGKLYTF 212

Query: 294 GS--GSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALDSSGYVYTWGK 349
           G   G    LG  E H   +P+ +     KGI   VV+V+ G  H VAL +SG VYT+G 
Sbjct: 213 GETEGGKLGLGDIEAHKVTKPKVV-----KGISGKVVKVACGGNHTVALTASGQVYTFGS 267

Query: 350 GYCGALGHGDEI-DKTLPEPLSSL 372
           G  G LG G +I D  +P+ + +L
Sbjct: 268 GQNGQLGLGSKIMDSNIPKLVEAL 291



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + ++G VFT G  S F  G   TN+   R    + +  + C     G   T  +T  G +
Sbjct: 8   IPETGAVFTFG-KSRF--GDNRTNKFWIRS---DKVTDIAC-----GDEHTVVVTENGRL 56

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            T G+N  GQLG G    R  P ++  L+    +  +AAG  + LAVT +  +YSFG GS
Sbjct: 57  FTFGNNEWGQLGIGSNKTRNKPTTVKALKPE-KITHVAAGRFHTLAVTDSNKLYSFGQGS 115

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              LGHG++ D   P +I++   K +++  ++ G  H  A+  +G +Y WG    G LG
Sbjct: 116 EGALGHGDETDLNMPTSIESLEDKDVNI--IACGGYHSAAITKNGELYIWGSNSEGQLG 172



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 2/103 (1%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  + + VT NG +++FG+     LG G      +P  ++  + + I    V+A
Sbjct: 37  VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKI--THVAA 94

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G  H +A+  S  +Y++G+G  GALGHGDE D  +P  + SL+
Sbjct: 95  GRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLE 137



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 5/142 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G YHT +++ +  +++ G +  G LG G      V+  ++    +  VV+V+   
Sbjct: 191 ISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGG 250

Query: 173 NHAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           NH   +  SGQV+T   G N     G +  +  I  P+LVEAL     K +  G + T  
Sbjct: 251 NHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI--PKLVEALSKRKIKHIACGESHTAV 308

Query: 231 LTIRGHVHTCGSNTHGQLGHGD 252
           ++ +G + T G   HG+LG GD
Sbjct: 309 VSDKGELFTFGDGRHGKLGQGD 330


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 116/255 (45%), Gaps = 19/255 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASEN 173
           G++   L+ + SV++CGS+ CG LGH      PE    +   +I          VS    
Sbjct: 42  GQHSVFLMHDGSVYTCGSNSCGQLGHDKAGISPEVVGALDTQKITM--------VSCGRG 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V + GQ+F  G       G   T   +  PRLV+ L      QV  G      L+ 
Sbjct: 94  HSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR 153

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVY 291
            G + T G NT GQLG G     P+     PL+ +  +   QI AG  +  A++ +G V+
Sbjct: 154 DGQLFTWGQNTSGQLGLGK--GEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVF 211

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL   G ++T+G G 
Sbjct: 212 GWGKNRAGQLGLNDKQDRAVPCHIKFLRSQ--KVVYISCGDEHTAALTKDGGLFTFGDGS 269

Query: 352 CGALGHGDEIDKTLP 366
            G LGHG    + LP
Sbjct: 270 WGQLGHGSTNSELLP 284



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 7/259 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ GR H++ ++    +F+ G+   G LG G  T   V   R+      H + QV     
Sbjct: 88  VSCGRGHSMAVNEQGQLFAWGAGDGGQLGLG-TTETTVRIPRLVKRLCDHRISQVMCGNQ 146

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+FT G N+S   G          P  +++L G+P  Q+TAG + +  L++
Sbjct: 147 HCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSL 206

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++F
Sbjct: 207 SGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS-QKVVYISCGDEHTAALTKDGGLFTF 265

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G GS   LGHG  + EL PR +      G  V +++ G  H +A + SSG VY +G    
Sbjct: 266 GDGSWGQLGHGSTNSELLPRRV--LELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSH 323

Query: 353 GALGHGDEIDKTLPEPLSS 371
           G LG G   D   P P+ +
Sbjct: 324 GQLGTGILGDARSPFPVKT 342



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G++  G LG G E          +  S   + +V     H+ F++  G V+TCG NS   
Sbjct: 5   GNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNS--- 61

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT- 253
           CG    ++    P +V AL       V+ G   +  +  +G +   G+   GQLG G T 
Sbjct: 62  CGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 312
                P+ +  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TTVRIPRLVKRLCD-HRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D+ D+ +P  +  L
Sbjct: 181 HPLKSL--AGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFL 238

Query: 373 KSHLAV 378
           +S   V
Sbjct: 239 RSQKVV 244



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 76/158 (48%), Gaps = 7/158 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QIT G  H+  +S S +VF  G +  G LG   +  + V    I F  +  VV +S  + 
Sbjct: 193 QITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP-CHIKFLRSQKVVYISCGDE 251

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + + G +FT GD S    GH  TN  +  PR V  L G    Q+  G + T  F+ 
Sbjct: 252 HTAALTKDGGLFTFGDGSWGQLGHGSTNSELL-PRRVLELMGTEVSQIACGRHHTLAFVP 310

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEE 267
             G V+  G N+HGQLG G   D  +P   K+  P E+
Sbjct: 311 SSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSED 348



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H + +S +  +F+ G +  G LG G      +    +   +   + Q++A  +
Sbjct: 140 QVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGD 199

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+  +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HSFALSLSGAVFGWGKNRAGQLGLNDKQDRAV--PCHIKFLRSQKVVYISCGDEHTAALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G + T G  + GQLGHG T     P+ +  LE +G+ V QIA G  + LA V  +GVV
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTNSELLPRRV--LELMGTEVSQIACGRHHTLAFVPSSGVV 315

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT 317
           Y+FG  S+  LG G   D   P  ++T
Sbjct: 316 YAFGCNSHGQLGTGILGDARSPFPVKT 342


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 306 TPVTVEKDRI 315



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++    +  V 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 213

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 214 TIACGQMCCMAVV 226


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 21/260 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG  DE ++  P  L +L++
Sbjct: 230 LGLNDETNRAYPTQLKTLRT 249



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 346
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGKVYA 326

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGHG   ++ LP  +  L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMEL 299



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  VG VV+
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG 4289



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4258



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 24/278 (8%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           S G  QI       L++S +      +    +LG  P+  Q ++        + ++V+++
Sbjct: 451 SLGVTQIACAEKRFLILSRNGRVYTQAYNSDILG--PQLVQSLA--------SRNIVKIA 500

Query: 170 A-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----V 221
           A S+ H    L  +G+VF+  CGD      GH DT  P+  P+++ AL G    +    +
Sbjct: 501 AHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDT-VPLEEPKMISALSGKQAGKHVVHI 557

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSY 280
             G  ++  +T  G ++T G   +G+LGHG + D+  P  +  L+ +  + V   +G + 
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT NG V+S+G G    LG G       P+ I+    + + +V+VS G +  VAL  
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDIVKVSCGSQFSVALTK 675

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G VY+WGKG    LGHG E     P+ L  L+    +
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVI 713



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G+VF+
Sbjct: 3016 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G +++ G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV 3249

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3250 RKPQVVEGLRGKKIIHVAVGALHCLA 3275



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   VFS G    G LGHG       P+    +S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  +V+
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++ G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V AG  
Sbjct: 663 VSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGEKVIDVVAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     VY+WG        H D +  T P+P
Sbjct: 721 HCLALTEDSEVYSWGSN--DQCQHFDTLRITKPDP 753



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYSWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  ++ V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3206



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQ 3159



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4199



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4098

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++AG  H   + ++G +YTWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 4099 VDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     ++ +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIIHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H V+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVS 3327



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLR 4094



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+VS     + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVSCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V++ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 731 VYSWGSNDQCQ--HFDTLRITKPDPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3178 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3237 DYFRLGH-GTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3295

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ ++ T
Sbjct: 3296 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVSWT 3329


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 10/241 (4%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +  G +LC  LGHG    +      I       V+QV+    H + +  SGQ+++ G   
Sbjct: 2   WGTGFNLC--LGHGSHANEKYP-KPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
           +   GH +         L    K     Q+  G   + +LT  G +++ G   +G+LG+G
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +  D+ TP  +  L ++  V  +A G +   A TG G+++S+GSG + CLG G++ D L+
Sbjct: 119 ERHDQWTPNLVLRLRDL-VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLE 177

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEI--DKTLPE 367
           P  ++   R+   ++RV+ G+ H +AL   G ++ WG+G   C  LGH  E+     LP 
Sbjct: 178 PSLVRL--REEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHKLPM 235

Query: 368 P 368
           P
Sbjct: 236 P 236



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 9/242 (3%)

Query: 112 GNMQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G +Q+  G  H + L S+  ++S G  L G LGHG            +       VQ++ 
Sbjct: 31  GVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIAC 90

Query: 171 SENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              H+A++ Q G++++ G   N     G R      + P LV  L+ +    V  G N T
Sbjct: 91  GAAHSAYLTQDGKLYSWGRGLNGELGNGERHDQ---WTPNLVLRLRDLVVSYVACGTNTT 147

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              T  G + + GS  HG LG GD  DR  P S+  L E   ++++A G  + LA+T +G
Sbjct: 148 FACTGGGLLFSWGSGKHGCLGLGDREDRLEP-SLVRLREEDRIIRVACGEHHCLALTEDG 206

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++ +G G+  C G G   + L P  +     + I  V +S G  H   L   G ++ +G
Sbjct: 207 KLWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTI--VSMSCGRWHSAYLTIRGDIFCFG 264

Query: 349 KG 350
            G
Sbjct: 265 SG 266



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHG   +   PK I  L+E G V+Q+A GP +  A+  +G +YS+G G N  LGHG   
Sbjct: 10  LGHGSHANEKYPKPIKSLKEKG-VIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQ 68

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   P+ + +  +K    V+++ G  H   L   G +Y+WG+G  G LG+G+  D+  P 
Sbjct: 69  DSSAPKMLAS-TKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGERHDQWTPN 127

Query: 368 PLSSLK 373
            +  L+
Sbjct: 128 LVLRLR 133



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G+G N CLGHG   +E  P+ I++ + KG  V++V+ G +H  AL SSG +Y+WG G 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKG--VIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHL-AVQ 379
            G LGHG+  D + P+ L+S K +  AVQ
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQ 87


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3014 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3072

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3073 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3131

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3132 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3189

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3190 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 3247

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3248 RKPQVVEGLRGKKIVHVAVGALHCLA 3273



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+SV+H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4034 LLESVQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4087

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4088 VVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4146

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4147 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4205

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4206 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4263

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4264 HCVCCTEDGEVYTWGDNDEGQLGDG 4288



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3058 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3116

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3117 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3175

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3234

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3235 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3292

Query: 357  HG 358
            +G
Sbjct: 3293 NG 3294



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDVAAGG 4104

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4163

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4257



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +   +  P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-PVLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++++++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGL-KVI 607

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 665

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3020

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3021 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3080

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3081 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3138

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3139 TTQLKPKMVKVLLGHRVIQ 3157



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2992 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3049

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3050 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3108

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3109 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3166

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3167 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3204



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   NS               P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNSD-----------ALAPQLVQGLASRNIIKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE+ P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 4/214 (1%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3987 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESVQHVFIKK 4045

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ +  L  +  VV +AAG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGI-EVVDVAAGG 4104

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4164

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 V++WG G  G LG G      +P  + SL
Sbjct: 4165 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4198



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3106 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3164

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3165 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3223

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3224 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3282

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3283 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3325



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4072 DGKLGHGNRSPCDRPRVVESLR 4093



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4214

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3166 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3224

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3225 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3283

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3284 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3327



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNS----------DALAPQLVQGLASRNIIKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 279 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 332

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 333 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 391

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 392 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 450

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 451 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 508

Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
           H V     G VYTWG    G LG G
Sbjct: 509 HCVCCTEDGEVYTWGDNDEGQLGDG 533



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 291 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 349

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 350 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 408

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 409 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 466

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 467 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 502



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 277 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 336

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 337 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 395

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 396 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 443



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 256

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 257 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 316

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LGHG+      P  + SL+
Sbjct: 317 DGKLGHGNRSPCDRPRVIESLR 338



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 401 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 459

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 460 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 518

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 519 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 564


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 18/216 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T+
Sbjct: 288 HAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTM 346

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G +
Sbjct: 347 TGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQL 405

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+            
Sbjct: 406 FTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTQSTSSI 463

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           SSG ++TWG G    LGHGD+  +  P  +S+L  H
Sbjct: 464 SSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDH 499



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     +  VS  
Sbjct: 334 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 392

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +F PR VE+L G+    V  G+     +
Sbjct: 393 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 451

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  ++ L +  +  ++A G S 
Sbjct: 452 VEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALID-HTFHRVACGHSL 510

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S
Sbjct: 511 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLIKDC-VEEIACGAYHVAVLTS 568

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 569 RNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLK 601



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 389 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 446

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           HAA +++           SG++FT GD      GH D    + +P  V AL      +V 
Sbjct: 447 HAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL-KPTCVSALIDHTFHRVA 505

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 506 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLIKDCVEEIACGAYHVA 564

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    V+++G G+N  LGHG+  D   P  + T + +  HV  ++ G     A+
Sbjct: 565 VLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKER--HVKNIACGSNFTAAI 618



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 10/217 (4%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           + ++ C G R     +  P+ +E+   +    +  G+     ++ +G V T G  + G+L
Sbjct: 253 EKNATCVGSRSD---VLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRL 309

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   D   P+ I  L    SV  +A G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 310 GHGMGKDVTGPQLIESLAAT-SVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTD 368

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P+ I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     P
Sbjct: 369 VSHWIPKRI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYP 427

Query: 367 ---EPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
              E LS L++     G+   A +   IV + T S S
Sbjct: 428 REVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSIS 464



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 290 VYSFGSGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           V  FG+  N  C+G   + D L P+ +++     +H   ++ G  H   +   G V+TWG
Sbjct: 247 VAKFGAEKNATCVG--SRSDVLIPKPLESNVVLDVH--HIACGVRHAALVSRQGEVFTWG 302

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
           +   G LGHG   D T P+ + SL
Sbjct: 303 EASGGRLGHGMGKDVTGPQLIESL 326


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 18/217 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 288 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 346

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 464

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                     SSG ++TWG G    LGHGD+  +  P
Sbjct: 465 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 501



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 19/273 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 344 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 403

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 404 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 462

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 463 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 521

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 522 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 579

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 580 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALK 612



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 20/237 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + VS    
Sbjct: 399 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVW 456

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 457 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 515

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 516 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 574

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 575 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDR--HVKYIACGSNYTAAI 629



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 9/191 (4%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 270 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 329

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 330 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 389

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 390 -SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL----- 443

Query: 378 VQGLSVLAEVC 388
             GL  +A  C
Sbjct: 444 -SGLRTIAVSC 453


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 18/217 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                     SSG ++TWG G    LGHGD+  +  P
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 496



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 19/273 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALK 607



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 20/237 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + VS    
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVW 451

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 510

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDR--HVKYIACGSNYTAAI 624



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 9/191 (4%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 385 -SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL----- 438

Query: 378 VQGLSVLAEVC 388
             GL  +A  C
Sbjct: 439 -SGLRTIAVSC 448


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4011 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4064

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4065 VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4123

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4124 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4182

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4183 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4240

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4241 HCVCCTEDGEVYTWGDNDEGQLGDG 4265



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 120/238 (50%), Gaps = 22/238 (9%)

Query: 145 GPETTQCVSFTRINFPSAAHVVQVSA-SENHAAFVLQS-GQVFT--CGDNSSFCCGHRDT 200
           GP+  Q ++        + ++V+++A S+ H    L + G+VF+  CGD      GH DT
Sbjct: 460 GPQLVQSLA--------SRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRL--GHGDT 509

Query: 201 NRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
             P+  P+L+ AL G    +    +  G  ++  +T  G ++T G   +G+LGHG + D+
Sbjct: 510 -VPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQ 568

Query: 257 PTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             P  +  L+ +  + V   +G +  LAVT NG V+S+G G    LG G       P+ I
Sbjct: 569 TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 628

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +    + + +V+V  G +  +AL   G VYTWGKG    LGHG E     P+ L  LK
Sbjct: 629 EKL--QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLK 684



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+    +S  
Sbjct: 469 SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGK 524

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 525 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 579

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  +V+
Sbjct: 580 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVK 638

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  
Sbjct: 639 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGST 696

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 697 HCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 729



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4023 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4081

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4082 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4140

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4141 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4198

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4199 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4234



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G++F+
Sbjct: 2992 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3050

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3051 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3109

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3110 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3167

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3168 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV 3225

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3226 RKPQVVEGLRGKKIVHVAVGALHCLA 3251



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3036 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3094

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3095 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3153

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3212

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3213 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3270

Query: 357  HG 358
            +G
Sbjct: 3271 NG 3272



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2998

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2999 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3058

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3059 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3116

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3117 TTQLKPKMVKVLLGHRVIQ 3135



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 478

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 596

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 597 VTENGQVWSWGDGDYGKLGRG 617



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2970 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3027

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3028 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3086

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3144

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3145 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3182



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG               + ++
Sbjct: 3890 MADNEHMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG--------------SGTI 3935

Query: 132  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            +  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  +
Sbjct: 3936 YGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3994

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+LG
Sbjct: 3995 GGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            HG+      P+ I  L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+
Sbjct: 4054 HGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQ 4112

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  +
Sbjct: 4113 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4172

Query: 370  SSL 372
             SL
Sbjct: 4173 DSL 4175



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3142

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3143 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3201

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3202 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3260

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3303



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3988

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3989 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4048

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4049 DGKLGHGNRSPCDRPRVIESLR 4070



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 647

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 648 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 707 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 752



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4133 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4191

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4192 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4250

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4251 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4296



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3154 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3212

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3213 DYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3271

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3272 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3305



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 479

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A
Sbjct: 480 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQA 526


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 109 TSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           T AG   +  G  +T+ +++S   ++S G    G LGHG E         I F S   V 
Sbjct: 60  TDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHG-ECGDVFVPRPIAFFSGRPVA 118

Query: 167 QVSASENHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           +V+  + H   V Q  G ++T G N +   G   TN     P+LV AL+G     V  G 
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTN-DCLSPQLVTALQGERVSSVACGS 177

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +   T  G V + G   +G LG GD+ DR TP  +  L+ V +V  +  G  +   VT
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGV-TVTSVVCGWRHSAVVT 236

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             G V++FG      LGHG+  D  +P  +   +     V  V+ G  H +A DS G +Y
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQH--CRVSTVAGGWRHTMAADSEGNLY 294

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSL 372
            WG    G LG GD  D+  P P++  
Sbjct: 295 AWGWNKFGQLGLGDSEDRAAPTPVAGF 321



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 15/260 (5%)

Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  G  HTL+++  + ++++ G +  G LG G  T  C+S   +       V  V+   
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLG-HTNDCLSPQLVTALQGERVSSVACGS 177

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+    ++G VF+ G       G  D+ +  + P  V  L GV    V  G   +  +T
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDS-QDRYTPTRVVGLDGVTVTSVVCGWRHSAVVT 236

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G + +GQLGHGD +D   P  +A L+    V  +A G  + +A    G +Y+
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHC-RVSTVAGGWRHTMAADSEGNLYA 295

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGI----------HVVRVSAGDEHVVALDSSG 342
           +G      LG G+  D   P  +  F   G            V  ++ G  H VA+  +G
Sbjct: 296 WGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG 355

Query: 343 YVYTWGKGYCGALGHGDEID 362
            VY+WG+G  G LGHG E D
Sbjct: 356 EVYSWGRGVNGQLGHGAEQD 375



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV-TGNGVVYSF 293
           G V + G    GQLGHG      +P  IA L + G V  +  G  Y +AV +  G +YS+
Sbjct: 29  GVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAG-VDAVVCGAEYTVAVASSRGQIYSW 87

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTWGKGYC 352
           G G    LGHGE  D   PR I  F   G  V RV+ GD H +V     G +YT+G+   
Sbjct: 88  GWGDFGRLGHGECGDVFVPRPIAFF--SGRPVARVACGDTHTLVVTQGDGALYTFGRNQN 145

Query: 353 GALGHGDEIDKTLPEPLSSLK 373
           G LG G   D   P+ +++L+
Sbjct: 146 GQLGLGHTNDCLSPQLVTALQ 166



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 3/106 (2%)

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +E   V+ ++ G S+ +A+   GVV S+G G +  LGHG+      P  I      G+  
Sbjct: 7   QEEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDA 66

Query: 326 VRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           V   A  E+ VA+ SS G +Y+WG G  G LGHG+  D  +P P++
Sbjct: 67  VVCGA--EYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIA 110


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 18/217 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                     SSG ++TWG G    LGHGD+  +  P
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 496



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 19/273 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALK 607



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 20/237 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + VS    
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVW 451

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 510

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDR--HVKYIACGSNYTAAI 624



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 9/191 (4%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 385 -SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL----- 438

Query: 378 VQGLSVLAEVC 388
             GL  +A  C
Sbjct: 439 -SGLRTIAVSC 448


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    +   A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4029 LLESIQHV--FIRKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4082

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  SG++FT G       GH D+   + +P+LV+AL+G
Sbjct: 4083 VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQG 4141

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4142 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VVK 4200

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4201 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4258

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4259 HCVCCTEDGEVYTWGDNDEGQLGDG 4283



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4041 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4099

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4100 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4158

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4159 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4216

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4252



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3053 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3111

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3112 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGF 3170

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3171 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3229

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3230 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3287

Query: 357  HG 358
            +G
Sbjct: 3288 NG 3289



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 22/268 (8%)

Query: 131  VFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            +++CG +  G LG G      P   Q  + +       A    V +   HA  +   G+V
Sbjct: 3010 IYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVA----VHSGGRHAMALTVDGKV 3065

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G +++ G   
Sbjct: 3066 FSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3124

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCL 301
            +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G V+S+G G    L
Sbjct: 3125 YGRLGHGDNTTQLRPKLVKVL--LGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKL 3182

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++
Sbjct: 3183 GRGGSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3240

Query: 362  DKTLPEPLSSLKS----HLAVQGLSVLA 385
                P+ +  L+     H+AV  L  LA
Sbjct: 3241 HVRKPQMVEGLRGKKIVHVAVGALHCLA 3268



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVVQVSASENH 174
           G+++  L SN  VFS G    G LGHG +TT       I       +  HVV V+    +
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
           +A +   G+++T G  +    GH  +      P +V A KG+    V  G      L + 
Sbjct: 554 SAAITADGELYTWGRGNYGRLGHGSSEDQT-TPMVVTAFKGLKVVDVACGSGDAQTLAVT 612

Query: 234 -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY+
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYT 671

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G N  LGHG       P+ + +   +G  VV V+ G  H +AL   G V +WG    
Sbjct: 672 WGKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDVAVGSTHCLALTDDGEVLSWGSN-- 727

Query: 353 GALGHGDEI--DKTLPEPLSSLKS 374
             L H D +  +K  P+ L  L S
Sbjct: 728 DKLQHFDTLFSNKKQPKALPGLNS 751



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 16/232 (6%)

Query: 157 INFPSAAHVVQVSASEN--HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEA 212
           I+  S+  +V+++A  +  H   +  +G+VF+  CGD      GH DT   +  P+++  
Sbjct: 478 IHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRL--GHGDTTY-LEEPKMIGT 534

Query: 213 LKGVPCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
             G    +    V  G  ++  +T  G ++T G   +G+LGHG + D+ TP  +   + +
Sbjct: 535 FNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGL 594

Query: 269 GSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             VV +A  +G +  LAVT NG V+S+G G    LG G       P+ ++    + + +V
Sbjct: 595 -KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL--QDLDIV 651

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +V  G +  VAL   G VYTWGKG    LGHG +     P+ L SL+    V
Sbjct: 652 KVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVV 703



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2987 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKK 3046

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3047 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3105

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3106 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3163

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G+V++WG G  G LG G      +P+ +  L
Sbjct: 3164 ALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERL 3199



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3015

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3016 ATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3075

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3076 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3133

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3134 TTQLRPKLVKVLLGHRVIQ 3152



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 26/218 (11%)

Query: 154 FTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
           +  +N P      S+  V Q+  SE     +  SG V++    S+              P
Sbjct: 427 YANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYKST-----------TLAP 475

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            L+  L      ++ A  +   +L +   G V + G    G+LGHGDT     PK I   
Sbjct: 476 MLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTF 535

Query: 266 --EEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             ++ G  VV +A G +Y  A+T +G +Y++G G+   LGHG   D+  P  +  F  KG
Sbjct: 536 NGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAF--KG 593

Query: 323 IHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           + VV V+  +GD   +A+  +G V++WG G  G LG G
Sbjct: 594 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 631



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4027 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4086

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4087 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4145

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4146 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL 4193



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3101 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3159

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3160 AQTLALTDEGFVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3218

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3219 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3277

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3320



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P S   L  +   VQ+  G   + AVT +G +Y+ G
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATL-RPVQLIGGEQTLFAVTADGKLYATG 4009

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+   G 
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069

Query: 355  LGHGDEIDKTLPEPLSSLK 373
            LGHG+      P  + SL+
Sbjct: 4070 LGHGNRSPCDRPRVIESLR 4088



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3171 VFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3229

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3230 DYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3288

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3289 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3322



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4151 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4268

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4269 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4314


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+E+L G+    +  G
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIESLSGIGVVDIACG 4236

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +TI+GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4237 SAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4296

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4297 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4354

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG+      P+ +++L+
Sbjct: 4355 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQ 4384



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 22/285 (7%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3064 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3119

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3120 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3177

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 284
             +  +T  G ++T G   +G+LGHGD   +  PK +  L++   VVQ+A G   +  L +
Sbjct: 3178 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQD-HRVVQVACGSRDAQTLCL 3236

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T +G+V+S+G G    LG G       P   Q  R  G+ V+++  G +  +AL  +G V
Sbjct: 3237 TEDGLVFSWGDGDFGKLGRGGSEGCSIPH--QVDRLNGVGVMQIECGAQFSLALTKAGEV 3294

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            +TWGKG    LGHG +     P P+  L+     H+AV  L  LA
Sbjct: 3295 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3339



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 116/257 (45%), Gaps = 21/257 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3124 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--------DIACG 3175

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+LV AL+     QV  G     T 
Sbjct: 3176 SSHSAAITSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTALQDHRVVQVACGSRDAQTL 3234

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P  +  L  VG V+QI  G  + LA+T  G 
Sbjct: 3235 CLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVG-VMQIECGAQFSLALTKAGE 3293

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG VY WG 
Sbjct: 3294 VWTWGKGDYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQVYAWGD 3351

Query: 350  GYCGALGHGDEIDKTLP 366
               G  G G+ I    P
Sbjct: 3352 NDHGQQGSGNTIVNKKP 3368



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 20/282 (7%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   VV +
Sbjct: 4178 KVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIESLSGIGVVDI 4233

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +   G V T G       GH D+   + +P+LVEAL G     +  G    
Sbjct: 4234 ACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDA 4292

Query: 229  GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T 
Sbjct: 4293 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTR 4351

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+T
Sbjct: 4352 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVFT 4409

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            WG    G LG G       P  + SL      QG  ++  +C
Sbjct: 4410 WGDNDEGQLGDGTVSAIQRPRLVQSL------QGKHIVKVIC 4445



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 11/233 (4%)

Query: 149 TQCVSFTRINFPSAAH-----VVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           +  +S T  N+P+        +VQ++A     H   +  SG V++ G       GH DT+
Sbjct: 588 SHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTS 647

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
                P  + AL       V  G +++  +T  G ++T G  T+G+LGHG++ D+  P  
Sbjct: 648 AKEL-PTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTL 706

Query: 262 IAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  L+    V V +  G ++ L VT  G+ +++G G    LG+        P  +Q    
Sbjct: 707 VTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVP--VQVDLP 764

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +   VV+V +G +  VAL   G VYTWGKG+ G LGHG+     +P+ + +L+
Sbjct: 765 QASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALE 817



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 7/233 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L S+  V+S GS   G LGHG  + + +  TRI   +   V  V    +++A +
Sbjct: 618 GRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELP-TRIAALADRQVTGVFCGSSYSAAI 676

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 236
             SG+++T G  +    GH ++    + P LV ALK      V  G      L  T  G 
Sbjct: 677 TASGELYTWGRGTYGRLGHGNSEDK-YVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
               G    G+LG+   +    P  +  L +   VV++ +G  + +A+T  G VY++G G
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQVD-LPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               LGHG       P+ +Q    +G  +V ++ G  H +AL +SG +Y WG+
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQAL--EGKKIVDLAVGLAHCLALTASGELYGWGR 845



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 9/248 (3%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S++F  G +  G LG G + ++  + T     S    +Q++  E     V   G+++  G
Sbjct: 4089 STIFGWGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATG 4147

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              +    G   T+  +  P LVE+L+ V  K+V   +G      L+  G V + G    G
Sbjct: 4148 YGAGGRLGVGGTDS-VTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4206

Query: 247  QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            +LGHG  D+ DRP  K I  L  +G VV IA G ++   +T  G V ++G G    LGHG
Sbjct: 4207 KLGHGNRDSYDRP--KLIESLSGIG-VVDIACGSAHSACITIQGHVLTWGKGRYGRLGHG 4263

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            +  D+LQP+ ++         +   +GD   + +     V++WG G  G LG G      
Sbjct: 4264 DSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCK 4323

Query: 365  LPEPLSSL 372
            +P  + SL
Sbjct: 4324 VPMKIESL 4331



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 4091 IFGWGHNHRGQLGGLDGSR-IKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4149

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4150 AGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            HG +    +P+ I++    GI VV ++ G  H   +   G+V TWGKG  G LGHGD  D
Sbjct: 4210 HGNRDSYDRPKLIESL--SGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSED 4267

Query: 363  KTLPEPLSSLKSHLAV 378
            +  P+ + +L  + A+
Sbjct: 4268 QLQPKLVEALLGYRAI 4283



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 4/111 (3%)

Query: 270 SVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           ++VQ+AA     ++LA+  +G VYS+GSG    LGHG+   +  P  I     +   V  
Sbjct: 608 TIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADR--QVTG 665

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V  G  +  A+ +SG +YTWG+G  G LGHG+  DK +P  +++LK+H  V
Sbjct: 666 VFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVV 716



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 5/144 (3%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 3026 VSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 3082

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+ G G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142

Query: 351  YCGALGHGDEIDKTLPEPLSSLKS 374
              G LGHG+ +    P+ + +L++
Sbjct: 3143 EDGKLGHGNRLTLEKPKLIETLRT 3166



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 3/159 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L  +  VFS G    G LG G  +  C    +++  +   V+Q+      +  + ++G+V
Sbjct: 3236 LTEDGLVFSWGDGDFGKLGRG-GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEV 3294

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    +  GH  T++ + +P  ++ L+G     V  G      +T  G V+  G N 
Sbjct: 3295 WTWGKGDYYRLGH-GTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDND 3353

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            HGQ G G+T+    P  +  L+ +  V ++A G S+ +A
Sbjct: 3354 HGQQGSGNTIVNKKPSLVLGLDGI-FVNRVACGSSHSVA 3391



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%)

Query: 119 GRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFT---RINFPSAAHVVQVSASENH 174
           G  H+L ++ + + F+ G    G LG+      CV  +   +++ P A+ VV+V +    
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGN----ESCVGTSVPVQVDLPQASCVVKVFSGSQF 778

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  + + G V+T G       GH ++   P+  P++V+AL+G     +  GL     LT 
Sbjct: 779 SVALTREGTVYTWGKGHGGRLGHGNSEHSPV--PKMVQALEGKKIVDLAVGLAHCLALTA 836

Query: 234 RGHVHTCGSNTHGQL 248
            G ++  G N   Q+
Sbjct: 837 SGELYGWGRNDFQQI 851



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            ++   L  + SV++ G      LGHG  T       ++       ++ ++    H     
Sbjct: 4344 QFSVALTRSGSVYTWGKGDYHRLGHG-NTDHVRRPKKVAALQGKKIISIATGSLHCVACS 4402

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             +G+VFT GDN     G   T   I RPRLV++L+G    +V  G
Sbjct: 4403 DAGEVFTWGDNDEGQLGD-GTVSAIQRPRLVQSLQGKHIVKVICG 4446


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 15/250 (6%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G  E     +   +NF  A  + Q++  +N+   V + GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     G     +   R +L+  +  +  ++   G + T  +   G + + GSN  GQLG
Sbjct: 61  NDHGQLGQEKGRK---RLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLG 117

Query: 250 HGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG- 304
               LDR +     P  ++ +G+  +VQIA G  + +A+T NG +Y++GS S+  LG G 
Sbjct: 118 ----LDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           +   EL+P+ + +     + +  V+ G  H + +  SG V+ WG+   G LG  D  ++ 
Sbjct: 174 DTKMELKPKLVHSL--AAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231

Query: 365 LPEPLSSLKS 374
           +P  L +L++
Sbjct: 232 VPCQLRTLRN 241



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTL+++    +FS GS++ G LG    +        +       +VQ++    H+  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G+++  G NS    G     +   +P+LV +L  VP   V  G   T  ++  G V
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAV 211

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  D  +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRN-SRVCYAACGEEFSVFLTMDGGVFTCGAGM 270

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG +  E+ PR I      G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 271 YGQLGHGNKTSEILPRQIMEL--MGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328

Query: 357 HGDEIDKTLPE 367
           +    + T P+
Sbjct: 329 NRIAQNSTTPQ 339



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 14/270 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAHVVQVSA 170
           QI  G  +T+ ++    V+SCG++  G LG   G +  Q +S    + F  AA       
Sbjct: 38  QIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGIDPLAFRKAA------C 91

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H   V + GQ+F+ G N     G    +  I  PR+V+ L      Q+  GL  +  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 231 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G ++  GSN+ GQLG G DT     PK +  L  V  +  +A G  + + ++ +G 
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAV-PIAFVACGGYHTIVISKSGA 210

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  +   LG  +  +   P  ++T R     V   + G+E  V L   G V+T G 
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNS--RVCYAACGEEFSVFLTMDGGVFTCGA 268

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LGHG++  + LP  +  L      Q
Sbjct: 269 GMYGQLGHGNKTSEILPRQIMELMGSTVTQ 298



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G YHT++IS S +VF+ G +  G LG      + V   ++     + V   +  E  
Sbjct: 195 VACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVP-CQLRTLRNSRVCYAACGEEF 253

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH +    I  PR +  L G    Q++ G   T   +  
Sbjct: 254 SVFLTMDGGVFTCGAGMYGQLGHGNKTSEIL-PRQIMELMGSTVTQISCGRRHTLALVPS 312

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+    +  TP+ +
Sbjct: 313 RGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 112/218 (51%), Gaps = 19/218 (8%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G      +T
Sbjct: 322 KHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACGEYHACAVT 380

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G +++ G  TH  G LGHG+ +    PK +  PLE +  V  IA GP +   VT  G+
Sbjct: 381 LSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGL-RVASIACGPWHTALVTTTGL 439

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 338
           +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+           
Sbjct: 440 LFTFGDGTFGVLGHNDRKSAYSPREVESL--KGLRTVRAACGVWHTAAVVEVMVGSSSAG 497

Query: 339 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             SSG ++TWG G  G LGHGD+  + +P  +++L  H
Sbjct: 498 SCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDH 535



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S  ++S G      G+LGHG + +  +   R+N P     V  ++  
Sbjct: 369 VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIP-KRVNGPLEGLRVASIACG 427

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G +FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 428 PWHTALVTTTGLLFTFGDGTFGVLGHND-RKSAYSPREVESLKGLRTVRAACGVWHTAAV 486

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L +  +  Q+A G S
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVD-HNFRQVACGYS 545

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G V++ GS +   LG   Q D   P  ++  +    +V  ++ G  HV  L 
Sbjct: 546 LTVALTTKGGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVEDIACGAHHVAVLT 603

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +  VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 604 HNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALK 637



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 16/228 (7%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT L++ + + F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 424 IACGPWHTALVTTTGLLFTFGDGTFGVLGHN-DRKSAYSPREVESLKGLRTVRAACGVWH 482

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 483 TAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV-PTCVAALVDHNFRQVA 541

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT +G V T GS+T+GQLG     D   P  +        V  IA G  ++ 
Sbjct: 542 CGYSLTVALTTKGGVFTMGSSTYGQLGD-PQADGKLPGLVEGKLVEAYVEDIACGAHHVA 600

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +T N  VY++G G+N  LGHG+  D   P  ++  + K +  +   A
Sbjct: 601 VLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGA 648



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 4/169 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +YS+G G++    LGHG       P+ +     +G+ 
Sbjct: 363 SSTTEV-VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLEGLR 420

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK
Sbjct: 421 VASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLK 469


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 11/248 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G    + +   R ++F  A  V Q++  EN+   +   GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH    +   R +L+  L     K++  G   T  +   G + + G N  GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
               D  +R TP+ +  L     +VQIA G  + +A+T +G +YS+GS     LG G   
Sbjct: 118 LNSVDCTER-TPRMVKAL-GTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHT 175

Query: 308 -DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             E++P+ I T     + +  ++ G  H V +  SG V+ WG+   G LG  D   + +P
Sbjct: 176 VTEIKPKRIITL--AAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVP 233

Query: 367 EPLSSLKS 374
             L +L++
Sbjct: 234 CQLRTLRN 241



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 8/267 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  +T+ I+N   V+SCG++  G LGH     +      ++   A    +++    
Sbjct: 38  QIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLD---AFVFKKIACGSC 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V + GQ+F+ G N     G    +     PR+V+AL      Q+  G+  +  LT 
Sbjct: 95  HTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN 154

Query: 234 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G +++ GSN  GQLG G  T+    PK I  L  V  +  IA G  + + ++ +GVV++
Sbjct: 155 DGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAV-PIAFIACGGYHTVVISKSGVVFA 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  +   LG  +    + P  ++T R     V   + G+E  V L   G V+T G G  
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNA--KVCYAACGEEFSVFLTLDGGVFTCGAGMY 271

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G LGHG+ +++ LP  +  L      Q
Sbjct: 272 GQLGHGNGMNEILPRQVMELMGSTVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 9/256 (3%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSAS 171
           +I  G  HTL ++    +FS G ++ G LG    +  C   T   +     + +VQ++  
Sbjct: 88  KIACGSCHTLAVNEWGQLFSWGCNMKGQLGLN--SVDCTERTPRMVKALGTSVIVQIACG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   G++++ G N     G         +P+ +  L  VP   +  G   T  +
Sbjct: 146 IEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVI 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G V   G NT GQLG  DT  R  P  +  L     V   A G  + + +T +G V+
Sbjct: 206 SKSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTLRN-AKVCYAACGEEFSVFLTLDGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           + G+G    LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G
Sbjct: 265 TCGAGMYGQLGHGNGMNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLG 322

Query: 351 YCGALGHGDEIDKTLP 366
             G LG+      T P
Sbjct: 323 GAGQLGNRASRSATTP 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 6/205 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++N   ++S GS+  G LG G  T   +   RI   +A  +  ++   
Sbjct: 140 VQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + +SG VF  G N+    G  DT + I  P  +  L+         G  F+ FLT
Sbjct: 200 YHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIV-PCQLRTLRNAKVCYAACGEEFSVFLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
           + G V TCG+  +GQLGHG+ ++   P+ +  +E +GS V QI+ G  + LA V   G V
Sbjct: 259 LDGGVFTCGAGMYGQLGHGNGMNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRGRV 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAI 315
           Y++G G    LG+        P  +
Sbjct: 317 YAWGLGGAGQLGNRASRSATTPLVV 341


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 835  LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 888

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 889  VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 947

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 948  HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1006

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1007 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1064

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 1065 HCVCCTEDGEVYTWGDNDEGQLGDG 1089



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 847  VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 905

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 906  AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 964

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 965  LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1022

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 1023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 1058



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 833 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 892

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 893 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 951

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 952 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 999



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PRL+EALK    + +  G + +  LT  G ++T G   +G+LGHGD   +  PK +  L
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 266 EEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G       P+ I+  R  G
Sbjct: 65  --LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNG 120

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
             V ++  G +  +AL  SG V+TW     G   HG +
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ 158



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 812

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 872

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LGHG+      P  + SL+
Sbjct: 873 DGKLGHGNRSPCDRPRVIESLR 894



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P+ I  L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++  
Sbjct: 6   PRLIEALK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 319 RRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              G  V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 65  L--GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 118



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 957  SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1015

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1016 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1074

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1075 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1120



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ + 
Sbjct: 5   KPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 62

Query: 371 SLKSHLAVQ 379
            L  H  +Q
Sbjct: 63  VLLGHRVIQ 71



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 11/178 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 20  IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 78

Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 79  AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 137

Query: 233 IRG-----HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             G      V+  G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 138 KSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 194


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 106/217 (48%), Gaps = 18/217 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  +  GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                     SSG ++TWG G    LGHGD+  +  P
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 496



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 19/273 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  V+   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGP 398

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-RETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTLVEALK 607



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 20/237 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI S   +F+ G    GVLGHG   T  V + R +   S    + VS    
Sbjct: 394 VTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRET--VQYPREVESLSGLRTIAVSCGVW 451

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 510

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDR--HVKYIACGSNYTAAI 624



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 9/191 (4%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  V+ G  H   + S G ++T+G G  G LGHGD      P  + SL     
Sbjct: 385 C-LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESL----- 438

Query: 378 VQGLSVLAEVC 388
             GL  +A  C
Sbjct: 439 -SGLRTIAVSC 448



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++  VF+ GS++ G LG+     +          S   V ++S    H A +    +V
Sbjct: 520 LTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASE-FVEEISCGAYHVAALTSRNEV 578

Query: 185 FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +T G  ++   GH D  +R +  P LVEALK    K +  G N+T  + +   V
Sbjct: 579 YTWGKGANGRLGHGDLEDRKV--PTLVEALKDRHVKYIACGSNYTAAICLHKWV 630


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 143/277 (51%), Gaps = 11/277 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1700

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1701 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1759

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE    + Q+A G ++ LAV+ +G +
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 1818

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 1819 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 1876

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
                 L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 1877 DRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 1912



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 1704 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 1762

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 1763 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 1821

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 1822 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 1880

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 1881 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 1937



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 1641 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 1700

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 1701 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 1758

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 1759 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 1797



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 1748 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 1806

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 1807 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 1863

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 1864 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 1921

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 1922 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 1968



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 1801 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 1859

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 1860 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 1915

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 1916 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 1974


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 143/277 (51%), Gaps = 11/277 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
           Q+  G+  T +I +N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 244

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 245 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 303

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G + T G+  +G+LG G+T ++  P+ +  LE    + Q+A G ++ LAV+ +G +
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 362

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 363 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 420

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
                L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 421 DRLIGLPEGRARNHNRPQQIPVL-AGVVIEDVAVGAE 456



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 248 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-RQIEALQGEEVVQMSCGFKHSAVVTS 306

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-HVHT 239
            G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 307 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 365

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 366 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 424

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            L  G   +  +P+ I      G+ +  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 425 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 481



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
           +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 185 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 244

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 245 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 302

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 303 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 341



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 292 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 350

Query: 173 NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 351 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 407

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
            LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 408 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 465

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 466 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 512



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 345 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 403

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 404 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 459

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 460 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 518


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 115/244 (47%), Gaps = 9/244 (3%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F    +V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + R   +P  V AL       V+ G   T  L  +G V + G   +GQ+G    
Sbjct: 65  QLGHDKSRR---KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTA 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++ +  ++S+G      LG G E   E  
Sbjct: 122 EEYIRVPRNIKSLSDV-QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           PR I++    GI    ++AG  H  AL  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PRHIKSL--SGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKS 238

Query: 372 LKSH 375
           L+S 
Sbjct: 239 LRSQ 242



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 240 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STNHEVNPRKVFELMGSIVTQ 298



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 379 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 432

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 433 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 491

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 492 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 550

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 551 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 608

Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
           H V     G VYTWG    G LG G
Sbjct: 609 HCVCCTEDGEVYTWGDNDEGQLGDG 633



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 391 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 449

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 450 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 508

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 509 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 566

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 567 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 602



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 377 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 436

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 437 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 495

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 496 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 543



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 356

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 357 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 416

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LGHG+      P  + SL+
Sbjct: 417 DGKLGHGNRSPCDRPRVIESLR 438



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 501 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 559

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 560 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 618

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 619 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 664


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 301 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 354

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 355 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 413

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 414 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 472

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 473 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 530

Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
           H V     G VYTWG    G LG G
Sbjct: 531 HCVCCTEDGEVYTWGDNDEGQLGDG 555



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 313 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 371

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 372 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 430

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 431 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 488

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 489 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 524



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 299 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 358

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 359 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 418 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 465



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 278

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 279 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 338

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LGHG+      P  + SL+
Sbjct: 339 DGKLGHGNRSPCDRPRVIESLR 360



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 423 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 481

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH  ++  + RPR V+ L+G     +  G       T  G 
Sbjct: 482 ALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 540

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 541 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 586


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 5/244 (2%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           ++ ++ + GS+  G LG+G  TT   +   ++ P+    V ++A + H+  +  +G V  
Sbjct: 52  ASDTILAWGSNFFGELGNG-TTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLA 110

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            GDNS    G   T      P  V    GV    V AG + +  LT  G V   G N+ G
Sbjct: 111 WGDNSHGQLGD-GTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAWGGNSFG 169

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G  +DR TP ++A L    +V  +AAG ++ +A+T  G V ++G      LG G  
Sbjct: 170 QLGDGTVVDRSTPVAVA-LPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQLGDGTV 228

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            D   P A+         V  V+AG  H VAL S+G V  WG+ + G LG G  +D++ P
Sbjct: 229 VDRSTPVAVA--LPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTP 286

Query: 367 EPLS 370
             +S
Sbjct: 287 TVVS 290



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 106/241 (43%), Gaps = 19/241 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFVLQSG 182
           L +  +V + G +  G LG G   T   S T +  + P+      V+A  +H+  +  +G
Sbjct: 102 LTAAGTVLAWGDNSHGQLGDG---TGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAG 158

Query: 183 QVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            V   G NS    G     D + P+     V          V AG   +  LT  G V  
Sbjct: 159 TVLAWGGNSFGQLGDGTVVDRSTPV----AVALPPSTTVTAVAAGATHSVALTSAGTVLA 214

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N  GQLG G  +DR TP ++A L    +V  +AAG ++ +A+T  G V ++G   NF
Sbjct: 215 WGGNPFGQLGDGTVVDRSTPVAVA-LPPSTTVTAVAAGGNHSVALTSAGTVLAWGR--NF 271

Query: 300 C--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG G   D   P  +      G+    V+AG  H +AL ++G V  WG    G LG 
Sbjct: 272 FGQLGDGTVVDRSTPTVVS--LPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGD 329

Query: 358 G 358
           G
Sbjct: 330 G 330



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 108/256 (42%), Gaps = 13/256 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  GR H++ L S  +V + G +  G LG G    +      +  P +  V  V+A   H
Sbjct: 144 VAAGRDHSVALTSAGTVLAWGGNSFGQLGDGTVVDRSTPV-AVALPPSTTVTAVAAGATH 202

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +  +  +G V   G N     G     D + P+     V          V AG N +  L
Sbjct: 203 SVALTSAGTVLAWGGNPFGQLGDGTVVDRSTPV----AVALPPSTTVTAVAAGGNHSVAL 258

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G N  GQLG G  +DR TP  ++ L    +   +AAG  + LA+T  G V 
Sbjct: 259 TSAGTVLAWGRNFFGQLGDGTVVDRSTPTVVS-LPAGVTASAVAAGRIHSLALTTAGGVL 317

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-EHVVALDSSGYVYTWGKG 350
           ++G+ +   LG G          +         +  +SA D +H VA+ S+G   +WG+ 
Sbjct: 318 AWGNNTFGQLGDGTTTTSST--PVSVTLPAATTITAISARDSQHSVAMTSAGAALSWGRN 375

Query: 351 YCGALGHGDEIDKTLP 366
             G LG G    ++ P
Sbjct: 376 LRGQLGDGTTTTRSTP 391



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 11/227 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ L S  +V + G +  G LG G    +      +  P +  V  V+A  NH
Sbjct: 196 VAAGATHSVALTSAGTVLAWGGNPFGQLGDGTVVDRSTPV-AVALPPSTTVTAVAAGGNH 254

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  +  +G V   G N     G       + R  P +V    GV    V AG   +  LT
Sbjct: 255 SVALTSAGTVLAWGRN---FFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALT 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVY 291
             G V   G+NT GQLG G T    +      L    ++  I+A  S + +A+T  G   
Sbjct: 312 TAGGVLAWGNNTFGQLGDGTTTTS-STPVSVTLPAATTITAISARDSQHSVAMTSAGAAL 370

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+G      LG G       P  +      G+ V  ++AGD+H +AL
Sbjct: 371 SWGRNLRGQLGDGTTTTRSTP--VDVHLPTGVTVTAIAAGDDHSLAL 415


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 7/259 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ G+ H+L ++    VF+ G+   G LG G  T   V   R+      H + QV     
Sbjct: 88  VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLG-TTETAVRIPRLIKRLCDHRIAQVMCGNQ 146

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+FT G N+S   G          P+ +++L G+P  ++TAG + +  L++
Sbjct: 147 HCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSL 206

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++F
Sbjct: 207 SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRS-QKVVHISCGEEHTAALTKDGGLFTF 265

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G GS   LGHG   +EL PR +      G  V +++ G  H +A   SSG VY +G    
Sbjct: 266 GDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSH 323

Query: 353 GALGHGDEIDKTLPEPLSS 371
           G LG G       P PL +
Sbjct: 324 GQLGTGVLSADKSPYPLKT 342



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 123/268 (45%), Gaps = 20/268 (7%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFP 160
           V T  G  +I  G  H++ L+ + SV++CGS+ CG LGH      PE    +   +I   
Sbjct: 29  VFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGITPEFVGALDTQKITL- 87

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                  VS  + H+  V + GQVF  G       G   T   +  PRL++ L      Q
Sbjct: 88  -------VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQ 140

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGP 278
           V  G      L+  G + T G NT GQLG G     P+     PL+ +  +   +I AG 
Sbjct: 141 VMCGNQHCIALSKDGQLFTWGQNTSGQLGLGK--GEPSKLFPQPLKSLAGIPLAKITAGG 198

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +  A++ +G V+ +G      LG  +  D   P  I+  R +   VV +S G+EH  AL
Sbjct: 199 DHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQ--KVVHISCGEEHTAAL 256

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              G ++T+G G  G LGHG   ++ LP
Sbjct: 257 TKDGGLFTFGDGSWGQLGHGSTANELLP 284



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 8/246 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G +  G LG G E          N  +   + ++     H+ F+L  G V+TCG NS   
Sbjct: 5   GKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNS--- 61

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
           CG    N+P   P  V AL       V+ G   +  +  +G V   G+   GQLG G T 
Sbjct: 62  CGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE 121

Query: 255 DR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 312
                P+ I  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           + +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D  D+ +P  +  L
Sbjct: 181 QPLKSL--AGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFL 238

Query: 373 KSHLAV 378
           +S   V
Sbjct: 239 RSQKVV 244



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H + +S +  +F+ G +  G LG G      +    +   +   + +++A  +
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGD 199

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+  +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV--PCHIKFLRSQKVVHISCGEEHTAALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT-GNGVV 290
             G + T G  + GQLGHG T +   P+ +  LE +G+ V QI  G  + LA    +G V
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGV 315

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT-FRRKGIH--VVRVSAGDEHVVALDSS 341
           Y+FG  S+  LG G    +  P  ++T F    IH  V +++ G +H   L S+
Sbjct: 316 YAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSN 369


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3777 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3830

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3831 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3889

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3890 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3948

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3949 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4006

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4007 HCVCCTEDGEVYTWGDNDEGQLGDG 4031



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3789 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3847

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3848 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3906

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3907 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3964

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3965 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4000



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V +  +   F    G+VF+ G+      GH         PRL+EALK    + +  G 
Sbjct: 2803 VAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSR-----MPRLIEALKTKRIRDIACGS 2857

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYML 282
            + +  LT  G ++T G   +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  L
Sbjct: 2858 SHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTL 2915

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T  G+V+S G G  + +G G +      P+ I+  R  G  V ++  G +  +AL  S
Sbjct: 2916 ALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKS 2973

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G V+TWGKG    LGHG ++    P+ +  L+
Sbjct: 2974 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLR 3005



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 128  NSSVFSCGSSLCGVLGH---GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  VFS G    G LGH    P   + +   RI          ++   +H+A +  SG++
Sbjct: 2818 DGKVFSWGEGDDGKLGHFSRMPRLIEALKTKRIR--------DIACGSSHSAALTSSGEL 2869

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGHVHTCGS 242
            +T G       GH D N    +P++V+ L G    QV  G     T  LT  G V + G 
Sbjct: 2870 YTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGD 2928

Query: 243  NTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
                ++G G  +     P++I  L   G V QI  G  + LA+T +GVV+++G G  F L
Sbjct: 2929 GDLWKIGPGPEVKGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2987

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            GHG      +P+ ++  R K I V    +G  H +A+  SG VY WG    G  G+G
Sbjct: 2988 GHGSDVHVRKPQVVEGLRGKKI-VACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNG 3043



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3775 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3834

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3835 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3893

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 3894 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 3941



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 17/209 (8%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC---GHRDTNRPIFRPR-LVEALKGV 216
            SA +VVQV+        V   G+V+ CG+ + +     G      PI  P   + AL   
Sbjct: 2741 SALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPI--PHGXITALSSY 2798

Query: 217  PCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              K+V   +G + TGF  + G V + G    G+LGH   +    P+ I  L+    +  I
Sbjct: 2799 VVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALK-TKRIRDI 2853

Query: 275  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--D 332
            A G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D
Sbjct: 2854 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRD 2911

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEI 361
               +AL   G V++ G G    +G G E+
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEV 2940



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 11/201 (5%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF+ G N     G    N+ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2711 KVFSWGLNDKDQLGGL-KNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2769

Query: 243  NTHG-QLGHG---DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             T     G G    T+  P     A    V   V + +G S       +G V+S+G G +
Sbjct: 2770 ATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDD 2829

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LGH  +     PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHG
Sbjct: 2830 GKLGHFSR----MPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHG 2883

Query: 359  DEIDKTLPEPLSSLKSHLAVQ 379
            D   +  P+ +  L  H  +Q
Sbjct: 2884 DNTTQLKPKMVKVLLGHRVIQ 2904



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 6/225 (2%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2911

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD   +  G     +    P+ +E L G    Q+  G  F+  LT
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     V    +G  + LAVT +G VY+
Sbjct: 2972 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYA 3031

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3032 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3074



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3754

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3755 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3814

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3815 DGKLGHGNRSPCDRPRVIESLR 3836



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3899 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3957

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3958 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4016

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4017 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4062



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 549


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 3796 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 3854

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 3855 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 3913

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3914 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3971

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3972 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4007



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3784 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3837

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3838 VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 3896

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3897 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3955

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3956 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4013

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4014 HCVCCTEDGEVYTWGDNDEGQLGDG 4038



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G++F+
Sbjct: 2764 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 2822

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 2823 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 2881

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 2882 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2939

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 2940 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV 2997

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 2998 RKPQVVEGLRGKKIVHVAVGALHCLA 3023



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 2866

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2985 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3042

Query: 357  HG 358
            +G
Sbjct: 3043 NG 3044



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 2830

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2888

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQ 2907



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 2799

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 2954



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3782 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3841

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 3842 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 3900

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 3901 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 3948



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3032

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPI----QLIGGEQTLFAVTADGKLY 3761

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3762 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3821

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3822 DGKLGHGNRSPCDRPRVIESLR 3843



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           F  I G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G 
Sbjct: 404 FSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQ 462

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           VYS+G G N  LGHG +     P+ ++
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLE 489



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3906 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3964

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3965 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4023

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4024 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4069



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 2926 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 2985 DYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3043

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3044 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3077



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+S+G G    LG G       P+ I+    + + VV+V  G +  VAL   G VY+W
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRCGSQFSVALTKDGQVYSW 466

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           GKG    LGHG E     P+ L  L++ L
Sbjct: 467 GKGDNQRLGHGTEEHVRYPKLLEGLQATL 495



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A F L  GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  
Sbjct: 402 AVFSLIFGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 460

Query: 235 GHVHTCGSNTHGQLGHG 251
           G V++ G   + +LGHG
Sbjct: 461 GQVYSWGKGDNQRLGHG 477


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 131/253 (51%), Gaps = 17/253 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V + +   Q+  G+Y T +I     V +CG +  G LG G  + Q V   RIN      
Sbjct: 368 LVRSLSDVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVP-KRINI--NCK 424

Query: 165 VVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEA-LKGVPC 218
           + QVS+S   + H+  +  +G+V++ GD      GH D  T++    P+L++    G   
Sbjct: 425 IKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHK---EPKLIQGPFIGKVI 481

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V+AG   +  +T  G ++T G   HG+LGHGD   R  P  +  L ++  V  +A G 
Sbjct: 482 ELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDM-PVGYVACGS 540

Query: 279 SYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++ LA + +G  V+SFGSG N  LGHG      +P+ I+  R   I   +V+AG    VA
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIK--KVAAGIHFSVA 598

Query: 338 LDSSGYVYTWGKG 350
           L  +G V+TWG+G
Sbjct: 599 LTCTGEVFTWGQG 611



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+   ++N A       +VF  G NSS       T      PRLV +L  V  +QV AG
Sbjct: 325 VVRTPLNQNSAELPQPLSEVFMWGSNSSNQHAEGATEVTDI-PRLVRSLSDV--QQVEAG 381

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  +  +G V  CG N++G+LG G++ ++P PK I    ++  V        + LA+
Sbjct: 382 QYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLAL 441

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G VYS+G G    LGHG+     +P+ IQ  F  K I +  VSAG  H  A+ S G 
Sbjct: 442 SDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIEL--VSAGYRHSAAVTSDGQ 499

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +YTWG+G  G LGHGD   + +P  + SL
Sbjct: 500 LYTWGEGDHGRLGHGDCNPRFIPTLVKSL 528



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 122/243 (50%), Gaps = 13/243 (5%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           H+L +S++  V+S G    G LGHG   T       I  P    V++ VSA   H+A V 
Sbjct: 437 HSLALSDTGEVYSWGDGDYGKLGHGDVATHKEP-KLIQGPFIGKVIELVSAGYRHSAAVT 495

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
             GQ++T G+      GH D N P F P LV++L  +P   V  G   T   +  G+ V 
Sbjct: 496 SDGQLYTWGEGDHGRLGHGDCN-PRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVW 554

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + GS  +G+LGHG+T+    P+ I  L     + ++AAG  + +A+T  G V+++G GSN
Sbjct: 555 SFGSGDNGKLGHGNTIRLYKPQKIEGLRHY-KIKKVAAGIHFSVALTCTGEVFTWGQGSN 613

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW---GKGYCGAL 355
              G  E      P  ++   ++ I  + +S GD H +AL  +  VY W   GKG CG  
Sbjct: 614 LGCGSSEI-TLFSPAVVEDLMQQMI--IDISVGDSHCLALTRNCAVYAWGSNGKGQCGQ- 669

Query: 356 GHG 358
           GH 
Sbjct: 670 GHS 672



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 123/296 (41%), Gaps = 57/296 (19%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS---ENHAAFVLQ 180
            +L S  +V SCG    G LGHG  +    + T I+      + QVS S   + H+  + +
Sbjct: 3440 VLTSQGTVLSCGEGNYGRLGHG-HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTE 3498

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            +G+VF+ GD      GH +  R   +P+L+E+L  V   QV  G   +  L+  G V+  
Sbjct: 3499 TGEVFSWGDGDFGKLGHGNNERQ-RKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVF 3557

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            GS  HG+LG G  +++  P  I   +   ++  IA G ++ + + G  VV++FG G    
Sbjct: 3558 GSAEHGKLGLGGHINKKRPTKIVH-KGFLNIKYIACGQNHTICI-GENVVWAFGEGEGGK 3615

Query: 301  LGHGEQHDELQPRAIQTFRRKGIH------------------------------------ 324
            LG G + D   P+ I T   K I                                     
Sbjct: 3616 LGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATDVLYTE 3675

Query: 325  --------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                          V  V+ G +HV+ L + G+V+ WG    G LG G ++    P
Sbjct: 3676 KLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQKP 3731



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 6/165 (3%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I+ P  ++  K    +++  G N T  LT +G V +CG   +G+LGHG +   P    I+
Sbjct: 3416 IWSPIKIQNFK--IAQRIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMIS 3473

Query: 264  PLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
             L+   +  V        + LA+T  G V+S+G G    LGHG    + +P+ I++    
Sbjct: 3474 ALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLY-- 3531

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             + V++V+ G +H   L   G VY +G    G LG G  I+K  P
Sbjct: 3532 DVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRP 3576



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 98/260 (37%), Gaps = 55/260 (21%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H+L ++ +  VFS G    G LGHG    Q      I       V+QV+    H+A + Q
Sbjct: 3492 HSLALTETGEVFSWGDGDFGKLGHGNNERQRKP-KLIESLYDVVVIQVACGHKHSAVLSQ 3550

Query: 181  SGQVFT-----------------------------------CGDNSSFCCGHR------- 198
             G+V+                                    CG N + C G         
Sbjct: 3551 DGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGENVVWAFGE 3610

Query: 199  --------DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                     + + I+ P+ +  L G   K+   G  FT FL+  G +++CGS+       
Sbjct: 3611 GEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATD 3670

Query: 251  GDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
                ++  P+ I   E  G +V  +A GP ++L +T  G V+++G+     LG G     
Sbjct: 3671 VLYTEKLIPEKI--FEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPV 3728

Query: 310  LQPRAIQTFRRKGIHVVRVS 329
             +P  IQ    K I  +  S
Sbjct: 3729 QKPMIIQILSDKNIKQIATS 3748



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 238  HTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            +  G+  +GQLG    G  ++  +P  I   +      +I  G +    +T  G V S G
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSPIKI---QNFKIAQRIVCGQNCTFVLTSQGTVLSCG 3451

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG---DEHVVALDSSGYVYTWGKGY 351
             G+   LGHG  H +  P        +G  + +VS     D H +AL  +G V++WG G 
Sbjct: 3452 EGNYGRLGHG--HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGD 3509

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G LGHG+   +  P+ + SL   + +Q
Sbjct: 3510 FGKLGHGNNERQRKPKLIESLYDVVVIQ 3537



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 7/173 (4%)

Query: 116 ITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HTL  S   ++V+S GS   G LGHG  T +     +I       + +V+A  +
Sbjct: 536 VACGSTHTLACSRDGNTVWSFGSGDNGKLGHG-NTIRLYKPQKIEGLRHYKIKKVAAGIH 594

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  +  +G+VFT G  S+  CG  +    +F P +VE L       ++ G +    LT 
Sbjct: 595 FSVALTCTGEVFTWGQGSNLGCGSSEIT--LFSPAVVEDLMQQMIIDISVGDSHCLALTR 652

Query: 234 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              V+  GSN  GQ G G  T     P  +  LE    + QI+AG S+ +A T
Sbjct: 653 NCAVYAWGSNGKGQCGQGHSTSPVSRPSKVINLEG-KQINQISAGTSHSVAWT 704


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 14/266 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S    V+S G +  G LGHG   + C   
Sbjct: 4035 LLESIQH------VFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHG-NRSPCDRP 4087

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+
Sbjct: 4088 RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQ 4146

Query: 215  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VV 4205

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G 
Sbjct: 4206 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGS 4263

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHG 358
             H V     G VYTWG    G LG G
Sbjct: 4264 LHCVCCTEDGEVYTWGDNDEGQLGDG 4289



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 134/272 (49%), Gaps = 26/272 (9%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G MQ+       L++S N  V++   +   +   GP+  Q ++        + ++V+++A
Sbjct: 453 GVMQVACAEKRFLILSRNGRVYTQAYNSDTL---GPQLVQSLA--------SRNIVKIAA 501

Query: 171 -SENHAAFVLQS-GQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VT 222
            S+ H    L + G+VF+  CGD      GH DT  P+  P+++ AL G    +    + 
Sbjct: 502 HSDGHHYLALSANGEVFSWGCGDGGRL--GHGDT-VPLEEPKMISALSGKQAGKHVVHIA 558

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 281
            G  ++  +T  G ++T G   +G+LGHG + D+  P  +  L+ +  + V   +G +  
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQT 618

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT NG V+S+G G    LG G       P+ I+    + + +V+V  G +  +AL   
Sbjct: 619 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDIVKVRCGSQFSIALTKD 676

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G VYTWGKG    LGHG E     P+ L  LK
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLK 708



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+    +S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  +V+
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 753



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G+VF+
Sbjct: 3016 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV 3249

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3250 RKPQVVEGLRGKKIVHVAVGALHCLA 3275



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4258



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 6/222 (2%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            P+   +V+  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   
Sbjct: 2942 PNTGSLVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVV 2999

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAG 277
            QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G
Sbjct: 3000 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAA 3117

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            + SSG +YTWG G  G LGHGD   +  P+ +  L  H  +Q
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 3159



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3206



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 21/303 (6%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
            M+ N  ++ L+ C+  +KR    + +Q +    D    SAG               + ++
Sbjct: 3914 MADNENMDSLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG--------------SGTI 3959

Query: 132  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            +  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  +
Sbjct: 3960 YGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+LG
Sbjct: 4019 GGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLG 4077

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            HG+      P+ I  L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+
Sbjct: 4078 HGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQ 4136

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196

Query: 370  SSL 372
             SL
Sbjct: 4197 DSL 4199



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLR 4094



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3178 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3237 DYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3295

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3296 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQA 550


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 115/244 (47%), Gaps = 9/244 (3%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F    +V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + R   +P  V AL       V+ G   T  L  +G V + G   +GQ+G    
Sbjct: 65  QLGHDKSRR---KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTA 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++ +  ++S+G      LG G E   E  
Sbjct: 122 EEYIRVPRNIKSLSDV-QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           PR I++    GI    ++AG  H  AL  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PRHIKSL--SGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKS 238

Query: 372 LKSH 375
           L+S 
Sbjct: 239 LRSQ 242



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 240 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STNHEVNPRKVFELMGSIVTQ 298



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 21/260 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG  DE +++ P  L +L++
Sbjct: 230 LGLNDETNRSYPTQLKTLRT 249



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 150

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 225
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 151 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 266

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324

Query: 345 YTWGKGYCGALGHGDEIDKTLPE 367
           Y +G G  G LG        LP+
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGHG   ++ LP  +  L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMEL 299



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 15/263 (5%)

Query: 121 YHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH+L L S+ +V++ G +  G LG   +T+     +    P  A   +++A   H+  + 
Sbjct: 460 YHSLALRSDGTVWAWGDNAYGQLG---DTSGGRRPSPAQVPGVAGATEIAAGTYHSLALR 516

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+T GDNS    G   T R    P +V  L  +    V AGL  +  L   G V  
Sbjct: 517 SDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLAVI--THVAAGLFHSLALDSSGQVWA 574

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG G T  R  P  ++ L     +  I AGPSY +A+  +G V+++G  SN 
Sbjct: 575 WGDNVYGQLGDGSTTSRNVPGRVSGLPA--GIQAIVAGPSYSVALGADGSVWTWGENSNG 632

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G       P  +         +V +S    H VALD++G ++ WG+   G LG+G 
Sbjct: 633 QLGDGTTTARPVPARVSLP----ATLVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGT 688

Query: 360 EIDKTLPEPLSSLKSHLAVQGLS 382
            + ++ P  + S      VQG +
Sbjct: 689 LVSESTPRRVPSFAR---VQGFA 708



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 15/255 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++ +V++ G +  G LG+G  +   V    + +P     V +++   H   V   G V
Sbjct: 717 LRADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYP---RTVPLASGAQHVLAVSSDGSV 773

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSN 243
           F+ G NS    G+  +      PR    L G  C + V AG  F+  L+  G V   G N
Sbjct: 774 FSFGSNSRGQLGYEGSATQT-SPRW---LTGPECIEAVAAGALFSLALSCDGGVWAWGDN 829

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G    R  P  +  L  V   V IAAG  + LAV  +G V+++G+  +  LG 
Sbjct: 830 GSGQLGDGAVTARTAPARVPGLAHV---VAIAAGSDHALAVRADGTVWAWGANGSGQLGD 886

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       P  ++      + VV V+ G  H +A+ + G V+ WG    G LG G    +
Sbjct: 887 GTTTSRAVPMQVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSR 942

Query: 364 TLPEPLSSLKSHLAV 378
           TLP  +S+L    A+
Sbjct: 943 TLPVFVSTLSGVQAI 957



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 126/274 (45%), Gaps = 31/274 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE-----TTQCVSFTRINFPSAAHVVQV 168
           ++  G  H+L ++ + +V++ G++  G LG G        TQ V  T         V  V
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLT--------GVTAV 103

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   H+  + + G V+T G N+    G   + R +  P  V  L GV    + AG N  
Sbjct: 104 AAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSV--PAQVAGLTGVTA--IAAG-NLH 158

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
               I G V   G+NT GQLG G +  R TP  +A L EV   V IAAG  + LA+  +G
Sbjct: 159 SLALINGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEV---VAIAAGDFHSLALKRDG 215

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSS---GYV 344
            V+++G   +  LG G       P      R  G+  +V ++ G  H VA  S+   G V
Sbjct: 216 TVWAWGGNYSGQLGDGTLDSRSTP-----VRVSGLTGIVALAGGGSHSVAASSTTLGGKV 270

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + WG    G LG+G ++   LP  +  L   +A+
Sbjct: 271 WAWGDNTYGQLGNGGDVSSLLPLEVPGLTQVVAL 304



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLG-----HGPETTQCVSFTRINFPSAAH 164
           AG  +I  G YH+L L S+ +V++ G +  G LG      GP     V       P  A 
Sbjct: 500 AGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVV-------PGLAV 552

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVT 222
           +  V+A   H+  +  SGQV+  GDN     G   T       R+     G+P   + + 
Sbjct: 553 ITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRV----SGLPAGIQAIV 608

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
           AG +++  L   G V T G N++GQLG G T  RP P  ++ P     ++V ++   S+ 
Sbjct: 609 AGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPA----TLVALSTRGSHT 664

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+   G+++++G   +  LG+G    E  PR + +F R    V   ++G     AL + 
Sbjct: 665 VALDTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSFAR----VQGFASGLRTTFALRAD 720

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLP 366
           G V+ WG    G LG+G      +P
Sbjct: 721 GTVWAWGDNSLGQLGNGATSASPVP 745



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 12/214 (5%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++A  NH+ +V  +G V+  G N+    G   T +    P  V  L GV    V AG  
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQH-STPTQVVGLTGVTA--VAAGNT 108

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V T G+NT GQLG G +  R  P  +A L     V  IAAG  + LA+  
Sbjct: 109 HSMALREEGTVWTWGTNTDGQLGDGVS-QRSVPAQVAGLT---GVTAIAAGNLHSLALI- 163

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           NG V+++G+ +   LG G       P  +         VV ++AGD H +AL   G V+ 
Sbjct: 164 NGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGL----TEVVAIAAGDFHSLALKRDGTVWA 219

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           WG  Y G LG G    ++ P  +S L   +A+ G
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAG 253



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 25/271 (9%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H L +S + SVFS GS+  G LG+    TQ    T   + +    ++  A+   
Sbjct: 757  LASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQ----TSPRWLTGPECIEAVAAGAL 812

Query: 175  AAFVLQ-SGQVFTCGDNSSFCCGHRD-TNR--PIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  L   G V+  GDN S   G    T R  P   P L   +       + AG +    
Sbjct: 813  FSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVA------IAAGSDHALA 866

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +   G V   G+N  GQLG G T  R  P  +   +E+  VV +A G  + LAV  +G V
Sbjct: 867  VRADGTVWAWGANGSGQLGDGTTTSRAVPMQV---KELVDVVAVAGGSGHSLAVRADGTV 923

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +++G+  +  LG G       P  + T    G+  +  ++G +H +AL   G V+ WG  
Sbjct: 924  WAWGANGSGQLGDGTTTSRTLPVFVSTL--SGVQAI--ASGAQHSLALAEGGVVWAWGAN 979

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
              G LG G    +T P  +S L     VQGL
Sbjct: 980  GSGQLGDGTTTSRTRPVQVSGLS---GVQGL 1007



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 129/310 (41%), Gaps = 59/310 (19%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L ++ SV++ G +  G LG G  T + V   R++ P  A +V +S   +H   +  
Sbjct: 613 YSVALGADGSVWTWGENSNGQLGDGTTTARPVP-ARVSLP--ATLVALSTRGSHTVALDT 669

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G ++  G N S   G+  T      PR V +   V  +   +GL  T  L   G V   
Sbjct: 670 TGMLWAWGRNVSGQLGN-GTLVSESTPRRVPSFARV--QGFASGLRTTFALRADGTVWAW 726

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           G N+ GQLG+G T   P P     ++ VG    V +A+G  ++LAV+ +G V+SFGS S 
Sbjct: 727 GDNSLGQLGNGATSASPVP-----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSR 781

Query: 299 FCLGHGEQHDELQPR-------------------------AIQTFRRKG----------- 322
             LG+     +  PR                          +  +   G           
Sbjct: 782 GQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841

Query: 323 ----------IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                      HVV ++AG +H +A+ + G V+ WG    G LG G    + +P  +  L
Sbjct: 842 RTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKEL 901

Query: 373 KSHLAVQGLS 382
              +AV G S
Sbjct: 902 VDVVAVAGGS 911



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 119/265 (44%), Gaps = 17/265 (6%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G   +L +S +  V++ G +  G LG G  T +         P  AHVV ++A  +H
Sbjct: 807  VAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAP---ARVPGLAHVVAIAAGSDH 863

Query: 175  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            A  V   G V+  G N S   G    T+R +  P  V+ L  V    V  G   +  +  
Sbjct: 864  ALAVRADGTVWAWGANGSGQLGDGTTTSRAV--PMQVKEL--VDVVAVAGGSGHSLAVRA 919

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V   G+N  GQLG G T  R  P  ++ L     V  IA+G  + LA+   GVV+++
Sbjct: 920  DGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLS---GVQAIASGAQHSLALAEGGVVWAW 976

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G+  +  LG G      +P  +Q     G+    + AG    +AL + G V++WG    G
Sbjct: 977  GANGSGQLGDGTTTSRTRP--VQVSGLSGVQ--GLVAGASFSLAL-TPGKVWSWGNNSAG 1031

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAV 378
             LG G    ++ P    +L S +A+
Sbjct: 1032 QLGDGTLNSRSQPGAGPTLSSFVAL 1056



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 106/236 (44%), Gaps = 15/236 (6%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G  H L + ++ +V++ G++  G LG G  T++ V    +       VV V+   
Sbjct: 855  VAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVP---MQVKELVDVVAVAGGS 911

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             H+  V   G V+  G N S   G   T      P  V  L GV  + + +G   +  L 
Sbjct: 912  GHSLAVRADGTVWAWGANGSGQLGDGTTTSRTL-PVFVSTLSGV--QAIASGAQHSLALA 968

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V   G+N  GQLG G T  R  P  ++ L  V  +V   AG S+ LA+T  G V+S
Sbjct: 969  EGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGLV---AGASFSLALT-PGKVWS 1024

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            +G+ S   LG G  +   QP A  T        V +SAG +H V L S     +WG
Sbjct: 1025 WGNNSAGQLGDGTLNSRSQPGAGPTLS----SFVALSAGAQHTVVLRSDDSFLSWG 1076



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
              G++  G LG+G  + + +       PS      ++A ++H       G V+  GDN+
Sbjct: 371 LGWGANGSGQLGNGSSSVRALPG---RVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNT 427

Query: 192 SFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
               G       + RP   RL   L  V  + ++A    +  L   G V   G N +GQL
Sbjct: 428 ---YGQLGDGTLVSRPAPVRLSSTLTSV--RALSASSYHSLALRSDGTVWAWGDNAYGQL 482

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G      RP+P   A +  V    +IAAG  + LA+  +G V+++G  S   LG G    
Sbjct: 483 GDTSGGRRPSP---AQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGAT-- 537

Query: 309 ELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
              PRA       G+ V+  V+AG  H +ALDSSG V+ WG    G LG G    + +P 
Sbjct: 538 PRGPRAPAVV--PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPG 595

Query: 368 PLSSLKSHL 376
            +S L + +
Sbjct: 596 RVSGLPAGI 604



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 119/313 (38%), Gaps = 66/313 (21%)

Query: 112 GNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           G   I  G  H+L + N +V++ G++  G LG G  T++    T         VV ++A 
Sbjct: 148 GVTAIAAGNLHSLALINGAVWAWGNNTTGQLGDGSSTSRS---TPAKVAGLTEVVAIAAG 204

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           + H+  + + G V+  G N S   G      R T   +     + AL G     V A   
Sbjct: 205 DFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASST 264

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAV 284
                T+ G V   G NT+GQLG+G  +      S+ PLE  G   VV +A+G S+ LA+
Sbjct: 265 -----TLGGKVWAWGDNTYGQLGNGGDV-----SSLLPLEVPGLTQVVALASGTSHSLAL 314

Query: 285 TGNGVVYSFGS----------------------------------------GSNFCLGHG 304
            G+  V+++G                                         G N  LG G
Sbjct: 315 RGDDSVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWG 374

Query: 305 EQHDELQPRAIQTFRRKGIHV------VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
                       + R     V        ++AGD HV    + G V+ WG    G LG G
Sbjct: 375 ANGSGQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDG 434

Query: 359 DEIDKTLPEPLSS 371
             + +  P  LSS
Sbjct: 435 TLVSRPAPVRLSS 447


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 21/260 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG  DE +++ P  L +L++
Sbjct: 230 LGLNDETNRSYPTQLKTLRT 249



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 150

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 225
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 151 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 266

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324

Query: 345 YTWGKGYCGALGHGDEIDKTLPE 367
           Y +G G  G LG        LP+
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGHG   ++ LP  +  L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMEL 299



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 17/269 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  GR HTL+++    VFS G      LG G    Q +     +     +++++     
Sbjct: 155 QVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWG 214

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G +FT G       GH  +  PI  P++++       K +  G +F   +T 
Sbjct: 215 HSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT--NYKFKNIFTGSDFNLAITN 272

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPK---SIAPL--------EEVGSVVQIAAGPSYML 282
            G V + GS   GQLGHGDT +   PK   SI PL          +     +A G S+ L
Sbjct: 273 DGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHAL 332

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +  +G + + G   N  LG G + D  L P  ++ F   G  VV+VSAG  H   +  S
Sbjct: 333 IIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLE-FDFDGEKVVKVSAGRNHSACITES 391

Query: 342 GYVYTWGKGYCGALGHGDEI-DKTLPEPL 369
           G +Y WG G  G LG+G  + D+  P  L
Sbjct: 392 GKLYIWGNGNKGKLGNGKSVGDQLTPLEL 420



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 24/266 (9%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSF----TRIN----------FPSAAHVVQVSASE 172
           +N  ++SCG  + G LG   E  +  SF    T+ +          +        +    
Sbjct: 45  TNKYLYSCGCGIDGKLGIDNELVKFESFPTKLTKFDNGENNGASQRYQDNLECKDIVCGH 104

Query: 173 NHAAFV-LQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +  Q+++CG  S       +++TN     P LV  LK    KQV  G   T 
Sbjct: 105 YHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGRRHTL 164

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT    V + G  +  QLG G T ++P P  I  L ++G+++++  G  + L +T +G 
Sbjct: 165 VLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGD 224

Query: 290 VYSFGSGSNFCLGHGEQHDELQ-PRAIQT-FRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           ++++G   +   GHG   + +  P+ I+T ++ K I       G +  +A+ + G V +W
Sbjct: 225 IFTWGFTQDSQTGHGFSEEPIHIPKMIKTNYKFKNIF-----TGSDFNLAITNDGRVCSW 279

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLK 373
           G G  G LGHGD  +   P+ + S++
Sbjct: 280 GSGEFGQLGHGDTKNVEAPKLIQSIQ 305


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 103/206 (50%), Gaps = 4/206 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGHG  +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPL 369
           +Y +G G  G LG G   +   P P+
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPV 223



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G      T P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           V +S G+EH   L  SG V+T+G G CG LGHG   D+  P 
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPR 168



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 4/121 (3%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQT 317
           P+ I  L +  +++Q++ G  + LA+  +G  +++G  S+  LG G++   +  P+ +++
Sbjct: 10  PRLIQKLNQ-QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRS 68

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +GI + +V+AG  H  AL  SG V+ WG    G LG  DE D+  P  +  L++   
Sbjct: 69  L--EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126

Query: 378 V 378
           V
Sbjct: 127 V 127



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +       VV +S  E 
Sbjct: 76  QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR-ESPCHVKLLRTQKVVYISCGEE 134

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G   T  F+ 
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVP 193

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G    GQLG G T +   P  +
Sbjct: 194 SSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 24/237 (10%)

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           S   I  P +  V QV+ +EN    V  SGQ+++     S C            P+LVE 
Sbjct: 524 STATIELPPSLQVRQVACTENSIYIVTTSGQLYSI---HSSCA-------ETVAPKLVEG 573

Query: 213 LKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           L+GV   Q+ A         L+  G V++ G+   G+LGHGDT  +  P  IA LE+   
Sbjct: 574 LEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA-LEK--Q 630

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I AG SY  AV+  G ++++G G+   LGHG   D+  P  +Q  +   +  V + +
Sbjct: 631 VTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGS 690

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
           GD H +A+   G ++ WG G  G LG+G      LP         + ++G+S +A +
Sbjct: 691 GDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLP---------VQIEGVSSVARI 738



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 117/257 (45%), Gaps = 21/257 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3003 GKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIR--------DIACG 3054

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+LV AL+G    QV  G     T 
Sbjct: 3055 SSHSAAITSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTALQGHRVVQVACGSRDAQTL 3113

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P  +  L  VG VVQI  G  + LA+T  G 
Sbjct: 3114 CLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVG-VVQIECGAQFSLALTKIGE 3172

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG V+ WG 
Sbjct: 3173 VWTWGKGDYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQVFAWGD 3230

Query: 350  GYCGALGHGDEIDKTLP 366
               G  G G+ +    P
Sbjct: 3231 NDHGQQGSGNTVVNKKP 3247



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 32/290 (11%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I+ G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2943 IHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2993

Query: 166  ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 221
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRVTLEKPKLLESLRTKRIRDI 3051

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 279
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3052 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQG-HRVVQVACGSRDA 3110

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              L +T  G+V+S+G G    LG G       P  ++  R  G+ VV++  G +  +AL 
Sbjct: 3111 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNGVGVVQIECGAQFSLALT 3168

Query: 340  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
              G V+TWGKG    LGHG +     P P+  L+     H+AV  L  LA
Sbjct: 3169 KIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3218



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 43/256 (16%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4034 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVVDIACG 4091

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-------------------SIAPL 265
               +  +T +GHV T G   +G+LGHGD+ D+  PK                   S+A  
Sbjct: 4092 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEE 4151

Query: 266  EEVGS-------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
              +G+             V+++  G  + +A+T +G VY++G G    LGHG      +P
Sbjct: 4152 VPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRP 4211

Query: 313  RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            + +     +G  ++ ++ G  H VA   SG V+TWG    G LG G       P  + SL
Sbjct: 4212 KKVAAL--QGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSL 4269

Query: 373  KSHLAVQGLSVLAEVC 388
                  QG  ++  +C
Sbjct: 4270 ------QGKHIVKVIC 4279



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 11/233 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L S   V+S G+   G LGHG   ++ V  T+I       V  + A  +++A V
Sbjct: 588 GRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVP-TKIAL--EKQVTAIYAGASYSAAV 644

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
              G++FT G  +    GH +++   F P  V+ALK      V   +G   +  +T  G 
Sbjct: 645 SSVGELFTWGRGTYGRLGHGNSDDK-FVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGL 703

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +   G    G+LG+G     P P  I   E V SV +I +G  + +A++ +G +YS+G G
Sbjct: 704 LFAWGDGDFGKLGNGSCNGSPLPVQI---EGVSSVARIYSGSQFSVALSYDGTLYSWGKG 760

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               LGHG       P+ +     +G  +V V+ G  H +AL SSG +Y WG+
Sbjct: 761 HGGRLGHGNSEHSNVPKLVHAL--EGKKIVDVAVGSAHCLALTSSGELYGWGR 811



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 4/185 (2%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 3946 IFGWGHNHRGQLGGLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            HG +    +P+ I+     GI VV ++ G  H   + S G+V TWGKG  G LGHGD  D
Sbjct: 4065 HGNRDSYDRPKLIEAL--SGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4122

Query: 363  KTLPE 367
            +  P+
Sbjct: 4123 QLQPK 4127



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 16/178 (8%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P +    +E    +  +QV    N    +T  G +++          H    +   PK +
Sbjct: 521 PRYSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLV 571

Query: 263 APLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
             LE V SV+QIAA     + +A++  G VYS+G+G    LGHG+   +  P  I   ++
Sbjct: 572 EGLEGV-SVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQ 630

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               V  + AG  +  A+ S G ++TWG+G  G LGHG+  DK +P  + +LK++  V
Sbjct: 631 ----VTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVV 684



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 5/144 (3%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            I   V   G N   QLG   G  +  PT  S+  L ++  +  I+ G   +  V+ +G +
Sbjct: 2905 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HISGGSKSLFIVSQDGKL 2961

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2962 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3021

Query: 351  YCGALGHGDEIDKTLPEPLSSLKS 374
              G LGHG+ +    P+ L SL++
Sbjct: 3022 EDGKLGHGNRVTLEKPKLLESLRT 3045



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 110/273 (40%), Gaps = 22/273 (8%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    +       VVQV+     
Sbjct: 3051 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ-LKPKLVTALQGHRVVQVACGSRD 3109

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +   + G VF+ GD      G R  +     P  VE L GV   Q+  G  F+  LT
Sbjct: 3110 AQTLCLTEEGLVFSWGDGDFGKLG-RGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALT 3168

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P  I  L     V+ +A G  + LAVT +G V++
Sbjct: 3169 KIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRG-KKVIHVAVGALHCLAVTDSGQVFA 3227

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G   +   G G      +P  +      G+ V RV+ G  H VA         W     
Sbjct: 3228 WGDNDHGQQGSGNTVVNKKPNLVLGL--DGVFVNRVACGSSHSVA---------WSLPQ- 3275

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
                +  E DK  P P +  K  L    L + A
Sbjct: 3276 ----NPSEKDKKEPVPFAVSKDPLGSHSLGIYA 3304



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 7/135 (5%)

Query: 241  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 3950 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4005

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 4006 GGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4065

Query: 358  GDEIDKTLPEPLSSL 372
            G+      P+ + +L
Sbjct: 4066 GNRDSYDRPKLIEAL 4080



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            ++   L  + SV++ G      LGHG  T       ++       ++ ++    H     
Sbjct: 4178 QFSVALTRSGSVYTWGKGDYHRLGHG-NTDHVRRPKKVAALQGKKIISIATGSLHCVACS 4236

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             SG+VFT GDN     G   T   I RPRLV++L+G    +V  G
Sbjct: 4237 DSGEVFTWGDNDEGQLGD-GTVTAIQRPRLVQSLQGKHIVKVICG 4280


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4043 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4096

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G+++T G       GH D+   + +P+LVEAL+G
Sbjct: 4097 VIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4155

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  VG V +
Sbjct: 4156 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VTK 4214

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4215 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4272

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4273 HCVCCTEDGEVYTWGDNDEGQLGDG 4297



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 24/308 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +  +L +L  +Q+      +  +SRN +  L  +   N     + +Q +  S +IV+ 
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGK--LYTQAYNNNTLGPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA------- 162
           +A       G+++  L + S +FS G    G LGHG      VS       SA       
Sbjct: 499 AAH----PDGQHYLALSATSELFSWGCGDGGRLGHG----DTVSLEEPKLVSALSGKQTG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             V+ ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V+
Sbjct: 551 KQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVS 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L++   G V + G   +G+LG G +    TPK I  L+++  +V++  G  +
Sbjct: 610 CGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ +     +G  VV V+ G  H +AL  
Sbjct: 669 SIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGL--QGKKVVDVAVGSTHCLALTE 726

Query: 341 SGYVYTWG 348
           SG VY+WG
Sbjct: 727 SGEVYSWG 734



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     + AG 
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDIAAGG 4113

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4114 AHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4172

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4173 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVTKVECGSQFSVALTKSGA 4230

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4231 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4266



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             +AL   G V++WG G  G LG G      +P+ +  L      Q
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQ 3213



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 14/227 (6%)

Query: 161 SAAHVVQVSASEN--HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A  +  H   +  + ++F+  CGD      GH DT   +  P+LV AL G 
Sbjct: 491 ASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRL--GHGDTVS-LEEPKLVSALSGK 547

Query: 217 PC-KQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV- 271
              KQV     G  ++  +T  G ++T G   +G+LGHG + D+  P  +  L+ +  V 
Sbjct: 548 QTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVD 607

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V   +G +  L+VT NG V+S+G G    LG G       P+ I+    + + +V+V  G
Sbjct: 608 VSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDIVKVRCG 665

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            +  +A+   G VY+WGKG    LGHG E     P+ ++ L+    V
Sbjct: 666 SQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVV 712



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQ 3159



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 12/229 (5%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQS 181
            + +   V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   
Sbjct: 3011 VTAEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVD 3069

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G
Sbjct: 3070 GKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSN 298
               +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G  
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
              LG G       P+ I+  R  G  V ++  G +  +AL  SG V+TW
Sbjct: 3187 GKLGRGGSEGCNIPQNIE--RLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V QV+ +E     + ++G+++T   N++              P+LV+ L      ++ A 
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNN-----------TLGPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +     + + G    G+LGHGDT+    PK ++ L  ++ G  V+ IA G +
Sbjct: 502 PDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG+ VV VS  +GD   ++
Sbjct: 562 YSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGL--KGLKVVDVSCGSGDAQTLS 619

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG 640



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4100

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4101 LRGT-EVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4159

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4160 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4207



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 3/173 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3989 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4048

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G  V
Sbjct: 4049 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GTEV 4106

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V ++AG  H   + ++G +YTWGKG  G LGHGD  D+  P+ + +L+ +  +
Sbjct: 4107 VDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4159



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4020

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4021 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLR 4102



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V + G    G+LG G +     P++I  L    +V QI  G  + LA+T +GVV+++
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNG-QAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVTKVECGSQFSV 4223

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4224 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4282

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4283 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4328


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M    G ++  L    +V++ G    G LGHG    + +    +  P    +V VSA  
Sbjct: 138 QMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP-RLLEGPWKDRIVHVSAGG 196

Query: 173 NHAAFVLQSGQVFTCG-DNSSFCCGHRDTN----RPIFRPRLVEALKGVPCKQVTAGLNF 227
           +H+A V +SG+++T G D      GH + +      + RP  V+AL  VP   V  G  F
Sbjct: 197 SHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIASVYCGGFF 255

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G + + G N + +LGHG   +   PK +A LE+V ++VQ+A G  +  A+T +
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDV-TLVQVACGGFHAAALTQD 314

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V ++G G N  LGHG   +  +P  ++    K      ++ G     A+  +G +YTW
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADK--TCTYIACGPAWTAAITENGDLYTW 372

Query: 348 GKGYCGALG----HGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           GK     LG      +++D  L +   +L     V+ L V
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGV 412



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 18/255 (7%)

Query: 112 GNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           GN+ +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA 
Sbjct: 87  GNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAG 143

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G V+T G  +    GH    R +  PRL+E         V+AG + +  +
Sbjct: 144 GLHNIALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHSAAV 202

Query: 232 TIRGHVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T  G ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIASVYCGGFFTMA 258

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G 
Sbjct: 259 LTKSGQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGK 316

Query: 344 VYTWGKGYCGALGHG 358
           V TWG G  G LGHG
Sbjct: 317 VITWGYGGNGQLGHG 331



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 7/140 (5%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTE 204

Query: 341 SGYVYTWGKGYC-GALGHGD 359
           SG +YTWG+    G LGHG+
Sbjct: 205 SGELYTWGRDEGEGRLGHGN 224



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 59/151 (39%), Gaps = 20/151 (13%)

Query: 236 HVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV---- 289
            V   G  THGQ+GHG  DT   P   S   L     +  I         +   GV    
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 290 ----------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                     V+ +G G    LG   + ++ +P      +R    V   SAG  H +AL 
Sbjct: 96  FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR----VQMASAGGLHNIALT 151

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
             G VYTWG G  GALGHG    + LP  L 
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLE 182


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4027 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4084

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4085 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4144

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4145 ITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGS 4202

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG+      P+ +++L+
Sbjct: 4203 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQ 4232



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 114/250 (45%), Gaps = 7/250 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L  +  VFS G    G LGHG   T       I       V  ++   +H+A +
Sbjct: 2988 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLT-LEKPKLIESLRTKRVRDIACGSSHSAAI 3046

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P+LV  L+G    QV  G     T  LT  G 
Sbjct: 3047 TSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGL 3105

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P  +  L  VG V+QI  G  + LA+T +G V+++G G
Sbjct: 3106 VFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVG-VMQIECGAQFSLALTKSGEVWTWGKG 3164

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG VY WG    G  G
Sbjct: 3165 DYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3222

Query: 357  HGDEIDKTLP 366
             G+ +    P
Sbjct: 3223 SGNTVVNKKP 3232



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 114/257 (44%), Gaps = 20/257 (7%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE-TTQCV------SFTRINFPSAA 163
           AGN      +  +  I      SC   + G +      TTQ +      S   I  PS  
Sbjct: 464 AGNYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTL 523

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V QV+ +EN+   +   GQVF+   NSS              P+  E L+GV   Q+ A
Sbjct: 524 QVRQVACTENNIYILTTGGQVFSLHSNSSENIA----------PKAFEGLEGVHVVQIAA 573

Query: 224 GL--NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                    L+    V + G+   G+LGHGDT+ +  P  I  L E   V  I  G SY 
Sbjct: 574 HCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHE-KQVCGIYCGASYS 632

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T  G ++++G G+   LGHG   D+L P  +Q  +   +  V + +GD H + +  +
Sbjct: 633 AAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDN 692

Query: 342 GYVYTWGKGYCGALGHG 358
           G ++ WG G  G LG+G
Sbjct: 693 GLLFAWGDGDFGKLGNG 709



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 32/290 (11%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I  G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2928 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2978

Query: 166  ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 221
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIESLRTKRVRDI 3036

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 279
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3037 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQG-HRVVQVACGSRDA 3095

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              L +T  G+V+S+G G    LG G       P  ++  R   + V+++  G +  +AL 
Sbjct: 3096 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNSVGVMQIECGAQFSLALT 3153

Query: 340  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
             SG V+TWGKG    LGHG +     P P+  L+     H+AV  L  LA
Sbjct: 3154 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3203



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 8/213 (3%)

Query: 164 HVVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           HVVQ++A     H   +  + +V++ G       GH DT      P ++  L       +
Sbjct: 567 HVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSK-EHPTMIVGLHEKQVCGI 625

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSY 280
             G +++  +TI G + T G  T+G+LGHG++ D+  P  +  L+    V V + +G ++
Sbjct: 626 YCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAH 685

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + VT NG+++++G G    LG+G  +    P  I T     ++V R+ +G +  VAL  
Sbjct: 686 SMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTL----VNVSRIYSGSQFSVALSC 741

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G +YTWGKG+ G LGHG+     +P+ + +L+
Sbjct: 742 DGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALE 774



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 24/298 (8%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             ++S++H   I++  A N   + G++   L S+  VFS G    G LGHG       S+ 
Sbjct: 4015 LVESLQHV--IIKKVAVN---SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYD 4065

Query: 156  R---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R   I   S   V+ ++    H+A +   G V T G       GH D+   + +P+LVEA
Sbjct: 4066 RPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEA 4124

Query: 213  LKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            L G     +  G      L I    +V + G   +G+LG G +     P  I  L  +G 
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG- 4183

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            V+++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ 
Sbjct: 4184 VIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIAT 4241

Query: 331  GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            G  H VA   SG V+TWG    G LG G       P  + SL      QG  ++  +C
Sbjct: 4242 GSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSL------QGKHIVKVIC 4293



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 27/270 (10%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------VQVSASENHAAFVLQSG 182
            S++F  G +  G LG        +  +RI  P+          +Q++  E     V   G
Sbjct: 3937 STIFGWGHNHRGQLGG-------LDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDG 3989

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTC 240
            +++  G  +    G   T+  +  P LVE+L+ V  K+V   +G      L+  G V + 
Sbjct: 3990 KLYATGYGAGGRLGIGGTDS-VSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSW 4048

Query: 241  GSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G    G+LGHG  D+ DRP  K I  L  +G V+ IA G ++   +T  G V ++G G  
Sbjct: 4049 GEGEDGKLGHGNRDSYDRP--KLIEALSGIG-VIDIACGSAHSACITSQGHVLTWGKGRY 4105

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LGHG+  D+LQP+ ++         +   +GD   + +     V++WG G  G LG G
Sbjct: 4106 GRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4165

Query: 359  DEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
                  +P  + SL       GL V+   C
Sbjct: 4166 GSDGCKIPMKIESLA------GLGVIKVEC 4189



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 10/267 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++  +L S + V+S G+   G LGHG +T      T I       V  +    +++A +
Sbjct: 577 GKHVMVLSSANEVWSWGAGDGGRLGHG-DTVSKEHPTMIVGLHEKQVCGIYCGASYSAAI 635

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             +G++FT G  +    GH +++  +  P  V+ALK      V   +G   +  +T  G 
Sbjct: 636 TIAGELFTWGRGTYGRLGHGNSDDKLV-PTQVQALKSYKVVDVALGSGDAHSMCVTDNGL 694

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +   G    G+LG+G     P P  I  L  V    +I +G  + +A++ +G +Y++G G
Sbjct: 695 LFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVS---RIYSGSQFSVALSCDGTLYTWGKG 751

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGAL 355
               LGHG       P+ ++    +G  +  V+ G  H +AL SSG +Y WG+  Y    
Sbjct: 752 HGGRLGHGNSEHSNVPKLVRAL--EGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQIC 809

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQGLS 382
             G   D  +  P+ +    L + G++
Sbjct: 810 PSGVSRDPIIHSPILTTPPTLRISGMT 836



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 5/144 (3%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            I   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 2890 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 2946

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006

Query: 351  YCGALGHGDEIDKTLPEPLSSLKS 374
              G LGHG+ +    P+ + SL++
Sbjct: 3007 EDGKLGHGNRLTLEKPKLIESLRT 3030



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P +    +E    +  +QV    N    LT  G V +  SN+   +          PK+ 
Sbjct: 510 PRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSLHSNSSENIA---------PKAF 560

Query: 263 APLEEVGSVVQIAA---GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             LE V  VVQIAA   G   M+  + N V +S+G+G    LGHG+   +  P  I    
Sbjct: 561 EGLEGV-HVVQIAAHCEGKHVMVLSSANEV-WSWGAGDGGRLGHGDTVSKEHPTMIVGLH 618

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            K   V  +  G  +  A+  +G ++TWG+G  G LGHG+  DK +P  + +LKS+  V
Sbjct: 619 EK--QVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVV 675



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    +       VVQV+     
Sbjct: 3036 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ-LKPKLVTTLQGHRVVQVACGSRD 3094

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +   + G VF+ GD      G R  +     P  VE L  V   Q+  G  F+  LT
Sbjct: 3095 AQTLCLTEEGLVFSWGDGDFGKLG-RGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALT 3153

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P  I  L     V+ +A G  + LAVT +G VY+
Sbjct: 3154 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRG-KKVIHVAVGALHCLAVTDSGQVYA 3212

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +      G+ V RV+ G  H VA
Sbjct: 3213 WGDNDHGQQGSGNTVVNKKPNLVLGL--DGVFVNRVACGSSHSVA 3255



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            ++   L  + SV++ G      LGHG  T       ++       ++ ++    H     
Sbjct: 4192 QFSVALTRSGSVYTWGKGDYHRLGHG-NTDHVRRPKKVAALQGKKIISIATGSLHCVACS 4250

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             SG+VFT GDN     G   T   I RPRLV++L+G    +V  G
Sbjct: 4251 DSGEVFTWGDNDEGQLGD-GTVTAIQRPRLVQSLQGKHIVKVICG 4294


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 59/313 (18%)

Query: 115  QITTGRYHTLLISNSSV-FSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            ++  G+  T +I+N+ V  SCG    G LG G   ++ +    + +       +   + S
Sbjct: 784  KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGS 843

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + HA  + ++G+VF+ GD      GH +++R   RPR +EAL+G    QV  G   +  +
Sbjct: 844  DGHAIALTENGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGQEVVQVACGFKHSAVV 902

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVV 290
            TI G + T G   +G+LGHG T ++  P+ +  LE    + Q+A G ++ + V+  N  V
Sbjct: 903  TIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENY-IIGQVACGLNHTVIVSQDNLTV 961

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--------------------------- 323
            ++ G G    LG G    +  P  I+   R GI                           
Sbjct: 962  WACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRM 1021

Query: 324  -----------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCG--ALGHG 358
                                   H++ +S G EH +AL S G VYTWG    G   LGH 
Sbjct: 1022 CGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHT 1081

Query: 359  DEI-DKTLPEPLS 370
            + + + TL E LS
Sbjct: 1082 NHVQEPTLVESLS 1094



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 10/180 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+L ++      ++V  G N T  +   G V +CG  ++G+LG G++ D      I+
Sbjct: 770 VLVPQLTKSFH--EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHIS 827

Query: 264 PLEEVGSVVQIAAGPS----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            L+  G +V+  A  +    + +A+T NG V+S+G G    LGHG    + +PR I+  R
Sbjct: 828 ALQ--GFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALR 885

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G  VV+V+ G +H   +   G ++T+G G  G LGHG   +K +PE + +L++++  Q
Sbjct: 886 --GQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQ 943



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 103/266 (38%), Gaps = 58/266 (21%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L  N  VFS G    G LGHG    Q     +I       VVQV+    H+A V   G++
Sbjct: 850  LTENGEVFSWGDGDYGKLGHGNSDRQRRP-RQIEALRGQEVVQVACGFKHSAVVTIDGKL 908

Query: 185  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-HVHTCGS 242
            FT G       GH   TN+ I  P  V AL+     QV  GLN T  ++     V  CG 
Sbjct: 909  FTFGYGDYGRLGHGSTTNKKI--PERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGD 966

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVG--------------------------------- 269
              +G+LG G T  + +P  I  L  VG                                 
Sbjct: 967  GDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCE 1026

Query: 270  ------------------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
                               ++ I+ G  + +A+T  G+VY++GS ++  LG G  +   +
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086

Query: 312  PRAIQTFRRKGIHVVRVSAGDEHVVA 337
            P  +++   K I   ++SAG  H  A
Sbjct: 1087 PTLVESLSGKNIR--QISAGRTHSAA 1110


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 22/276 (7%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS---A 170
            QI  G+  T +I +N +V +CG    G LG G  +    S T ++      V Q+     
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHSLTIVSALQGFVVTQLVTSVG 1083

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  
Sbjct: 1084 SDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQIACGFKHSAV 1142

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T+ G + T G+  +G+LG G   +R TP+ +  LE    +  +A G ++ + V+ +G  
Sbjct: 1143 VTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENY-HIGHVACGLNHTVCVSADGST 1201

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
             ++FG G    LG G    +  P  I+     G+ V +V+ G +  VAL   G+V TWG+
Sbjct: 1202 TWAFGDGDYGKLGLGNTSAKSTPVKIEAL--SGLKVKKVACGTQFSVALTRDGFVLTWGQ 1259

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
                        D+ + +  + ++ H   Q ++ LA
Sbjct: 1260 ------------DRLIGQTEAQMRGHCTPQKVTTLA 1283



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 14/178 (7%)

Query: 116  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQV 168
            +  G  HT+ +S   S+ ++ G    G LG G  + +       + + +     A   Q 
Sbjct: 1185 VACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQF 1244

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            S +     FVL  GQ    G   +   GH         P+ V  L G   ++V  G   T
Sbjct: 1245 SVALTRDGFVLTWGQDRLIGQTEAQMRGH-------CTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              LT  G+V   G N  GQLG G T     P+ +  L     + QI+AG ++  A +G
Sbjct: 1298 LALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAAWSG 1355


>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 529

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 14/243 (5%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG  T +       +      V  ++    H   +++SG++F  G+ S+   G  DTN
Sbjct: 238 LGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALMESGELFAWGNGSNGRLGLGDTN 297

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
               RP        V  + +  G + +  L+  G  +T G N  GQ GHG T D+ T + 
Sbjct: 298 D---RPESCSTSVPVRFRHIFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQE 354

Query: 262 IAPLE---EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--------CLGHGEQHDEL 310
           I   E   E   V   A G  + L  T +G VYS G G            LGHG+    L
Sbjct: 355 IESFEDGEEAECVTYAAGGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRL 414

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +P  IQ+       +V+V+ G +H +A+ +SG VYTWG G  G LGHGDE     P  + 
Sbjct: 415 KPTLIQSLEDAREEIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVR 474

Query: 371 SLK 373
           +++
Sbjct: 475 TME 477



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 126/276 (45%), Gaps = 34/276 (12%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PE---TTQCVSFTRINFPSAAHV 165
            +  G  HTL L+ +  +F+ G+   G LG G     PE   T+  V F  I F  A+H 
Sbjct: 263 DLACGLGHTLALMESGELFAWGNGSNGRLGLGDTNDRPESCSTSVPVRFRHI-FCGASHS 321

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--- 222
           + +S            G+ +T G N+   CGH  TN       +     G   + VT   
Sbjct: 322 LGLS----------WDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAA 371

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQ--------LGHGDTLDRPTPKSIAPLEEV-GSVVQ 273
            G   T F T  G V++CG              LGHGD   R  P  I  LE+    +V+
Sbjct: 372 GGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVK 431

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A G  + LAV+ +G VY++GSG+N  LGHG++     P  ++T   +G HV    AG E
Sbjct: 432 VACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTM--EGRHVKDAKAGCE 489

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           H V L     +++ G+G  G LGHGD   +  P  +
Sbjct: 490 HTVFLTYDHELWSCGQGDSGRLGHGDSQTRKRPTKI 525



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 15/148 (10%)

Query: 235 GHVHTCGSNTHGQLGHGD-----------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G++ + G   HG+LGHG            T ++  P  IA   ++    +I +  ++ +A
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDI-LFRRIDSLSTHSIA 220

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G   ++G+G  + LGHG    E  PR I+  R KG  V  ++ G  H +AL  SG 
Sbjct: 221 ITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKG-RVRDLACGLGHTLALMESGE 279

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           ++ WG G  G LG GD  D+  PE  S+
Sbjct: 280 LFAWGNGSNGRLGLGDTNDR--PESCST 305



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P ++ A + +  +++ +    +  +T +G     G+    +LGHG +    TP+ I  L 
Sbjct: 197 PTMIAATRDILFRRIDSLSTHSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLR 256

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             G V  +A G  + LA+  +G ++++G+GSN  LG G+ +D  +P +  T     +   
Sbjct: 257 LKGRVRDLACGLGHTLALMESGELFAWGNGSNGRLGLGDTND--RPESCST--SVPVRFR 312

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +  G  H + L   G  YTWGK   G  GHG   D+   + + S +
Sbjct: 313 HIFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFE 359



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 28/223 (12%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVSAS 171
           I  G  H+L +S +   ++ G +  G  GHG    Q       +F     A  V   +  
Sbjct: 314 IFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGG 373

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR----PIF---------RPRLVEALKGVPC 218
             H  F   SG+V++CG      CG++D+ R    P+          +P L+++L+    
Sbjct: 374 WEHTLFSTASGRVYSCG------CGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDARE 427

Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA- 275
           +  +V  G + +  ++  G V+T GS T+G+LGHGD     TP  +  +E  G  V+ A 
Sbjct: 428 EIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTME--GRHVKDAK 485

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           AG  + + +T +  ++S G G +  LGHG+     +P  I  F
Sbjct: 486 AGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTRKRPTKIGLF 528


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GNQPTPCRISAL--QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 277 APVVVEKDRI 286



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 89

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEVYVWGYN 208

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +S+L+
Sbjct: 209 GNGQLGLGSSGNQPTPCRISALQ 231



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 6/171 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLMPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
                V  V+ G  H + L S G V+ WG    G +G G   ++ +P  ++
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GNQPTPCRISAL--QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 APVVVEKDRI 310



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEVYVWGYN 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +S+L+
Sbjct: 233 GNGQLGLGSSGNQPTPCRISALQ 255



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 6/167 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLMPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                V  V+ G  H + L S G V+ WG    G +G G   ++ +P
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIP 195


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 164/379 (43%), Gaps = 30/379 (7%)

Query: 44  GSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHS 103
           G + L P+   S   L    + AL   +A +    Q E+     G W R+ + +     S
Sbjct: 289 GIYSLVPKLLESTAMLDVHNI-ALGGKHAALVTK-QGEVFCWGQGKWGRLGQKIDMDISS 346

Query: 104 SDIVETSAG--NMQITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRIN 158
             IV++  G     +  G YHT  +++S  V++ G+ +C   +L  G   +Q +   R+ 
Sbjct: 347 PKIVDSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIP-QRLG 405

Query: 159 FP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
            P     +  V+  E H A V   G++FT GD +    GH D  R    P+ VE+L G+ 
Sbjct: 406 GPLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLNGLR 464

Query: 218 CKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            +    G   T            + +  G + T G    G+LGH D  ++  P  +  L 
Sbjct: 465 VRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLV 524

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +    VQ++ G    +A+T  G V++ GS     LG+    D++    I   + K   V 
Sbjct: 525 DY-DFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKV---VIVEGQLKQEFVK 580

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSV 383
            +S G  HV  L S+G VYTWG+G  G LG GD  D+  P   E L   + +    G S 
Sbjct: 581 VISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSF 640

Query: 384 LAEVC--PTIVQEDTRSCS 400
            A +C    I   D  +CS
Sbjct: 641 TAAICLHKPISISDQSTCS 659


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF 
Sbjct: 50  KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFW 108

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 109 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 167

Query: 247 QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGH 303
           +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 168 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 225

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 226 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 283

Query: 364 TLPEPLSSLKS----HLAVQGLSVLA 385
             P+ +  L+     H+AV  L  LA
Sbjct: 284 RKPQVVEGLRGKKIVHVAVGALHCLA 309



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VF  G    G LGH      C     I       +  ++   +H+A +
Sbjct: 94  GRHATALTVDGKVFWWGEGDDGKLGH-FSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 152

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 153 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 211

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 212 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 270

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             F LGHG      +P+ ++  R K   +V V+ G  H +A+  SG VY WG
Sbjct: 271 DYFRLGHGSDVHVRKPQVVEGLRGK--KIVHVAVGALHCLAVTDSGQVYAWG 320



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 155 TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
           ++I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 16  SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI-- 73

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PR + AL     K+V   +G      LT+ G V   G    G+LGH   ++   P+ I  
Sbjct: 74  PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEA 133

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 134 LK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 190

Query: 325 VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q
Sbjct: 191 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 247


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 28/274 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--------PETTQCVSFTRINFPSAAH 164
           + +  G  H+L + ++ +V++ G +  G LG G        P+  Q +S           
Sbjct: 150 VAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLS----------G 199

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV  SA   H+   L  G V+  G+N+S   G+  +      P  V+ L+GV    V AG
Sbjct: 200 VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMA--VAAG 257

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             ++  L   G +   GSN HGQ G G T+   +   +  L     VV +AAG ++ LAV
Sbjct: 258 GLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLS---GVVAMAAGSAHSLAV 314

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G ++++G+     LG G + D   P+ +Q   R    VV V+AGD H +AL + G V
Sbjct: 315 RSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSR----VVAVAAGDGHSIALCADGTV 370

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +TWG  + G L HG   D  +P  +  L   +AV
Sbjct: 371 WTWGYNHDGQLAHGSTNDSPVPLHVRELSGVVAV 404



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 16/263 (6%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L ++S+ SV++ G +  G LG G  ++   S   +     + V  VS
Sbjct: 399 SGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS---SAEPVRVQGLSGVAAVS 455

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  NH+      G V+  G NS    G   T+  +  P  V  L GV  + ++AG N + 
Sbjct: 456 AGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV-PVRVRGLSGV--ETISAGFNHSL 512

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G +   G N  GQLG G T +   P  +  L  V +V    AG ++ LAV  +G 
Sbjct: 513 ARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVF---AGLNHSLAVRTDGS 569

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  S   LG G  +    P  +Q     G+  V  +AG  H +++ S G +++WG 
Sbjct: 570 VWAWGINSFGQLGEGTTNTSFAPVRVQGL--SGMETV--AAGSLHSLSVGSDGSMWSWGN 625

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
            + G LGHG  +    P P+ SL
Sbjct: 626 NHHGQLGHG--LPGRSPTPVRSL 646



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 132/317 (41%), Gaps = 57/317 (17%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + ++ G  H+L +  + +V++ G +  G LG G   +       +  P  + VV VS
Sbjct: 46  SGVVAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHS---EPVRVPGLSGVVAVS 102

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A +NH+  +   G V+  GDN+S   G     +    P  +E L  V    V AG N + 
Sbjct: 103 AGDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSEVVA--VAAGGNHSL 160

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            +   G V   G N  GQLG G+ L  R  PK +  L     VV  +AG ++ +    +G
Sbjct: 161 AVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLS---GVVAASAGWAHSMVALSDG 217

Query: 289 VVYSFGS------GSNFCLGHGEQHDELQP-RAIQTFRRKGIH----------------- 324
            V+++G+      G+   +G+G   +++Q  R +      G++                 
Sbjct: 218 SVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSND 277

Query: 325 -----------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                                  VV ++AG  H +A+ S G ++ WG  Y G LG G   
Sbjct: 278 HGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRK 337

Query: 362 DKTLPEPLSSLKSHLAV 378
           D   P+ +  L   +AV
Sbjct: 338 DHDTPKRVQGLSRVVAV 354



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 131/295 (44%), Gaps = 41/295 (13%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSF 154
           SS  V   +G + +  G  H+L + S+ ++++ G++  G LG G       P+  Q +S 
Sbjct: 291 SSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLS- 349

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL 213
                     VV V+A + H+  +   G V+T G N      H  TN  P+  P  V  L
Sbjct: 350 ---------RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPV--PLHVREL 398

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            GV    V AG   +  +   G V   G N  GQLG G       P  +  L     V  
Sbjct: 399 SGVVA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLS---GVAA 453

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGD 332
           ++AG ++ LA   +G V+++G  S   LG G   + L P      R +G+  V  +SAG 
Sbjct: 454 VSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALVP-----VRVRGLSGVETISAGF 508

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
            H +A  S G ++ WG  Y G LG G   + ++P         + VQGLS +A V
Sbjct: 509 NHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVP---------VRVQGLSGVAAV 554



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG + +  L   G V   G N  GQLG G +     P  +  L     VV ++AG  +
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLS---GVVAVSAGEGH 57

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALD 339
            LA+  +G V+++G  +   LG G      +P      R  G+  VV VSAGD H +AL 
Sbjct: 58  SLALHRDGTVWAWGDNALGQLGDGTSDSHSEP-----VRVPGLSGVVAVSAGDNHSLALR 112

Query: 340 SSGYVYTWGKGYCGALG 356
           S G V+ WG      LG
Sbjct: 113 SDGSVWAWGDNNSDQLG 129



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGD 332
           +AAG  + LA+  +G V+++G  +   LG G      +P      R +G+  VV VSAG+
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEP-----VRVRGLSGVVAVSAGE 55

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            H +AL   G V+ WG    G LG G     + P  +  L   +AV
Sbjct: 56  GHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPGLSGVVAV 101


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQVS    H+  + ++ +VF+ G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV+ G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ++ G  + LA++    V+S+G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q++ G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVSCGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VFS G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 120/242 (49%), Gaps = 11/242 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + +V +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 406 IEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSD 465

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
            H   V   G+VF+ GD      GH ++    + P++++  L G     V+AG   +  +
Sbjct: 466 GHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKY-PKIIQGPLLGKVVVCVSAGYRHSAAV 524

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G +V
Sbjct: 525 TNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG---QVACGSSHTIAVAQDGRIV 581

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 639

Query: 351 YC 352
            C
Sbjct: 640 SC 641



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 129/268 (48%), Gaps = 22/268 (8%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL ++    VFS G    G LGHG   TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAVTAEGEVFSWGDGDYGKLGHGNSATQKYPKI-IQGPLLGKVVVCVSAGYRHSAAVT 525

Query: 180 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
             G+++T G+      GH D+ +R +  P LV+ + GV   QV  G + T  +   G  V
Sbjct: 526 NDGELYTWGEGDFGRLGHSDSHSRNV--PTLVKDISGV--GQVACGSSHTIAVAQDGRIV 581

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSG 296
            + G   +G+LGHGDT     PK I  L   G ++ ++ AG    LA+T  G V+++G G
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 639

Query: 297 SNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           S  CLG G  +   L+PR I+      I  + +S GD H +AL     V+ WG    G  
Sbjct: 640 S--CLGCGSSETTSLRPRLIEELSITKI--IDISCGDSHCLALSHENEVFAWGNNAMGQC 695

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           G G         P++  K  + ++G+S+
Sbjct: 696 GQGHT-----STPVTKPKKVIGLEGVSI 718



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 6/185 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I +P+L +       + + AG   T  ++  G V  CG  
Sbjct: 372 VYVWGSNSSHQLAE-GTLEKILQPKLAQGFSDA--QMIEAGQYCTFSVSADGAVKACGKG 428

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LAVT  G V+S+G G    L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG    +  P+ IQ     G  VV VSAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 489 GHGNSATQKYPKIIQG-PLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSH 547

Query: 362 DKTLP 366
            + +P
Sbjct: 548 SRNVP 552



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V   G  ++G+LG G++ D  TP  I+ L+   V  +V    
Sbjct: 3893 QQVVCGQNCTFLVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYG 3952

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + LA+T  G V+S+G G    LGHG    + +P+ I+    +G  VV+++ G +H  
Sbjct: 3953 SDGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGL--QGEEVVQLACGFKHSA 4010

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + + G ++T+G G  G LG     +K +PE +++L  H
Sbjct: 4011 VVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGH 4049



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 36/258 (13%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T L+ +N +V + G    G LG G  +    + T I+      V Q+     
Sbjct: 3894 QVVCGQNCTFLVQANGTVLAVGEGSYGRLGQG-NSDDLYTPTIISALQGYVVTQLVTSYG 3952

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + ++G+VF+ GD      GH ++ R   RP+ +E L+G    Q+  G   +  
Sbjct: 3953 SDGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACGFKHSAV 4011

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +T  G + T GS   G+LG   T ++  P+ +  L+      ++   P  ML        
Sbjct: 4012 VTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAML-------- 4063

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
                          + H+  +P+ I     +G+ +  ++ G EH++AL ++G VY WG  
Sbjct: 4064 --------------KNHN--RPQIIPAL--EGVFIEDIAVGCEHILALSNTGDVYAWGCN 4105

Query: 351  YCGA---LGHGDEIDKTL 365
             C A   LGH + + + +
Sbjct: 4106 -CEAQLGLGHSNPVKEPI 4122



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 7/148 (4%)

Query: 234  RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +  V+  G+  HGQL   G +   PT   +AP   +    Q+  G +    V  NG V +
Sbjct: 3859 KSEVYLWGNGRHGQLADAGTSASVPT---LAP--SLSQTQQVVCGQNCTFLVQANGTVLA 3913

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 351
             G GS   LG G   D   P  I   +   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3914 VGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGD 3973

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G LGHG+   +  P+ +  L+    VQ
Sbjct: 3974 YGKLGHGNSERQRRPKQIEGLQGEEVVQ 4001



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  GSN+  QL  G TL++     +A  +       I AG     +V+ +G V + G G
Sbjct: 372 VYVWGSNSSHQLAEG-TLEKILQPKLA--QGFSDAQMIEAGQYCTFSVSADGAVKACGKG 428

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 355
           S   LG G+ +++  P+ +     + +  V  S G D H +A+ + G V++WG G  G L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 356 GHGDEIDKTLPE 367
           GHG+   +  P+
Sbjct: 489 GHGNSATQKYPK 500



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   VF+ G   C  LG G   T  +    I   S   ++ +S  ++H   +    +V
Sbjct: 627 LTSAGQVFAWGCGSC--LGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEV 684

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIR 234
           F  G+N+   CG   T+ P+ +P+ V  L+GV  +Q+TAG    L +T   T R
Sbjct: 685 FAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTAVPTDR 738



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 31/185 (16%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H+L ++ +  VFS G    G LGHG    Q     +I       VVQ++    H+A V  
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSERQRRP-KQIEGLQGEEVVQLACGFKHSAVVTA 4014

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF----------------------------RPRLVEA 212
             G++FT G   S   G R T+  +                             RP+++ A
Sbjct: 4015 DGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPA 4074

Query: 213  LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            L+GV  + +  G      L+  G V+  G N   QLG G +     P  +  L+   ++ 
Sbjct: 4075 LEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQG-KNIR 4133

Query: 273  QIAAG 277
            QI+AG
Sbjct: 4134 QISAG 4138



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           +VY +GS S+  L  G     LQP+  Q F    +    + AG     ++ + G V   G
Sbjct: 371 MVYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQM----IEAGQYCTFSVSADGAVKACG 426

Query: 349 KGYCGALGHGDEIDKTLPEPL 369
           KG  G LG GD  ++++P+ L
Sbjct: 427 KGSYGRLGLGDSNNQSMPKKL 447


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 21/260 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG  DE ++  P  L +L++
Sbjct: 230 LGLNDETNRAYPTQLKTLRT 249



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 14/264 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGHG   ++ LP  +  L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMEL 299



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S+   V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 346
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 133/275 (48%), Gaps = 18/275 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H+ +I++S  +   G   CG LG G    + +   R+   S  +V+ VS S+ 
Sbjct: 46  EVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD--LKDIVIPRV-MTSIKNVINVSCSDR 102

Query: 174 HAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H+A +L+ G+++T G N S   G         N  I  P+LVE L      +V+ G   T
Sbjct: 103 HSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHT 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT     +T G    G+LGHGDT D  TPK I  L  + SV  I  G  +   +  NG
Sbjct: 163 ACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGL-SVKNIVCGGHHTAILLNNG 221

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            VY  G G+   LG G + D   P+ +Q +   K I    VS G +H   + + G VYTW
Sbjct: 222 KVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIK--EVSLGYQHSAVITTKGKVYTW 279

Query: 348 GKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQ 379
           G+G  G LGH   G E D   P+ +  L S +AV 
Sbjct: 280 GQG--GRLGHIYNGPEPDILSPKLVEKLNSIIAVN 312



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 11/207 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V++VS    H A +    + +T G       GH DTN  ++ P+L+E+L G+  K +  G
Sbjct: 152 VIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTN-DVYTPKLIESLAGLSVKNIVCG 210

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  L   G V+ CG    G+LG G   D   PK +       S+ +++ G  +   +
Sbjct: 211 GHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVI 270

Query: 285 TGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           T  G VY++G G    LGH   G + D L P+ ++      I  V +S G  H V + + 
Sbjct: 271 TTKGKVYTWGQGGR--LGHIYNGPEPDILSPKLVEKLNS--IIAVNISCGHSHTVVISNI 326

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEP 368
           G VY W  G    LGHG  ID    +P
Sbjct: 327 GDVYAW--GVTRNLGHG-VIDSKPNDP 350



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 18/191 (9%)

Query: 205 FRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P+L+E+L      K+V  G + +  +T  G +   G    GQLG GD  D   P+ + 
Sbjct: 30  IEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMT 89

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ------PRAIQT 317
            ++   +V+ ++    +  A+  +G +Y++G   +  LG G  +  L       P+ ++ 
Sbjct: 90  SIK---NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEK 146

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +   V++VS G  H   L      YTWG G  G LGHGD  D   P+ + SL     
Sbjct: 147 LLNE--KVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESL----- 199

Query: 378 VQGLSVLAEVC 388
             GLSV   VC
Sbjct: 200 -AGLSVKNIVC 209



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 5/187 (2%)

Query: 102 HSSDIVETSAG--NMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           ++  ++E+ AG     I  G +HT +L++N  V+ CG    G LG G +    +      
Sbjct: 191 YTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQG 250

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
             +   + +VS    H+A +   G+V+T G        +      I  P+LVE L  +  
Sbjct: 251 SLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNSIIA 310

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             ++ G + T  ++  G V+  G   +  LGHG    +P   ++ P+ +  ++VQ++ G 
Sbjct: 311 VNISCGHSHTVVISNIGDVYAWGVTRN--LGHGVIDSKPNDPTLHPILQNKNIVQVSCGK 368

Query: 279 SYMLAVT 285
           ++ +A++
Sbjct: 369 THTIALS 375


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    +   A N   + G++   L S   ++S G +  G LGHG   + C    
Sbjct: 2841 LLESIQHV--FIRKVAVN---SGGKHCLALSSEGELYSWGEAEDGKLGHG-NRSPCDRPR 2894

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  SG+++T G       GH D+   + +P+LVEAL+G
Sbjct: 2895 VIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 2953

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 2954 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3012

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3013 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3070

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3071 HCVCCTEDGEVYTWGDNDEGQLGDG 3095



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G++++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 2853 VAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 2911

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 2912 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQG-HRVIDVACGSGDAQTLC 2970

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2971 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3028

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 3029 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 3064



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 16/271 (5%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQS 181
            + +   V++CG +  G LG G  ++  +   R     + +VV+   V +   HA  +   
Sbjct: 1816 VTAEGKVYACGEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVD 1874

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G +++ G
Sbjct: 1875 GKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 1933

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSN 298
               +G+LGHGD   +  PK +  L  +G  VVQ+A G   +  LA+T  G+V+S+G G  
Sbjct: 1934 LGEYGRLGHGDNTTQLRPKLVKVL--LGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 1991

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LG G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG
Sbjct: 1992 GKLGRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 2049

Query: 359  DEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
             ++    P+ +  L+     H+AV  L  LA
Sbjct: 2050 TDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 2080



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1865 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1923

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 1924 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 1982

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V+ WG    G  G
Sbjct: 2042 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 2099

Query: 357  HG 358
            +G
Sbjct: 2100 NG 2101



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 1799 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKK 1858

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1859 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1917

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1918 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVVQVACGSRDAQTL 1975

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 1976 ALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERL 2011



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 1827

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 1828 ATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 1887

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 1945

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  VQ
Sbjct: 1946 TTQLRPKLVKVLLGHRVVQ 1964



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G +++ G    G+LGHG+      P+ I  
Sbjct: 2839 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIES 2898

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2899 LRGV-EVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI 2957

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 2958 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 3005



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1913 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRD 1971

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1972 AQTLALTDEGMVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G V++
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTETGQVFA 2089

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2132



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2963 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3021

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3022 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3080

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 3081 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 3126



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2035

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V   G N 
Sbjct: 2036 WTWGKGDYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDND 2094

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2095 HGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2134


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+    +S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  +V+
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 22/238 (9%)

Query: 145 GPETTQCVSFTRINFPSAAHVVQVSA-SENHAAFVLQS-GQVFT--CGDNSSFCCGHRDT 200
           GP+  Q ++        + ++V+++A S+ H    L + G+VF+  CGD      GH DT
Sbjct: 484 GPQLVQSLA--------SRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRL--GHGDT 533

Query: 201 NRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
             P+  P+++ AL G    +    +  G  ++  +T  G ++T G   +G+LGHG + D+
Sbjct: 534 -VPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQ 592

Query: 257 PTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             P  +  L+ +  + V   +G +  LAVT NG V+S+G G    LG G       P+ I
Sbjct: 593 TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +    + + +V+V  G +  +AL   G VYTWGKG    LGHG E     P+ L  LK
Sbjct: 653 EKL--QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLK 708



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G+VF+
Sbjct: 3016 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV 3249

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3250 RKPQVVEGLRGKKIVHVAVGALHCLA 3275



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 13/266 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +  G  + +A+T +G VY++    ++  LGHG      +PR +Q    +G  V+ ++ G 
Sbjct: 4207 VECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGS 4264

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHG 358
             H V     G VYTWG    G LG G
Sbjct: 4265 LHCVCCTEDGEVYTWGDNDEGQLGDG 4290



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQ 3159



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3206



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG               + ++
Sbjct: 3914 MADNENMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG--------------SGTI 3959

Query: 132  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            +  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  +
Sbjct: 3960 YGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+LG
Sbjct: 4019 GGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            HG+      P+ I  L  +  VV +AAG ++   +T  G ++++G G    LGHG+  D+
Sbjct: 4078 HGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQ 4136

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196

Query: 370  SSL 372
             SL
Sbjct: 4197 DSL 4199



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLR 4094



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3178 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3237 DYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3295

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3296 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VVQ+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQA 550



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 9/170 (5%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             + +SG V+T      F   HR    ++  + RPR V+ L+G     +  G       T 
Sbjct: 4216 ALTKSGAVYTW---QVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4272

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             G V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4273 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4321


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 8/263 (3%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           GR HT  L+ + +V++CG +  G LGH     +      ++   A  +V +S  E+H   
Sbjct: 42  GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQIIVALSCGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  S    G  +    I  PR +++L  V   QV  G   +  L+  GH+
Sbjct: 99  LNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHI 158

Query: 238 HTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            + G N +GQLG G T      P+ +  L+ +    QIAAG ++  A+T +G V+ +G  
Sbjct: 159 FSWGQNRYGQLGLGMTGQSISVPQHLQSLQGI-PFAQIAAGGAHSFALTLSGAVFGWGRN 217

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG  + +D   P  ++  R +   V+ +S G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDTNDRCFPALLKALRSQ--RVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQ 379
           H     +  P  +  L  ++  Q
Sbjct: 276 HNSTNHEVNPRKVFELMGNVVTQ 298



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   VFS G    G LG      +C+   R I   S   V QV+    
Sbjct: 89  LSCGESHTLALNDKGQVFSWGLGSDGQLGLN-NFEECIRVPRNIKSLSDVQVAQVACGYW 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + G +F+ G N     G   T + I  P+ +++L+G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  DT DR  P  +  L     V+ I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRS-QRVIYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-SSGYVYTWGKGYC 352
           G+G    LGH   + E+ PR +  F   G  V +++ G +H +A   SSG + ++G G  
Sbjct: 267 GAGGYGQLGHNSTNHEVNPRKV--FELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG     ++  P P+ 
Sbjct: 325 GQLGTRSTCNRKSPAPVK 342



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H AF+L+ G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       ++ G + T  L  +G V + G  + GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  V Q+A G  + LA++  G ++S+G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDV-QVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISV 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +Q+   +GI   +++AG  H  AL  SG V+ WG+   G LG  D  D+  P  L +
Sbjct: 181 PQHLQSL--QGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKA 238

Query: 372 LKSHLAV 378
           L+S   +
Sbjct: 239 LRSQRVI 245


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 10/276 (3%)

Query: 105 DIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           ++V T     +I  G+  T L+ +N SVF+CG    G LG G    +  S   I      
Sbjct: 313 NLVSTFKQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEH-SLVPITELQGY 371

Query: 164 HVVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            ++Q++ S   + H   V  SG+VF+ GD      GH ++ R   +P+ + AL+     Q
Sbjct: 372 CIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQ-RKPKQIIALQAEHVVQ 430

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            + G   +  LT  G V T G   +G LG G    + TP+ I  L+    + QIA G  +
Sbjct: 431 ASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKN-EHISQIACGKDH 489

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA+  NG  +Y++G G    LG G       P  + ++R   + + +++ G +  + L 
Sbjct: 490 TLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYR--NVCLKKIACGSKFSIVLA 547

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           ++GY+YT+G      +   D +D T+P+ +SSL  H
Sbjct: 548 TNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPH 583



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 7/251 (2%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTL +++S  VFS G    G LGHG    Q     +I    A HVVQ S    H+A 
Sbjct: 382 GDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKP-KQIIALQAEHVVQASCGFKHSAV 440

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
           + + G+VFT G       G    N P   P+L+ +LK     Q+  G + T  L   G  
Sbjct: 441 LTKDGKVFTFGQGQYGILGD-GGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKK 499

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++  G    G+LG G T  R  P  +     V  + +IA G  + + +  NG +Y+FG  
Sbjct: 500 LYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNV-CLKKIACGSKFSIVLATNGYLYTFGHK 558

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               +   +  D   P+ + +     I  + ++ G  +++ALD+SG ++ WG    G LG
Sbjct: 559 DFLGIAETDLLDNTIPQIVSSLMPHPI--IDIAVGCNYILALDNSGNIWGWGTNEEGQLG 616

Query: 357 HGDEIDKTLPE 367
            G      LP+
Sbjct: 617 IGTTNPHYLPQ 627



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 12/176 (6%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            +P LV   K V  +++  G N T  L   G V  CG  T+G+LG G + D     S+ P
Sbjct: 310 LQPNLVSTFKQV--REIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDE---HSLVP 364

Query: 265 LEEVGS--VVQIAA---GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + E+    ++Q+A    G  + LAV  +G V+S+G G    LGHG    + +P+ I   +
Sbjct: 365 ITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQ 424

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            +  HVV+ S G +H   L   G V+T+G+G  G LG G    +  P+ + SLK+ 
Sbjct: 425 AE--HVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNE 478



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 12/149 (8%)

Query: 237 VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           V+  GSN HG+L    G T  +P   S         V +I  G +    +  NG V++ G
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVS-----TFKQVREIVCGQNCTFLLQTNGSVFACG 344

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA---GDEHVVALDSSGYVYTWGKGY 351
            G+   LG G   DE     I     +G  +++++    GD H +A+  SG V++WG G 
Sbjct: 345 EGTYGRLGQGTSDDEHSLVPITEL--QGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGD 402

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            G LGHG+   +  P+ + +L++   VQ 
Sbjct: 403 YGKLGHGNSERQRKPKQIIALQAEHVVQA 431



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 5/168 (2%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           QI  G+ HTL ++N+   +++ G    G LG G  + + +     ++ +   + +++   
Sbjct: 482 QIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVC-LKKIACGS 540

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +G ++T G          D       P++V +L   P   +  G N+   L 
Sbjct: 541 KFSIVLATNGYLYTFGHKDFLGIAETDLLDNTI-PQIVSSLMPHPIIDIAVGCNYILALD 599

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
             G++   G+N  GQLG G T     P+ +       ++ +++AG ++
Sbjct: 600 NSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGT-NITRLSAGTTH 646


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 172/380 (45%), Gaps = 36/380 (9%)

Query: 12  ELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKF-RSLVDLAASQLCALHSI 70
           E  SH +  I  +G  S++DL H      +  GS  L   K+  S +D +          
Sbjct: 88  EKESHSLSVIYKNGE-SSLDLVH------SLYGSPRLIQNKYLHSNLDCSEPFFSPRQKA 140

Query: 71  YAGMS---RNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
           ++ +      +  EL+NR   N    LR ++S E   D        ++ + G  +    S
Sbjct: 141 WSELDSYLEKISPELVNRVKNN----LRDIRSAETIKDQRIIQMPKLKQSEGS-NAATDS 195

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFT 186
              +F  G  L  +  HG      +S  R+   S    VQ ++  E HAA V + GQVF+
Sbjct: 196 LKDIFVWGDVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFS 255

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+ +    GH+ T+  +  P+++++L   P K +  G  +T  +++ G ++  G   H 
Sbjct: 256 WGEENGGRLGHK-TSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHS 314

Query: 247 QLGHGDTLDRPTP----KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            LG G    + +P    K I+  + + SV++IA G  +   ++  G +Y++G G+   LG
Sbjct: 315 -LGFGKNQCQRSPWFPHKLISTSDGI-SVLKIACGQWHTAIISSLGKLYTYGYGTFGVLG 372

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------LDSS---GYVYTWGKGYC 352
           HG+ H  + P+ +++ R  G     V+ G  H  A       L SS   G ++TWG    
Sbjct: 373 HGDTHSVVHPKEVESLR--GSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGG 430

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LGH ++  K +P  + SL
Sbjct: 431 GKLGHTNKKSKLVPTRVESL 450



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V++++  + H A +   G+++T G  +    GH DT+  +  P+ VE+L+G   K V  G
Sbjct: 341 VLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTH-SVVHPKEVESLRGSRAKSVACG 399

Query: 225 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +     T++     G + T G    G+LGH +   +  P  +  L +     Q+
Sbjct: 400 PWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC-DFTQV 458

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G S    +T  GVV++ GS  +  LG+    +      +     K   V  +S G  H
Sbjct: 459 SCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDN--TSICMVEGPLKTEFVKDISCGSSH 516

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  L  +G V+TWGKG  G LG GD +D++ P  + +L+
Sbjct: 517 VAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALE 555



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 8/175 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PRL+++ + +  + +  G      +T +G V + G    G+LGH  +     PK I  L 
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLA 282

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP----RAIQTFRRKG 322
               V  IA G  Y  AV+ +G +Y +G G +  LG G+   +  P    + I T    G
Sbjct: 283 ST-PVKTIAFGAKYTCAVSVSGELYEWGEGIH-SLGFGKNQCQRSPWFPHKLIST--SDG 338

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           I V++++ G  H   + S G +YT+G G  G LGHGD      P+ + SL+   A
Sbjct: 339 ISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRA 393



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 17/165 (10%)

Query: 116 ITTGRYHTLLISNSS-----------VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +  G +HT  I  +S           +F+ G +  G LGH  + ++ V  TR+       
Sbjct: 396 VACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVP-TRVESLIDCD 454

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEA-LKGVPCKQVT 222
             QVS   +  A +  +G VFT G       G+ R  N  I    +VE  LK    K ++
Sbjct: 455 FTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSIC---MVEGPLKTEFVKDIS 511

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            G +    LT+ G V T G  T GQLG GD +DR +P  +  LE+
Sbjct: 512 CGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALED 556


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  102 bits (255), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 120/266 (45%), Gaps = 21/266 (7%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE------TTQCVSFTRINFPSAAHVV 166
            ++++ G  H  LIS S  +F+ G +  G LGHG +      T + + F R   P    ++
Sbjct: 1221 IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSP----II 1276

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
             V     H+  V     V++ G +     GH   +    RP+++E + G   + + AG  
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSY 280
             T  L   G +++ G    GQLGHG  + +  P  I     V      G + QIA G  +
Sbjct: 1337 HTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGH 1396

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             +  + NG VYS+G G    LGHG      +PR I+  +     V ++S G  + +A   
Sbjct: 1397 SVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALK----GVTKISCGHFYTMATTD 1452

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLP 366
               VY+WG G    LGHG + ++  P
Sbjct: 1453 LKNVYSWGLGEHMKLGHGSDKNEATP 1478



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 11/217 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKG-VPCKQVTA 223
            ++VS   +H A + +SG++FT G N S   GH  D  +    P+ +E  +G  P   V  
Sbjct: 1221 IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYM 281
            G   +  +     V++ G +  GQLGHG  ++ +  PK I  +   G  +Q IAAG ++ 
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDIS--GQKIQAIAAGFAHT 1338

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-----VVRVSAGDEHVV 336
            + +  +G +YSFG G    LGHG    +  P  I+     GI      + +++ G  H V
Sbjct: 1339 IVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSV 1398

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
                +G VY+WG G  G LGHG+      P  + +LK
Sbjct: 1399 ICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALK 1435



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 18/239 (7%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + +  G  H++ + S+  V+S G    G LGHG   T+ VS  R   I   S   +  ++
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHG---TKSVSQNRPKIIEDISGQKIQAIA 1332

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL-VEALKGV-----PCKQVTA 223
            A   H   + +SG++++ G       GH          R+ +  + G+        Q+  
Sbjct: 1333 AGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIAC 1392

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G   +   +  G V++ G    GQLGHG+      P+ I   E +  V +I+ G  Y +A
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLI---EALKGVTKISCGHFYTMA 1449

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             T    VYS+G G +  LGHG   +E  PR +  F +K  +V ++  G  H + L   G
Sbjct: 1450 TTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQK--NVSKIVCGLNHTITLTYPG 1506



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 82/344 (23%), Positives = 142/344 (41%), Gaps = 75/344 (21%)

Query: 101  EHSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 157
            ++   I+E  +G     I  G  HT+++  S  ++S G    G LGHG   ++ +  TRI
Sbjct: 1314 QNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIP-TRI 1372

Query: 158  NFPS-------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
               +          + Q++    H+     +G+V++ G       GH +    I RPRL+
Sbjct: 1373 ELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNY-ESIARPRLI 1431

Query: 211  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK---------- 260
            EALKGV   +++ G  +T   T   +V++ G   H +LGHG   +  TP+          
Sbjct: 1432 EALKGV--TKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNV 1489

Query: 261  ----------------------SIAPLEEVGSVVQIA-----------------AGPSYM 281
                                  S++  ++V   + +A                  G S  
Sbjct: 1490 SKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGR 1549

Query: 282  LAVTGNGVV---YSFGSGSNFCLGHGEQ-----HDELQPRAIQTFRRKGIHVVRVSAGDE 333
            L +  N  V   Y+ G+G +  LG G        D+  P AI+      ++++ +S G +
Sbjct: 1550 LGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGV--NALNLIDISCGTD 1607

Query: 334  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EPLSSLKSH 375
                + S+G +Y WG G  G +G+G   D  +P   PL+  K++
Sbjct: 1608 FTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPIRIPLTDSKAN 1651



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 7/109 (6%)

Query: 256  RPTPK----SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            +P P+     + PL+     ++++ G  ++  ++ +G ++++G   +  LGHG    ++Q
Sbjct: 1201 KPDPELMICPMPPLKNEKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQ 1260

Query: 312  --PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              P+ ++ FR K   ++ V  G EH + +DS   VY+WG+   G LGHG
Sbjct: 1261 TTPKRLEFFRGKS-PIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHG 1308


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score =  102 bits (255), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 23/276 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ---- 180
           L +   +++ G +   VLG G E  +     ++NF SA  V QVS   +H A +++    
Sbjct: 55  LKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISE 114

Query: 181 -SGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEA-LKGVPC----------KQVTAG 224
            SG+V+T G        +  GH +      +  L E+    +PC           +++ G
Sbjct: 115 ASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCG 174

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  L+  G V   G   +G LG G+  D  +P  I        V+ IAAG  + L  
Sbjct: 175 ANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCC 234

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
             +G V+++GS SN  LG G  +  +  P  I++  +   H+  V+AG+ H   +DS GY
Sbjct: 235 NEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ--YHITLVAAGESHSGCIDSFGY 292

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           +YTWG G  G LGHG + D  +P  +  + S   VQ
Sbjct: 293 IYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQ 328



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 18/224 (8%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +NFP  A + ++S   NH+  +  SG VF  G     C G  + N  ++ P  +EA  G 
Sbjct: 160 VNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELN-DVYSPVKIEA--GP 216

Query: 217 PCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV 272
             K+V    AG   +      G V   GSN++G+LG G +    T P  I  L +   + 
Sbjct: 217 TDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQY-HIT 275

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +AAG S+   +   G +Y++G+G +  LGHG Q D   PR I+      +  V+++ G 
Sbjct: 276 LVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGI--SSLPFVQLTLGA 333

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            + +AL  SG VY W     GA  H  EI  +LP  + +  SH+
Sbjct: 334 FNSMALSQSGEVYIW-----GAKQH--EI-ISLPTKIDAFDSHI 369



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 30/241 (12%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKG 215
           V Q++   +H   ++  G +F  GDN     G  DT R           F     E    
Sbjct: 490 VRQIACGTSHTLLLVYGGTIFAWGDNKYGQLG-IDTRRRKSQDGDKNESFLNEPTEIKFS 548

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            P ++V  G   +    I+G+  + G    GQLG G   +   P  I  L+   +V+++A
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK---NVIEVA 605

Query: 276 AGPSYMLAV-----TGNGVVYSFGSGSNFCLGHGEQH-----DELQPRAIQTFRRK--GI 323
            G  Y   +     TGN  + +  SG  +  G G+       D +    I   R    G 
Sbjct: 606 GGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT 665

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            +++V+ G  H +AL +SG + TWG GY G LG       + P     +K    ++G+ +
Sbjct: 666 PIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNP-----IKIRFPIKGVQI 720

Query: 384 L 384
           +
Sbjct: 721 V 721



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 34/262 (12%)

Query: 115 QITTGRYHTLL-ISNSSVFSCGSSLCGVLG------HGPETTQCVSF----TRINFPSAA 163
           QI  G  HTLL +   ++F+ G +  G LG         +  +  SF    T I F    
Sbjct: 492 QIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEP- 550

Query: 164 HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            + +V+    H+      G  F+ G  D      G     R ++ P  +  LK V   +V
Sbjct: 551 -IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTG---AIRNLYEPAGIVTLKNV--IEV 604

Query: 222 TAGLNFTGFL------------TIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
             G  ++  +            TI  G +   G    G+LG GD + +    +   L   
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLG 664

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             ++++A G S+ LA+T +G + ++G+G    LG         P  I+ F  KG+ +V +
Sbjct: 665 TPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-FPIKGVQIVDI 723

Query: 329 SAGDEHVVALDSSGYVYTWGKG 350
           + G  H +A+ S G ++ WGK 
Sbjct: 724 AVGSYHSMAVSSLGDLWVWGKA 745


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 121/260 (46%), Gaps = 21/260 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH     P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGHE---LPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG  DE ++  P  L +L++
Sbjct: 230 LGLNDEANRAYPTQLKTLRT 249



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 14/264 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       V+Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLLIPELQ---DYVVIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGHG   ++ LP  +  L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMEL 299



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S    V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 346
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 228
             NH+  + +SG VF  G N+   CG    N    R  P  ++ L+ +  + V  G  F+
Sbjct: 206 GGNHSFLISKSGAVFGWGRNN---CGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFS 262

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTG 286
            FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V  
Sbjct: 263 VFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPS 320

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            G VY+FG GS+  LG       + P+ +
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 7/250 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-VFTCGD 189
           V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V++ G 
Sbjct: 70  VCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N +G+LG
Sbjct: 129 GDFGRLGHGDPSD-LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELG 187

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G+ +D 
Sbjct: 188 LGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR 246

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L P  +      G  +V VS G  H +++ SSG +YT G    G LGHGD  D  +P  +
Sbjct: 247 LIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 303

Query: 370 SSLKSHLAVQ 379
            +L   L  Q
Sbjct: 304 QALSDKLISQ 313



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 10/250 (4%)

Query: 122 HTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           H LLIS  +     S    +L    E+++ ++   I+ P      ++ +  N +A     
Sbjct: 13  HVLLISAGA-----SHTVALLSKQFESSEMLARFLISTPLLPESWRLCSKVNASAVNFPG 67

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHTC 240
             V + G       GH DT+  +  P  + A  G     VT G ++T   +  G  V++ 
Sbjct: 68  NVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSW 126

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G    G+LGHGD  D   P  I  L+ +  + QI+ G  + LAVT    V S+G   N  
Sbjct: 127 GWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDCHCLAVTMENKVLSWGRNQNGE 185

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G   D   P+ I  F  +GI +  V+AG EH VA+   G +Y WG G  G LG GD 
Sbjct: 186 LGLGTTKDSHVPQKILAF--EGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 243

Query: 361 IDKTLPEPLS 370
            D+ +PE ++
Sbjct: 244 NDRLIPEKVN 253



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 6/215 (2%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  +T+  S S   V+S G    G LGHG  +   +    I       + Q+S  
Sbjct: 104 VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP-IRALQGLRIKQISCG 162

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H   V    +V + G N +   G   T +    P+ + A +G+  K V AG   +  +
Sbjct: 163 DCHCLAVTMENKVLSWGRNQNGELG-LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 221

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GDT DR  P+ +    +   +V ++ G  + ++++ +G +Y
Sbjct: 222 TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLY 279

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           + G      LGHG+  D L PR +Q    K I  V
Sbjct: 280 THGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 314


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTVEKDRI 310



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 209 TIACGQMCCMAVV 221


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 26/279 (9%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +  GR+HT  +  + +V++ G ++ G LG G  T +    T +  P    V  ++A
Sbjct: 58  GVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTER---HTPVQVPGLTGVTAIAA 114

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
              H   V Q G V+  GDN     G     D + P+  P L           + AG   
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTG------VTAIAAGRRH 168

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +   G V   G N  GQLG G   +R TP  +  L     V  IAAG  + LAV  +
Sbjct: 169 TFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLT---GVTAIAAGDYHTLAVRQD 225

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G+ +   LG G   + L P  +         V  +SAG+ H VA+   G V+ W
Sbjct: 226 GTVWAWGNNALGQLGDGTYTERLTPVQVPGL----TGVTAISAGESHTVAVRQDGTVWAW 281

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
           G    G LG G   D+  P  +  L       G++ +AE
Sbjct: 282 GDNVWGQLGDGTRTDRLTPVQVPGLS------GVTAIAE 314



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 117/270 (43%), Gaps = 18/270 (6%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  GR HT  +  + +V++ G +  G LG G  T +    T +  P    V  ++A
Sbjct: 158 GVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNR---LTPVQVPGLTGVTAIAA 214

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H   V Q G V+  G+N+    G   T      P  V  L GV    ++AG + T  
Sbjct: 215 GDYHTLAVRQDGTVWAWGNNALGQLGD-GTYTERLTPVQVPGLTGVTA--ISAGESHTVA 271

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G V   G N  GQLG G   DR TP  +  L     V  IA G  +  AV  +G V
Sbjct: 272 VRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLS---GVTAIAEGRRHTFAVRQDGTV 328

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           +++  G NF   LG G + D L P  +         V  ++AGD H +A+   G V+ WG
Sbjct: 329 WAW--GLNFWGQLGDGTRSDRLTPVQVPDL----TSVTAIAAGDYHTLAVRQDGTVWAWG 382

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               G LG G   D+  P  +  L    A+
Sbjct: 383 DNVWGQLGDGTYTDRLTPVQVPGLTGVTAI 412



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 120/271 (44%), Gaps = 15/271 (5%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  GR HT  +  + +V++ G +  G LG G   T+    T +  P    V  ++
Sbjct: 307 SGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDG---TRSDRLTPVQVPDLTSVTAIA 363

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A + H   V Q G V+  GDN     G    T+R    P  V  L GV    + AG + T
Sbjct: 364 AGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDR--LTPVQVPGLTGVTA--IAAGESHT 419

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +   G V   G N  GQLG G   DR TP  +  L    SV  IAAG  + LAV  +G
Sbjct: 420 VAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLT---SVTAIAAGDYHTLAVRQDG 476

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV-VRVSAGDEHVVALDSSGYVYTW 347
            V ++G  +   LG G       P  +      G+ V   ++AGD H VA+   G V+ W
Sbjct: 477 TVCAWGFNAYGQLGDGTSSRSPSPVMVPGL--TGVTVFAALAAGDSHTVAVMQDGTVWAW 534

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G    G LG G  ID+ +P  +  L    A+
Sbjct: 535 GLNASGQLGDGATIDRRIPVQIPGLAGVTAI 565



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 17/261 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHTL +  + +V++ G ++ G LG G  T +    T +  P    V  ++A E+H
Sbjct: 362 IAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDR---LTPVQVPGLTGVTAIAAGESH 418

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              + Q G V+  GDN     G   + D   P+  P L           + AG   T  +
Sbjct: 419 TVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS------VTAIAAGDYHTLAV 472

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N +GQLG G +   P+P  +  L  V     +AAG S+ +AV  +G V+
Sbjct: 473 RQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVW 532

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  LG G   D   P  I         V  ++AG  H +A    G V++WG   
Sbjct: 533 AWGLNASGQLGDGATIDRRIPVQIPGL----AGVTAIAAGSAHTLAAGQDGAVWSWGANS 588

Query: 352 CGALGHGDEIDKTLPEPLSSL 372
            G LG G    +  P  +  L
Sbjct: 589 YGQLGDGTTTHRLSPVQVPGL 609



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 122/268 (45%), Gaps = 19/268 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV---VQVSAS 171
           I  G YHTL +  + +V + G +  G LG G   T   S + +  P    V     ++A 
Sbjct: 462 IAAGDYHTLAVRQDGTVCAWGFNAYGQLGDG---TSSRSPSPVMVPGLTGVTVFAALAAG 518

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           ++H   V+Q G V+  G N+S   G   T +R I  P  +  L GV    + AG   T  
Sbjct: 519 DSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRI--PVQIPGLAGVTA--IAAGSAHTLA 574

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
               G V + G+N++GQLG G T  R +P  +  L  V +   +AAG ++ +A+  +G V
Sbjct: 575 AGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLTGVSA---MAAGDAHSVALLQDGTV 631

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++G  S   LG G     L P  +Q     G  V  V+AG  H VAL   G V+ WG  
Sbjct: 632 SAWGRNSWGQLGDGTTAARLTP--VQVHGLTG--VTAVAAGSLHTVALRQDGTVWAWGYN 687

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LG G    +  P  +  L    A+
Sbjct: 688 DLGQLGDGTTTRRLAPVQVQGLTDVTAI 715



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 116/271 (42%), Gaps = 20/271 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ ++ + +V++ G +  G LG G    + +    +  P  A V  ++A   H
Sbjct: 515 LAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIP---VQIPGLAGVTAIAAGSAH 571

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
                Q G V++ G NS    G   T   +  P  V  L GV    + AG   +  L   
Sbjct: 572 TLAAGQDGAVWSWGANSYGQLGDGTTTHRL-SPVQVPGLTGVSA--MAAGDAHSVALLQD 628

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N+ GQLG G T  R TP  +  L     V  +AAG  + +A+  +G V+++G
Sbjct: 629 GTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT---GVTAVAAGSLHTVALRQDGTVWAWG 685

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG G     L P  +Q        V  ++AG  H VA+   G V+ WG    G 
Sbjct: 686 YNDLGQLGDGTTTRRLAPVQVQGL----TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           LG G    ++ P  +  L       G+S LA
Sbjct: 742 LGDGSSTARSTPVQVQELT------GVSALA 766



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 108/245 (44%), Gaps = 15/245 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+ + +V + G +  G LG G   T     T +       V  V+A   H   + Q G V
Sbjct: 625 LLQDGTVSAWGRNSWGQLGDG---TTAARLTPVQVHGLTGVTAVAAGSLHTVALRQDGTV 681

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G N     G   T R +  P  V+ L  V    + AG   T  +   G V   G N 
Sbjct: 682 WAWGYNDLGQLGDGTTTRRL-APVQVQGLTDVTA--IAAGYFHTVAVRQDGTVWAWGYNL 738

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            GQLG G +  R TP  +   +E+  V  +AAG ++ +AV  +G V+++G+ S   LG+G
Sbjct: 739 WGQLGDGSSTARSTPVQV---QELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNG 795

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
              D   P  ++        V  ++AG  H  A+   G+ + WG+   G +G G   D+ 
Sbjct: 796 SSTDRYTPVWVEGL----TGVSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADR- 850

Query: 365 LPEPL 369
            P P+
Sbjct: 851 -PRPV 854



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 92/222 (41%), Gaps = 10/222 (4%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +  P    V   +A E H   V Q G  +  G+N+    G   T      P  V  L GV
Sbjct: 1   MQVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGD-GTRTDRLTPVQVPGLTGV 59

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V AG + T  +   G V   G N  GQLG G   +R TP  +  L     V  IAA
Sbjct: 60  TA--VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT---GVTAIAA 114

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  +  AV+ +G V+++G      LG G + D   P  +Q     G  V  ++AG  H  
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTP--VQLPELTG--VTAIAAGRRHTF 170

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           A+   G V+ WG    G LG G   ++  P  +  L    A+
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTAI 212



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT+ +  + +V++ G +L G LG G  T +    T +       V  ++A   H
Sbjct: 715 IAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARS---TPVQVQELTGVSALAAGYAH 771

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              V Q G V+  G+NS    G+   T+R  + P  VE L GV    +TAG   T  ++ 
Sbjct: 772 TVAVKQDGTVWAWGNNSGTQLGNGSSTDR--YTPVWVEGLTGVSA--LTAGRFHTAAVSP 827

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            G     G N  GQ+G G T DRP P  +
Sbjct: 828 EGFGWAWGRNNFGQVGDGTTADRPRPVDV 856


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 106/230 (46%), Gaps = 9/230 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 564 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 682

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 306
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 683 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 740

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            D   P+ ++    +   +V V+ G  H + + +SG  + +GK   G LG
Sbjct: 741 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTASGKAFAFGKNDYGQLG 788



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 32/296 (10%)

Query: 100 VEHSSDIVETSAGNMQI--TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 635 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 692

Query: 157 INFPSAAHVVQ-VSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDT-NRPIFRPRLVE 211
           I       +V+ VS S  H     + G +   +T G N     GH D+ +R I  P+ VE
Sbjct: 693 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 750

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL       V  G   T  +T  G     G N +GQLG  DT++      +AP++  G +
Sbjct: 751 ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGI-DTME----NQLAPVQVRGGL 805

Query: 272 -----VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFRR 320
                ++I  G  + +A+     +++FG      LG G  +       +LQ +     R 
Sbjct: 806 ERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARL 865

Query: 321 ----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
               +G  +VR++ G  H +A+  +G +Y +G+   G LG GD  ++  P P+   
Sbjct: 866 IDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDF 921



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 92/200 (46%), Gaps = 8/200 (4%)

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 680

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHG 358
           GHG    E  P+ I++   K + +  VS    H V     G    +YT+G+   G LGH 
Sbjct: 681 GHGNTTSESVPKIIRSLENKIVRL--VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN 738

Query: 359 DEIDKTLPEPLSSLKSHLAV 378
           D ID+ +P+ + +L     V
Sbjct: 739 DSIDRKIPQFVEALSDQQIV 758


>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
          Length = 393

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 136/296 (45%), Gaps = 29/296 (9%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+ + SAG    ++    TL  ++ +V + G +  G LG+G  T Q V  T    P   +
Sbjct: 64  DVDQMSAGG--TSSADSFTLARTDKTVKAWGHNSAGQLGNGGNTNQAVPTT---VPRLTN 118

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTA 223
           V  ++A   HA  +  SGQV++ GDNS    G+  T      P  V+   G+P  KQ++A
Sbjct: 119 VKDIAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQ---GMPKAKQISA 175

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G +F+  L   G V+  G   HGQLG G+      P+ +  LE+   +V+I AG  + LA
Sbjct: 176 GCDFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVTGLED---IVKIDAGCYHALA 232

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V S+G      LG+        P  +         V  + AG  H  A+ S  +
Sbjct: 233 ITADNTVKSWGYNLYGQLGNSATKSSTVPVDVDWL----TDVSDIEAGAWHNYAMTSDSH 288

Query: 344 VYTWGKGYCGALGHGDEID--------KTLPEPLSSLKS--HLAV---QGLSVLAE 386
           VY WG    G L  GD+ D        +T P  +  L+   HLA     G++V A+
Sbjct: 289 VYGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRLEGVQHLAAGARHGVAVTAD 344



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 12/142 (8%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG-----PSYMLAVTGNGVVY 291
           V + G+   GQLG+G   D  +P S+  L   G V Q++AG      S+ LA T +  V 
Sbjct: 32  VLSWGAGRTGQLGNGTLSDSLSPASVTSLFR-GDVDQMSAGGTSSADSFTLART-DKTVK 89

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  S   LG+G   ++  P  +        +V  ++AG +H +ALD+SG VY+WG   
Sbjct: 90  AWGHNSAGQLGNGGNTNQAVPTTVPRL----TNVKDIAAGGKHALALDTSGQVYSWGDNS 145

Query: 352 CGALGHGDEID-KTLPEPLSSL 372
            G LG+    D +T+P+ +  +
Sbjct: 146 YGQLGNNRTGDSRTVPDRVQGM 167



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G  +   L+ N  V++ G  + G LG G   T  V            +V++ A   
Sbjct: 172 QISAGCDFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVTGLED---IVKIDAGCY 228

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  +     V + G N     G+  T      P  V+ L  V   +  A  N+   +T 
Sbjct: 229 HALAITADNTVKSWGYNLYGQLGNSATKSSTV-PVDVDWLTDVSDIEAGAWHNYA--MTS 285

Query: 234 RGHVHTCGSNTHGQLGHGDTLD--------RPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             HV+  G+N +GQL  GD  D        R  P  I  LE    V  +AAG  + +AVT
Sbjct: 286 DSHVYGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRLE---GVQHLAAGARHGVAVT 342

Query: 286 GNGVVYSFGSGSNFCLGHG 304
            +  V+++G+ S   LG+G
Sbjct: 343 ADD-VFTWGNNSEGQLGNG 360



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 24/175 (13%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G YH L I+ +++V S G +L G LG+    +  V    +++ +    ++  A  
Sbjct: 221 VKIDAGCYHALAITADNTVKSWGYNLYGQLGNSATKSSTVPVD-VDWLTDVSDIEAGAWH 279

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD---------TNR--PIFRPRLVEALKGVPCKQV 221
           N+A  +     V+  G+N        D         TNR  P+  PRL    +GV  + +
Sbjct: 280 NYA--MTSDSHVYGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRL----EGV--QHL 331

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            AG    G       V T G+N+ GQLG+G T+ R    S+  L+E  ++  + A
Sbjct: 332 AAGARH-GVAVTADDVFTWGNNSEGQLGNGTTVSR--FDSVKILQEGSAIKNVTA 383


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 306 TPVTVEKDRI 315



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 214 TIACGQMCCMAVV 226


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 277 TPVTVEKDRI 286



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V 
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 185 TIACGQMCCMAVV 197


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 15/268 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT  L+S+  V+S G    G LG+G   T     T +      HV+ V     
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNG---TWSARTTPVMAKGLNHVIDVHTGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
               +   G V+T G N +   G   T   +  P  V  L G+  K V+ GL +    L+
Sbjct: 94  STMALRSDGTVWTWGSNENGQLG-IGTVTDMNVPGQVSGLSGI--KAVSGGLGYHSMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G TL + TP  +A L +V +   IAAG  + LA+  +G V++
Sbjct: 151 EDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTA---IAAGGYFSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WGK   
Sbjct: 208 WGVNGDGELGDGTTTDRYVPVQVAGL----TDVMAIAAGGSHSLAVTQDGTVWAWGKNTY 263

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           G LG G   ++T P  + +L+  +AV G
Sbjct: 264 GTLGDGTRTNRTRPVQIKNLQHIVAVAG 291



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 29/269 (10%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA----AHVVQV 168
           + + TG   T+ L S+ +V++ GS+  G LG G       + T +N P      + +  V
Sbjct: 86  IDVHTGVRSTMALRSDGTVWTWGSNENGQLGIG-------TVTDMNVPGQVSGLSGIKAV 138

Query: 169 SASENHAAFVL-QSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAG 224
           S    + +  L + G V+T G N +   G+  T   N P+     V  L  V    + AG
Sbjct: 139 SGGLGYHSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPV----QVAGLNDV--TAIAAG 192

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             F+  L   G V   G N  G+LG G T DR  P  +A L +V   + IAAG S+ LAV
Sbjct: 193 GYFSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDV---MAIAAGGSHSLAV 249

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V+++G  +   LG G + +  +P  I+  +    H+V V+ G  H +ALD +G V
Sbjct: 250 TQDGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNLQ----HIVAVAGGGYHSLALDRTGNV 305

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           ++WG      LG G      +P P+S ++
Sbjct: 306 WSWGDNSQRQLGVGSNASSLIPVPVSGIE 334



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 71/247 (28%), Positives = 105/247 (42%), Gaps = 14/247 (5%)

Query: 121 YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH++ +S + SV++ G +  G LG+G    Q    T +       V  ++A    +  + 
Sbjct: 144 YHSMALSEDGSVWTWGKNDNGELGNGTTLQQN---TPVQVAGLNDVTAIAAGGYFSLALK 200

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+  G N     G   T    + P  V  L  V    + AG + +  +T  G V  
Sbjct: 201 SDGTVWAWGVNGDGELGD-GTTTDRYVPVQVAGLTDV--MAIAAGGSHSLAVTQDGTVWA 257

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G NT+G LG G   +R  P  I  L+ +   V +A G  + LA+   G V+S+G  S  
Sbjct: 258 WGKNTYGTLGDGTRTNRTRPVQIKNLQHI---VAVAGGGYHSLALDRTGNVWSWGDNSQR 314

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G     L P  +        HV  ++AG  H VA+   G V+ WG    G LG G 
Sbjct: 315 QLGVGSNASSLIPVPVSGIE----HVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT 370

Query: 360 EIDKTLP 366
              +  P
Sbjct: 371 SSTRDTP 377


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 128/268 (47%), Gaps = 15/268 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL---NHVIDIHSGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G T+ + +P  +A L +V +   IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTA---IAAGGYYSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGL----TDVMAIAAGGSHSLAIKQDGTVWAWGNNTY 263

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           G LG G    +T P  + +L+  +AV G
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQHIVAVAG 291



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 16/240 (6%)

Query: 121 YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH + +S N +V++ G +  G LG+G    Q    + +     + V  ++A   ++  + 
Sbjct: 144 YHGMALSENGTVWTWGKNDNGELGNGTTIQQN---SPVLVAGLSDVTAIAAGGYYSLALK 200

Query: 180 QSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             G V+  G N S   G    T+R +  P  V  L  V    + AG + +  +   G V 
Sbjct: 201 SDGTVWAWGVNGSGELGDGTTTDRHV--PVQVAGLTDV--MAIAAGGSHSLAIKQDGTVW 256

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G+NT+G LG G    R  P  +  L+ +   V +A G  + LAV   G V+S+G  S 
Sbjct: 257 AWGNNTYGTLGDGTRTHRTRPVQVRNLQHI---VAVAGGGYHSLAVDRAGNVWSWGDNSQ 313

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG       L P  +        HV  +SAG  H VA+   G V+ WG    G +G G
Sbjct: 314 QQLGLNSNASSLIPVPVPGIE----HVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDG 369


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 277 TPVTVEKDRI 286



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V 
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 185 TIACGQMCCMAVV 197


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTVEKDRI 310



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 209 TIACGQMCCMAVV 221


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG    LGHG ++  
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV 3246

Query: 364  TLPEPLSSLKS----HLAVQGLSVLA 385
              P+ +  L+     H+AV  L  LA
Sbjct: 3247 RKPQVVEGLRGKKIVHVAVGALHCLA 3272



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+VF+  CGD      GH DT  P+  P+++ AL G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDT-VPLEEPKMISALSGK 548

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV- 271
              +    +  G  ++  +T  G ++T G   +G+LGHG + D+  P  +  L+ +  + 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVID 608

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V   +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  G
Sbjct: 609 VSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRCG 666

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            +  VAL   G VY+WGKG    LGHG E     P+ L  L+    V
Sbjct: 667 SQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVV 713



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   VFS G    G LGHG       P+    +S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 753



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 5/199 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQ 379
              +  P+ +  L  H  +Q
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQ 3156



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++ +E     + ++G+V+    NS       DT      P+LV+ L      ++ A 
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS-------DT----LGPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 5/151 (3%)

Query: 210  VEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            VEAL+G     +   +G   T  LT    V + G   +G+LG G +     P  I  L  
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068

Query: 268  VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
            +G VV++  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ 
Sbjct: 4069 LG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIA 4125

Query: 328  VSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            ++ G  H V     G VYTWG    G LG G
Sbjct: 4126 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4156



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 36/179 (20%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVG------------------- 269
            G ++  G N  GQLG   G  +  PTP     ++ P++ +G                   
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 270  -SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              V+ IA  +G +  L +T +  V+S+G G    LG G       P  I +    G+ VV
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVV 4072

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            +V  G +  VAL  SG VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4125



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P  +++L G+   +V  G  F+  LT  G V+T G   + +LGHG       P+ +  L+
Sbjct: 4060 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4119

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                V+ IA G  + +  T +G VY++G      LG G  +   +PR +   + K I+  
Sbjct: 4120 G-KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-- 4176

Query: 327  RVSAGDEHVVALDSS 341
            RV+ G  H +A  +S
Sbjct: 4177 RVACGSAHTLAWSTS 4191



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4082

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4083 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4142 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 3175 VFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N HGQ G+
Sbjct: 3234 DYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3292

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3293 GTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + QIA      L ++ NG VY     S          D L P+ +Q    + I  +   +
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS----------DTLGPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQA 550


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 306 TPVTVEKDRI 315



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 214 TIACGQMCCMAVV 226


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 3/158 (1%)

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +E    +  +QV  GL     + +   V+T G  + GQLGHGD L R  P+ +  L+   
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKG-K 693

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           S+V+   G  + + V+ NG+V + G GSN CLGHG+     +PR I+      + V  +S
Sbjct: 694 SIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLL--SVDVRAIS 751

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            G  HVVA+ S G V+ WG+G  G LG GDE D   P+
Sbjct: 752 CGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQ 789



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 102/209 (48%), Gaps = 6/209 (2%)

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRP 207
           T  ++ T I  P+   + QV+    H   V     V+T G+ S    GH D   R   +P
Sbjct: 627 TCAMTLTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGR--SKP 684

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            +VEALKG    +   G  F+ F++  G V TCG  ++G LGHGD +    P+ I PL  
Sbjct: 685 EMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLS 744

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           V  V  I+ GP +++AV  +G V+++G G + CLG G++ D   P+ +Q    + + +  
Sbjct: 745 V-DVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQI--SEPVFIRE 801

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           V  G +  + L   G V   G      LG
Sbjct: 802 VKCGVDGTMFLTDMGSVLACGNNENNKLG 830



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 20/248 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
           +   +  N  V +CG    G LGHG   +   S  R+  P  +  V  +S   +H   V 
Sbjct: 704 FSVFVSDNGIVMTCGDGSNGCLGHGDWMS--ASRPRLIEPLLSVDVRAISCGPHHVVAVG 761

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G+VF  G     C G  D     F P+ V+  + V  ++V  G++ T FLT  G V  
Sbjct: 762 SDGEVFAWGRGKHGCLGLGD-EEDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGSVLA 820

Query: 240 CGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVGSVVQ---------IAAGPSYMLAV 284
           CG+N + +LG  H     R       K   P  +V +VV+         +A GP +   +
Sbjct: 821 CGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVL 880

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 343
              G VY+FG      LG G       P  ++        V  ++ GD    V ++S   
Sbjct: 881 VEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFTAVGINSENA 940

Query: 344 VYTWGKGY 351
           ++ WG  Y
Sbjct: 941 LFFWGTRY 948



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + Q+A G  +M+ V     VY++G GS   LGHG+     +P  ++    KG  +VR   
Sbjct: 643 IRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEAL--KGKSIVRACC 700

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSL 372
           GD   V +  +G V T G G  G LGHGD +  + P   EPL S+
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSV 745



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           I + +V+ G EH+V +     VYTWG+G  G LGHGD + ++ PE + +LK    V+ 
Sbjct: 641 IKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKSIVRA 698



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 97/258 (37%), Gaps = 28/258 (10%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I+ G +H + + S+  VF+ G    G LG G E     S   +       + +V    + 
Sbjct: 750  ISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDH-FSPQEVQISEPVFIREVKCGVDG 808

Query: 175  AAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFR-------------PRLVEALKGVPCK 219
              F+   G V  CG+N +   G  HR       +             P +V AL      
Sbjct: 809  TMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAI 868

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGP 278
             +  G + T  L   G V+T G N  GQLG G T  R  P  +  L     +V  +A G 
Sbjct: 869  DMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGD 928

Query: 279  SYM-LAVTGNGVVYSFGS---------GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             +  + +     ++ +G+          +N     G    E Q  A    RR   ++   
Sbjct: 929  MFTAVGINSENALFFWGTRYRPKDKPEENNNQSAEGAGAGEEQDHAPIGHRRNSSNISIT 988

Query: 329  SAGDEHVVALDSSGYVYT 346
            SAG  + +A++S  +  T
Sbjct: 989  SAGSVNNIAVESRAHTPT 1006


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 306 TPVTVEKDRI 315



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 123

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 182

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
               G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 226



 Score = 41.6 bits (96), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 63  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATT 121

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 122 EGEVFTWGHNAYSQLGNG 139


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 277 TPVTVEKDRI 286



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++    +  V 
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 380 GLSVLAEVCPTIV 392
            ++     C  +V
Sbjct: 185 TIACGQMCCMAVV 197


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 306 TPVTVEKDRI 315



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 123

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 182

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
               G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 226



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 63  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATT 121

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 122 EGEVFTWGHNAYSQLGNG 139


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 6/210 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4524

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4584

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4585 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4642

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG+      P+ +++L+
Sbjct: 4643 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQ 4672



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 22/285 (7%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3277 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3332

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3333 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3390

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 284
             +  +T  G ++T G   +G+LGHGD   +  PK +  L +   VVQ+A G   +  L +
Sbjct: 3391 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALAD-HRVVQVACGSRDAQTLCL 3449

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T  G+V+S+G G    LG G       P  ++  R  G+ V+++  G +  +AL  SG V
Sbjct: 3450 TEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVE--RLNGVGVMQIECGAQFSLALTKSGEV 3507

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLA 385
            +TWGKG    LGHG +     P P+  L+     H+AV  L  LA
Sbjct: 3508 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3552



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 116/257 (45%), Gaps = 21/257 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3337 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--------DIACG 3388

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+LV AL      QV  G     T 
Sbjct: 3389 SSHSAAITSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTALADHRVVQVACGSRDAQTL 3447

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P  +  L  VG V+QI  G  + LA+T +G 
Sbjct: 3448 CLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVG-VMQIECGAQFSLALTKSGE 3506

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG VY WG 
Sbjct: 3507 VWTWGKGDYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQVYAWGD 3564

Query: 350  GYCGALGHGDEIDKTLP 366
               G  G G+ I    P
Sbjct: 3565 NDHGQQGSGNTIVNKKP 3581



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 105/220 (47%), Gaps = 14/220 (6%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
             HG  +T   S   I  P+   V QV+ SE     +  +GQV +   ++   C   DT 
Sbjct: 563 FAHG--STSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN---CHTPDTT 617

Query: 202 RPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            P    + +E L+ V   Q+ A   G +    LT  G V + G+   G+LGHGDT  +  
Sbjct: 618 AP----KPIEGLESVNIVQLAAHCEGRHVLA-LTATGDVFSWGNGEGGRLGHGDTSSKDI 672

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P  I  L E   V  +  G SY  A+T  G +Y++G G+   LGHG   D+  P  +Q  
Sbjct: 673 PTRIVALAE-RQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVL 731

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           +++ +  V +  GD H + +  +G VY WG G  G LG+G
Sbjct: 732 KQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNG 771



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 123/279 (44%), Gaps = 20/279 (7%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   V+ ++  
Sbjct: 4469 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVIDIACG 4524

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +   G V T G       GH D+   + +P+LVEAL G     +  G      L
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDAQTL 4583

Query: 232  TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G 
Sbjct: 4584 CITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTRSGS 4642

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 4643 VYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDGGEVFTWGD 4700

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
               G LG G       P  + SL      QG  ++  +C
Sbjct: 4701 NDEGQLGDGTVSAIQRPRLVQSL------QGKHIVKVIC 4733



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------VQVSASENHAAFVLQSG 182
            S++F  G +  G LG        +  +RI  P+          +Q++  E     V   G
Sbjct: 4377 STIFGWGHNHRGQLGG-------LDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDG 4429

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTC 240
            +++  G  +    G   T+  +  P LVE+L+ V  K+V   +G      L+  G V + 
Sbjct: 4430 KLYATGYGAGGRLGIGGTDS-VTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSW 4488

Query: 241  GSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G    G+LGHG  D+ DRP  K I  L  +G V+ IA G ++   +T  G V ++G G  
Sbjct: 4489 GEGEDGKLGHGNRDSYDRP--KLIEALSGIG-VIDIACGSAHSACITSQGHVLTWGKGRY 4545

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LGHG+  D+LQP+ ++         +   +GD   + +     V++WG G  G LG G
Sbjct: 4546 GRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4605

Query: 359  DEIDKTLPEPLSSL 372
                  +P  + SL
Sbjct: 4606 GSDGCKVPMKIESL 4619



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 4379 IFGWGHNHRGQLGGLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4437

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4438 AGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            HG +    +P+ I+     GI V+ ++ G  H   + S G+V TWGKG  G LGHGD  D
Sbjct: 4498 HGNRDSYDRPKLIEAL--SGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4555

Query: 363  KTLPEPLSSLKSHLAV 378
            +  P+ + +L  + A+
Sbjct: 4556 QLQPKLVEALLGYRAI 4571



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 91/192 (47%), Gaps = 15/192 (7%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG-SNTHGQL 248
           N+  C  H  T+R  +    +E   GV  +QV         LT  G V +   SN H   
Sbjct: 558 NNVACFAHGSTSR--YSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSNCH--- 612

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
               T D   PK I  LE V ++VQ+AA     ++LA+T  G V+S+G+G    LGHG+ 
Sbjct: 613 ----TPDTTAPKPIEGLESV-NIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDT 667

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             +  P  I     +   V  V  G  +  A+ ++G +YTWG+G  G LGHG+  DK LP
Sbjct: 668 SSKDIPTRIVALAER--QVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLP 725

Query: 367 EPLSSLKSHLAV 378
             +  LK    +
Sbjct: 726 TIVQVLKQQRVI 737



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA--SENHAAFVLQS 181
           +L +   V S   S C    H P+TT   +   I    + ++VQ++A     H   +  +
Sbjct: 596 ILTTTGQVLSLQHSNC----HTPDTT---APKPIEGLESVNIVQLAAHCEGRHVLALTAT 648

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G VF+ G+      GH DT+      R+V AL       V  G +++  +T  G ++T G
Sbjct: 649 GDVFSWGNGEGGRLGHGDTSSKDIPTRIV-ALAERQVTGVFCGSSYSAAITAAGELYTWG 707

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LGHG++ D+  P  +  L++   + V +  G ++ L VT  G+VY++G G    
Sbjct: 708 RGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGK 767

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           LG+G  +    P AI+   +     V+V +G    VAL   G VY+W
Sbjct: 768 LGNGTCNGSSVPVAIE-LPQCSDGAVKVFSGSHFSVALGRDGTVYSW 813



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L +   VFS G+   G LGHG  +++ +  TRI   +   V  V    +++A +
Sbjct: 639 GRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP-TRIVALAERQVTGVFCGSSYSAAI 697

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 236
             +G+++T G  +    GH ++      P +V+ LK      V  G      L  T  G 
Sbjct: 698 TAAGELYTWGRGTYGRLGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  G    G+LG+G       P +I   +     V++ +G  + +A+  +G VYS+G G
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               LGHG       P+AIQ    +G ++V ++ G  H +AL +SG +Y WG+
Sbjct: 817 HGGRLGHGHSEHTASPKAIQAL--EGKNIVDLAVGLAHCLALTASGELYGWGR 867



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +Y+ G
Sbjct: 3243 VLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKLYACG 3299

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G  G 
Sbjct: 3300 EGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 3359

Query: 355  LGHGDEIDKTLPEPLSSLKS 374
            LGHG+ +    P+ + +L++
Sbjct: 3360 LGHGNRLTLEKPKLIETLRT 3379



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C    ++   +   V+Q+      +  + +SG+V+T G  
Sbjct: 3455 VFSWGDGDFGKLGRG-GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKG 3513

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              +  GH  T++ + +P  ++ L+G     V  G      +T  G V+  G N HGQ G 
Sbjct: 3514 DYYRLGH-GTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGS 3572

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G+T+    P  +  L+ +  V ++A G S+ +A
Sbjct: 3573 GNTIVNKKPSLVLGLDGI-FVNRVACGSSHSVA 3604


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 135/277 (48%), Gaps = 8/277 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           ++ +    +V   A N+  ++ G  HTL +++   VF+ G    G LG       C+   
Sbjct: 70  KARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSI-VEDCLRVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R +   S  H+ QV+    H+  + + G++F+ G N     G       +  P+++++L+
Sbjct: 129 RTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQ 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  Q++AG   +  LT+ G +   G N  GQLG GD  DR  P  +  L     VV I
Sbjct: 189 GIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRS-QQVVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH   + E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSVVSQIACGRQH 305

Query: 335 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            +A + SSG + ++G G  G LG     ++  P P+ 
Sbjct: 306 TLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPVK 342



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R  F     V  V     H  F+L+ G V+TCG N     GH    +   +P  V +L  
Sbjct: 27  RCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK---KPEQVVSLDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V   G  + GQLG     D    P+++  L EV  + Q+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEV-HITQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA+   G ++S+G      LG G+Q   +  P+ IQ+   +GI   ++SAG  
Sbjct: 143 ACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSL--QGIPFGQISAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG GD  D+  P  L +L+S   V
Sbjct: 201 HSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVV 245



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 18/268 (6%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASE 172
           GR HT+ L+ + +V++CG +  G LGH      PE  Q VS        A ++V VS  E
Sbjct: 42  GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKKPE--QVVSL------DAQNIVAVSCGE 93

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQVF  G  S    G       +  PR V++L  V   QV  G   +  L 
Sbjct: 94  AHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA 153

Query: 233 IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G + + G N +GQLG G       +P+ I  L+ +    QI+AG ++   +T +G ++
Sbjct: 154 RGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGI-PFGQISAGGAHSFGLTLSGAIF 212

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      LG G+  D   P  ++T R +   VV +  G++H  AL   G V+T+G G 
Sbjct: 213 GWGRNKFGQLGLGDNDDRRFPVLLKTLRSQ--QVVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            G LGH     +  P  +  L   +  Q
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSVVSQ 298



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  E  +G   + V  G   T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  LLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKA--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V ++ G ++ LA+   G V+++G GS+  LG     D L+ PR +++     
Sbjct: 80  SL-DAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSE-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           +H+ +V+ G  H +AL   G +++WG+   G LG G +
Sbjct: 137 VHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQ 174


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 10/287 (3%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +QS+     +V     +++   G  H   IS S ++++ G +  G LGHG  T    + T
Sbjct: 84  VQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG-STNPITTPT 142

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALK 214
           +I   ++ HVV+V+ S  H   +   G ++  G N     G  D  +R +  P  +    
Sbjct: 143 KIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHV--PVPLTYFN 200

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--APLEEVGSVV 272
             P   V  G + T      G V   G N HGQLG G TLD     S+  APL+ +  V 
Sbjct: 201 SRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSL-VVP 259

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +A G  + +A+  +G VYSFG      LGHG +H   +P  I+   +   H V+V+ G 
Sbjct: 260 SLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKT--HAVQVTCGC 317

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            H + L   G VY +G+   G LG G+ ID T P+ ++SL+    V+
Sbjct: 318 YHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVK 364



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 12/248 (4%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +S G +  G L H     + +  T I+F     ++ V+      AF+ ++G VFTCG N 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLP-TPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 192 SFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           S  CG   T+R +   RLV AL  + +   +   G      ++  G ++T G N+ GQLG
Sbjct: 73  SGQCGIGSTSR-VQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG T    TP  I  L     VV++A    + + +T  G +Y+FG      LG  +  D 
Sbjct: 132 HGSTNPITTPTKIKDLASY-HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDR 190

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-----KT 364
             P  +  F  +   V+ V+ G  H V   ++G V  +GK   G LG G  +D       
Sbjct: 191 HVPVPLTYFNSRP--VLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSL 248

Query: 365 LPEPLSSL 372
           L  PL SL
Sbjct: 249 LAAPLDSL 256



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 8/193 (4%)

Query: 185 FTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++ G NS     H DT +R +  P  +     V    V  G   T FL   G V TCG N
Sbjct: 14  YSFGQNSYGELCHNDTVDRTL--PTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYN 71

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             GQ G G T  R     + P      +  I  A G  ++ A++ +G +Y+FG  S   L
Sbjct: 72  DSGQCGIGST-SRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQL 130

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG  +    P  I+       HVV V+    H + +   G +Y +G+   G LG  D +
Sbjct: 131 GHGSTNPITTPTKIKDL--ASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGM 188

Query: 362 DKTLPEPLSSLKS 374
           D+ +P PL+   S
Sbjct: 189 DRHVPVPLTYFNS 201



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           ++ G N++G+L H DT+DR  P  I+    V  ++ +A G      +   G V++ G   
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNV-KILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +   G G        R +     + I  +R + G EH+ A+  SG +YT+G    G LGH
Sbjct: 73  SGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGH 132

Query: 358 GDEIDKTLPEPLSSLKSHLAVQ 379
           G     T P  +  L S+  V+
Sbjct: 133 GSTNPITTPTKIKDLASYHVVE 154



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 6/196 (3%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSAS 171
           + +  G++HT++ ++N  V + G +  G LG G       S + +  P  + VV  ++  
Sbjct: 205 LAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACG 264

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G V++ G N     GH   +  +  P L++AL      QVT G   T  L
Sbjct: 265 YYHTIALAEHGSVYSFGRNDYGQLGHGHRHH-LSEPTLIKALAKTHAVQVTCGCYHTLVL 323

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGV 289
           +  G V+  G N HGQLG G+ +D  +P+ IA L +   VV++A+G   S  L  T N V
Sbjct: 324 SEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRD-KFVVKVASGFYHSICLTATKNSV 382

Query: 290 VYSFGSGSNFCLGHGE 305
                +    C   G+
Sbjct: 383 GSRMDTSHTLCQDLGK 398


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 16/259 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 289
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 290 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 348 GKGYCGALGHGDEIDKTLP 366
           G G  G LGHG   ++ +P
Sbjct: 271 GAGNYGQLGHGASNNEMIP 289



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 9/249 (3%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH    D      I       +VVQIA G ++ LA+T  G +YS+  GSN     G Q  
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSW--GSNIYGQLGVQSP 176

Query: 309 ELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           +  P +    R     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAY 236

Query: 366 PEPLSSLKS 374
           P  L S+++
Sbjct: 237 PSQLKSMRT 245



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++    + S G + CG +GH  +         + F  +  VVQ++   
Sbjct: 89  IQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN 148

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVPCKQVTAGLN 226
           NH+  +   G++++ G N     G +       +N P+   RL   L G+P   +  G N
Sbjct: 149 NHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIPLATIACGGN 204

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G  Y + +T 
Sbjct: 205 HSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVY 345
            G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +AL  S G VY
Sbjct: 264 EGGVFTCGAGNYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 346 TWGKGYCGALGHGDEIDKTLPE 367
           ++G G  G LG  + I +TLP+
Sbjct: 322 SFGLGASGQLGTRNTISQTLPK 343



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGASNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            G V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 301 TPVTVEKDRI 310



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
               G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 221



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 58  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATT 116

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 117 EGEVFTWGHNAYSQLGNG 134


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 90/305 (29%), Positives = 144/305 (47%), Gaps = 26/305 (8%)

Query: 107  VET--SAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
            VET  S+  + I+ G  H++ +  S  ++S GSS  G LGHG  T Q +     +F    
Sbjct: 1080 VETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQ 1139

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVE-----ALKGVP 217
             V+ ++    H   + +SG +FT G N S   G  +  NR +  P  +E      + G  
Sbjct: 1140 KVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAV--PMRIETSEIVGIHGER 1197

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
               + AG + +      G +++ G+N+ GQLGHG+      PK I  L+    +++I+ G
Sbjct: 1198 ITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKG-KPIIKISCG 1256

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              + +A++    VY +G G + CLG+G   +EL P+ I+ F  K I   +V  G  H   
Sbjct: 1257 HFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIE--KVVCGLYHTAT 1314

Query: 338  LDSS------GYVYTWGKGYCGALGHGDEI-----DKTLPEPLSSLKSHLAVQGLSVLAE 386
            + ++      G VY  G G  G LG G ++     DK  P  + SL S + + G S  +E
Sbjct: 1315 VTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNS-MNIVGFSSGSE 1373

Query: 387  VCPTI 391
                I
Sbjct: 1374 FSAII 1378



 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 10/269 (3%)

Query: 106  IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAA 163
            +V+     + +  G  H  +IS +  +F+ G++  G LGHG    +  S  R +    ++
Sbjct: 1027 LVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSS 1086

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVT 222
             ++ +S    H+  V QS Q+++ G +     GH     P   P+ +E    G     + 
Sbjct: 1087 PIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGH-GVLTPQNLPKKIEDFTGGQKVLAIA 1145

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGP 278
             G   T  L   G + T G N  GQLG G+  +R  P  I   E VG     +  IAAG 
Sbjct: 1146 TGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGH 1205

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            S+ +    NG +YS+G+ S   LGHG     L+P+ I     KG  ++++S G  H VA+
Sbjct: 1206 SHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDEL--KGKPIIKISCGHFHTVAI 1263

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
                 VY WG+G    LG+G   ++  P+
Sbjct: 1264 SELNSVYCWGQGEHMCLGNGSNKNELSPK 1292



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 6/213 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V V+    H A +   G++FT G+NS    GH  +  +    PR VE  K  P   ++ G
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               +  +     +++ GS+ +GQLGHG    +  PK I        V+ IA G ++ + +
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSS 341
              +G +++FG   +  LG G   +   P  I+T    GIH   +  ++AG  H +    +
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214

Query: 342  GYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLK 373
            G +Y+WG    G LGHG+ I+K+L P+ +  LK
Sbjct: 1215 GDIYSWGANSKGQLGHGN-IEKSLRPKQIDELK 1246



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 20/273 (7%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF----TRINFPSAAHVVQV 168
            + I TG  HT+++  S  +F+ G +  G LG G    + V      + I       +  +
Sbjct: 1142 LAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAI 1201

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +A  +H+   L +G +++ G NS    GH +  + + RP+ ++ LKG P  +++ G   T
Sbjct: 1202 AAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSL-RPKQIDELKGKPIIKISCGHFHT 1260

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-- 286
              ++    V+  G   H  LG+G   +  +PK I        + ++  G  +   VT   
Sbjct: 1261 VAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFIN-KKIEKVVCGLYHTATVTAAE 1319

Query: 287  ----NGVVYSFGSGSNFCLGHGEQ-----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                 G VY  G G +  LG G        D+  P  I +     +++V  S+G E    
Sbjct: 1320 NGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSL--NSMNIVGFSSGSEFSAI 1377

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            + ++G +YTWG G  G +G+G   D  LP  +S
Sbjct: 1378 ITNNGALYTWGYGNFGQIGNGKTEDMWLPTKIS 1410



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 252  DTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
            D L  P P    PL +     V +A G  ++  ++ +G ++++G+ S   LGHG    + 
Sbjct: 1018 DLLLNPMP----PLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKY 1073

Query: 311  Q--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            Q  PR ++TF+   I  + +S G EH VA+D S  +Y+WG    G LGHG    + LP+ 
Sbjct: 1074 QSTPRRVETFKSSPI--IMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKK 1131

Query: 369  L 369
            +
Sbjct: 1132 I 1132


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 134/275 (48%), Gaps = 12/275 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEA 212
            R I   S   +VQV+    H+  + ++ +VF+ G N     G   D N+    P+L+++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQA-SPQLIKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+S+G      LG G + + +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSL--TGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VFS G +  G LG G +  +  S   I   +    +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 8/219 (3%)

Query: 164 HVVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            V++++A     H   + +  +V++ G+      GH DT+     P L++ALKG     V
Sbjct: 514 EVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKE-EPTLIQALKGKDIIDV 572

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY- 280
             G  ++  ++  G ++T G   +G+LGHG   D  TP  I+ L +   ++++A G  Y 
Sbjct: 573 ECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSD-EHIIKVACGSFYA 631

Query: 281 -MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             L +T  G VYS+G G    LG G       PR I+  + + + +V+V  G +  VAL 
Sbjct: 632 HTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE--KLQNVKIVQVYCGAQFSVALS 689

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G+VYTWGKG    LGH  E +   PE +  L+    V
Sbjct: 690 EDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVV 728



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 7/262 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G VY WGK     + 
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758

Query: 357 HGDEIDKTLPEPLSSLKSHLAV 378
              E+    P  + +LK    V
Sbjct: 759 DSSELFVQQPRLIEALKGQKVV 780



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 29/254 (11%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF  G     + G GP+    +S   I         Q+  S+     + Q+G+VF    +
Sbjct: 448 VFGWGW-FSWIFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYS 498

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQ 247
           S   C           P+ + AL      ++ A   G ++   LT    V++ G+   G+
Sbjct: 499 SDTQC-----------PQEMTALDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGR 546

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHGDT  +  P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   
Sbjct: 547 LGHGDTSTKEEPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAE 605

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           D L P  I     +  H+++V+ G    H + + S G VY+WG G  G LG G      L
Sbjct: 606 DCLTPTMISALSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKL 663

Query: 366 PEPLSSLKSHLAVQ 379
           P  +  L++   VQ
Sbjct: 664 PRLIEKLQNVKIVQ 677


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 67  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 125

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 126 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 185

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 186 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 245

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 246 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 303

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 304 TPVTVEKDRI 313



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 63  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 121

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 122 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 180

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
               G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 181 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 224



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 61  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATT 119

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 120 EGEVFTWGHNAYSQLGNG 137


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 8/222 (3%)

Query: 161 SAAHVVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           S  ++++++A     H   + +  +V++ G+      GH DT+     P L++ALKG   
Sbjct: 511 SGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDI 569

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             V  G  ++  ++  G ++T G   +G+LGHG   D  TP  I+ L +   ++++A G 
Sbjct: 570 IDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSD-EHIIKVACGS 628

Query: 279 SY--MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            Y   L +T  G VYS+G G    LG G       PR I+    + + +V+V  G +  V
Sbjct: 629 FYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKL--QNVKIVQVYCGAQFSV 686

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           AL   G+VYTWGKG    LGH  E +   PE +  L+    V
Sbjct: 687 ALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVV 728



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2990 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 3041

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 3042 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 3100

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 3101 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 3159

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 3160 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 3217

Query: 350  GYCGALGHGDEIDKTLP 366
               G  G+G  I    P
Sbjct: 3218 NDHGQQGNGTTIVNRKP 3234



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 7/262 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G VY WGK     + 
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758

Query: 357 HGDEIDKTLPEPLSSLKSHLAV 378
              E+    P  + +LK    V
Sbjct: 759 DSSELFVQQPRLIEALKGQKVV 780



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 16/276 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S ++ V+S G    G LGHG     C + 
Sbjct: 3948 LLESIQH------VFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETP 4000

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       ++ ++    H+A +  +GQ++T G       GH D+   + +P+L+E L 
Sbjct: 4001 KLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELV 4059

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G      L I    +V + G   +G+LG G +     PK I  L  +G V+
Sbjct: 4060 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VI 4118

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G 
Sbjct: 4119 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGS 4176

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             H VA    G V+TWG    G L  GD+    +  P
Sbjct: 4177 LHCVACSDEGEVFTWGDNDEGQL--GDDTTNAIQRP 4210



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 215
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2922 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2978

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2979 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 3037

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 331
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 3038 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 3095

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ
Sbjct: 3096 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQ 3143



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 10/212 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAG 224
            + V++   H   +     V++ G+      GH   NR     P+L+EAL+G     +  G
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKLIEALQGYEIIDIACG 4017

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYM 281
               +  +T  G ++T G   +G+LGHGD+ D+  PK I  L  VG  V+ +A  +G +  
Sbjct: 4018 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL--VGYKVIDVACGSGDAQT 4075

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L +T +  V+S+G G    LG G       P+ I++    G+ V++V  G +  VAL  S
Sbjct: 4076 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGLGVIKVECGSQFSVALTRS 4133

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G VYTWGKG    LGHG       P+ +++L+
Sbjct: 4134 GSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQ 4165



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 28/244 (11%)

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           + G GP+    +S   I         Q+  S+     + Q+G+VF    +S   C     
Sbjct: 457 IFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYSSDTQC----- 503

Query: 201 NRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
                 P+ +  L G+   ++ A   G ++   LT    V++ G+   G+LGHGDT  + 
Sbjct: 504 ------PQEMTGLSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKE 556

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
            P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   D L P  I  
Sbjct: 557 EPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA 615

Query: 318 FRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              +  H+++V+ G    H + + S G VY+WG G  G LG G      LP  +  L++ 
Sbjct: 616 LSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV 673

Query: 376 LAVQ 379
             VQ
Sbjct: 674 KIVQ 677



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 10/230 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S    VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3901 STLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKK 3959

Query: 221  --VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
              V +G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G 
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGG 4018

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +
Sbjct: 4019 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 4078

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
                 V++WG G  G LG G      +P+ + SL       GL V+   C
Sbjct: 4079 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLA------GLGVIKVEC 4122



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 7/144 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3925

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3926 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3985

Query: 352  CGALGHGDEIDKTLPEPLSSLKSH 375
             G LGHG+ +    P+ + +L+ +
Sbjct: 3986 DGKLGHGNRLACETPKLIEALQGY 4009



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +A  VVQ+      +  + ++G+V
Sbjct: 3102 LTDEGWVFSWGDGDFGKLGRGG-SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEV 3160

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  +++ + +P ++E+LK      V  G      +T  G V+  G N 
Sbjct: 3161 WTWGKGDYFRLGH-GSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDND 3219

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T+    P  +  LE+V  + ++A G S+ +A T
Sbjct: 3220 HGQQGNGTTIVNRKPALVHGLEDV-HINRVACGSSHSIAWT 3259



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASENHAAFV 178
            ++   L  + SV++ G      LGHG  T + V    ++       ++ ++    H    
Sbjct: 4125 QFSVALTRSGSVYTWGKGDYHRLGHG--TGEHVRRPKKVAALQGKKIISIATGSLHCVAC 4182

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
               G+VFT GDN     G  DT   I RPRLV AL+G     V  G
Sbjct: 4183 SDEGEVFTWGDNDEGQLGD-DTTNAIQRPRLVSALQGKKITNVACG 4227


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 18/213 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTM 347

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G   H  G LGHG  +    PK IA PLE +  +  +A GP +   +T  G +
Sbjct: 348 AGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGL-QIAFVACGPWHTALITSTGQL 406

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSGTSI 464

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SSG ++TWG G    LGHGD+  +  P  +S+L
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVSAL 497



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +H+  ++ +  +++ G  +   G+LGHG   +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT--- 228
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T   
Sbjct: 394 PWHTALITSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 229 --------GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                   G     G + T G     +LGHGD   R  P  ++ L +  +  +IA G S 
Sbjct: 453 VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDY-NFHKIACGHSL 511

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG      ++    +   +  G  +  ++ G  HV  L S
Sbjct: 512 TVGLTTSGRVFTMGSTVYGQLGSSLSDGKVP--CLVGDKIAGESIEEIACGAYHVAVLTS 569

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALK 602



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 160
           +  G +HT LI S   +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALITSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVW 447

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
             A VV+V A+  H+   + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSGTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVSALIDYNFHK 504

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G + T  LT  G V T GS  +GQLG   + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLS-DGKVPCLVGDKIAGESIEEIACGAYH 563

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAI 619



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 10/187 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   +   P+ + 
Sbjct: 266 VLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVE 325

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L    ++  +A G  +  AVT  G +Y++G G +    LGHG       P+ I     +
Sbjct: 326 ALIST-TIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRI-AGPLE 383

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G+ +  V+ G  H   + S+G ++T+G G  G LGHGD  + + P  + SL       GL
Sbjct: 384 GLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESL------LGL 437

Query: 382 SVLAEVC 388
             +A  C
Sbjct: 438 RTIAVAC 444


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M    G ++  L    +V++ G    G LGHG    + +    +  P    +V VSA  
Sbjct: 138 QMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP-RLLEGPWKDRIVHVSAGG 196

Query: 173 NHAAFVLQSGQVFTCG-DNSSFCCGHRDTN----RPIFRPRLVEALKGVPCKQVTAGLNF 227
           +H A V +SG+++T G D      GH + +      + RP  V+AL  VP   V  G  F
Sbjct: 197 SHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIALVYCGGFF 255

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G + + G N + +LGHG   +   PK +A LE+V ++VQ+A G  +  A+T +
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDV-TLVQVACGGFHAAALTQD 314

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V ++G G N  LGHG   +  +P  ++    K      ++ G     A+  +G +YTW
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADK--TCTYIACGPAWTAAITENGDLYTW 372

Query: 348 GKGYCGALG----HGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           GK     LG      +++D  L +   +L     V+ L V
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGV 412



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 18/255 (7%)

Query: 112 GNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           GN+ +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA 
Sbjct: 87  GNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAG 143

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G V+T G  +    GH    R +  PRL+E         V+AG + T  +
Sbjct: 144 GLHNIALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHTAAV 202

Query: 232 TIRGHVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T  G ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIALVYCGGFFTMA 258

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G 
Sbjct: 259 LTKSGQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGK 316

Query: 344 VYTWGKGYCGALGHG 358
           V TWG G  G LGHG
Sbjct: 317 VITWGYGGNGQLGHG 331



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 12/164 (7%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTE 204

Query: 341 SGYVYTWGKGYC-GALGHG-----DEIDKTLPEPLSSLKSHLAV 378
           SG +YTWG+    G LGHG     DE   + P  + +L   +A+
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIAL 248



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 59/151 (39%), Gaps = 20/151 (13%)

Query: 236 HVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV---- 289
            V   G  THGQ+GHG  DT   P   S   L     +  I         +   GV    
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 290 ----------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                     V+ +G G    LG   + ++ +P      +R    V   SAG  H +AL 
Sbjct: 96  FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR----VQMASAGGLHNIALT 151

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
             G VYTWG G  GALGHG    + LP  L 
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLE 182


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 318 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 376

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 377 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 435

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 436 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 494

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 340
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 495 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 551

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 552 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 584



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 17/224 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 263 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 322 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 381 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 438

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                    S  ++TWG G    LGHGD+  K +P  + +L  H
Sbjct: 439 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 482



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 8/199 (4%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 232 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 287

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 300
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 288 ELGGRLGHGTDTDICRPKLVESLA-VSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 346

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 347 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 405

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
                P+ + +L    A++
Sbjct: 406 ESVAYPKEVEALSGFRAMK 424



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 22/232 (9%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L +S+  +F+ G    G LGHG    + V++ + +   S    ++V+  
Sbjct: 371 LSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR--ESVAYPKEVEALSGFRAMKVACG 428

Query: 172 ENHAAFVLQ-SGQ---------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A +++ SGQ         +FT GD      GH D    +  P  V+AL      QV
Sbjct: 429 VWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLV-PTCVQALVDHNFHQV 487

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPS 279
             G + T  L   GHV T GS+ +GQLG+    D   P  +   +++G+  V +I+ G +
Sbjct: 488 ACGHSMTVALATSGHVFTMGSSNNGQLGNPKA-DGKQPCMVQ--DKLGNELVEEISCGSN 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++ A+T    VY++G G+N  LGHG   D+ +P  +   + +  HV  +S G
Sbjct: 545 HVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR--HVKSISCG 594



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 11/129 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V QIA G  ++   T  G V+++G      LGHG   D  +P+ +++    
Sbjct: 254 PLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVS 313

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +  +  + G+ H   + +SG +Y WG G    G LGHG  +   LP+ +S       ++
Sbjct: 314 NVEYI--ACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-----PLE 366

Query: 380 GLSVLAEVC 388
           GL VL+  C
Sbjct: 367 GLQVLSVAC 375


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 123/264 (46%), Gaps = 8/264 (3%)

Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
            + + +G  H L L S   V+S G +  G LGHG   + C     I       VV V+A 
Sbjct: 109 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 167

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +  G     T 
Sbjct: 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTL 226

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 227 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGA 285

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGD 343

Query: 350 GYCGALGHGDEIDKTLPEPLSSLK 373
              G LG G       P  +++L+
Sbjct: 344 NDEGQLGDGTTNAIQRPRLVAALQ 367



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 168

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH-RVVDIACGSGDAQTLC 227

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 285

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 321



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 5/258 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           ++GR +     + +++  G +  G LG G E  +    T     +    VQ+   E    
Sbjct: 8   SSGRENLYFQGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLF 66

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIR 234
            V   G+++  G  +    G   T   +  P L+E+++ V  K+V   +G      L+  
Sbjct: 67  AVTADGKLYATGYGAGGRLGIGGTE-SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V++ G    G+LGHG+      P+ I  L  +  VV +AAG ++   VT  G +Y++G
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWG 184

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGH +  D+L+P+ ++  +   +  +   +GD   + L     V++WG G  G 
Sbjct: 185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 244

Query: 355 LGHGDEIDKTLPEPLSSL 372
           LG G      +P  + SL
Sbjct: 245 LGRGGSDGCKVPMKIDSL 262



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 11/152 (7%)

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
           L F G  TI G  H    N  GQLG   G  +  PTP +++A L  V    Q+  G   +
Sbjct: 14  LYFQGSGTIYGWGH----NHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTL 65

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            AVT +G +Y+ G G+   LG G       P  +++ +   I  V V++G +H +AL S 
Sbjct: 66  FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G VY+WG+   G LGHG+      P  + SL+
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR 157



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 4/172 (2%)

Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++   +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V   
Sbjct: 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG-SDGCKVPMKIDSLTGLGVVKVECG 273

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +  + +SG V+T G       GH  ++  + RPR V+ L+G     +  G       
Sbjct: 274 SQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC 332

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T  G V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 333 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK-KVNRVACGSAHTLA 383


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 128/273 (46%), Gaps = 23/273 (8%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +  G YH+L +++N +V + G +  G LG G    +      +  P+   VV ++A
Sbjct: 396 GVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAP---VVVPALTGVVSLTA 452

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRL--VEALKGVPCKQVTAGL 225
             +H+  +L  G V   G+N+S   G   TN+   P+    L  V AL G       A  
Sbjct: 453 GYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALA-- 510

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                L   G V   G N +GQLG G T +R TP +++ L  V   V IAAG  Y LA+ 
Sbjct: 511 -----LLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTNV---VAIAAGGDYSLALQ 562

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            NG V S+G G    LG         P+A+        +VV ++AG  HV+AL + G VY
Sbjct: 563 SNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGV----TNVVAIAAGANHVLALRADGTVY 618

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG+   G LG G  + +  P  +  L + +A+
Sbjct: 619 AWGRNDFGQLGDGTTVQRNTPVQVPGLTNVVAI 651



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 123/277 (44%), Gaps = 16/277 (5%)

Query: 106 IVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V +  G   I  G  H+L ++++ +V + G +  G LG G  T +    T +  P    
Sbjct: 240 LVSSLTGVTAIAAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRA---TPVAVPGLTG 296

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTA 223
           V ++SA   H+  +L  G     G N S   G    +NR    P LV +L GV    ++A
Sbjct: 297 VTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNR--TSPVLVSSLTGVTA--LSA 352

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  L   G     G+N  GQLG G T  R  P  +  L     V  +AAG  + LA
Sbjct: 353 GGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLT---GVAALAAGGYHSLA 409

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V  NG V ++G  +   LG G       P  +         VV ++AG +H +AL S G 
Sbjct: 410 VLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPAL----TGVVSLTAGYDHSLALLSDGT 465

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           V  WG    G LG G    +  P  +S L + +A+ G
Sbjct: 466 VRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSG 502



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 117/254 (46%), Gaps = 13/254 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G Y   L+ + +V + G++  G LG G  T    S   +  P  + VV ++A  NHA  +
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDG-TTPHRASPGAV--PGLSGVVAIAAGNNHALAL 160

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           L  G V   G N+    G   T +    P  V  L GV    + AG N +  +   G V 
Sbjct: 161 LSDGTVRAWGYNAYGQLGDGTTTQ-RRTPVAVLGLTGVVA--IAAGENHSLAVLADGTVR 217

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G+NT+G+LG G T  R +P  ++ L     V  IAAG ++ LAV  +G V ++G  ++
Sbjct: 218 AWGNNTYGRLGDGTTTQRTSPVLVSSLT---GVTAIAAGANHSLAVLADGTVRAWGYNAS 274

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG G       P A+         V  +SAG  H +AL + G    WG    G LG G
Sbjct: 275 GRLGDGTTTQRATPVAVPGL----TGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDG 330

Query: 359 DEIDKTLPEPLSSL 372
              ++T P  +SSL
Sbjct: 331 TVSNRTSPVLVSSL 344



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 21/231 (9%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQ 220
             V++++ + H+      G V   GDN+S   G   T +   P   P L  A+       
Sbjct: 46  RAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAGAVA------ 99

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG  ++  L   G V   G+NT+GQLG G T  R +P ++  L     VV IAAG ++
Sbjct: 100 VSAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLS---GVVAIAAGNNH 156

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+  +G V ++G  +   LG G       P A+         VV ++AG+ H +A+ +
Sbjct: 157 ALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGL----TGVVAIAAGENHSLAVLA 212

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG-----LSVLAE 386
            G V  WG    G LG G    +T P  +SSL    A+       L+VLA+
Sbjct: 213 DGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLAD 263



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 25/270 (9%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +++V  S G +      YH L L+S+ +V + G ++ G LG G  + +   +T +     
Sbjct: 495 TNVVALSGGKL------YHALALLSDGTVRAWGYNMNGQLGDGSTSNR---WTPVAVSGL 545

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQV 221
            +VV ++A  +++  +  +G V + G       G   DT  P   P+ V  +  V    +
Sbjct: 546 TNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPT--PKAVPGVTNVVA--I 601

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG N    L   G V+  G N  GQLG G T+ R TP  +  L  V   V IA G  + 
Sbjct: 602 AAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNV---VAIATGWDHS 658

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA+  +G VY++G      LG G   +  Q P  +        +VV V+AG    +AL S
Sbjct: 659 LALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGL----TNVVAVTAGGNQSLALLS 714

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           SG V+ WG    G LG+G  +  T P P++
Sbjct: 715 SGAVHAWGDNSHGELGNGSTL--TPPAPVA 742



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H L L ++ +V++ G +  G LG G   T     T +  P   +VV ++   
Sbjct: 599 VAIAAGANHVLALRADGTVYAWGRNDFGQLGDG---TTVQRNTPVQVPGLTNVVAIATGW 655

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G V+  G N +   G   T      P  V  L  V    VTAG N +  L 
Sbjct: 656 DHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVA--VTAGGNQSLALL 713

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
             G VH  G N+HG+LG+G TL  P P ++  L
Sbjct: 714 SSGAVHAWGDNSHGELGNGSTLTPPAPVAVTGL 746


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 332 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 390

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 391 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 449

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 450 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 508

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 340
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 509 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 565

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 566 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 598



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 17/224 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 277 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 335

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 336 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 394

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 395 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 452

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                    S  ++TWG G    LGHGD+  K +P  + +L  H
Sbjct: 453 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 496



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 8/199 (4%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 246 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 301

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 300
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 302 ELGGRLGHGTDTDICRPKLVESLA-VSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 360

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 361 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 419

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
                P+ + +L    A++
Sbjct: 420 ESVAYPKEVEALSGFRAMK 438



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 22/232 (9%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L +S+  +F+ G    G LGHG    + V++ + +   S    ++V+  
Sbjct: 385 LSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR--ESVAYPKEVEALSGFRAMKVACG 442

Query: 172 ENHAAFVLQ-SGQ---------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A +++ SGQ         +FT GD      GH D    +  P  V+AL      QV
Sbjct: 443 VWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLV-PTCVQALVDHNFHQV 501

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPS 279
             G + T  L   GHV T GS+ +GQLG+    D   P  +   +++G+  V +I+ G +
Sbjct: 502 ACGHSMTVALATSGHVFTMGSSNNGQLGNPKA-DGKQPCMVQ--DKLGNELVEEISCGSN 558

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++ A+T    VY++G G+N  LGHG   D+ +P  +   + +  HV  +S G
Sbjct: 559 HVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR--HVKSISCG 608



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 11/129 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V QIA G  ++   T  G V+++G      LGHG   D  +P+ +++    
Sbjct: 268 PLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVS 327

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +  +  + G+ H   + +SG +Y WG G    G LGHG  +   LP+ +S       ++
Sbjct: 328 NVEYI--ACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-----PLE 380

Query: 380 GLSVLAEVC 388
           GL VL+  C
Sbjct: 381 GLQVLSVAC 389


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 109/220 (49%), Gaps = 16/220 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 288 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 346

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 347 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 405

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 406 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 463

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                  SSG ++TWG G    LGHGD   K  P  + SL
Sbjct: 464 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSL 503



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 22/273 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 343 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSAVSCG 401

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  T 
Sbjct: 402 TWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGVWHTA 458

Query: 230 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +         T  G + T G     +LGHGD   +  P  +  L +  +  +   G + 
Sbjct: 459 AVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVCGHTL 517

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V  G  HV  L  
Sbjct: 518 TIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVVCGAYHVAVLTQ 575

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           SG VYTWGKG  G LGHGD  D+  P  + +L+
Sbjct: 576 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALR 608



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 15/227 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++S  +++ G    GVLGHG   T  +S+ + +        + VS    
Sbjct: 398 VSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVW 455

Query: 174 HAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           H A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G
Sbjct: 456 HTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAVCG 514

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  GH+ T GS+ +GQLG+ +  D   P+ +      G VV++  G  ++  +
Sbjct: 515 HTLTIGLTTSGHIFTAGSSVYGQLGNPNN-DGRYPRLVEEKLGGGGVVEVVCGAYHVAVL 573

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           T +G VY++G G+N  LGHG+  D   P  ++  R + +  +   +G
Sbjct: 574 TQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSG 620



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 4/172 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 274 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 333

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 334 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 391

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK
Sbjct: 392 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLK 443



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   +  V  +A G  +   VT    V+++G   +  LGHG      QPR +++    
Sbjct: 279 PLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESL--S 336

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             +V  ++ G+ H  A+ ++G +YTWG G    G LGHG  +   +P+ +S       ++
Sbjct: 337 ICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-----PLE 391

Query: 380 GLSVLAEVCPT 390
           GL V A  C T
Sbjct: 392 GLQVSAVSCGT 402


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +   S  S  H       G++FT
Sbjct: 134 NDEIFVLGTNCCGCLGLG-DIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFT 192

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 193 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 252

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G  
Sbjct: 253 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSS 312

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 313 GNQSTPCRIAAL--QGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYP 370

Query: 367 EPLSSLKSHL 376
            P++  K  +
Sbjct: 371 TPVAVEKDRI 380



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 3/138 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  +     +GP  +LA T  G
Sbjct: 130 YSTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATT-EG 188

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 189 EIFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 247

Query: 349 KGYCGALGHGDEIDKTLP 366
               G +G G   ++ +P
Sbjct: 248 YNNSGQVGSGSTANQPIP 265


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 282 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 340

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
             H+A  + SG++FT GD +    GH D     + P+ VEAL G    +V  G+ +    
Sbjct: 341 SWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAY-PKEVEALSGFRAMKVACGVWHSAAI 399

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 458

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 340
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 459 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 515

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 516 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 548



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G  
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACGEF 287

Query: 227 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
            T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHSAL 346

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
              +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+     
Sbjct: 347 TMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEISG 404

Query: 339 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                  S  ++TWG G    LGHGD+  K +P  + +L  H
Sbjct: 405 QASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 446



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 22/232 (9%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L +S+  +F+ G    G LGHG    + V++ + +   S    ++V+  
Sbjct: 335 LSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR--ESVAYPKEVEALSGFRAMKVACG 392

Query: 172 ENHAAFVLQ-SGQ---------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A +++ SGQ         +FT GD      GH D    +  P  V+AL      QV
Sbjct: 393 VWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLV-PTCVQALVDHNFHQV 451

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPS 279
             G + T  L   GHV T GS+ +GQLG+    D   P  +   +++G+  V +I+ G +
Sbjct: 452 ACGHSMTVALATSGHVFTMGSSNNGQLGNPKA-DGKQPCMVQ--DKLGNELVEEISCGSN 508

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++ A+T    VY++G G+N  LGHG   D+ +P  +   + +  HV  +S G
Sbjct: 509 HVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR--HVKSISCG 558



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 4/163 (2%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           +Q+  G    G  T +G V T G    G+LGHG   D   PK +  L  V +V  IA G 
Sbjct: 228 EQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLA-VSNVEYIACGE 286

Query: 279 SYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +   VT +G +Y +G GS     LGHG       P+ + +   +G+ V+ V+ G  H  
Sbjct: 287 FHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSA 345

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              SSG ++T+G G  G+LGHGD      P+ + +L    A++
Sbjct: 346 LTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMK 388



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 13/130 (10%)

Query: 265 LEEVGSVV----QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +E +G V     QIA G  ++   T  G V+++G      LGHG   D  +P+ +++   
Sbjct: 217 IESLGDVYVWGEQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAV 276

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             +  +  + G+ H   + +SG +Y WG G    G LGHG  +   LP+ +S       +
Sbjct: 277 SNVEYI--ACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-----PL 329

Query: 379 QGLSVLAEVC 388
           +GL VL+  C
Sbjct: 330 EGLQVLSVAC 339


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 81  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 139

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 140 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 199

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +  +VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 200 QVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSG 259

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 260 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 317

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 318 TPVIVEKDRI 327



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 73  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHVV-L 130

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 131 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 190

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR + T   +   VV ++ G    +A+  +G VY WG  
Sbjct: 191 FAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYN 249

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 250 GNGQLGLGSGGNQPTPCRIAALQ 272



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 6/167 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ V   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 49  PIFSLCSEEELQLVRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 107

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 108 RLDSLSGKKIACLSYGSGPHVVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 165

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                V+ V+ G  H + L S G V+ WG    G +G G   ++ +P
Sbjct: 166 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIP 212


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3921 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3974

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVE L+G
Sbjct: 3975 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQG 4033

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4034 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4092

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4093 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4150

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4151 HCVCCTEDGEVYTWGDNDEGQLGDG 4175



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3933 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3991

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3992 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDIACGSGDAQTLC 4050

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4051 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4108

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            VYTWGKG    LGHG +     P  +  L      QG  V+A
Sbjct: 4109 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL------QGKKVIA 4144



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +      
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQ----GG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 22/226 (9%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-LPLEEPKVISAFSG- 547

Query: 217 PCKQ-------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             KQ       +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ + 
Sbjct: 548 --KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL- 604

Query: 270 SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
            V+ +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + V++
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVIK 662

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 6/221 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S+  +++  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 2940 SSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2997

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  AL
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3115

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +Q
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 3156



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +AL   G V++WG G  G LG G      +P+ +  L
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 12/223 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 3014 VYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3073 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
                   P+ I+  R  G  V ++  G +  +AL  SG V+TW
Sbjct: 3190 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3919 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3978

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3979 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4037

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +   +GD   + L     V++WG G  G LG G      +P  + SL
Sbjct: 4038 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4085



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPI----QLIGGEQTLFAVTADGKLY 3898

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3899 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3958

Query: 352  CGALGHGDEIDKTLPEPLSSLK 373
             G LGHG+      P  + SL+
Sbjct: 3959 DGKLGHGNRSPCDRPRVIESLR 3980



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4043 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4101

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4102 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4160

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4161 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4206



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 776


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 4/253 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N+ VF+ G++  G LG G +T   V   R++      +  +S  S  H       G+
Sbjct: 37  VTENNEVFALGTNCSGCLGVG-DTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGE 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 96  VYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYN 155

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++  P+ +    +    V IA G    +AV  NG VY +G   N  LG 
Sbjct: 156 NSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 215

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   ++  P  I     +GI V RV+ G  H + L   G +Y WG    G LG G+  ++
Sbjct: 216 GNSGNQPTPCRIAAL--QGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQ 273

Query: 364 TLPEPLSSLKSHL 376
           + P P++  K  +
Sbjct: 274 SYPVPITVDKDRV 286



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF  R  E LK +   C   +AG N   ++T    V   G+N  G LG GDT +   P+
Sbjct: 8   PIFAFRSPEELKLIRQACVFGSAG-NEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPR 66

Query: 261 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  ++A T  G VY++G  +   LG+G  ++ L P  I T  
Sbjct: 67  RLDTLCGKKITCLSYGSGPHVVVA-TAEGEVYTWGHNAYSQLGNGTTNNSLLPCQIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
                V  V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S L++ +AV
Sbjct: 125 LVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAV 184


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 11/250 (4%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ +RI +   + V Q++    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH     P  RP  +  L+     Q+  G   +  L+  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118

Query: 249 GHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH    D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG    +
Sbjct: 119 GHASDQDIVKLPKIVRNLVS-KTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPN 177

Query: 308 DELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           D  Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++ 
Sbjct: 178 DLQQSNTPMRLTTLL--GIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 365 LPEPLSSLKS 374
            P  L +L++
Sbjct: 236 YPTQLKTLRT 245



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 14/264 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---QDYVITQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTC 156

Query: 234 RGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D     TP  +  L  +  V  IA G ++   ++ +  V
Sbjct: 157 CGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGI-PVSAIACGGNHSFLISKSSAV 215

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L   G V+T G
Sbjct: 216 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTIEGGVFTCG 271

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
            G  G LGHG   ++ LP  +  L
Sbjct: 272 AGAYGQLGHGFSSNEMLPRMVMEL 295



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 10/195 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L     ++S GS+L G LG   P +  Q  +  R+       V  ++ 
Sbjct: 142 VQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIAC 201

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +S  VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 202 GGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 259

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLTI G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 260 FLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSR 317

Query: 288 GVVYSFGSGSNFCLG 302
           G +Y FG GS+  LG
Sbjct: 318 GRIYGFGLGSSGQLG 332



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTIEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQLV 345


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 11/248 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G    + +   R ++F  A++V Q++  EN+   + + G+V++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH    +   R +L+  L     +++  G   T  +   G + + G N +GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLG 117

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
               D  +R  P+ I  L     +VQIA G  + +A+T +G +Y++GS     LG G   
Sbjct: 118 LNSVDCTER-VPRMIKVLG-TNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYT 175

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             E++P+ I T     + +  ++ G  H + +  SG V++WG+   G LG  D   + LP
Sbjct: 176 TTEIKPKRISTL--AAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLP 233

Query: 367 EPLSSLKS 374
             L +L++
Sbjct: 234 CQLRTLRN 241



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 7/256 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +I  G  HTL ++    +FS G ++ G LG +  + T+ V    I       +VQ++   
Sbjct: 88  KIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVP-RMIKVLGTNVIVQIACGT 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G+++  G N     G         +P+ +  L  VP   +  G   T  ++
Sbjct: 147 EHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVIS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G NT GQLG  D   R  P  +  L     V     G  + + +T +G V++
Sbjct: 207 KSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRN-AKVCYATCGEEFSVFLTMDGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGY 351
            G+G    LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G 
Sbjct: 266 CGAGMYGQLGHGNTTNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323

Query: 352 CGALGHGDEIDKTLPE 367
            G LG+      T P+
Sbjct: 324 AGQLGNRASQSATTPQ 339



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 8/235 (3%)

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLCGVL 142
           CN N +  L  +   E    +++    N+  QI  G  H++ ++N   +++ GS+  G L
Sbjct: 110 CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQL 169

Query: 143 GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
           G G  TT  +   RI+  +A  +  ++    H   + +SG VF+ G N+    G  D  +
Sbjct: 170 GLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQ 229

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
               P  +  L+       T G  F+ FLT+ G V TCG+  +GQLGHG+T +   P+ +
Sbjct: 230 RNL-PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQV 288

Query: 263 APLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             +E +GS V QI+ G  + LA V   G VY++G G    LG+        P+ +
Sbjct: 289 --MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 11/278 (3%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D +E S    QI  G  +T+ I+    V+SCG++  G LGH     +      ++    A
Sbjct: 29  DFIEASNVE-QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIPGLD----A 83

Query: 164 HVVQVSASEN-HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            V +  A  N H   V + GQ+F+ G N +   G    +     PR+++ L      Q+ 
Sbjct: 84  FVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIA 143

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  LT  G ++  GSN  GQLG G  T     PK I+ L  V  +  IA G  + 
Sbjct: 144 CGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAV-PIAFIACGGYHT 202

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + ++ +G V+S+G  +   LG  +      P  ++T R     V   + G+E  V L   
Sbjct: 203 IVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNA--KVCYATCGEEFSVFLTMD 260

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G V+T G G  G LGHG+  ++ LP  +  L      Q
Sbjct: 261 GGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQ 298


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
 gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
          Length = 1878

 Score =  101 bits (252), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 39/284 (13%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ---- 180
           L +   +++ G +   VLG G E  +     ++NF SA  V QVS   +H A +++    
Sbjct: 55  LKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISE 114

Query: 181 -SGQVFTCGDNSSFCCGH-------------RDTNRPIFRPRLVEALKGVPC-------- 218
            SG+V+T G       G+              D N   + P        VPC        
Sbjct: 115 ASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTP--------VPCIVNFPFNA 166

Query: 219 --KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
              +++ G N +  L+  G V   G   +G LG G+  D  +P  I        V+ IAA
Sbjct: 167 KISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAA 226

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + L    +G V+++GS SN  LG G  +  +  P  I++  +   H+  V+AG+ H 
Sbjct: 227 GARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ--YHITLVAAGESHS 284

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             +DS GY+YTWG G  G LGHG + D  +P  +  + S   VQ
Sbjct: 285 GCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQ 328



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 18/224 (8%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +NFP  A + ++S   NH+  +  SG VF  G     C G  + N  ++ P  +EA  G 
Sbjct: 160 VNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELN-DVYSPVKIEA--GP 216

Query: 217 PCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV 272
             K+V    AG   +      G V   GSN++G+LG G +    T P  I  L +   + 
Sbjct: 217 TDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQY-HIT 275

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +AAG S+   +   G +Y++G+G +  LGHG Q D   PR I+      +  V+++ G 
Sbjct: 276 LVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGI--SSLPFVQLTLGA 333

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            + +AL  SG VY W     GA  H  EI  +LP  + +  SH+
Sbjct: 334 FNSMALSQSGEVYIW-----GAKQH--EI-ISLPTKIDAFDSHI 369



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 30/241 (12%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKG 215
           V Q++   +H   ++  G +F  GDN     G  DT R           F     E    
Sbjct: 490 VRQIACGTSHTLLLVYGGTIFAWGDNKYGQLG-VDTRRRKSQNGDKNESFLNEPTEIKFS 548

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            P ++V  G   +    I+G+  + G    GQLG G   +   P  I  L+   +V+++A
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK---NVIEVA 605

Query: 276 AGPSYMLAV-----TGNGVVYSFGSGSNFCLGHGEQH-----DELQPRAIQTFRRK--GI 323
            G  Y   +     TGN  + +  SG  +  G G+       D +    I   R    G 
Sbjct: 606 GGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT 665

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            +++V+ G  H + L +SG + TWG GY G LG       + P     +K    ++G+ +
Sbjct: 666 PIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNP-----IKIRFPIKGVQI 720

Query: 384 L 384
           +
Sbjct: 721 V 721



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 34/262 (12%)

Query: 115 QITTGRYHTLL-ISNSSVFSCGSSLCGVLG------HGPETTQCVSF----TRINFPSAA 163
           QI  G  HTLL +   ++F+ G +  G LG            +  SF    T I F    
Sbjct: 492 QIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEP- 550

Query: 164 HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            + +V+    H+      G  F+ G  D      G     R ++ P  +  LK V   +V
Sbjct: 551 -IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTG---AIRNLYEPAGIVTLKNV--IEV 604

Query: 222 TAGLNFTGFL------------TIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
             G  ++  +            TI  G +   G    G+LG GD + +    +   L   
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLG 664

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             ++++A G S+ L +T +G + ++G+G    LG         P  I+ F  KG+ +V +
Sbjct: 665 TPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-FPIKGVQIVDI 723

Query: 329 SAGDEHVVALDSSGYVYTWGKG 350
           + G  H +A+ S G ++ WGK 
Sbjct: 724 AVGSYHSMAVSSLGDLWVWGKA 745


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++A
Sbjct: 37  NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G + +  L++ G++++ G N  GQLG G T D+  P  I  LE    V  +A G S+   
Sbjct: 97  GKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALEN-QKVEFLACGGSHTAL 155

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-G 342
           +T +G+V++FG+G    LGH    +EL+P  +   +  G  V +V+ G +H +A  S  G
Sbjct: 156 LTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVT--KLAGNRVTQVACGRQHTLAYVSDLG 213

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            V+++G G  G LG+G   ++ +P P+ 
Sbjct: 214 KVFSFGSGEEGQLGNGGTHNQLIPLPMK 241



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 5/254 (1%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G       +   
Sbjct: 23  SIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQI 82

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   + Q+SA ++H+  +  SG +++ G N     G   T+   F P L+EAL+  
Sbjct: 83  VEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDF-PSLIEALENQ 141

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + +  G + T  LT  G V T G+  +GQLGH  T +   P  +  L     V Q+A 
Sbjct: 142 KVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAG-NRVTQVAC 200

Query: 277 GPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA V+  G V+SFGSG    LG+G  H++L P  ++    + +     ++  E +
Sbjct: 201 GRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELKFENRTSEKELI 260

Query: 336 VALDSSGYVYTWGK 349
           +    +  +  W K
Sbjct: 261 IIAGGNQSILLWIK 274


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 105/230 (45%), Gaps = 9/230 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 375 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 434 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 493

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 306
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 494 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 551

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            D   P+ ++    +   +V V+ G  H + +  SG  + +GK   G LG
Sbjct: 552 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLG 599



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQI--TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 446 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 503

Query: 157 INFPSAAHVVQ-VSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDT-NRPIFRPRLVE 211
           I       +V+ VS S  H     + G +   +T G N     GH D+ +R I  P+ VE
Sbjct: 504 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 561

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL       V  G   T  +T+ G     G N +GQLG     ++  P  +    E    
Sbjct: 562 ALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQEC 621

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFRR----K 321
           ++I  G  + +A+     +++FG      LG G  +       +LQ +     R     +
Sbjct: 622 LEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELE 681

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G  +VR++ G  H +A+  +G +Y +G+   G LG GD  ++  P P+   
Sbjct: 682 GKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDF 732



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 92/200 (46%), Gaps = 8/200 (4%)

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFER--IQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 491

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHG 358
           GHG    E  P+ I++   K + +  VS    H V     G    +YT+G+   G LGH 
Sbjct: 492 GHGNTTSESVPKIIRSLENKIVRL--VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN 549

Query: 359 DEIDKTLPEPLSSLKSHLAV 378
           D ID+ +P+ + +L     V
Sbjct: 550 DSIDRKIPQFVEALSDQQIV 569


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 126/268 (47%), Gaps = 15/268 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLN---HVIDIHSGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G T  + +P  +A L +V     IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDV---TAIAAGGYYSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G   +   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGL----TDVMAIAAGGSHSLAIRQDGTVWAWGNNTY 263

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           G LG G    +T P  + +L+  +AV G
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQHIVAVAG 291



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 16/240 (6%)

Query: 121 YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH + +S N +V++ G +  G LG+G  T Q    + +     + V  ++A   ++  + 
Sbjct: 144 YHGMALSENGTVWTWGKNDNGELGNGTTTQQN---SPVLVAGLSDVTAIAAGGYYSLALK 200

Query: 180 QSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             G V+  G N S   G    T R +  P  V  L  V    + AG + +  +   G V 
Sbjct: 201 SDGTVWAWGVNGSGELGDGTTTERHV--PVQVAGLTDVMA--IAAGGSHSLAIRQDGTVW 256

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G+NT+G LG G    R  P  +  L+ +   V +A G  + LAV   G V+S+G  S 
Sbjct: 257 AWGNNTYGTLGDGTRTHRTRPVQVRNLQHI---VAVAGGGYHSLAVDQAGNVWSWGDNSQ 313

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG       L P  +        HV  +SAG  H VA+   G V+ WG    G LG G
Sbjct: 314 QQLGLSSNASSLIPVPVTGIE----HVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDG 369


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 277 TPVVVEKDRI 286



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR ++ L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDCLSGKKIACLSYGSGPHVV-L 89

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVDTGEVYVWGYN 208

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +S+L+
Sbjct: 209 GNGQLGLGSSGNQPTPCRVSALQ 231



 Score = 41.6 bits (96), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           S A L+ +       +  + +L  T N  ++  G+    CLG G+    ++PR +     
Sbjct: 14  SEAELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSG 73

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           K I  +   +G  HVV   + G V+TWG      LG+G
Sbjct: 74  KKIACLSYGSG-PHVVLATTEGEVFTWGHNAYSQLGNG 110


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 20/269 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHV 165
           G  ++  G  H+L L+ + SV++CGS+ CG LGH      PE    +   +I+       
Sbjct: 35  GLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKIS------- 87

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V + GQVF  G       G       +  PRL++ L      QV  G 
Sbjct: 88  -GVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGN 146

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLA 283
           +    L+  G +   G N+ GQLG G     P+  S  PL+ +  +   QI+AG  +  A
Sbjct: 147 HHCIALSKDGQLFVWGENSSGQLGLGK--GEPSTLSPQPLKSLCGIPLTQISAGGDHSFA 204

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           ++ +G V+ +G  S   LG  ++ D   P  I+  R +   VV +S G+EH  AL   G 
Sbjct: 205 LSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ--KVVYISCGEEHTAALTKEGG 262

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           ++T+G G  G LGH    ++ LP  +  L
Sbjct: 263 LFTFGNGSKGQLGHDSTRNEPLPRRVMEL 291



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ G+ H+L ++    VF+ G+   G LG G    + V   R+      H + QV    +
Sbjct: 89  VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG-TAEEAVRVPRLIKKLCEHRISQVMCGNH 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+F  G+NSS   G          P+ +++L G+P  Q++AG + +  L+ 
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  I  L     VV I+ G  +  A+T  G +++F
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS-QKVVYISCGEEHTAALTKEGGLFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+GS   LGH    +E  PR +      G  V +++ G  H +A + S+G +Y +G    
Sbjct: 267 GNGSKGQLGHDSTRNEPLPRRVMELM--GTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQ 324

Query: 353 GALGHGDEIDKTLPEPLSSLK 373
           G LG G       P P+S+++
Sbjct: 325 GQLGTGIRGSAKSPVPVSNIQ 345



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 8/214 (3%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +V+    H+ F+L  G V+TCG NS   CG    ++   RP LV AL       V+ G  
Sbjct: 38  EVACGNQHSLFLLHDGSVYTCGSNS---CGQLGHDKGGSRPELVGALDAQKISGVSCGQA 94

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  +  +G V   G+   GQLG G   +    P+ I  L E   + Q+  G  + +A++
Sbjct: 95  HSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE-HRISQVMCGNHHCIALS 153

Query: 286 GNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G ++ +G  S+  LG G+ +   L P+ +++    GI + ++SAG +H  AL  SG V
Sbjct: 154 KDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSL--CGIPLTQISAGGDHSFALSFSGAV 211

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + WGK   G LG  DE D+ +P  +  L+S   V
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVV 245


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A   S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGSTSNRKSPFPVK 342



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L  ++  Q
Sbjct: 278 STGHEINPRKVFELMGNIVTQ 298



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R NF     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   RP  V AL       V+ G   T  L  +G V+  G    GQLG   T
Sbjct: 65  QLGHEKSRK---RPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGT 121

Query: 254 LDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++    V+S+G   +  LG G +   +  
Sbjct: 122 EEYTRVPRNIKSLSDV-QIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +++AG  H  AL  SG V+ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 17/271 (6%)

Query: 116 ITTGRYHTLLIS---NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  +S   N   +  G+   G+LGHG E +  +  +   F     VV V+   
Sbjct: 148 VACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGS 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT---- 228
            H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G+  T    
Sbjct: 208 WHSALATSNGKLFTFGDGTFGVLGHGD-QESVMYPKEVQLLSGLKTVKVACGVWHTAAII 266

Query: 229 ------GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                 G       + T G     +LGHG+      P  ++PL E  +  QIA G +  +
Sbjct: 267 EVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEY-NFQQIACGHTMTV 325

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V++ GS  N  LG+     ++ P  +Q  +  G  +  +S G  HV A+ S  
Sbjct: 326 ALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQD-KLLGEFIEEISCGAHHVAAVTSRS 383

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +YTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 384 ELYTWGKGSNGRLGHGDTDDRKSPTLVLALK 414



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 15/211 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+VFT G+ S    GH   ++   +P LVE    V    V  G   T  ++ 
Sbjct: 102 HLAIVSREGKVFTWGEESGGRLGH-GIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSK 160

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             +  T G  TH  G LGHG+ +    PKS+    +   VV +A G  +    T NG ++
Sbjct: 161 CDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHSALATSNGKLF 220

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSS 341
           +FG G+   LGHG+Q   + P+ +Q     G+  V+V+ G  H  A+           SS
Sbjct: 221 TFGDGTFGVLGHGDQESVMYPKEVQLL--SGLKTVKVACGVWHTAAIIEVAFQSGSNASS 278

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             ++TWG G    LGHG++     P  +S L
Sbjct: 279 WKLFTWGDGDKFRLGHGNKDMYLKPTRVSPL 309



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 7/176 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PRL+E+   +  + + +G +    ++  G V T G  + G+LGHG   D   P  + 
Sbjct: 79  VLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPH-LV 137

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
              +V ++  +A G  +  AV+     +++G G++    LGHG +     P+++  F   
Sbjct: 138 EFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGF-LD 196

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP---LSSLKS 374
           G+ VV V+ G  H     S+G ++T+G G  G LGHGD+     P+    LS LK+
Sbjct: 197 GLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKT 252



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 96/254 (37%), Gaps = 72/254 (28%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   S    V+V+  
Sbjct: 201 VSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQ--ESVMYPKEVQLLSGLKTVKVACG 258

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQ 220
             H A +++          S ++FT GD   F  GH   N+ ++ +P  V  L     +Q
Sbjct: 259 VWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGH--GNKDMYLKPTRVSPLIEYNFQQ 316

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLG------------------------------- 249
           +  G   T  LT  GHV T GS  +GQLG                               
Sbjct: 317 IACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAHHV 376

Query: 250 ---------------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
                                HGDT DR +P  +  L++   +  I+ G ++   V    
Sbjct: 377 AAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKD-RHLKNISCGSNFTSCVCNQK 435

Query: 289 VVYSFGSGSNFCLG 302
             Y  G+  + C G
Sbjct: 436 --YVSGTDQSVCFG 447


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 16/259 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 289
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 290 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 348 GKGYCGALGHGDEIDKTLP 366
           G G  G LGHG   ++ +P
Sbjct: 271 GAGNYGQLGHGVSNNEMIP 289



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 9/249 (3%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH    D      I       +VVQIA G ++ LA+T  G +YS+  GSN     G Q  
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSW--GSNIYGQLGVQSP 176

Query: 309 ELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           +  P +    R     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAY 236

Query: 366 PEPLSSLKS 374
           P  L S+++
Sbjct: 237 PSQLKSMRT 245



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++    + S G + CG +GH  +         + F  +  VVQ++   
Sbjct: 89  IQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN 148

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVPCKQVTAGLN 226
           NH+  +   G++++ G N     G +       +N P+   RL   L G+P   +  G N
Sbjct: 149 NHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIPLATIACGGN 204

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G  Y + +T 
Sbjct: 205 HSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVY 345
            G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +AL  S G VY
Sbjct: 264 EGGVFTCGAGNYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 346 TWGKGYCGALGHGDEIDKTLPE 367
           ++G G  G LG  + I +TLP+
Sbjct: 322 SFGLGASGQLGTRNTISQTLPK 343



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGVSNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            G V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 109/220 (49%), Gaps = 16/220 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 263 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 322 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 381 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 438

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                  SSG ++TWG G    LGHGD   K  P  + SL
Sbjct: 439 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSL 478



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 130/273 (47%), Gaps = 22/273 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 318 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSAVSCG 376

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  T 
Sbjct: 377 TWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGVWHTA 433

Query: 230 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +         T  G + T G     +LGHGD   +  P  +  L +  +  +   G + 
Sbjct: 434 AVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVCGHTL 492

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L  
Sbjct: 493 TIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVACGAYHVAVLTQ 550

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           SG VYTWGKG  G LGHGD  D+  P  + +L+
Sbjct: 551 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALR 583



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 15/227 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++S  +++ G    GVLGHG   T  +S+ + +        + VS    
Sbjct: 373 VSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVW 430

Query: 174 HAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           H A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G
Sbjct: 431 HTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAVCG 489

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  GH+ T GS+ +GQLG+ +  D   P+ +      G VV++A G  ++  +
Sbjct: 490 HTLTIGLTTSGHIFTAGSSVYGQLGNPNN-DGRYPRLVEEKLGGGGVVEVACGAYHVAVL 548

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           T +G VY++G G+N  LGHG+  D   P  ++  R + +  +   +G
Sbjct: 549 TQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSG 595



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 4/172 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 249 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 308

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 309 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 366

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK
Sbjct: 367 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLK 418



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   +  V  +A G  +   VT    V+++G   +  LGHG      QPR +++    
Sbjct: 254 PLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSI- 312

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             +V  ++ G+ H  A+ ++G +YTWG G    G LGHG  +   +P+ +S       ++
Sbjct: 313 -CNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-----PLE 366

Query: 380 GLSVLAEVCPT 390
           GL V A  C T
Sbjct: 367 GLQVSAVSCGT 377



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 122 HTL---LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           HTL   L ++  +F+ GSS+ G LG+     +              VV+V+    H A +
Sbjct: 490 HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKL-GGGGVVEVACGAYHVAVL 548

Query: 179 LQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            QSG+V+T G  ++   GH D  +R    P  VEAL+    K++  G  FT  +
Sbjct: 549 TQSGEVYTWGKGANGRLGHGDIADRKT--PTFVEALRDRSVKRIACGSGFTAAI 600


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A   S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGSTSNRKSPFPVK 342



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L  ++  Q
Sbjct: 278 STGHEINPRKVFELMGNIVTQ 298



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R NF     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   RP  V AL       V+ G   T  L  +G V+  G    GQLG   T
Sbjct: 65  QLGHEKSRK---RPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGT 121

Query: 254 LDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++    V+S+G   +  LG G +   +  
Sbjct: 122 EEYTRVPRNIKSLSDV-QIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +++AG  H  AL  SG V+ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 79  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 136

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 137 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 196

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 197 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 255

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 256 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 313

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 314 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 347



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 53  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 109

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 110 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 169

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 228

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 229 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 286

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 287 STSHEINPRKVFELMGSIVTQ 307



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 9/252 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S+   G++  G LG G    + V    R +F     V  V     H  FVL  G V+TCG
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH  + +   +P  V AL       V  G   T  L  +G V+  G ++ GQL
Sbjct: 69  CNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125

Query: 249 G-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQ 306
           G  G       P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G + 
Sbjct: 126 GLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 184

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P
Sbjct: 185 QKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 242

Query: 367 EPLSSLKSHLAV 378
             L SL+S   V
Sbjct: 243 NLLKSLRSQKIV 254



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 149 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 208

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 209 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 267

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 268 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 325

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 326 YSFGLGGNGQLGTGSTSNRKSPFTVK 351


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 18/217 (8%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T
Sbjct: 282 KHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT 340

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G 
Sbjct: 341 MTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQ 399

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 338
           +++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+           
Sbjct: 400 LFTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTHSSSS 457

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            SSG ++TWG G    LGHGD+  +  P  +S+L  H
Sbjct: 458 VSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDH 494



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     +  VS  
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 387

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +F PR VE+L G+    V  G+     +
Sbjct: 388 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 446

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  ++ L +  +  ++A G S 
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALID-HTFHRVACGHSL 505

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKDC-VEEIACGAYHVAVLTS 563

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALK 596



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 384 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 441

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           HAA +++           SG++FT GD      GH D   P  +P  V AL      +V 
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD-KEPRLKPTCVSALIDHTFHRVA 500

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 501 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCVEEIACGAYHVA 559

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    V+++G G+N  LGHG+  D   P  +   + +  HV  ++ G     A+
Sbjct: 560 VLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKER--HVKNIACGSNFTAAI 613



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 10/195 (5%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           G+  +   +  P+ +E+   +    +  G+     ++ +G V T G  + G+LGHG   D
Sbjct: 252 GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPR 313
              P+ I  L    S+  +A G  +  AVT  G +Y++G G++    LGHG       P+
Sbjct: 312 VTGPQLIESLAAT-SIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPK 370

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     P  + SL 
Sbjct: 371 RI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESL- 428

Query: 374 SHLAVQGLSVLAEVC 388
                 GL  +A  C
Sbjct: 429 -----SGLRTIAVAC 438



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 290 VYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           V  FG+  N  +G+ G + D L P+ +++     +H   ++ G +H   +   G V+TWG
Sbjct: 242 VTKFGADKN--IGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAALVSRQGEVFTWG 297

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
           +   G LGHG   D T P+ + SL
Sbjct: 298 EASGGRLGHGMGKDVTGPQLIESL 321


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 18/207 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG+ +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   PR +++    G+  +  + G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDRENVAYPREVESL--SGLRTIAAACGVWHTAAVVEVIVTQSSSSI 466

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG ++TWG G    LGHGD+  +  P
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKP 493



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 124/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D     + PR VE+L G+       G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAY-PREVESLSGLRTIAAACGVWHTAAV 454

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSL 513

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+     +L P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFAMGSTVYGQLGNPYADGKL-PCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKAPILVEALK 604



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+ S   +F+ G    GVLGHG    + V++ R +   S    +  +    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--ENVAYPREVESLSGLRTIAAACGVW 449

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV   GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDR--HVKYIACGANYTAAI 621



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 7/200 (3%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 374
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRT 441

Query: 375 HLAVQGLSVLAEVCPTIVQE 394
             A  G+   A V   IV +
Sbjct: 442 IAAACGVWHTAAVVEVIVTQ 461


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 14/222 (6%)

Query: 159  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGV 216
             P AA   +++A +NHA  +   G V++ G NS      G   T     RP+ + A+  V
Sbjct: 1032 LPPAA---KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV 1088

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
                +  G + +  +   G + + G N +GQLG GD   + TP+ +     + +V  IAA
Sbjct: 1089 AA--IACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV---NAISNVAAIAA 1143

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  Y LA+T +G V+S+G  S+  LG G+  D   P+ ++       +V  ++AG++H +
Sbjct: 1144 GEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS----NVAAIAAGEDHSL 1199

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AL   G V++WG+   G LG  D  D+  P+P++++ +  A+
Sbjct: 1200 ALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAI 1241



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 80/273 (29%), Positives = 133/273 (48%), Gaps = 27/273 (9%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           S E+    +   +    I  G  H+L L  + S +S G +  G LG G   ++     ++
Sbjct: 585 STENRPQKINAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTP-RKV 643

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEA 212
           N  + ++VV ++A + H+  +   G +++ GDN+    G     HR+T      PR V A
Sbjct: 644 N--ALSNVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNT------PRKVNA 695

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +  V    + AG   +  LT  G V + G+NT GQLG GD  DR TP+   P+  + ++ 
Sbjct: 696 ISNVVA--IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQ---PVTTISNIK 750

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVS 329
            IA G +Y +A++  G+V+++G   +  LG   HG   DE  P+ +        +VV +S
Sbjct: 751 AIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVIS----NVVGLS 806

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           AG  H +AL   G ++ WG    G +   + I+
Sbjct: 807 AGSSHSIALTEDGALWAWGNNEAGQIAAEEAIE 839



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 76/245 (31%), Positives = 117/245 (47%), Gaps = 11/245 (4%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +I  G  H L L  + SV+S G +  G LG G   T           + ++V  ++   +
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGS 1096

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  V + G +++ G N     G  D N     P+ V A+  V    + AG  ++  LT 
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGD-NYSKTTPQKVNAISNVAA--IAAGEYYSLALTR 1153

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V + G N+ GQLG GD  DR TP+ +   E + +V  IAAG  + LA+T +G V+S+
Sbjct: 1154 DGSVWSWGDNSDGQLGLGDNEDRNTPQKV---EVLSNVAAIAAGEDHSLALTRDGSVWSW 1210

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G  S   LG  +  D   P+ + T      ++  ++AG+ H  A+   G  + WG  Y G
Sbjct: 1211 GRNSRGQLGLDDNDDRNTPQPVTTIS----NIKAIAAGNSHSFAISEEGLAWAWGYNYDG 1266

Query: 354  ALGHG 358
             LG G
Sbjct: 1267 QLGIG 1271



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 19/231 (8%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRP 207
           FT  N  +      ++A   HA  +   G V++ G NS           +   NRP    
Sbjct: 535 FTPTNVDALPLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRP---- 590

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           + + A+  V    +  G + +  L   G   + G N +GQLG GD + + TP+ +  L  
Sbjct: 591 QKINAISNVAA--IACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS- 647

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
             +VV +AAG  + LA+T +G ++S+G  +   LG G+      PR +        +VV 
Sbjct: 648 --NVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAIS----NVVA 701

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           ++AG  H +AL   G V++WG    G LG GD  D+  P+P++++ +  A+
Sbjct: 702 IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI 752



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 29/282 (10%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           S+IV  +AG +      +   L S+ S+++ G +  G LG G    +    T    P  +
Sbjct: 117 SNIVSVAAGRL------FSLALASDGSLWAWGGNYYGQLGMGDNDNR---LTPSKTPGLS 167

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            V  ++  + HA    QSG+V+  G N      F   H D       P  V  L  V  K
Sbjct: 168 DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADA------PVQVAGLSNV--K 219

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGP 278
            V AG  F+  L   G V   G+N   QLG G   +   TP   AP+  + ++  IAAG 
Sbjct: 220 SVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATP---APIAVLSNITAIAAGR 276

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + +A+  +G V+++G+  +  LG G+      P  + +       V  +++G  H +AL
Sbjct: 277 RHAMALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSL----ADVTAIASGWFHSLAL 332

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            S G ++ WG    G LG     D++LP  +SS+ + ++  G
Sbjct: 333 TSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISNAVSFAG 374



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 7/212 (3%)

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V+A  N +  +   G +++ GDN +   G        +F P  V+AL   P  ++ AG N
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP--PAAKIAAGDN 1043

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
                L   G V + G N+ GQLG G +    T      +  + +V  IA G S+ LAV  
Sbjct: 1044 HALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAVAR 1103

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G ++S+G      LG G+ + +  P+ +        +V  ++AG+ + +AL   G V++
Sbjct: 1104 DGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAIS----NVAAIAAGEYYSLALTRDGSVWS 1159

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG    G LG GD  D+  P+ +  L +  A+
Sbjct: 1160 WGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAI 1191



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 16/222 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P  +++V V+A    +  +   G ++  G N     G  D +  +  P     L  V   
Sbjct: 114 PVVSNIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRL-TPSKTPGLSDV--- 169

Query: 220 QVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              AG ++     T  G V   G N HGQLG  GD  D P    +A L  V SV   AAG
Sbjct: 170 AAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADAPV--QVAGLSNVKSV---AAG 224

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVV 336
             + LA+  +G V+++G+  +  LG G   + +  P  I        ++  ++AG  H +
Sbjct: 225 EFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLS----NITAIAAGRRHAM 280

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           AL   G V+ WG    G LG GD      P  +SSL    A+
Sbjct: 281 ALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTAI 322



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)

Query: 215  GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G P   V AG NF+  L   G + + G N  G   LG G +++  TP  +  L       
Sbjct: 980  GNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP---PAA 1036

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVS 329
            +IAAG ++ LA+  +G V+S+G  S+  LG G       + +P+ I        +V  ++
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS----NVAAIA 1092

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G  H +A+   G +++WG  Y G LG GD   KT P+ ++++ +  A+
Sbjct: 1093 CGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAI 1141



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 9/142 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N + QLG GD ++R  P+  AP+  V ++V +AAG  + LA+  +G ++++G
Sbjct: 86  GTVWVWGRNDYNQLGLGDDINRLAPEQ-APV--VSNIVSVAAGRLFSLALASDGSLWAWG 142

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG G+  + L P            V  ++ GD H +A   SG V+  G+   G 
Sbjct: 143 GNYYGQLGMGDNDNRLTPSKTPGLS----DVAAIAGGDYHALAATQSGEVWAMGRNDHGQ 198

Query: 355 LGH-GDEIDKTLP-EPLSSLKS 374
           LG  GD  D  +    LS++KS
Sbjct: 199 LGFTGDHADAPVQVAGLSNVKS 220



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 16/171 (9%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG----QLGHGDTLDRPTPKSIAPLEEVGS 270
           G P   V AG  F+  L   G V + G+N  G     LG  D +  PT     PL     
Sbjct: 491 GNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL----- 545

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGS---NFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
              IAAG  + LA+  +G V+S+G  S         G    E +P+ I        +V  
Sbjct: 546 AASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS----NVAA 601

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           ++ G  H +AL   G  ++WG  Y G LG GD + KT P  +++L + +A+
Sbjct: 602 IACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSNVVAM 652



 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A+   + LA+ G+G V+ +G      LG G+  + L P           ++V V+AG  
Sbjct: 72  VASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGRL 127

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
             +AL S G ++ WG  Y G LG GD  ++  P     L    A+ G
Sbjct: 128 FSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAAIAG 174



 Score = 48.5 bits (114), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G + +L + N  +V++ G++    LG G       +   I   S  ++  ++A   H
Sbjct: 221 VAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLS--NITAIAAGRRH 278

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  + + G V+  G N S   G  D   P   P  V +L  V    + +G   +  LT  
Sbjct: 279 AMALAEDGSVWAWGANGSGQLGFGDFETPK-APGRVSSLADV--TAIASGWFHSLALTSD 335

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G+N  G+LG   T D+  P   A +  + + V  A G  + LA+  +G V+S+G
Sbjct: 336 GVLWAWGNNGDGRLGTDATSDQSLP---AQVSSISNAVSFAGGQRHSLAIAADGSVWSWG 392

Query: 295 SGSNFCLG 302
             +   LG
Sbjct: 393 GNAYGQLG 400


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 127/272 (46%), Gaps = 20/272 (7%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  L S+  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 468 SGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSG--VTAIA 525

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCK--QVTAG 224
           A + H   ++ SG V+  G N+    G   + D++ P+       A+ G+P     + AG
Sbjct: 526 AGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPV-------AVGGLPSGVMAIAAG 578

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT    V   G+N+ GQLG G T +R TP +++ L     V  IAAG  +  A+
Sbjct: 579 NYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPS--GVTAIAAGNYHTCAL 636

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V+ +G   +  LG G   +   P A+         V  ++AGDEH  AL  SG V
Sbjct: 637 TSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGDEHTCALTGSGGV 693

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           + WG  Y G LG G   +++ P  +S L S +
Sbjct: 694 WCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGV 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 120/276 (43%), Gaps = 28/276 (10%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L+S+  V+  G +L G LG G              PS   V  ++
Sbjct: 162 SGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPS--EVTAIA 219

Query: 170 ASENHAAFVLQSGQVFTCGDNS-------SFCCGHRDTNRPIFRPRLVEALKGVP--CKQ 220
           A   H   +  SG V+  GDN        SF     D++ P        A+ G+P     
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSF----TDSSTP-------AAVGGLPSGVTA 268

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG  +T  LT  G V   G N  GQLG G   +R TP ++  L     V  IAAG ++
Sbjct: 269 IAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPS--GVTAIAAGGAH 326

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A+T +G V+ +G   +  LG G   D   P A+         V  ++AG  H  A  S
Sbjct: 327 TCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSG---VTAIAAGGAHTCARTS 383

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           SG V+ WG  + G LG G   D++ P  +S L S +
Sbjct: 384 SGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGV 419



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 124/293 (42%), Gaps = 16/293 (5%)

Query: 89  NWKRVLRFLQSVEHSSDIVETS--AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHG 145
           NW   L      + S+ +  +   +G   I  G  HT  L S+  V   G +  G LG G
Sbjct: 87  NWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDG 146

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T +         PS   V  ++A   H   ++ SG V+  G N S   G       I+
Sbjct: 147 SYTDRSTPVAVSGLPSG--VTAIAAGGAHTCALMSSGGVWCWGYNLS---GQLGDGSTIY 201

Query: 206 RPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
               V A+ G+P +   + AG   T  LT  G V   G N  GQLG G   D  TP ++ 
Sbjct: 202 HITPV-AVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVG 260

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L     V  IAAG  Y  A+T +G V+ +G   +  LG G   +   P A+        
Sbjct: 261 GLPS--GVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG-- 316

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            V  ++AG  H  AL SSG V+ WG    G LG G   D++ P  +S L S +
Sbjct: 317 -VTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGV 368



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-----AHVVQVS 169
           I  G  HT  ++ S  V+  G +  G LG G       SFT  + P+A     + V  ++
Sbjct: 218 IAAGYAHTCALTGSGGVWCWGDNGFGQLGDG-------SFTDSSTPAAVGGLPSGVTAIA 270

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   +   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   
Sbjct: 271 AGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRST--PGAVGGLPSGV--TAIAAGGAH 326

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G   DR TP +++ L     V  IAAG ++  A T +
Sbjct: 327 TCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPS--GVTAIAAGGAHTCARTSS 384

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G      LG G   D   P A+         V  ++AG+ H  AL  S  V+ W
Sbjct: 385 GGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSG---VTAIAAGNYHTCALTGSDGVWCW 441

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           G  + G LG G   +++ P  +S L S +
Sbjct: 442 GDNFYGQLGDGTTTNRSTPGAVSGLPSGV 470



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 112/259 (43%), Gaps = 14/259 (5%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  L+S+  V+  G +  G LG G  T           PS   V+ ++
Sbjct: 519 SGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG--VMAIA 576

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  S  V+  G NS    G    TNR    P  V  L  GV    + AG   
Sbjct: 577 AGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRST--PVAVSGLPSGV--TAIAAGNYH 632

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G T +R TP +++ L     V  IAAG  +  A+TG+
Sbjct: 633 TCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGDEHTCALTGS 690

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G      LG G   +   P A+         V  ++AG  H  AL  SG V  W
Sbjct: 691 GGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGVMCW 747

Query: 348 GKGYCGALGHGDEIDKTLP 366
           G    G LG G  + +T P
Sbjct: 748 GNNGDGQLGDGRPLYRTTP 766



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 99/221 (44%), Gaps = 11/221 (4%)

Query: 111 AGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G M I  G YHT  ++ S  V+  G++  G LG G  T +         PS   V  ++
Sbjct: 570 SGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG--VTAIA 627

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   
Sbjct: 628 AGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGDEH 683

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+
Sbjct: 684 TCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGS 741

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           G V  +G+  +  LG G       P  + T    G+++  +
Sbjct: 742 GGVMCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 782



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 75/164 (45%), Gaps = 7/164 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T  LT  G V   G N  GQLG G   DR TP +++ L     V 
Sbjct: 59  LQGV--TAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPS--GVT 114

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG ++  A+T +G V  +G      LG G   D   P A+         V  ++AG 
Sbjct: 115 AIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG---VTAIAAGG 171

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            H  AL SSG V+ WG    G LG G  I    P  +S L S +
Sbjct: 172 AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEV 215



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            S +PL+    V  IAAG  +  A+TG+G V+ +G   +  LG G   D   P A+    
Sbjct: 54  SSFSPLQ---GVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLP 110

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
                V  ++AG  H  AL SSG V  WG  Y G LG G   D++ P  +S L S +
Sbjct: 111 SG---VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGV 164


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + + G+ F  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+  G    
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++  G  + +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
              F C G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 EGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 9/250 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + TG YH+L I+ S +V++ G +    LG   +  +    T +   +A   V  +   + 
Sbjct: 40  VATGYYHSLAITRSGTVYTTGKNDRRQLGRSGDEHKWARVTPLETITA---VAGAVGLDF 96

Query: 175 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  V  +G+V+T G  +      G          PR V+ L       V  G      LT
Sbjct: 97  SVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALT 156

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G    GQLG G  + R +P+ IA L   G VV +AAG +Y LAVTG   VY+
Sbjct: 157 RDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKG-VVSVAAGSTYSLAVTGADQVYA 215

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FGS S   LG G+     +P  ++     G  V  V+AGD H +A   +G++Y WG    
Sbjct: 216 FGSNSKGQLGVGDTTARFRPTLVRFL--DGKQVCHVTAGDFHTLARTRTGHLYAWGSNQW 273

Query: 353 GALGHGDEID 362
           G LG G E D
Sbjct: 274 GQLGLGSEAD 283



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 11/241 (4%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PS-AAHVVQVSASENHAAFVLQSGQVFTC 187
           SV   G++  G LG G         TR+   PS    +  V+    H+  + +SG V+T 
Sbjct: 2   SVAVWGATGAGQLGIG--DADGTGKTRVTLVPSLEQELAFVATGYYHSLAITRSGTVYTT 59

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G         R   V  L+ +       GL+F+  +   G V+T G    GQ
Sbjct: 60  GKNDRRQLGRSGDEHKWAR---VTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQ 116

Query: 248 LGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           LG G        +   P++ +G+  V+ +A G  + LA+T +G V+S+G G++  LG G+
Sbjct: 117 LGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQ 176

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                 P  I   R KG  VV V+AG  + +A+  +  VY +G    G LG GD   +  
Sbjct: 177 FVSRHSPEVIADLRGKG--VVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTTARFR 234

Query: 366 P 366
           P
Sbjct: 235 P 235



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 104/248 (41%), Gaps = 34/248 (13%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPSAAHV 165
           + +  G  H L L  +  VFS G    G LG       H PE    +            V
Sbjct: 143 ISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLR--------GKGV 194

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A   ++  V  + QV+  G NS    G  DT    FRP LV  L G     VTAG 
Sbjct: 195 VSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT-ARFRPTLVRFLDGKQVCHVTAGD 253

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA- 283
             T   T  GH++  GSN  GQLG G   D    P  I  + E+G V++++AG  + +A 
Sbjct: 254 FHTLARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVAL 313

Query: 284 ---VTGNG----VVYSFGSGSNFCLGHGEQHDELQPRAIQTF------RRKGIHVVRVSA 330
              VT  G    V  +FG+ +   LG    H     +  Q F      R   +H +++ A
Sbjct: 314 IRTVTETGAQATVAVAFGANNTGQLGLDPDHP--ASKRTQLFHPVRLKRISSMHPIKLIA 371

Query: 331 GDEHVVAL 338
           G  H + +
Sbjct: 372 GGNHTIMI 379



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 4/144 (2%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G V+T G N   QLG     D      + PLE + +V   A G  + + V   G V
Sbjct: 50  ITRSGTVYTTGKNDRRQLGRSG--DEHKWARVTPLETITAVAG-AVGLDFSVVVDSTGKV 106

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGK 349
           Y++G G    LG G +  E   R  +  +  G   V+ V+ G  H +AL   G V++WG+
Sbjct: 107 YTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGE 166

Query: 350 GYCGALGHGDEIDKTLPEPLSSLK 373
           G  G LG G  + +  PE ++ L+
Sbjct: 167 GADGQLGDGQFVSRHSPEVIADLR 190


>gi|330791573|ref|XP_003283867.1| hypothetical protein DICPUDRAFT_147589 [Dictyostelium purpureum]
 gi|325086253|gb|EGC39646.1| hypothetical protein DICPUDRAFT_147589 [Dictyostelium purpureum]
          Length = 454

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 36/293 (12%)

Query: 115 QITTGRYHTLLISNS-------SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           ++  GR ++L++++         V   G +  G +G G    + V  T +       V+ 
Sbjct: 145 KVVGGRSYSLVLTSKHYYFNEGKVLGFGENNFGQIGTGDIHNKTVP-TLVENLDQFRVID 203

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--------------------- 206
           V    +H+  V  SG VF  G N     G +       +                     
Sbjct: 204 VDVGLDHSLVVTSSGHVFGWGYNVEGQIGQKVVEYTRVQSSTDQLPGEDSLEGQMVADVE 263

Query: 207 ---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSI 262
              P LV  L+ V   +V  G + +  L+ RG+V+  GSN  G LG  GD + R    + 
Sbjct: 264 YSSPTLVPGLEKVKISKVFCGYDSSFLLSARGNVYAFGSNEVGSLGLGGDHIGRVVTPTK 323

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRK 321
             L E   + QI++G S+ L +  +G VY  G GS   LG G+   +  +P  +  F+  
Sbjct: 324 VKLPE--KIQQISSGSSHTLFLGNSGNVYGCGWGSEGRLGLGDNTSNRNEPVLLNYFKDN 381

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            I +++VSAG  H +ALD  G VY+WG G  G LGHGDE D  LP  ++  ++
Sbjct: 382 NIRIIKVSAGGSHSLALDDQGNVYSWGNGSNGKLGHGDEKDCHLPTKINYFQN 434


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 128/269 (47%), Gaps = 19/269 (7%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSGQ 183
            +  +F+CG    G LG G   +  VS  R N P  +HV    V V +   HA  +   G+
Sbjct: 3108 DGKLFACGEGTNGRLGLG--HSNNVSTPRAN-PYLSHVLVRRVAVHSGGKHALALTADGK 3164

Query: 184  VFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            V++ G+      GH   NR     PRL+E+L G     +  G   +  +T RGH++T G 
Sbjct: 3165 VYSWGEGEDGKLGH--GNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGL 3222

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFC 300
              +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T  G V+S+G G    
Sbjct: 3223 GEYGRLGHGDDNIQLVPKMVEALANY-RVIQVACGSRDAQTLALTACGKVFSWGDGDFGK 3281

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LG G       P  ++  R   + V +V  G +  +AL   G V+TWGKG    LGHG +
Sbjct: 3282 LGRGGSDGCAIPMNVE--RLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCD 3339

Query: 361  IDKTLPEPLSSLKS----HLAVQGLSVLA 385
                 P  + +L+     H+AV  L  LA
Sbjct: 3340 AHVRRPTLVEALRGRRVIHVAVGALHCLA 3368



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 8/189 (4%)

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   G+V++ G+      GH   NR  + RP+L+ AL G+    +  G   +  L
Sbjct: 4048 KHCLALSADGEVYSWGEGEDGKLGH--GNRVSYDRPKLITALSGLEVVCIACGGAHSACL 4105

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGV 289
            T RG ++T G   +G+LGHGD+ D+  PK +  L     V+ +A  +G +  L +T +  
Sbjct: 4106 TARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSF-RVIDVACGSGDAQTLCITDDDN 4164

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+S+G G    LG G       P  I     KG+ V++V  G +  VAL   G VYTWGK
Sbjct: 4165 VWSWGDGDYGKLGRGGSEGCKLPMRIDCL--KGLRVIKVECGSQFSVALCQCGSVYTWGK 4222

Query: 350  GYCGALGHG 358
            G    LGHG
Sbjct: 4223 GDYHRLGHG 4231



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L ++  V+S G    G LGHG   T   +   I   +   V+ ++    H+A V
Sbjct: 3153 GKHALALTADGKVYSWGEGEDGKLGHGNRIT-LEAPRLIESLAGERVISIACGSAHSACV 3211

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
               G ++T G       GH D N  +  P++VEAL      QV  G     T  LT  G 
Sbjct: 3212 TARGHLYTWGLGEYGRLGHGDDNIQLV-PKMVEALANYRVIQVACGSRDAQTLALTACGK 3270

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P ++  L  +G V Q+  G  + LA+T +G V+++G G
Sbjct: 3271 VFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLG-VTQVECGAQFSLALTRDGEVWTWGKG 3329

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P  ++  R  G  V+ V+ G  H +A+ S   V+ WG    G  G
Sbjct: 3330 DYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQG 3387

Query: 357  HG 358
            +G
Sbjct: 3388 NG 3389



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 10/216 (4%)

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAG 224
            VS   N  +      +VF  G N     G    ++   P+F P L  AL+ V    +  G
Sbjct: 3043 VSVDNNPPSLPNDCPKVFVWGLNDKDQLGGVKGSKVKVPVFSPAL-SALRPV---HIAGG 3098

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLA 283
                  ++  G +  CG  T+G+LG G + +  TP++   L  V    V + +G  + LA
Sbjct: 3099 SKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALA 3158

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +G VYS+G G +  LGHG +     PR I++    G  V+ ++ G  H   + + G+
Sbjct: 3159 LTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESL--AGERVISIACGSAHSACVTARGH 3216

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +YTWG G  G LGHGD+  + +P+ + +L ++  +Q
Sbjct: 3217 LYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQ 3252



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L ++  V+S G    G LGHG      VS+ R   I   S   VV ++    H+
Sbjct: 4047 GKHCLALSADGEVYSWGEGEDGKLGHGNR----VSYDRPKLITALSGLEVVCIACGGAHS 4102

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-- 233
            A +   G+++T G       GH D+   +  P+LVEAL       V  G      L I  
Sbjct: 4103 ACLTARGRIYTWGKGRYGRLGHGDSEDQLI-PKLVEALSSFRVIDVACGSGDAQTLCITD 4161

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
              +V + G   +G+LG G +     P  I  L+ +  V+++  G  + +A+   G VY++
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGL-RVIKVECGSQFSVALCQCGSVYTW 4220

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G    LGHG      +P  +     +G  +V ++ G  H VA   +G VYTWG    G
Sbjct: 4221 GKGDYHRLGHGSYEHVRRPMRVTGM--QGKMIVSIATGSLHCVACTDTGEVYTWGDNDEG 4278

Query: 354  ALGHGDEIDKTLPEPLSSLKSHL 376
             LG G  +    P  L +L+ ++
Sbjct: 4279 QLGDGTTLAAQRPRLLMALQVNI 4301



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 8/218 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA   V ++        V   G++F CG+  N     GH +    +  PR    L  V  
Sbjct: 3088 SALRPVHIAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNN---VSTPRANPYLSHVLV 3144

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            ++V   +G      LT  G V++ G    G+LGHG+ +    P+ I  L     V+ IA 
Sbjct: 3145 RRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAG-ERVISIAC 3203

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G ++   VT  G +Y++G G    LGHG+ + +L P+ ++      +  V   + D   +
Sbjct: 3204 GSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTL 3263

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            AL + G V++WG G  G LG G      +P  +  L S
Sbjct: 3264 ALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERLNS 3301



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 11/261 (4%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +V+  G +  G LG G E  +  + T  +  +A + VQ+   E     V   G+V+  G 
Sbjct: 3952 AVYGWGHNHRGQLG-GVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGY 4010

Query: 190  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 247
             +    G    +  + +P L+ +++ V   +V   +G      L+  G V++ G    G+
Sbjct: 4011 GAGGRLGIGGIDS-VSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 248  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
            LGHG+ +    PK I  L  +  VV IA G ++   +T  G +Y++G G    LGHG+  
Sbjct: 4070 LGHGNRVSYDRPKLITALSGL-EVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSE 4128

Query: 308  DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            D+L P+ ++      +  V   +GD   + +     V++WG G  G LG G      LP 
Sbjct: 4129 DQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPM 4188

Query: 368  PLSSLKSHLAVQGLSVLAEVC 388
             +  LK      GL V+   C
Sbjct: 4189 RIDCLK------GLRVIKVEC 4203



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 30/270 (11%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR++    S    +S G    G LGHG +T    +   ++  +   VV+V+A    +A +
Sbjct: 534 GRHYLCRSSCGGAWSWGIGEDGRLGHG-DTAARDAPQPLHHLAHHEVVRVAAGLACSAVI 592

Query: 179 LQSGQVFTCGDNSSFCCGHRD-----TNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              G ++T G  +    GH       T +P+ F    +E +  V    +  G   T   T
Sbjct: 593 TSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDV---ALGWGEGSTLCCT 649

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G    G           TP++++ L  +  V ++  G  +  A+T  G VY+
Sbjct: 650 WEGAVQVFGEGEAG-----------TPRALSALA-MFRVTRVYTGEHWHAALTDGGQVYT 697

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G  + LGHG       P+ ++    +GI +V +S G  H +AL S G ++ WG    
Sbjct: 698 WGKGDGYRLGHGNMESTKIPKLVEAL--QGIKIVDLSLGASHGIALSSEGVLFVWGT--- 752

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
                  +I   +P+P+ +        G+S
Sbjct: 753 ---HERTQISNPVPQPVKAFNPSFKANGVS 779



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L +   VFS G    G LG G  +  C     +   ++  V QV      +  + + G+V
Sbjct: 3265 LTACGKVFSWGDGDFGKLGRG-GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH   +  + RP LVEAL+G     V  G      +T    V   G N 
Sbjct: 3324 WTWGKGDYFRLGH-GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDND 3382

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEV 268
            HGQ G+G T     P  +A +E V
Sbjct: 3383 HGQQGNGTTCVNRRPALVAGVEGV 3406



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 12/115 (10%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + QIA      L +T +G VY+              +D + P  +     K I  V   +
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTL------------PYDTMTPHLVPGLESKTITQVSCHS 532

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
              H +   S G  ++WG G  G LGHGD   +  P+PL  L  H  V+  + LA
Sbjct: 533 LGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLA 587


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 106/225 (47%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           + +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  KSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G E   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G E  
Sbjct: 122 EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+L ++++ +  + G++L G LG G  TT   +   ++ P+   V  ++A ++H
Sbjct: 110 IAAGHDHSLAVTSAGTALAWGNNLFGQLGDG-STTDSSTPIAVDLPAGTTVTAIAAGDDH 168

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  +G     GDN     G   T R    P  V+   G     + AG+  +  LT  
Sbjct: 169 SLAVTSAGTALAWGDNDRGELGDGTTTR-RDTPVDVDLPAGTTVTAIAAGIGHSLALTSA 227

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G N+ GQLG G T D  TP ++  L    +V  IAAG  + LAVT  G + ++G
Sbjct: 228 GTVLTWGLNSDGQLGDGTTTDSSTPIAVD-LPAGTTVTAIAAGSLHSLAVTTAGTILAWG 286

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           + S+  LG G   +   P A+         +  +  G +H +A+ S+G    WG    G 
Sbjct: 287 NNSDGQLGDGTTTNSSTPIAVN--LPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQ 344

Query: 355 LGHGDEIDKTLP 366
           LG G   + + P
Sbjct: 345 LGDGTTTNSSTP 356



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 81/189 (42%), Gaps = 10/189 (5%)

Query: 181 SGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           S  V   GDN     G     D++ PI     V+   G     + AG + +  +T  G  
Sbjct: 71  SDTVLAWGDNKDGELGDGTTTDSSTPIA----VDLPAGTTITAIAAGHDHSLAVTSAGTA 126

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G+N  GQLG G T D  TP ++  L    +V  IAAG  + LAVT  G   ++G   
Sbjct: 127 LAWGNNLFGQLGDGSTTDSSTPIAVD-LPAGTTVTAIAAGDDHSLAVTSAGTALAWGDND 185

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG G       P  +      G  V  ++AG  H +AL S+G V TWG    G LG 
Sbjct: 186 RGELGDGTTTRRDTP--VDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGD 243

Query: 358 GDEIDKTLP 366
           G   D + P
Sbjct: 244 GTTTDSSTP 252



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 4/202 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+L L S  +V + G +  G LG G  TT   +   ++ P+   V  ++A   H
Sbjct: 214 IAAGIGHSLALTSAGTVLTWGLNSDGQLGDG-TTTDSSTPIAVDLPAGTTVTAIAAGSLH 272

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  +G +   G+NS    G   T      P  V          +  G + +  +T  
Sbjct: 273 SLAVTTAGTILAWGNNSDGQLGDGTTTNS-STPIAVNLPASTTITAIDGGRDHSLAVTSA 331

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G     G N  GQLG G T +  TP ++  L    +V    AG  + LAVT  G + ++G
Sbjct: 332 GSALAWGDNDDGQLGDGTTTNSSTPIAVN-LPADTTVTATTAGSLHSLAVTTAGTILAWG 390

Query: 295 SGSNFCLGHGEQHDELQPRAIQ 316
           + S+  LG G   +   P A+ 
Sbjct: 391 NNSDGRLGDGTTTNSSTPIAVN 412


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Homo sapiens]
          Length = 310

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 4/247 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLK 373
            P++  K
Sbjct: 301 TPVTVEK 307



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G+  ++  P  +++L+
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQ 255



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
               G +G G  +++ +P  ++    +  V  ++     C  +V
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 221



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  H+V   +
Sbjct: 58  VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATT 116

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G V+TWG      LG+G      +P  +S+  S+  V
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 806

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 118/256 (46%), Gaps = 14/256 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   + +G YH+L L  + +V++ G +  G LG G   T      ++  P    V  ++A
Sbjct: 544 GVTALASGTYHSLALKQDGTVWAWGLNNLGQLGDG---TTVSRTEQMPVPGLTDVTALAA 600

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S  H+  + Q G V+T G NSS   G   T      P  V  L GV    + AGL  +  
Sbjct: 601 STYHSLALKQDGTVWTWGYNSSGQLGD-GTTASRLTPAQVPGLTGV--SAIAAGLVHSLA 657

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V   G NT GQLG+G  ++ P P  +  L  V +   IAAG  + LA+  +G  
Sbjct: 658 LKQDGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGLTGVSA---IAAGSYHSLALKQDGTA 714

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G      LG+      L P  +Q        V  ++ GD H +AL   G V+TWG  
Sbjct: 715 WSWGRNGTGQLGNETITGSLTPVQVQGL----TAVTALAGGDAHSMALLRDGTVWTWGYN 770

Query: 351 YCGALGHGDEIDKTLP 366
             G LG G  +D+T P
Sbjct: 771 AEGELGDGTTLDRTAP 786



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   ++   YHTL L  + +V+  G +  G LG   +T   V  T    P    V  +++
Sbjct: 494 GATALSATAYHTLALAQDGTVWGWGYNDSGQLG---DTVDMVRVTPAPLPGLTGVTALAS 550

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGL 225
              H+  + Q G V+  G N+    G      R    P+  P L +         + A  
Sbjct: 551 GTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPV--PGLTD------VTALAAST 602

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   G V T G N+ GQLG G T  R TP  +  L  V +   IAAG  + LA+ 
Sbjct: 603 YHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLTGVSA---IAAGLVHSLALK 659

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++G  ++  LG+G   +   P  +Q        V  ++AG  H +AL   G  +
Sbjct: 660 QDGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGL----TGVSAIAAGSYHSLALKQDGTAW 715

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           +WG+   G LG+         E ++   + + VQGL+ +  + 
Sbjct: 716 SWGRNGTGQLGN---------ETITGSLTPVQVQGLTAVTALA 749



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 2/102 (1%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IAAG ++ L V  +G   ++G      LG G   D   P  +Q     G   +  +A
Sbjct: 443 VTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATA 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              H +AL   G V+ WG    G LG   ++ +  P PL  L
Sbjct: 503 --YHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAPLPGL 542


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G +  
Sbjct: 122 EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 5/250 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEVFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  +     +G+ V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GNQSTPCRLAL---QGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 275

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 276 TPVVVEKDRI 285



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 7/181 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   V   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAV 378
               HV+ V+ G  H + L S G V+ WG    G +G G   ++ +P  + SSL++ + V
Sbjct: 125 LSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVV 184

Query: 379 Q 379
            
Sbjct: 185 N 185


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+  P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+  P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G   +K  P
Sbjct: 326 QLGIGSTSNKKSP 338



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 115/244 (47%), Gaps = 9/244 (3%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F    +V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V + G   HGQ+G    
Sbjct: 65  QLGHDKSRK---KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIA 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            D    P++I  L ++  +VQ+A G  + LA++    +YS+G      LG G E+  E  
Sbjct: 122 EDYIRVPRNIKSLSDI-QIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           PR I++    GI    ++AG  H  AL  SG ++ WG+   G LG  DE D++ P  L S
Sbjct: 181 PRHIKSL--SGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKS 238

Query: 372 LKSH 375
           L+S 
Sbjct: 239 LRSQ 242



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 8/263 (3%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSCGEAHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+   ++
Sbjct: 99  LNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G ++ +G  
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRN 217

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQ 379
           H     +  P  +  L  ++  Q
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQ 298



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S+++S G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLKSLRSQKIIYICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH        P+ +   E +G++V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   ++  P  ++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 27/317 (8%)

Query: 106 IVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFP 160
           IVE+  G +   ++ G Y T  +++S  +++ G +  G+  +G   + +Q +  +R++ P
Sbjct: 352 IVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIP-SRLSGP 410

Query: 161 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            +   +  V+  E H A V  SGQ+FT GD +    GH      I +P+ VE+L G+  K
Sbjct: 411 LNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLE-SISQPKEVESLSGLWVK 469

Query: 220 QVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
               G   T            F T  G + T G    G+LGHGD   +  P  +A L + 
Sbjct: 470 AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVD- 528

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
              VQ++ G    + +T  G VY+ GS  +  LG+ +  D  +  AI   + K   V  +
Sbjct: 529 HDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKD--KSIAIVGGKLKDEFVKEI 586

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLA 385
           S+G  HV AL S G +YTWG G  G LG GD  D+  P  + +L+         G    A
Sbjct: 587 SSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTA 646

Query: 386 EVC--PTIVQEDTRSCS 400
            +C   +I   D  +CS
Sbjct: 647 AICLHKSISSTDQSACS 663



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGXLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQ
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQ 533



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  ++++ G      +T  G V   G  + G LGH   +D   PK +  L 
Sbjct: 298 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLT 357

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 324
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 358 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 415

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL       GL V 
Sbjct: 416 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL------SGLWVK 469

Query: 385 AEVC 388
           A  C
Sbjct: 470 AAAC 473



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
           G  G LGH   +D   P+ + SL
Sbjct: 334 GSGGXLGHKVNMDMGNPKIVESL 356


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI + RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GNQPTPCRIAAL--QGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 APVVVEKDRI 310



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR ++AL G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDALSGKKIACLSYGSGPHIV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEVYVWGYN 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 233 GNGQLGLGSSGNQPTPCRIAALQ 255


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 57  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 115

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 116 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 175

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G V+ +G   N  LG G  
Sbjct: 176 QVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSS 235

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 236 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 293

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 294 TPVVVEKDRI 303



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 4/233 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +  L  +   VF+ G +    LG+G      V +      S   V++V+    H+  
Sbjct: 100 SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 159

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+PI R R+   L+      +  G   +  +   G 
Sbjct: 160 LTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQSKVVVNIACGQMCSMAVVNTGE 218

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N +GQLG G + ++PTP  +A L+ +  V ++A G ++ L +T  G VY++G+ 
Sbjct: 219 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 277

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           S   LG G + ++  P  +   + + I +    +      A    G+VY WG+
Sbjct: 278 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS-AAKTQGGHVYMWGQ 329



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 4/151 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 53  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 111

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 112 EVFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 170

Query: 349 KGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
               G +G G   ++ +P  ++  L+S + V
Sbjct: 171 YNNSGQVGSGSTANQPIPRRVTGCLQSKVVV 201



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           S A L+ V       +  + +L  T N  ++  G+    CLG G+    ++PR + +   
Sbjct: 31  SEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSG 90

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           K I  +   +G  H+V   + G V+TWG      LG+G      +P  +S+
Sbjct: 91  KKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHIST 140


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P+LVE L GVP  Q++AG
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T     P  +  L+    V  +A G S+   +
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDS-QKVEFLACGGSHTALL 167

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G V++FG+G +  LGH    +EL+PR +      GI V +V+ G  H +A  S  G 
Sbjct: 168 TEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTEL--TGIRVTQVACGRRHTLAYVSDLGK 225

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           V+++G G  G LG+G   ++ +P P+ 
Sbjct: 226 VFSFGSGKEGQLGNGGTHNQLIPLPMK 252



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G       +   
Sbjct: 34  SIEHARFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQL 93

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
           +   S   +VQ+SA + H+  +  SG +++ G N       GH D       P LVEAL 
Sbjct: 94  VEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEE---FPSLVEALD 150

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
               + +  G + T  LT  G V T G+  HGQLGH  T +   P+ +  L  +  V Q+
Sbjct: 151 SQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGI-RVTQV 209

Query: 275 AAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           A G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 210 ACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 252



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N HGQLG G      PTP+ +  L  V  +VQI+AG 
Sbjct: 51  QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGV-PLVQISAGK 109

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +A++ +G +YS+G      LG G    E  P  ++    + +  +  + G  H   L
Sbjct: 110 AHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFL--ACGGSHTALL 167

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              G V+T+G G  G LGH    ++  P  ++ L
Sbjct: 168 TEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTEL 201



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRV 328
           S++QI  G  + LA++  G ++++G   +  LG G     +  P+ ++     G+ +V++
Sbjct: 48  SIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHL--SGVPLVQI 105

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           SAG  H +AL  SG +Y+WG+   G LG G    +  P  + +L S 
Sbjct: 106 SAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQ 152


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 126/285 (44%), Gaps = 36/285 (12%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 279 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 338

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+FT GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 339 SAGQIFTYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 397

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 398 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 456

Query: 290 VYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V++ GS  +  LG+    D    L    ++T       V  +S+G  H+  L  +G V+T
Sbjct: 457 VFTIGSKEHGRLGNPLSEDTSICLIEGPLKTE-----FVREISSGSSHIAVLTMNGKVFT 511

Query: 347 WGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC 388
           WGKG  G LG GD +D++ P   E L   + H    G +    +C
Sbjct: 512 WGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAIC 556



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 242 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 300

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 301 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 360 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 417

Query: 357 HGDEIDKTLP---EPLSSL 372
           H D+  K +P   EPL+  
Sbjct: 418 HADKKMKLVPTCVEPLNDF 436



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 6/211 (2%)

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 224
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 164 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 223

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 224 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 282

Query: 285 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 283 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 341

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            ++T+G G  G LGHGD +    P+ + SLK
Sbjct: 342 QIFTYGDGTFGVLGHGDTLTVARPKQVESLK 372


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G   T      P++VE L GVP  Q++AG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALL 257

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLAYVSDFGK 315

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G  +D+ +P P+         L+SH + + L ++A
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIA 364



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G       +   +   +   + Q+SA E
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSAL 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 257 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFG 314

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 374

Query: 349 K 349
           K
Sbjct: 375 K 375


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 4/243 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +    V IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPL 369
            P+
Sbjct: 301 APV 303



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  +  V ++ G    +A+ ++G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-AVNIACGQMCSMAVVNTGEVYVWGYN 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 233 GNGQLGLGSSGNQPTPCRIAALQ 255


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 115/244 (47%), Gaps = 9/244 (3%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F    +V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V + G   HGQ+G    
Sbjct: 65  QLGHDKSRK---KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIA 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            D    P++I  L ++  +VQ+A G  + LA++    +YS+G      LG G E+  E  
Sbjct: 122 EDYIRVPRNIKSLSDI-QIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           PR I++    GI    ++AG  H  AL  SG ++ WG+   G LG  DE D++ P  L S
Sbjct: 181 PRHIKSL--SGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKS 238

Query: 372 LKSH 375
           L+S 
Sbjct: 239 LRSQ 242



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G   +K  P
Sbjct: 326 QLGIGSTSNKKSP 338



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 8/263 (3%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSCGEAHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+   ++
Sbjct: 99  LNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G ++ +G  
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRN 217

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQ 379
           H     +  P  +  L  ++  Q
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQ 298



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S+++S G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLKSLRSQKIIYICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH        P+ +   E +G++V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   ++  P  ++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 11/249 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 374 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSD 433

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
            H   +   G+VF+ GD      GH ++    + P++V+  L        +AG   +  +
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIVQGPLFSKIVVSASAGYRHSAAV 492

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R TP  +  +  VG   Q+A G S+ +AV  +G  +
Sbjct: 493 TNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG---QVACGSSHTIAVAQDGRTM 549

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 550 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 607

Query: 351 YCGALGHGD 359
            C   G  +
Sbjct: 608 SCLGCGSSE 616



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 130/273 (47%), Gaps = 32/273 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASEN 173
           HTL I+ +  VFS G    G LGHG       P+  Q   F++I       VV  SA   
Sbjct: 435 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKI-------VVSASAGYR 487

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V   G+++T G+      GH D+ +    P LV+ + GV   QV  G + T  +  
Sbjct: 488 HSAAVTNDGELYTWGEGDFGRLGHSDS-QSRNTPTLVKDISGV--GQVACGSSHTIAVAQ 544

Query: 234 RGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 291
            G  + + G   +G+LGHGDT     PK I  L   G ++ ++ AG    LA+T  G V+
Sbjct: 545 DGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVF 602

Query: 292 SFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           ++G GS  CLG G  +   L+PR ++      I  + +S GD H +AL     VY WG  
Sbjct: 603 AWGCGS--CLGCGSSETTSLRPRFVEDLSITKI--IDISCGDSHCLALSHENEVYAWGNN 658

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
             G  G G         P++  K  L ++G+S+
Sbjct: 659 TMGQCGQGHT-----STPITRPKKVLGLEGVSI 686



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 6/235 (2%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LGHG    Q     +I       VVQ++    H+A V   G++
Sbjct: 3781 LTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVVTADGKL 3839

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHTCGSN 243
            FT G   S   G R T+  + +P  V AL+G    QV+ GLN T  L++ G  V   G  
Sbjct: 3840 FTFGSGESGRLGQRSTSNKM-QPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDG 3898

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             +G+LG G +  +  P+ +  L   G + ++  G  + + +  +G VY+FG      L  
Sbjct: 3899 DYGKLGAGSSTAKYYPQKVEQLCNKG-MKKVCCGAQFSVVLATDGHVYTFGQERLIGLPD 3957

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
                +   P+ + +   +G+ +  ++ G EHV+AL S+G +Y WG    G LG G
Sbjct: 3958 SMLKNRSNPQVVPSL--EGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLG 4010



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 8/263 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 171
            Q+  G+  + LI SN +V + G    G LG G      V      F       +V    S
Sbjct: 3715 QVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGS 3774

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3775 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3833

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 290
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3834 TADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3892

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++FG G    LG G    +  P+ ++    KG+   +V  G +  V L + G+VYT+G+ 
Sbjct: 3893 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMK--KVCCGAQFSVVLATDGHVYTFGQE 3950

Query: 351  YCGALGHGDEIDKTLPEPLSSLK 373
                L      +++ P+ + SL+
Sbjct: 3951 RLIGLPDSMLKNRSNPQVVPSLE 3973



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 340 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 396

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG    +  P+ +Q      I VV  SAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 457 GHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQ 515

Query: 362 DKTLP 366
            +  P
Sbjct: 516 SRNTP 520



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 8/165 (4%)

Query: 217  PC----KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS 270
            PC    +QV  G N +  +   G V   G   +G+LG G++ D   P  I+  +   V  
Sbjct: 3708 PCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQ 3767

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +V       + +A+T  G V+S+G G    LGHG    + +P+ I+    +G  VV+++ 
Sbjct: 3768 LVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEAL--QGEDVVQLAC 3825

Query: 331  GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            G  H   + + G ++T+G G  G LG     +K  PE +++L+ +
Sbjct: 3826 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGY 3870



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  GSN+  QL  G       PK      +  +   I AG     +V+ +G V + G G
Sbjct: 340 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQT---IEAGQYCTFSVSTDGSVKACGKG 396

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 355
           S   LG G+ +++  P+ +     + I  V  S G D H +A+   G V++WG G  G L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456

Query: 356 GHGDEIDKTLPE 367
           GHG+   +  P+
Sbjct: 457 GHGNSATQKYPK 468



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   VF+ G   C  LG G   T  +    +   S   ++ +S  ++H   +    +V
Sbjct: 595 LTSAGQVFAWGCGSC--LGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEV 652

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+N+   CG   T+ PI RP+ V  L+GV  +Q+TAG
Sbjct: 653 YAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAG 692


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G   T      P++VE L GVP  Q++AG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALL 257

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLAYVSDFGK 315

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G  +D+ +P P+         L+SH + + L ++A
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIA 364



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G       +   +   +   + Q+SA E
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSAL 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 257 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFG 314

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 374

Query: 349 K 349
           K
Sbjct: 375 K 375


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H   ++    V + G       GH D  +RP+  P  V AL G     V  
Sbjct: 16  VLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPM--PTFVSALDGCEITSVIC 73

Query: 224 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  +   R  V++ G    G+LGHG++ D   P +I  L+ +  + QIA G S+ L
Sbjct: 74  GADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGL-QIKQIACGDSHCL 132

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT NG V S+G   N  LG G+  D   P+ ++    +   VV+VS G  H VA+    
Sbjct: 133 AVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEE--EVVQVSCGWRHTVAITGKS 190

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTI 391
            V++WG+G  G LGHGD +D+ +P         + ++ LSV    C  I
Sbjct: 191 NVFSWGRGTSGQLGHGDILDRNMP---------VLIEALSVDGSACEQI 230



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
           QI  G  H L ++ N  V S G +  G LG G       SF  R+  P+   VVQVS   
Sbjct: 123 QIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDH--SFPQRVKLPAEEEVVQVSCGW 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEAL--KGVPCKQV 221
            H   +     VF+ G  +S   GH D  +R +  P L+EAL   G  C+Q+
Sbjct: 181 RHTVAITGKSNVFSWGRGTSGQLGHGDILDRNM--PVLIEALSVDGSACEQI 230


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A   SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A   SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|224118330|ref|XP_002317792.1| predicted protein [Populus trichocarpa]
 gi|222858465|gb|EEE96012.1| predicted protein [Populus trichocarpa]
          Length = 337

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 17/279 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T+          P    S+ +LAA  +C  
Sbjct: 50  FPLATNPS-IVLHVLTACNLDPQDLAKLEATN--------FPPDNELSISELAALDMCQK 100

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLRFL + E       +     Q   G  H++ + 
Sbjct: 101 RAIFKPMAPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERS-----QAIAGPGHSIAVT 155

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           SN +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +G+V+ 
Sbjct: 156 SNGAVYSFGSNSSGQLGHG-TTEEEWRPRQIRSLRGIRIIQAAAGPGRTMLISDAGRVYA 214

Query: 187 CGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T      
Sbjct: 215 FGKDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGND 274

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           G++GH    +   P  +    E   VVQIAAG  Y+LA+
Sbjct: 275 GRIGHQTEPNDVEPHPLLGALENIPVVQIAAGYCYLLAL 313



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 4/111 (3%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q  AGP + +AVT NG VYSFGS S+  LGHG   +E +PR I++ R  GI +++ +AG 
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLR--GIRIIQAAAGP 200

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDK--TLPEPLSSLKSHLAVQGL 381
              + +  +G VY +GK   G   +G +  K  T P+ + SLK+   VQ +
Sbjct: 201 GRTMLISDAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAV 251



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 5/152 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q  AG   +  +T  G V++ GSN+ GQLGHG T +   P+ I  L  +  ++Q AAGP 
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGI-RIIQAAAGPG 201

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + ++  G VY+FG  S     +G Q  ++   P+ +++   K I VV+   G+     
Sbjct: 202 RTMLISDAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVESL--KNIFVVQAVIGNFFTAV 259

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L   G VYT+  G  G +GH  E +   P PL
Sbjct: 260 LSREGRVYTFSWGNDGRIGHQTEPNDVEPHPL 291


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G  +   
Sbjct: 208 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDD-QKVEFLACGGCHTAL 266

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSG 342
           +T +G+V++FG G    LGH    +EL+PR +      G  V +++ G +H +A +  +G
Sbjct: 267 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLAYVSDTG 324

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPL 369
            V+++G G  G LG+G   ++ +P P+
Sbjct: 325 KVFSFGSGKEGQLGNGGTRNQLIPRPM 351



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 127 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 186

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRP 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N       GH         P
Sbjct: 187 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKES---P 243

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +EAL     + +  G   T  LT  G V T G   +GQLGH  T +   P+ +  L  
Sbjct: 244 SCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL-- 301

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR +
Sbjct: 302 VGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPM 351



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 4/161 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N  GQLG G       TP+ +  L  V  +VQI+AG 
Sbjct: 151 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGV-PLVQISAGE 209

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +A++ +G VYS+G      LG G  +++  P  I+    + +  +  + G  H   L
Sbjct: 210 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFL--ACGGCHTALL 267

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             SG V+T+G G  G LGH    ++  P  ++ L  +   Q
Sbjct: 268 TKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQ 308



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 328
           +++QI  G  + LA++  G ++++G   +  LG G        P  ++     G+ +V++
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL--SGVPLVQI 205

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SAG+ H +AL  SG VY+WG+  CG LG G   +K  P  + +L
Sbjct: 206 SAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEAL 249


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P++VE L G+P  Q++AG
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 318 KAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDN-QKVEFLACGGSHTALL 376

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G+V++FG+G +  LGH    +EL+PR +      G  V +++ G +H +A  S  G 
Sbjct: 377 TKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTEL--AGNRVTQIACGRQHTLAYVSDLGK 434

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           V+++G G  G LG+G   ++ +P P+ 
Sbjct: 435 VFSFGSGKEGQLGNGGTHNQLIPLPMK 461



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 4/205 (1%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +         +   S   +VQ+SA +
Sbjct: 259 IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGK 318

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +++ G N     G   T+   F P L+EAL     + +  G + T  LT
Sbjct: 319 AHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDF-PSLIEALDNQKVEFLACGGSHTALLT 377

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVY 291
             G V T G+  HGQLGH  T +   P+ +  L     V QIA G  + LA V+  G V+
Sbjct: 378 KDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAG-NRVTQIACGRQHTLAYVSDLGKVF 436

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ 316
           SFGSG    LG+G  H++L P  ++
Sbjct: 437 SFGSGKEGQLGNGGTHNQLIPLPMK 461



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 4/161 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N HGQLG G        P+ +  L  +  +VQI+AG 
Sbjct: 260 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGI-PLVQISAGK 318

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +A++ +G +YS+G      LG G    +  P  I+    + +  +  + G  H   L
Sbjct: 319 AHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFL--ACGGSHTALL 376

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              G V+T+G G  G LGH    ++  P  ++ L  +   Q
Sbjct: 377 TKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQ 417



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 3/106 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 329
           ++QI  G  + LA++  G ++++G   +  LG G Q   +  P+ ++     GI +V++S
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENL--SGIPLVQIS 315

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           AG  H +AL  SG +Y+WG+   G LG G    K  P  + +L + 
Sbjct: 316 AGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQ 361


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 27/267 (10%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ S+ +V +CG + CG LG         P   Q +    ++        
Sbjct: 25  QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDL------- 77

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +S  + H+  V   G+VF  G  S    G  +     F P  V+AL G+   QV+ G  
Sbjct: 78  -LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHY 136

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + G+N+HGQLG G + L + +P+ +  LE +  + Q+AAG ++  A++
Sbjct: 137 HSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGI-PLAQVAAGGAHSFALS 195

Query: 286 GNGVVYSFGSGSN----FCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G   SFG GSN      L G+       +PR+I   +  G  VV +S G EH   L  
Sbjct: 196 LSGT--SFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELG--VVYISCGSEHTAVLTQ 251

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPE 367
            G V+T+G    G LGHG   +K  P+
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEKRGPQ 278



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 117/237 (49%), Gaps = 17/237 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G+   G LG G       +  ++   +   ++QVS    H
Sbjct: 78  LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYH 137

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + Q GQVF+ G+NS    G          P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 138 SLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLS 197

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+   +    P+SI  L+E+G VV I+ G  +   +T +G V+
Sbjct: 198 GTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELG-VVYISCGSEHTAVLTQDGKVF 256

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYT 346
           +FG  S+  LGHG   ++  P+ ++     GI   V ++  G  H +      YVYT
Sbjct: 257 TFGDNSSGQLGHGPTAEKRGPQLVE-----GIDGLVSQIDCGSYHTLV-----YVYT 303



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 9/216 (4%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A + Q ++ E H+  +L  G V  CGDNS    G R       RP L++AL+ +    ++
Sbjct: 21  AELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRK-RPGLIQALETLNVDLLS 79

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP  +  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGI-KIIQVSCGHYHS 138

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSL--EGIPLAQVAAGGAHSFALSL 196

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLK 373
           SG  + WG    G L   G+   +    P  + +LK
Sbjct: 197 SGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALK 232



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 3/164 (1%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           EA  G   +Q  +G   +  L   G VH CG N+ GQLG      R  P  I  LE + +
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETL-N 74

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  ++ G  + LAV   G V+++G+GS   LG GE   EL    ++     GI +++VS 
Sbjct: 75  VDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSC 133

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLK 373
           G  H +AL   G V++WG    G LG G E + +  P+ + SL+
Sbjct: 134 GHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLE 177



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++        N P+  ++PR + ALK +    ++ G   T  
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N+ GQLGHG T ++  P+ +  ++  G V QI  G  + L  V     
Sbjct: 249 LTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGID--GLVSQIDCGSYHTLVYVYTTRQ 306

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 307 VISFGRG 313


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A   SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G  +   
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDD-QKVEFLACGGCHTAL 271

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSG 342
           +T +G+V++FG G    LGH    +EL+PR +      G  V +++ G +H +A +  +G
Sbjct: 272 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLAYVSDTG 329

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPL 369
            V+++G G  G LG+G   ++ +P P+
Sbjct: 330 KVFSFGSGKEGQLGNGGTRNQLIPRPM 356



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 132 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 191

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRP 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N       GH         P
Sbjct: 192 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKE---SP 248

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +EAL     + +  G   T  LT  G V T G   +GQLGH  T +   P+ +  L  
Sbjct: 249 SCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL-- 306

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR +
Sbjct: 307 VGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPM 356



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 4/161 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N  GQLG G       TP+ +  L  V  +VQI+AG 
Sbjct: 156 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGV-PLVQISAGE 214

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +A++ +G VYS+G      LG G  +++  P  I+    + +  +  + G  H   L
Sbjct: 215 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFL--ACGGCHTALL 272

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             SG V+T+G G  G LGH    ++  P  ++ L  +   Q
Sbjct: 273 TKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQ 313



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 328
           +++QI  G  + LA++  G ++++G   +  LG G        P  ++     G+ +V++
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL--SGVPLVQI 210

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SAG+ H +AL  SG VY+WG+  CG LG G   +K  P  + +L
Sbjct: 211 SAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEAL 254


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G ++ G LG  G E    V    I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVP-RNIKSLSDIQIVQVACGYF 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A   S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGTTSNRKSPFPVK 342



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   RP  V AL       V+ G   T  L  +G V+  G    GQLG   T
Sbjct: 65  QLGHEKSRK---RPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGT 121

Query: 254 LDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EEYTRVPRNIKSLSDI-QIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +++AG  H   L  SG V+ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQIIKSLL--GIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVTVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G       G   T      PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P+ I  L  +    QIAAG ++   +T +G V+ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGI-PFAQIAAGGAHSFVLTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L  ++  Q
Sbjct: 278 STAHEINPRKVFELMGNIVTQ 298



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFVLTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGTTSNRKSPFPVK 342


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G V+ +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 277 TPVVVEKDRI 286



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 4/233 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +  L  +   VF+ G +    LG+G      V +      S   V++V+    H+  
Sbjct: 83  SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 142

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+PI R R+   L+      +  G   +  +   G 
Sbjct: 143 LTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQSKVVVNIACGQMCSMAVVNTGE 201

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N +GQLG G + ++PTP  +A L+ +  V ++A G ++ L +T  G VY++G+ 
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 260

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           S   LG G + ++  P  +   + + I +    +      A    G+VY WG+
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS-AAKTQGGHVYMWGQ 312



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 4/152 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 36  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 94

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 95  EVFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 153

Query: 349 KGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQ 379
               G +G G   ++ +P  ++  L+S + V 
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQSKVVVN 185



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           S A L+ V       +  + +L  T N  ++  G+    CLG G+    ++PR + +   
Sbjct: 14  SEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSG 73

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           K I  +   +G  H+V   + G V+TWG      LG+G      +P  +S+
Sbjct: 74  KKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHIST 123


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 121/278 (43%), Gaps = 20/278 (7%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPSAAHVVQV 168
           G   +  G +HT  I+ S  ++S G     V  LGHG E++  +           +V  V
Sbjct: 340 GFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYV 399

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H A V  SGQ+FT GD S    GH D  R    PR V+ L G+   +V  G+  T
Sbjct: 400 ACGPWHTAVVASSGQLFTFGDGSFGALGHGD-RRSTSVPREVKILSGLIVTKVACGVWHT 458

Query: 229 GFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             L             + RG V T G    GQLGHGD   +  P+ +  L    ++ Q+A
Sbjct: 459 AALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSN-ENICQVA 517

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G S  +++T  G VY+ GS +   LG+         R         +    ++ G  HV
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVE--EIACGSYHV 575

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             L S   +YTWGKG  G LGHG   +K  P  +  LK
Sbjct: 576 AVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLK 613



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 24/275 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 173
           G YH    +   VF  G S+C  +  G   +   +   +  P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGK 296

Query: 174 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HA  V + G++F+ G+              + +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 233 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQL 415

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 338
           ++FG GS   LGHG++     PR ++     G+ V +V+ G  H  AL            
Sbjct: 416 FTFGDGSFGALGHGDRRSTSVPREVKIL--SGLIVTKVACGVWHTAALVEVTNEASEAEV 473

Query: 339 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             S G V+TWG G  G LGHGD   + LPE + SL
Sbjct: 474 GSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISL 508



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 25/229 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS---FTRI--NFPSA 162
           +  G +HT ++++S  +F+ G    G LGHG       P   + +S    T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHT 458

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLL-PECVISLSNENICQVA 517

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 277
            G + T  LT  GHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGN------PTAKGNFPARVEGDIVEASVEEIACG 571

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    +Y++G G N  LGHG   ++ +P  +   + K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAI 620


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 20/246 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F+ G +  G L  G +  +C +   +       V  +S+  NH+  V Q GQ+F CG  
Sbjct: 17  LFAWGRNKDGELSIGNQK-KCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSA 75

Query: 191 SSFCCGHRDTNRPIFRPR--LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                G  D N+P + P+  LV+A+KG+   QV  G   T  L   G V+  G   H +L
Sbjct: 76  LHGKLGFEDANQPSY-PKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG----SNFCLGHG 304
           G         P  I  L++  ++VQI  G  +  A++ NG +Y++G G    +   LGHG
Sbjct: 135 GS----KAGKPARIETLKQ--TIVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHG 188

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
             +D   P+ ++       ++V+ S G  H++ALD  G +++WG G  G  G G+  D  
Sbjct: 189 HLNDVETPQIVKD------NIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSL 242

Query: 365 LPEPLS 370
           LP+ + 
Sbjct: 243 LPKKVK 248



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 31/261 (11%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I++G  H+ +++ +  +F CGS+L G LG           F  +       V QV+  + 
Sbjct: 53  ISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDY 112

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +L +GQV+  G        H+       +P  +E LK     Q+  G   +  L+ 
Sbjct: 113 HTLCLLDNGQVYAWGGTL-----HKKLGSKAGKPARIETLKQTIV-QIGCGDFHSAALSA 166

Query: 234 RGHVHTCGSN----THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            G ++T G        GQLGHG   D  TP+ +       ++V+ + G  +M+A+  +G 
Sbjct: 167 NGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD-----NIVKFSCGGYHMMALDKDGE 221

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGI-------------HVVRVSAGDEHV 335
           ++S+GSG     G GE  D L P+ ++  F +K I              +  +S G  H 
Sbjct: 222 LWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHS 281

Query: 336 VALDSSGYVYTWGKGYCGALG 356
           + L + G VY  G    G LG
Sbjct: 282 LLLSNKGIVYACGYAQHGQLG 302



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 63/285 (22%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSA 170
           Q+ TG YHTL L+ N  V++ G +L   LG     P   + +  T         +VQ+  
Sbjct: 106 QVATGDYHTLCLLDNGQVYAWGGTLHKKLGSKAGKPARIETLKQT---------IVQIGC 156

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKGVPCKQV 221
            + H+A +  +G ++T G       G RD NR          +  P++V   K    K  
Sbjct: 157 GDFHSAALSANGDLYTWG------GGGRDYNRGQLGHGHLNDVETPQIV---KDNIVKFS 207

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI---------------APLE 266
             G +    L   G + + GS  +G+ G G+  D   PK +                  +
Sbjct: 208 CGGYHMMA-LDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNK 266

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR------ 320
           +  ++ +I+ G  + L ++  G+VY+ G           QH +L  +A +   +      
Sbjct: 267 QESTIKEISLGGHHSLLLSNKGIVYACGYA---------QHGQLGIKATENQNKFQLVIG 317

Query: 321 -KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
             G  +V+++AG  H + L S   VYT G    G LG GD   +T
Sbjct: 318 ISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRT 362



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 22/189 (11%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVV----- 166
           ++ + G YH + L  +  ++S GS + G  G G  + +      +INF +  H++     
Sbjct: 204 VKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINF-NQKHIIIDDIF 262

Query: 167 ----------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKG 215
                     ++S   +H+  +   G V+ CG       G + T N+  F+  LV  + G
Sbjct: 263 VQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQ--LVIGISG 320

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
               Q+ AG N +  LT    V+TCG N  GQLG GD   R     I  LE+   + Q+ 
Sbjct: 321 KTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQR-RIKQLF 379

Query: 276 AGPSYMLAV 284
           AG ++  A+
Sbjct: 380 AGGNHSWAL 388



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 36/249 (14%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSS----LCGVLGHG----PETTQCVSFTRINFPSAAH 164
           +QI  G +H+  +S N  +++ G        G LGHG     ET Q V           +
Sbjct: 152 VQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVK---------DN 202

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRP------------IFRPRL 209
           +V+ S    H   + + G++++ G       G    +D+  P            I     
Sbjct: 203 IVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIF 262

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           V+  +    K+++ G + +  L+ +G V+ CG   HGQLG   T ++   + +  +    
Sbjct: 263 VQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISG-K 321

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           ++VQIAAG ++ + +T +  VY+ G      LG G+     Q   I    ++ I   ++ 
Sbjct: 322 TIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIK--QLF 379

Query: 330 AGDEHVVAL 338
           AG  H  AL
Sbjct: 380 AGGNHSWAL 388



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ L S+S V++CG +  G LG G   ++   +TRINF     + Q+ A  
Sbjct: 324 VQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRT-QYTRINFLEQRRIKQLFAGG 382

Query: 173 NHAAFVLQSGQ 183
           NH+  ++   Q
Sbjct: 383 NHSWALIDYNQ 393


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +    V IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 277 APVIVEKDRI 286



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 89

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  +  V ++ G    +A+ ++G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-AVNIACGQMCSMAVVNTGEVYVWGYN 208

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 209 GNGQLGLGSSGNQPTPCRIAALQ 231


>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
          Length = 409

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 13/179 (7%)

Query: 207 PRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPK 260
           P+ +E   KG    QV+AG      +T+   ++T       ++  GQLGHGDT     PK
Sbjct: 11  PQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPK 70

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQ 316
            +  L+++ +V Q++ G  + + VT +G VYSFGS    CLG+G+Q D       P  + 
Sbjct: 71  RVEALDKI-AVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVS 129

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            F  +   V++VS GD HV+AL   G VYTWG G  G LG G E D + P+ +++   H
Sbjct: 130 FFVNR--PVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRH 186



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 11/206 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEAL 213
           F      +QVSA   H A V    +++T  +           GH DT      P+ VEAL
Sbjct: 17  FTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDT-ASYKAPKRVEAL 75

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGS 270
             +   QV+ G +FT  +T  G V++ GS+ +G LG+GD  D        S+        
Sbjct: 76  DKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFFVNRP 135

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q++ G ++++A+T  G VY++GSG    LG G + D   P+ + T  R GI  V   A
Sbjct: 136 VLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVH--A 193

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALG 356
           G +    L ++G + + G      LG
Sbjct: 194 GPDGSFILRTNGRLQSCGSNEHNKLG 219



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++  +V+S GS   G LG+G     E   C S + ++F     V+QVS
Sbjct: 82  QVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCAC-SPSLVSFFVNRPVLQVS 140

Query: 170 ASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             + H   + + G+V+T G         G  D +     P+ V        + V AG + 
Sbjct: 141 CGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSS---PQKVATRGRHGIRSVHAGPDG 197

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGD----------TLDRPTP---KSIAPLEEVGSVVQI 274
           +  L   G + +CGSN H +LG             + D P      ++ PL +  ++V +
Sbjct: 198 SFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKY-NIVAV 256

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G ++   + G G + +FGS     LG G+   E +   + T    G +V +V+ GD  
Sbjct: 257 SPGQTHSAVIDGFGHLITFGSNKYGQLGVGD-FKERKTVTMVTGSLVGKNVTKVACGDRS 315

Query: 335 VVALDSSGYVYTWGKGYCGALG 356
            V   S   +Y+ G    G LG
Sbjct: 316 TVIATSDNLIYSCGFSENGRLG 337



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-----LGHGEQHDEL 310
           + TP+ +    +  S +Q++AG ++   VT    +Y++ +          LGHG+     
Sbjct: 8   KLTPQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYK 67

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            P+ ++   +  I V +VS G++  V +   G VY++G  Y G LG+GD+ D
Sbjct: 68  APKRVEALDK--IAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGD 117



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 20/205 (9%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H + L     V++ GS   G LG G E     S  ++       +  V A  
Sbjct: 137 LQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHS-SPQKVATRGRHGIRSVHAGP 195

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK------------- 219
           + +  +  +G++ +CG N     G     + +   R  +    +PC              
Sbjct: 196 DGSFILRTNGRLQSCGSNEHNKLGLNSCAKGL---RSKQVSYDIPCNYNFTTVKPLSKYN 252

Query: 220 --QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              V+ G   +  +   GH+ T GSN +GQLG GD  +R T   +       +V ++A G
Sbjct: 253 IVAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKVACG 312

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLG 302
               +  T + ++YS G   N  LG
Sbjct: 313 DRSTVIATSDNLIYSCGFSENGRLG 337


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A   SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|255083701|ref|XP_002508425.1| predicted protein [Micromonas sp. RCC299]
 gi|226523702|gb|ACO69683.1| predicted protein [Micromonas sp. RCC299]
          Length = 261

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 10/253 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L  + ++ + G +  G LGHG  T   V    R+N  S   V Q++   NH   V + G 
Sbjct: 11  LDPDGALMTWGLASSGELGHGGWTPIEVDIPRRVNSMSGVKVTQIATGANHTVVVSEGGG 70

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++TCG       GH   N      RL EAL+G+   +  AG + T  LT  G V + G+ 
Sbjct: 71  LWTCGRGRHGQLGHGHFNDAGPLQRL-EALRGMNVTRAVAGGSHTVCLTDCGSVWSWGAC 129

Query: 244 THGQLGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            +GQLG GD  +  TPK+   ++      +   +V+ AAG ++   +T  G V + GS S
Sbjct: 130 RYGQLGLGDDWEGRTPKNGVWIKVPCACGDRCKIVRAAAGGNHSAVLTACGAVMTTGSNS 189

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG+         +++ R  G  +  V  G++H  A+  SG +Y WG+G  G LG 
Sbjct: 190 YGQLGHGDIKKRYAFTRVESLR--GSRLATVDCGEDHTGAVGDSGRLYLWGRGDWGQLGS 247

Query: 358 GDEIDKTLPEPLS 370
           GD      P P++
Sbjct: 248 GDGRSHWSPAPVN 260



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 7/212 (3%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
           VS   +H A +   G + T G  SS   GH   T   +  PR V ++ GV   Q+  G N
Sbjct: 1   VSCGASHCAALDPDGALMTWGLASSGELGHGGWTPIEVDIPRRVNSMSGVKVTQIATGAN 60

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  ++  G + TCG   HGQLGHG   D    + +  L  + +V +  AG S+ + +T 
Sbjct: 61  HTVVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGM-NVTRAVAGGSHTVCLTD 119

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RKGIHVVRVSAGDEHVVALDSS 341
            G V+S+G+     LG G+  +   P+     +          +VR +AG  H   L + 
Sbjct: 120 CGSVWSWGACRYGQLGLGDDWEGRTPKNGVWIKVPCACGDRCKIVRAAAGGNHSAVLTAC 179

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G V T G    G LGHGD   +     + SL+
Sbjct: 180 GAVMTTGSNSYGQLGHGDIKKRYAFTRVESLR 211



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 14/118 (11%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVS 329
           ++ G S+  A+  +G + ++G  S+  LGHG       P  +   RR     G+ V +++
Sbjct: 1   VSCGASHCAALDPDGALMTWGLASSGELGHGG----WTPIEVDIPRRVNSMSGVKVTQIA 56

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
            G  H V +   G ++T G+G  G LGHG   D     PL  L+   A++G++V   V
Sbjct: 57  TGANHTVVVSEGGGLWTCGRGRHGQLGHGHFNDAG---PLQRLE---ALRGMNVTRAV 108


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 18/239 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++ +V+S G +    LG G    +    T     + ++ V ++A ++H   + + G V
Sbjct: 142 LKTDGTVWSWGCNTYATLGLGDRVDR---NTPQKVEALSNAVALAAGDDHTLALTRDGSV 198

Query: 185 FTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           ++ G N +   G    H DT      P+ VEA+  V    + A    T  LT  G+V + 
Sbjct: 199 WSWGWNYNGQLGLGSIHEDTYEST--PKKVEAISNV--TAIAAQTYHTQALTRDGNVWSW 254

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSN  GQLG GD  DR  P+ +   E + +VV I AG ++ LAVT +G V+++G  S   
Sbjct: 255 GSNDFGQLGMGDQNDRDAPQKV---EALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQ 311

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
           LG G+  D   P+ ++       +VV ++AG +H +AL   G V+ WGK   G +G G+
Sbjct: 312 LGLGDLWDRDAPQKVEALS----NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGE 366



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 14/177 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSI 262
           P+ VEAL       + AG + T  LT  G V + G N +GQLG    H DT    TPK +
Sbjct: 170 PQKVEALSNAVA--LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTY-ESTPKKV 226

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
              E + +V  IAA   +  A+T +G V+S+GS     LG G+Q+D   P+ ++      
Sbjct: 227 ---EAISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALS--- 280

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +VV ++AG  H +A+   G V+ WG+   G LG GD  D+  P+ + +L + +A+ 
Sbjct: 281 -NVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVEALSNVVAIN 336



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 49/289 (16%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++++ G +  G LG G    Q +    +     ++VV ++  E H+  V   G V++ G 
Sbjct: 8   ALWTWGGNDDGRLGIGATGDQNLP---VQLSYLSNVVSLAGGEKHSLAVSGDGSVWSWGS 64

Query: 190 NSS----------------------------FCCGHRDTNRPIFRPRLVEALKGVP---- 217
           NS+                            F     D    I      +  K  P    
Sbjct: 65  NSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAPGLSG 124

Query: 218 ----CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                  + AG  F+  L   G V + G NT+  LG GD +DR TP+ +   E + + V 
Sbjct: 125 CGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKV---EALSNAVA 181

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSA 330
           +AAG  + LA+T +G V+S+G   N  LG G  H+   E  P+ ++       +V  ++A
Sbjct: 182 LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS----NVTAIAA 237

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              H  AL   G V++WG    G LG GD+ D+  P+ + +L + +A+ 
Sbjct: 238 QTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAIN 286



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 38/183 (20%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G + T G N  G+LG G T D+  P  ++ L    +VV +A G  + LAV+G+G V
Sbjct: 3   VTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLS---NVVSLAGGEKHSLAVSGDGSV 59

Query: 291 YSFGS-------------------------GSNFCL-------GHGEQHDELQPRAIQT- 317
           +S+GS                         G +F L       G G+  D+      +T 
Sbjct: 60  WSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTA 119

Query: 318 --FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                 G  V  ++AG +  + L + G V++WG      LG GD +D+  P+ + +L + 
Sbjct: 120 PGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSNA 179

Query: 376 LAV 378
           +A+
Sbjct: 180 VAL 182


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 14/242 (5%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            QI  G+  T ++ N+ +V +CG    G LG G  +    S T I+      V Q++ S  
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQG-NSDDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H   V +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQLSCGFKHSAV 1952

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G T ++  P  +  LE  ++G V   A G ++ L V+ +G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV---ACGLNHTLCVSADG 2009

Query: 289  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
              V++FG G    LG G    +  P  I+    +G  + +V+ G +  VAL   G V+TW
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKAL--QGHVIKKVACGTQFSVALSKYGKVFTW 2067

Query: 348  GK 349
            G+
Sbjct: 2068 GQ 2069



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 12/195 (6%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++  G N   C G R    P+  P    +      +Q+  G N T  +   G V  CG  
Sbjct: 1805 LWGSGRNGQMCEGGRGAFVPVRVPSFSCS------QQIVCGQNCTFVVQNNGTVLACGEG 1858

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNGVVYSFGSGSNFC 300
            ++G+LG G++ D  +  +I+ ++    V Q+A       + LAVT +G V+S+G G    
Sbjct: 1859 SYGRLGQGNSDDLHSLTAISSIQGF-VVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGK 1917

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGHG    + +PR I+    +G  V+++S G +H   + + G ++T+G G  G LG G  
Sbjct: 1918 LGHGNSDRQRRPRQIEAL--QGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTT 1975

Query: 361  IDKTLPEPLSSLKSH 375
             +K +P  + +L+SH
Sbjct: 1976 TNKKVPTRVVALESH 1990



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 8/228 (3%)

Query: 153  SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            +F  +  PS +   Q+   +N    V  +G V  CG+ S    G  +++  +     + +
Sbjct: 1821 AFVPVRVPSFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDD-LHSLTAISS 1879

Query: 213  LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            ++G    Q+   +   G    +T  G V + G   +G+LGHG++  +  P+ I  L+   
Sbjct: 1880 IQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-E 1938

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+Q++ G  +   VT +G +++FG+G    LG G   ++  P  +       I  V  +
Sbjct: 1939 EVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV--A 1996

Query: 330  AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
             G  H + + + G  V+ +G G  G LG G+ + K LP  + +L+ H+
Sbjct: 1997 CGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHV 2044



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 1/108 (0%)

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG- 331
            QI  G +    V  NG V + G GS   LG G   D     AI + +   +  +  S G 
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            D H +A+  SG V++WG G  G LGHG+   +  P  + +L+    +Q
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQ 1942



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 6/141 (4%)

Query: 116  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G  HTL +S   ++V++ G    G LG G    + +  T+I       + +V+    
Sbjct: 1995 VACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLP-TKIKALQGHVIKKVACGTQ 2053

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  + + G+VFT G       G  DT      +P+ V +L G   + V  G   T  LT
Sbjct: 2054 FSVALSKYGKVFTWGQER--LIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLT 2111

Query: 233  IRGHVHTCGSNTHGQLGHGDT 253
              G V   GSN+ GQLG G T
Sbjct: 2112 SDGDVWGWGSNSEGQLGLGHT 2132


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 132/275 (48%), Gaps = 12/275 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 132/275 (48%), Gaps = 12/275 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L++   V
Sbjct: 239 LRTQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 20/262 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHR-DTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           V+ CG N     GH   T RP   P  L+  L+     Q+  G   +  L+  G V + G
Sbjct: 61  VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            N  GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 121 DNDCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGS 174

Query: 296 GSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
                LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  C
Sbjct: 175 NIYGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNC 232

Query: 353 GALGHGDEIDKTLPEPLSSLKS 374
           G LG  DE +++ P  L +L++
Sbjct: 233 GQLGLNDETNRSYPTQLKTLRT 254



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 98  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 155

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 225
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 156 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 212

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 213 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 271

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 272 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 329

Query: 345 YTWGKGYCGALGHGDEIDKTLPE 367
           Y +G G  G LG        LP+
Sbjct: 330 YAFGLGSSGQLGTRSTKSLMLPQ 352



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 13/266 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 171
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +  P      ++Q+   
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  L
Sbjct: 104 SRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           T  G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G
Sbjct: 164 TSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSG 222

Query: 289 VVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T
Sbjct: 223 AV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 278

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
            G G  G LGHG   ++ LP  +  L
Sbjct: 279 CGAGAYGQLGHGFSSNEMLPRMVMEL 304



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 151 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 210

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 211 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 268

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 269 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 326

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 327 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 354


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 27/273 (9%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ S+ +V SCG +  G LG         P+  Q +   R+         
Sbjct: 38  QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVEL------- 90

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            VS  + H+  V   G+VF  G  S    G  +       P+ ++ L G+   QV+ G  
Sbjct: 91  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNY 149

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + GSN+HGQLG G  L  + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGI-PLAQVAAGGAHSFALS 208

Query: 286 GNGVVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G   SFG GSN        G        +PR++   +  G  VV +S G EH   L  
Sbjct: 209 LSGT--SFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLG--VVYISCGHEHTAVLTQ 264

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +G V+T+G   CG LGH    +KT P+ +  ++
Sbjct: 265 NGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIE 297



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 9/220 (4%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    + Q ++ E H+  +L  G V +CGDNS    G R   R   +P+ ++AL+ +  +
Sbjct: 31  PGGPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREE-QPKPIQALETLRVE 89

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGP 278
            V+ G   +  +  +G V   G+ + GQLG G+  +    P+ I  L  +  ++Q++ G 
Sbjct: 90  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGI-KIIQVSCGN 148

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            + LA++ +G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  A
Sbjct: 149 YHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL--DGIPLAQVAAGGAHSFA 206

Query: 338 LDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
           L  SG  + WG    G L   G    +    P  +S+LK+
Sbjct: 207 LSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKT 246



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G E     S  R+       + QV+A  
Sbjct: 142 IQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGG 201

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++       +N P+  ++PR V ALK +    ++ G   T  
Sbjct: 202 AHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAV 261

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N+ GQLGH  T ++  P+ +  +E  G V QI  G  + LA V   G 
Sbjct: 262 LTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIE--GLVSQIDCGSYHTLAYVYTTGQ 319

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 320 VVSFGRG 326


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G  +   
Sbjct: 183 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDD-QKVEFLACGGCHTAL 241

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSG 342
           +T +G+V++FG G    LGH    +EL+PR +      G  V +++ G +H +A +  +G
Sbjct: 242 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLAYVSDTG 299

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPL 369
            V+++G G  G LG+G   ++ +P P+
Sbjct: 300 KVFSFGSGKEGQLGNGGTRNQLIPRPM 326



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 102 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 161

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--P 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N    CG         +  P
Sbjct: 162 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRND---CGQLGLGHTYNKDSP 218

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +E L     + +  G   T  LT  G V T G   +GQLGH  T +   P+ +  L  
Sbjct: 219 SCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL-- 276

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR +
Sbjct: 277 VGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPM 326



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 4/161 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N  GQLG G       TP+ +  L  V  +VQI+AG 
Sbjct: 126 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGV-PLVQISAGE 184

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +A++ +G VYS+G      LG G  +++  P  I+T   + +  +  + G  H   L
Sbjct: 185 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFL--ACGGCHTALL 242

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             SG V+T+G G  G LGH    ++  P  ++ L  +   Q
Sbjct: 243 TKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQ 283



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 328
           +++QI  G  + LA++  G ++++G   +  LG G        P  ++     G+ +V++
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL--SGVPLVQI 180

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SAG+ H +AL  SG VY+WG+  CG LG G   +K  P  + +L
Sbjct: 181 SAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETL 224


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 16/283 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2714

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2715 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2773

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQ----IAAGPSYMLAV 284
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G        +A G ++ LAV
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV 2833

Query: 285  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            + +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+
Sbjct: 2834 STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGH 2891

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            VYT+G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 2892 VYTFGQDRLIGLPEGRARNHNRPQQVPVL-AGVVIEDVAVGAE 2933



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 117/246 (47%), Gaps = 14/246 (5%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 2718 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 2776

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-------VTAGLNFTGFLTI 233
             G++FT G+      G  +T+     P  V AL+G    Q       V  GLN T  ++ 
Sbjct: 2777 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVST 2835

Query: 234  RGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G  V   G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+
Sbjct: 2836 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYT 2894

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            FG      L  G   +  +P+ +      G+ +  V+ G EH +AL S+G VY WG    
Sbjct: 2895 FGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 2952

Query: 353  GALGHG 358
            G LG G
Sbjct: 2953 GQLGLG 2958



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 2655 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 2714

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 2715 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 2772

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 2773 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 2811



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 20/236 (8%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            +Q++ G  H+ ++ S+  +F+ G+   G LG G       PE    +   +I   +    
Sbjct: 2762 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG-QAWNKS 2820

Query: 166  VQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              V+   NH   V   G +   F  GD      G+         P+ V+ L G+  K+V 
Sbjct: 2821 YSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVA 2877

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYM 281
             G  F+  LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + 
Sbjct: 2878 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHT 2935

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            LA+   G VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 2936 LALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 2989



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 116  ITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+    
Sbjct: 2823 VACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQ 2881

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T  
Sbjct: 2882 FSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTLA 2937

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 2938 LASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 2995


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 128/281 (45%), Gaps = 32/281 (11%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S     +  G+   G+LGHG E +  +   +++ P    HV  V+  
Sbjct: 349 VACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIP-KKVSGPMEGMHVSYVACG 407

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D +  +  PR VEAL+G    +V  G+  T  +
Sbjct: 408 PWHTAVVTSAGQLFTFGDGTFGALGHGD-HSSMSIPREVEALRGQRTMRVACGVWHTAAV 466

Query: 232 T---------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
                             G + T G    G+LGHGD   R  P+S+  L    S  Q+A 
Sbjct: 467 VELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINE-SFCQVAC 525

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           G +  +A+T +G VY+ GS     LG     G+    ++ +   +F      V  V+ G 
Sbjct: 526 GHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSF------VEEVACGS 579

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L S   VYTWGKG  G LGHGD   +  P  +  LK
Sbjct: 580 YHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLK 620



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 29/268 (10%)

Query: 131 VFSCGSSLC-GVLGHGPETTQCVSFTRIN--FPSAAH------VVQVSASENHAAFVLQS 181
           VF  G  +  G++G G       S T+I+   P A        V  ++    HA  V + 
Sbjct: 251 VFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKK 310

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+VF+ G+      GH      +  P+L++AL G+  + V  G   +  +T+ G ++T G
Sbjct: 311 GEVFSWGEECGSRLGH-GVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWG 369

Query: 242 SNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             TH  G LGHG       PK ++   E   V  +A GP +   VT  G +++FG G+  
Sbjct: 370 DGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFG 429

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---------------DSSGYV 344
            LGHG+      PR ++  R  G   +RV+ G  H  A+                SSG +
Sbjct: 430 ALGHGDHSSMSIPREVEALR--GQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKL 487

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +TWG G  G LGHGD+  + +P+ +++L
Sbjct: 488 FTWGDGDKGRLGHGDKEPRLVPQSVTAL 515



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 4/175 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G V + G     +LGHG  +D   PK I  L 
Sbjct: 283 PKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALC 342

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G++    LGHG +     P+ + +   +G+H
Sbjct: 343 GM-NIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKV-SGPMEGMH 400

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           V  V+ G  H   + S+G ++T+G G  GALGHGD    ++P  + +L+    ++
Sbjct: 401 VSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMR 455



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 19/227 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +HT +++++  +F+ G    G LGHG  ++  +    +        ++V+    H
Sbjct: 404 VACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIP-REVEALRGQRTMRVACGVWH 462

Query: 175 AAFVLQ---------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            A V++               SG++FT GD      GH D   P   P+ V AL      
Sbjct: 463 TAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGD-KEPRLVPQSVTALINESFC 521

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G N +  LT  G V+T GS  +GQLG     D   P  +        V ++A G  
Sbjct: 522 QVACGHNLSVALTTSGRVYTMGSAVYGQLG-SPVADGKIPTLVEGKIANSFVEEVACGSY 580

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  +T    VY++G G+N  LGHG+      P  +   + K +  V
Sbjct: 581 HVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
           H  ++ MS   ++E L       +R +R    V H++ +VE     M  ++    +   S
Sbjct: 433 HGDHSSMSIPREVEALRG-----QRTMRVACGVWHTAAVVEL----MIASSSFESSGSSS 483

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +  +F+ G    G LGHG +  + V  +     + +   QV+   N +  +  SG+V+T 
Sbjct: 484 SGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINES-FCQVACGHNLSVALTTSGRVYTM 542

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G       G    +  I  P LVE  +     ++V  G      LT +  V+T G  T+G
Sbjct: 543 GSAVYGQLGSPVADGKI--PTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNG 600

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           QLGHGD   R TP  +  L++   V  +  G ++  A++
Sbjct: 601 QLGHGDNDHRNTPTLVDFLKD-KQVKNVVCGLNFTAAIS 638



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++  V++ GS++ G LG      +  +       ++  V +V+    H A +    +V
Sbjct: 533 LTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANS-FVEEVACGSYHVAVLTSKTEV 591

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV----HTC 240
           +T G  ++   GH D N     P LV+ LK    K V  GLNFT  +++   V    H+ 
Sbjct: 592 YTWGKGTNGQLGHGD-NDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSI 650

Query: 241 GSNTHGQLG 249
            S  H Q G
Sbjct: 651 CSGCHNQFG 659


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A   SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 18/207 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G++FT G+ S    GH    R + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGH-GVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G + T G  TH  G LGHG  +    PK I+ PLE +  V  +  GP +   VT    +
Sbjct: 350 AGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTTTRQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDKDNVAYPREVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSASV 466

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG ++TWG G    LGHGD+  +  P
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKP 493



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 20/275 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +  +F+ G      G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  + Q+FT GD +    GH D +   + PR VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAY-PREVESLSGLRTIAVACGVWHTAAV 454

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L E  +  ++A G S 
Sbjct: 455 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEY-NFQKVACGHSL 513

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V + GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGQVCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAVLTS 571

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              VYTWGKG  G LGHGD  D+  P  + +LK  
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDR 606



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           +T G +HT L++ +  +F+ G    GVLGHG       P   + +S  R           
Sbjct: 392 VTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHT 451

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V  +++ A+  + SG++FT GD      GH D   P  +P  V AL     ++V 
Sbjct: 452 AAVVEVIVTQSSAS--VSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIEYNFQKVA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +        V +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGQVCTMGSTVYGQLGNPQS-DGKLPCFVEDKLLGECVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++T + +  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDR--HVKYIACGSNYTAAI 621



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 7/206 (3%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +    +  G+     +T +G + T G  + G+LGHG   D   P
Sbjct: 264 TRADLLLPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G ++++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 374
              +G+ V  V+ G  H   + ++  ++T+G G  G LGHGD+ +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRT 441

Query: 375 HLAVQGLSVLAEVCPTIVQEDTRSCS 400
                G+   A V   IV + + S S
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSASVS 467


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A   SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 18/257 (7%)

Query: 129 SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           SS+++ G S  G  G G       PE  Q +            VV  +    ++AFV + 
Sbjct: 37  SSLYTWGRSDLGQTGSGRDQNSTAPEPVQALQ--------GKDVVHAAGGSYNSAFVTRD 88

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+++T G N +   G +     +  P  V AL+      V  G      +   GH+   G
Sbjct: 89  GELYTTGSNDARQLGVKGREVAL-EPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWG 147

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           SN +GQLG G+         +          ++AAG ++ LA+T +G VYSFG GS   L
Sbjct: 148 SNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGAL 207

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG+ ++  +P  +Q    + I  V ++AG+    A+  SG V+TWG+   G LG+G+  
Sbjct: 208 GHGDVNNRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFG 265

Query: 362 DKTLPEPLSSLKSHLAV 378
           +  LP+P+  ++  + V
Sbjct: 266 NAFLPQPVPGIEQAVQV 282



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 9/245 (3%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           G Y++  ++ +  +++ GS+    LG  G E    +   R++     +V  V+  + H  
Sbjct: 78  GSYNSAFVTRDGELYTTGSNDARQLGVKGREV--ALEPIRVSALEMNNVHGVACGQGHML 135

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            V+ +G +   G N     G  +      +PR+++ ++G    +V AG   +  LT  G 
Sbjct: 136 AVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQ 195

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G  + G LGHGD  +R  P  +  L    ++V IAAG  +  AV+ +G V+++G  
Sbjct: 196 VYSFGEGSFGALGHGDVNNRAKPTLVQALWPE-AIVSIAAGEYFSAAVSLSGRVFTWGRN 254

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG+GE  +   P+ +    +     V+V+ GD H +AL   G VYTWG    G LG
Sbjct: 255 KYGQLGNGEFGNAFLPQPVPGIEQ----AVQVACGDHHCIALTRWGEVYTWGLHSSGQLG 310

Query: 357 HGDEI 361
            G  +
Sbjct: 311 QGSNL 315



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G Y +  +S S  VF+ G +  G LG+G       +F     P     VQV+  +
Sbjct: 230 VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGN---AFLPQPVPGIEQAVQVACGD 286

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFRPRLVEALKGVPCKQVTAGLN 226
           +H   + + G+V+T G +SS   G          N  +  P  V++L     +QV+AG  
Sbjct: 287 HHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGAR 346

Query: 227 FTGFLTIRGHVHTCGSNTHGQL 248
            + F++    +   G+N  GQL
Sbjct: 347 HSFFVSPGEQLWGAGANDEGQL 368


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V + + G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 7/262 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQG 380
               +  P  +  L   +  Q 
Sbjct: 278 STSHEINPRKVFELMGSIVTQA 299



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 144/285 (50%), Gaps = 18/285 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4075

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4076 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4134

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS------VVQIAAGPSYML 282
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G       +  +A G ++ L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194

Query: 283  AVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            AV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   
Sbjct: 4195 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKD 4252

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            G VYT+G+     L  G   +   P+ +  L + + ++ ++V AE
Sbjct: 4253 GQVYTFGQDRLIGLPEGRARNHNRPQQVPVL-AGVVIEDVAVGAE 4296



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 141/323 (43%), Gaps = 62/323 (19%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT----FRRK------------------------ 321
           V+SFG G N  LGHG+ +   +P+ I+     F RK                        
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA 642

Query: 322 ---------------------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
                                   +V +S GD H +AL     VY WG    G  G G+ 
Sbjct: 643 CLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 361 IDK-TLPEPLSSLKSHLAVQGLS 382
               T P+ +S L   +A+Q +S
Sbjct: 703 TGPITKPKKVSGLDG-IAIQQVS 724



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 16/248 (6%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4079 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4137

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ---------VTAGLNFTGFL 231
             G++FT G+      G  +T+     P  V AL+G    Q         V  GLN T  +
Sbjct: 4138 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAV 4196

Query: 232  TIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +  G  V   G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G V
Sbjct: 4197 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGQV 4255

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+FG      L  G   +  +P+ +      G+ +  V+ G EH +AL S+G +Y WG  
Sbjct: 4256 YTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALTSTGDIYAWGSN 4313

Query: 351  YCGALGHG 358
              G LG G
Sbjct: 4314 SEGQLGLG 4321



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4016 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4075

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4076 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4133

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4134 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4172



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H +AL   G  V+++G G  G LGHGD      P+ + +L+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 20/237 (8%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            +Q++ G  H+ ++ S+  +F+ G+   G LG G       PE    +   +I       +
Sbjct: 4123 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSI 4182

Query: 166  V-QVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            +  V+   NH   V   G +   F  GD      G+         P+ V+ L G+  K+V
Sbjct: 4183 ICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKV 4239

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
              G  F+  LT  G V+T G +    L  G   +   P+ +  L   G V++ +A G  +
Sbjct: 4240 ACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEH 4297

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             LA+T  G +Y++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4298 TLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4352



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 11/179 (6%)

Query: 116  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+    
Sbjct: 4186 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQ 4244

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  + + GQV+T G +          R+ NRP    + V  L GV  + V  G   T  
Sbjct: 4245 FSVALTKDGQVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTLA 4300

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT  G ++  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4301 LTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4358



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           S   CG  ++  PI +P+ V  L G+  +QV+AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAG 726


>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 1401

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 16/274 (5%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + +  G +++L L S+ +V++ G +  G LG G  T +   +T +   +   V
Sbjct: 63  VQNLTGVVAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNR---YTPVQVQNLTGV 119

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++A   H+  +   G V+  G N     G    TNR    P  V+ L GV       G
Sbjct: 120 VAIAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNR--TTPVQVKNLTGVVAVAAGGG 177

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            +    L   G V   G N +GQLG G T++R TP  +   + +  VV IAAG S+ LA+
Sbjct: 178 HSLA--LKSDGTVWAWGYNGYGQLGDGTTMNRYTPVQV---QNLTGVVAIAAGSSHSLAL 232

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++G+     LG G   +   P  +Q        VV ++AG+EH +AL S G V
Sbjct: 233 KSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLT----DVVAIAAGNEHSLALKSDGTV 288

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +TWG  Y G LG G   ++  P  + +L   +A+
Sbjct: 289 WTWGWNYSGQLGDGTTTNRYTPVQVQNLTGVVAI 322



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 127/269 (47%), Gaps = 16/269 (5%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + I  G  H+L L S+ +V++ G +  G LG G  T +    T +   +   V
Sbjct: 113 VQNLTGVVAIAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRT---TPVQVKNLTGV 169

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAG 224
           V V+A   H+  +   G V+  G N     G   T NR  + P  V+ L GV    + AG
Sbjct: 170 VAVAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTTMNR--YTPVQVQNLTGVVA--IAAG 225

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  L   G V   G+N +GQLG G T +R TP  +  L +V   V IAAG  + LA+
Sbjct: 226 SSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDV---VAIAAGNEHSLAL 282

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++G   +  LG G   +   P  +Q        VV ++AG  H +AL S G V
Sbjct: 283 KSDGTVWTWGWNYSGQLGDGTTTNRYTPVQVQNLT----GVVAIAAGGGHSLALKSDGTV 338

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           + WG    G LG G   D+  P  +S L 
Sbjct: 339 WAWGNNDWGELGDGTRTDRHTPVQVSGLN 367



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 19/110 (17%)

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           GS V+IAAG +  LA+  +G V+++G                 P  +Q        VV V
Sbjct: 32  GSQVKIAAGGARSLAIKSDGTVWAWGG---------------TPVPVQNLT----GVVAV 72

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            AG  + +AL S G V+ WG  Y G LG G   ++  P  + +L   +A+
Sbjct: 73  EAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAI 122


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 2202

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 2203 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 2261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 2262 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 2320

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 2321 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 2378

Query: 350  GYCGALGHGDEIDKTLP 366
               G  G+G  I    P
Sbjct: 2379 NDHGQQGNGTTIVNRKP 2395



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 16/276 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S ++ V+S G    G LGHG     C + 
Sbjct: 3109 LLESIQH------VFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETP 3161

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       ++ ++    H+A +  +GQ++T G       GH D+   + +P+L+E L 
Sbjct: 3162 KLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELV 3220

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G      L I    +V + G   +G+LG G +     PK I  L  +G V+
Sbjct: 3221 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VI 3279

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G 
Sbjct: 3280 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGS 3337

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             H VA    G V+TWG    G L  GD+    +  P
Sbjct: 3338 LHCVACSDEGEVFTWGDNDEGQL--GDDTTNAIQRP 3371



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 12/228 (5%)

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 215
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2083 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2139

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2140 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 2198

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 331
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 2199 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 2256

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ
Sbjct: 2257 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQ 2304



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 10/212 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAG 224
            + V++   H   +     V++ G+      GH   NR     P+L+EAL+G     +  G
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKLIEALQGYEIIDIACG 3178

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYM 281
               +  +T  G ++T G   +G+LGHGD+ D+  PK I  L  VG  V+ +A  +G +  
Sbjct: 3179 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL--VGYKVIDVACGSGDAQT 3236

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L +T +  V+S+G G    LG G       P+ I++    G+ V++V  G +  VAL  S
Sbjct: 3237 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGLGVIKVECGSQFSVALTRS 3294

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            G VYTWGKG    LGHG       P+ +++L+
Sbjct: 3295 GSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQ 3326



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 10/230 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S    VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3062 STLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKK 3120

Query: 221  --VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
              V +G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G 
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGG 3179

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +
Sbjct: 3180 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 3239

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
                 V++WG G  G LG G      +P+ + SL       GL V+   C
Sbjct: 3240 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLA------GLGVIKVEC 3283



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 7/144 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3086

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3087 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146

Query: 352  CGALGHGDEIDKTLPEPLSSLKSH 375
             G LGHG+ +    P+ + +L+ +
Sbjct: 3147 DGKLGHGNRLACETPKLIEALQGY 3170



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +A  VVQ+      +  + ++G+V
Sbjct: 2263 LTDEGWVFSWGDGDFGKLGRGG-SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEV 2321

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  +++ + +P ++E+LK      V  G      +T  G V+  G N 
Sbjct: 2322 WTWGKGDYFRLGH-GSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDND 2380

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T+    P  +  LE+V  + ++A G S+ +A T
Sbjct: 2381 HGQQGNGTTIVNRKPALVHGLEDV-HINRVACGSSHSIAWT 2420



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASENHAAFV 178
            ++   L  + SV++ G      LGHG  T + V    ++       ++ ++    H    
Sbjct: 3286 QFSVALTRSGSVYTWGKGDYHRLGHG--TGEHVRRPKKVAALQGKKIISIATGSLHCVAC 3343

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
               G+VFT GDN     G  DT   I RPRLV AL+G     V  G
Sbjct: 3344 SDEGEVFTWGDNDEGQLGD-DTTNAIQRPRLVSALQGKKITNVACG 3388


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia stuttgartiensis]
          Length = 1413

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 16/268 (5%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            QI+ G YHTL L  + +V++CG++  G LG G    +    T +       V+ ++  + 
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS---TPVQVSGLTDVIAIAGGDY 1099

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +     V+  G NS    G    TNR I  P  V  L  +    +  G   T  L 
Sbjct: 1100 HTIALKSDNTVWAWGSNSYGQLGDGTITNRSI--PTPVTYLTNIIA--IAGGYVHTIALK 1155

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V   G N +GQLG G T +R TP  ++ L +V   + IA    + +A+  +G V++
Sbjct: 1156 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV---IAIAGEYVHTVALKSDGTVWA 1212

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G      LG G   +   P  +         V+ ++ G  H +AL S G V+TWG    
Sbjct: 1213 WGYNGYGQLGDGSTTNRSTPVQVSGLT----DVIAIAGGYVHTIALKSDGTVWTWGWNNS 1268

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            G LG G  I++  P  +S L   +A+ G
Sbjct: 1269 GQLGDGTTINRLTPVQVSGLTDAIAIAG 1296



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 16/269 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ L S+ +V++ G++  G LG G  T +    T +       V+ ++   
Sbjct: 196 IAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRS---TPVQVSGLTDVIAIAGGY 252

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   +   G V+  GDN     G    TNR I  P  V  L  V    +  G   T  L
Sbjct: 253 AHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSI--PVKVGGLSDVIA--IAGGNAHTIAL 308

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N  GQLG G T +R TP  ++ L +V   + IA G S+ + +  +G V+
Sbjct: 309 KSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADV---IAIAGGYSHTIVLRSDGTVW 365

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G      LG G   +   P  +         V+ ++ G  H +A+ S G ++ WG  +
Sbjct: 366 TWGHNEGGQLGDGSTTNRSTPVQVSGLA----DVIAIAGGVYHTIAVKSDGTMWAWGYNW 421

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            G LG G  I+ + P  ++ L   +A+ G
Sbjct: 422 YGQLGDGTTINSSTPVQVNGLTDVIAIAG 450



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 17/298 (5%)

Query: 86   CNGNWKRVLRFLQSVEHSSDI-VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLG 143
            C  NW   L    ++  S+ + V      + I  G YHT+ L S+++V++ GS+  G LG
Sbjct: 1063 CGANWNGQLGDGTTINRSTPVQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1122

Query: 144  HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR 202
             G  T + +  T + + +  +++ ++    H   +   G V+  G N     G    TNR
Sbjct: 1123 DGTITNRSIP-TPVTYLT--NIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNR 1179

Query: 203  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
                P  V  L  V    +      T  L   G V   G N +GQLG G T +R TP  +
Sbjct: 1180 S--TPVQVSGLTDVIA--IAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQV 1235

Query: 263  APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            + L +V   + IA G  + +A+  +G V+++G  ++  LG G   + L P  +       
Sbjct: 1236 SGLTDV---IAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLT--- 1289

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
               + ++ GD H +AL S   V+ WG    G LG G  I++  P  +S L   +A+ G
Sbjct: 1290 -DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTDAIAIAG 1346



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 120/265 (45%), Gaps = 18/265 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  HT+ L S+ +V++ G +  G LG G  T + +    +     + V+ ++   
Sbjct: 246 IAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIP---VKVGGLSDVIAIAGGN 302

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   +   G V+  GDN     G    TNR    P  V  L  V    +  G + T  L
Sbjct: 303 AHTIALKSDGTVWAWGDNEGGQLGDGSTTNRS--TPVKVSGLADVIA--IAGGYSHTIVL 358

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V T G N  GQLG G T +R TP  ++ L +V   + IA G  + +AV  +G ++
Sbjct: 359 RSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLADV---IAIAGGVYHTIAVKSDGTMW 415

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G      LG G   +   P  +         V+ ++ G  H +A+ S G V+TWG  Y
Sbjct: 416 AWGYNWYGQLGDGTTINSSTPVQVNGLT----DVIAIAGGYYHTIAMKSDGAVWTWGFNY 471

Query: 352 CGALGHGDEIDKTLP--EPLSSLKS 374
            G LG G   +++ P    LS +KS
Sbjct: 472 YGQLGDGSITNRSTPAQRSLSGMKS 496



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 20/270 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G YHTL L  + +V++ G++  G LG    T +    T +       V+ ++    
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRS---TPVQVSGLTDVIAIAGGAY 203

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           H   +   G V+  G+N     G     D + P+    L + +       +  G   T  
Sbjct: 204 HTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIA------IAGGYAHTIA 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V   G N  G+LG G T +R  P  +  L +V   + IA G ++ +A+  +G V
Sbjct: 258 LKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDV---IAIAGGNAHTIALKSDGTV 314

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G      LG G   +   P  +         V+ ++ G  H + L S G V+TWG  
Sbjct: 315 WAWGDNEGGQLGDGSTTNRSTPVKVSGLA----DVIAIAGGYSHTIVLRSDGTVWTWGHN 370

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
             G LG G   +++ P  +S L   +A+ G
Sbjct: 371 EGGQLGDGSTTNRSTPVQVSGLADVIAIAG 400



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 17/295 (5%)

Query: 89  NWKRVLRFLQSVEHSSDI-VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP 146
           NW   L    + + S+ + V      + I  G YHT+ L S+ +V++ G +  G LG G 
Sbjct: 618 NWNSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGT 677

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIF 205
              +      I       V+ ++  + H   +   G V+T G N      G   TNR   
Sbjct: 678 TINRSTPVQVIGL---TDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS-- 732

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            P  V+ L  +    +  G   +  L   G V   G N +GQLG G T D  TP  ++ L
Sbjct: 733 TPVQVKGLADIIA--IAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGL 790

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            ++   + IA G  + +A+  +G V+++G      LG G   +   P  +         V
Sbjct: 791 TDI---IAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLT----DV 843

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           + V+A   H +AL S G V+TWG+   G LG G   +++LP  +  L   +A+ G
Sbjct: 844 IAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTDVIAIAG 898



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 7/165 (4%)

Query: 216  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            +P  Q++AG   T  L   G V  CG+N +GQLG G T++R TP  ++ L +   V+ IA
Sbjct: 1039 LPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD---VIAIA 1095

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  + +A+  +  V+++GS S   LG G     +  R+I T      +++ ++ G  H 
Sbjct: 1096 GGDYHTIALKSDNTVWAWGSNSYGQLGDG----TITNRSIPTPVTYLTNIIAIAGGYVHT 1151

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            +AL S G V+ WG    G LG G   +++ P  +S L   +A+ G
Sbjct: 1152 IALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAG 1196



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 7/165 (4%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  Q++AG   T  L   G V T G+N +GQLG   T +R TP  ++ L +   V+ IA
Sbjct: 143 IPRSQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD---VIAIA 199

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  + +A+  +G V+++G+     LG G   D   P  +         V+ ++ G  H 
Sbjct: 200 GGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT----DVIAIAGGYAHT 255

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           +AL S G V+ WG    G LG G   ++++P  +  L   +A+ G
Sbjct: 256 IALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAG 300



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 7/165 (4%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  Q++AG   T  L   G V   G+N + QLG G T D  TP  ++ L +    + IA
Sbjct: 591 MPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDA---IAIA 647

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  + +A+  +G V+++G  ++  LG G   +   P  +         V+ ++ GD H 
Sbjct: 648 GGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLT----DVIAIAGGDYHT 703

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           +AL S G V+TWG  Y G LG G   +++ P  +  L   +A+ G
Sbjct: 704 IALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAG 748



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 106/245 (43%), Gaps = 16/245 (6%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G  HT+ L S+ +V++ G +  G LG G  T +    T +       V+ ++   
Sbjct: 1142 IAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRS---TPVQVSGLTDVIAIAGEY 1198

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   G V+  G N     G    TNR    P  V  L  V    +  G   T  L
Sbjct: 1199 VHTVALKSDGTVWAWGYNGYGQLGDGSTTNRS--TPVQVSGLTDVIA--IAGGYVHTIAL 1254

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
               G V T G N  GQLG G T++R TP  ++ L +    + IA G  + +A+  +  V+
Sbjct: 1255 KSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDA---IAIAGGDYHTIALKSDNTVW 1311

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            ++GS S   LG G   + L P  +          + ++ GD H +AL S   V+ WG   
Sbjct: 1312 AWGSNSYGQLGDGTTINRLTPVQVSGLT----DAIAIAGGDYHTIALKSDNTVWAWGSNS 1367

Query: 352  CGALG 356
             G LG
Sbjct: 1368 YGQLG 1372



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 16/264 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ L S+ +V++ G +  G LG G  T +    T +     A ++ ++   
Sbjct: 694 IAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS---TPVQVKGLADIIAIAGGY 750

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+  G N     G   T   +  P  V  L  +    +  G   T  L 
Sbjct: 751 VHSIALKSDGTVWAWGYNGYGQLGDGSTTDHL-TPVQVSGLTDIIA--IAGGYIHTIALK 807

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N  GQLG G T +  TP  ++ L +V   + + A   + +A+  +G V++
Sbjct: 808 SDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDV---IAVTARLYHTIALKSDGTVWT 864

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      LG G   +   P  +         V+ ++ G  H +AL S G V+ W  GY 
Sbjct: 865 WGRNIYGQLGDGSTTERSLPVQVIGLT----DVIAIAGGYYHTIALKSDGAVWAW--GYN 918

Query: 353 GALGHGDEIDKTLPEPLSSLKSHL 376
           G    G+   K    P+ SL+  +
Sbjct: 919 GNNQLGNWSTKNSSTPVRSLRYDM 942



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G  HT+ L S+ +V++ G +  G LG G   T     T +        + ++  +
Sbjct: 1242 IAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDG---TTINRLTPVQVSGLTDAIAIAGGD 1298

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NR--PIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H   +     V+  G NS    G   T NR  P+    L +A+       +  G   T 
Sbjct: 1299 YHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTDAIA------IAGGDYHTI 1352

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS--IAPLEEVGSVVQIA 275
             L     V   GSN++GQLG   T +  TP    ++P+   G+ + I 
Sbjct: 1353 ALKSDNTVWAWGSNSYGQLGDVSTANSLTPAQCLLSPIVSTGTAINIG 1400


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 16/220 (7%)

Query: 164 HVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+L+ A  G    
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKLISAFCGKQAG 551

Query: 220 Q----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           Q    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+ +A
Sbjct: 552 QRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVA 610

Query: 276 --AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
             +G +  LAVT NG V+S+G G    LG G       P+ ++    + + VV+V  G +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL--QDLDVVKVRCGSQ 668

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VAL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASE 172
           + G ++  L +   V+S G    G LGHG     E  + +S       +   VV ++   
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLIS-AFCGKQAGQRVVHIACGS 561

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L 
Sbjct: 562 TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 233 I--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G V + G   +G+LG G +    TPK +  L+++  VV++  G  + +A+T +G V
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DVVKVRCGSQFSVALTKDGQV 679

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG  
Sbjct: 680 YSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 351 YCGALGHGDEIDKTLPEP 368
                 H D +  T PEP
Sbjct: 738 --DQCQHFDTLHATKPEP 753



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   +S               P+LV+ L      ++ A 
Sbjct: 454 VSQIACAEKRFLILSRSGRVYTQAYSSD-----------ALAPQLVQGLVSRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG 641


>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
          Length = 938

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 105/214 (49%), Gaps = 7/214 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 29  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG 88

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 89  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVL 147

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG 
Sbjct: 148 TKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGL 205

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           +Y +G G  G LG G   +   P P   +K H A
Sbjct: 206 IYAFGCGAKGQLGTGHTCNVKCPSP---VKGHWA 236



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 4/172 (2%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           G   T   +  PRL++ L      QV+ G      L   G   T G N+HGQLG G    
Sbjct: 7   GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 66

Query: 256 RPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
             T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  
Sbjct: 67  SQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCH 125

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH    D+  P
Sbjct: 126 VKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 175



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 5/137 (3%)

Query: 244 THGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           + GQLG   T D    P+ I  L +  +++Q++ G  + LA+  +G  +++G  S+  LG
Sbjct: 2   SDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 60

Query: 303 HGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G++   +  P+ +++   +GI + +V+AG  H  AL  SG V+ WG    G LG  DE 
Sbjct: 61  LGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 118

Query: 362 DKTLPEPLSSLKSHLAV 378
           D+  P  +  L++   V
Sbjct: 119 DRESPCHVKLLRTQKVV 135



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +       VV +S  E 
Sbjct: 84  QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR-ESPCHVKLLRTQKVVYISCGEE 142

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G   T   + 
Sbjct: 143 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVP 201

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G    GQLG G T +   P  +
Sbjct: 202 SSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 231


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 23/260 (8%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 133 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 189

Query: 180 QSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             G V+  G+N     G     HR T      P  V  L+GV    V  G   +  L   
Sbjct: 190 ADGTVWAWGNNGYGQLGNGSTAHRAT------PVQVPGLQGV--VAVAGGYMHSLALCAD 241

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G
Sbjct: 242 GTVWAWGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWG 298

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           +     LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G 
Sbjct: 299 NNGFGQLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQ 354

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG+G       P P+  L +
Sbjct: 355 LGNGSFSSSARPAPVQGLGA 374



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 127/277 (45%), Gaps = 24/277 (8%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S  H +  V+     G + +  G  H+L L ++ +V++ G +  G LG+G   T   S T
Sbjct: 209 STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPT 265

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALK 214
            +  P  + VV V+A   H+  +   G V+  G+N     G    T R   +P  VE L+
Sbjct: 266 PVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLR 323

Query: 215 GVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            V    V     F   L +R  G + + G+N  GQLG+G       P   AP++ +G+V 
Sbjct: 324 EV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVT 376

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
            +AAG  + +AV  +G V+++G      LGH     E  P      R  G+   V V+AG
Sbjct: 377 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAG 431

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             H +++ + G ++ WG    G LG  +     +P P
Sbjct: 432 FYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVPAP 468



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 20/204 (9%)

Query: 182 GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 142 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 193

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 194 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 250

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 251 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 306

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQG 380
                 +T P  +  L+  +AV G
Sbjct: 307 EAVSTQRTKPGRVEGLREVVAVAG 330



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 7/160 (4%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 126 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 182

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 183 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 238

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            + G V+ WG    G LG+G  +    P P+  L   ++V
Sbjct: 239 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSV 278



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           R TP   A  ++ G V  +A G  Y LA+  +G V++ GS S   LG+G       PR +
Sbjct: 113 RATPAQAA--DQRG-VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPV 169

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
               R     V V+AG  H +AL + G V+ WG    G LG+G    +  P  +  L+  
Sbjct: 170 PGLSR----AVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV 225

Query: 376 LAVQG 380
           +AV G
Sbjct: 226 VAVAG 230


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Takifugu rubripes]
          Length = 3883

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 11/242 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 417 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
            H   +   G+VF+ GD      GH ++    + P++++  L        +AG   +  +
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIIQGPLFSKIVVSASAGYRHSAAV 535

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G  V
Sbjct: 536 TKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG---QVACGSSHTIAVAQDGRTV 592

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 593 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 650

Query: 351 YC 352
            C
Sbjct: 651 SC 652



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 130/273 (47%), Gaps = 32/273 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASEN 173
           HTL I+ +  VFS G    G LGHG       P+  Q   F++I       VV  SA   
Sbjct: 478 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKI-------VVSASAGYR 530

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V + G+++T G+      GH D+      P LV+ + GV   QV  G + T  +  
Sbjct: 531 HSAAVTKDGELYTWGEGDFGRLGHSDSQSRNM-PTLVKDISGV--GQVACGSSHTIAVAQ 587

Query: 234 RGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 291
            G  V + G   +G+LGHGDT     PK I  L   G ++ ++ AG    LA+T  G V+
Sbjct: 588 DGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVF 645

Query: 292 SFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           ++G GS  CLG G  +   L+PR ++      I  + +S GD H +AL     VY WG  
Sbjct: 646 AWGCGS--CLGCGSSETTSLRPRFVEDLSITKI--IDISCGDSHCLALSHENEVYAWGNN 701

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
             G  G G         P++  K  L ++G+S+
Sbjct: 702 TMGQCGQGHT-----STPITRPKKVLGLEGVSI 729



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 110/235 (46%), Gaps = 6/235 (2%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LGHG    Q     +I       VVQ++    H+A V   G++
Sbjct: 3120 LTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVVTADGKL 3178

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHTCGSN 243
            FT G   S   G R T+  +  P  V AL+G    QV+ GLN T  L++ G  V   G  
Sbjct: 3179 FTFGSGESGRLGQRSTSNKML-PERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDG 3237

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             +G+LG G +  +  P+ +  L   G + ++  G  + + V  +G VY+FG      L  
Sbjct: 3238 DYGKLGAGSSTAKYYPQKVEQLCNKG-MKKVCCGAQFSVVVACDGHVYTFGQERLIGLPD 3296

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
                +   P+ + +   +G+ +  ++ G EHV+AL S+G VY WG    G LG G
Sbjct: 3297 SMLKNRSNPQVVPSL--EGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLG 3349



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 383 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 439

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 440 SYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKL 499

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG    +  P+ IQ      I VV  SAG  H  A+   G +YTWG+G  G LGH D  
Sbjct: 500 GHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQ 558

Query: 362 DKTLP 366
            + +P
Sbjct: 559 SRNMP 563



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 8/263 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 171
            Q+  G+  + LI SN  V + G    G LG G      V      F       +V    S
Sbjct: 3054 QVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGS 3113

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3114 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3172

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 290
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3173 TADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3231

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++FG G    LG G    +  P+ ++    KG+  V   A    VVA D  G+VYT+G+ 
Sbjct: 3232 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACD--GHVYTFGQE 3289

Query: 351  YCGALGHGDEIDKTLPEPLSSLK 373
                L      +++ P+ + SL+
Sbjct: 3290 RLIGLPDSMLKNRSNPQVVPSLE 3312



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 10/175 (5%)

Query: 203  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            P   P L +       +QV  G N +  +   G V   G   +G+LG G++ D   P  I
Sbjct: 3043 PTLAPSLSQT------QQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTII 3096

Query: 263  APLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +  +   V  +V       + +A+T  G V+S+G G    LGHG    + +P+ I+    
Sbjct: 3097 SAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEAL-- 3154

Query: 321  KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            +G  VV+++ G  H   + + G ++T+G G  G LG     +K LPE +++L+ +
Sbjct: 3155 QGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGY 3209



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  GSN+  QL  G       PK      +  +   I AG     +V+ +G V + G G
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQT---IEAGQYCTFSVSTDGSVKACGKG 439

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 355
           S   LG G+ +++  P+ +     + I  V  S G D H +A+   G V++WG G  G L
Sbjct: 440 SYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKL 499

Query: 356 GHGDEIDKTLPE 367
           GHG+   +  P+
Sbjct: 500 GHGNSATQKYPK 511



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   VF+ G   C  LG G   T  +    +   S   ++ +S  ++H   +    +V
Sbjct: 638 LTSAGQVFAWGCGSC--LGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEV 695

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+N+   CG   T+ PI RP+ V  L+GV  +Q+TAG
Sbjct: 696 YAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAG 735



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q++ G  HTL++S    +V++ G    G LG G  T +     ++       + +V    
Sbjct: 3213 QVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYP-QKVEQLCNKGMKKVCCGA 3271

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  V   G V+T G       G  D+   NR    P++V +L+G+  + +  G     
Sbjct: 3272 QFSVVVACDGHVYTFGQER--LIGLPDSMLKNRS--NPQVVPSLEGLFIEDIAVGCEHVL 3327

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  G N+ GQLG G       P  I  L+   ++ QI+AG  +  A T    
Sbjct: 3328 ALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITALQG-KNIKQISAGRCHSSAWTTPST 3386

Query: 290  VYSFGSGSNFCLG 302
              + G   N  LG
Sbjct: 3387 SKNSGGPGNLQLG 3399



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G     L P+  Q F         + AG     ++ + G V   GK
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFS----DAQTIEAGQYCTFSVSTDGSVKACGK 438

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           G  G LG GD  +++LP+ L  L+ H  ++ +S
Sbjct: 439 GSYGRLGLGDSNNQSLPKKL-VLEPHRNIKKVS 470


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 119/271 (43%), Gaps = 20/271 (7%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPSAAHVVQV 168
           G   +  G +HT  I+ S  ++S G     V  LGHG E++  +           +V  V
Sbjct: 353 GFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDV 412

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H A V  SGQ+FT GD +    GH D  R    PR VE+L G+   +V  G+  T
Sbjct: 413 ACGPWHTAVVASSGQLFTFGDGTFGALGHGD-RRSTSVPREVESLIGLIVTKVACGVWHT 471

Query: 229 GFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             +             + RG V T G    GQLGHGD   +  P+ +  L    ++ Q+A
Sbjct: 472 AAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTN-ENICQVA 530

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G S  ++ T  G VY+ GS +   LG+         R         +    ++ G  HV
Sbjct: 531 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVE--EIACGSYHV 588

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             L S   +YTWGKG  G LGHG+  +K  P
Sbjct: 589 AVLTSKSEIYTWGKGLNGQLGHGNVENKREP 619



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 31/250 (12%)

Query: 101 EHSSDIVETSAGNMQ------ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
           E S  I +   G++Q      +  G +HT ++++S  +F+ G    G LGHG   +  V 
Sbjct: 391 ESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVP 450

Query: 154 ----------FTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
                      T++       A VV+V+   + A      GQVFT GD      GH D +
Sbjct: 451 REVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDND 510

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  P  V +L      QV  G + T   T RGHV+T GS  +GQLG+      PT K 
Sbjct: 511 TKLL-PECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKG 563

Query: 262 IAPLEEVGSVVQ-----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P    G +V+     IA G  ++  +T    +Y++G G N  LGHG   ++ +P  + 
Sbjct: 564 NFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVG 623

Query: 317 TFRRKGIHVV 326
             R K +  +
Sbjct: 624 FLREKQVKAI 633



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G    G+LGHG   D   PK I+ + 
Sbjct: 291 PKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVR 350

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            +G    +A G  +  A+T +G +YS+G G++    LGHG +     P+ + T   +G++
Sbjct: 351 GLG-FKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRV-TGDLQGLY 408

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           V  V+ G  H   + SSG ++T+G G  GALGHGD    ++P  + SL
Sbjct: 409 VSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESL 456


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 129/277 (46%), Gaps = 25/277 (9%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V   +D+V  SAG+        H+L L ++ +V + G +  G LG G  T +    + + 
Sbjct: 392 VPDLTDVVALSAGDS-------HSLALRTDGTVRAWGVNYSGQLGDGTTTHR---LSPVQ 441

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGV 216
            P    VV +SA  NH   +  +G V+  G NS    G   T      PRL  V+ L   
Sbjct: 442 VPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTT-----PRLSPVQMLGLT 496

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               ++AG   +  +   G V   GSN+ GQLG G T  R TP  +  L +V   V ++A
Sbjct: 497 NVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDV---VALSA 553

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G S+ LA+  +G V+++GS S+  LG G       P  +         VV +SAG  H +
Sbjct: 554 GDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGL----TDVVALSAGGAHSL 609

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           AL + G V+ WG  Y G LG G    +  P  +S+L 
Sbjct: 610 ALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLT 646



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 24/271 (8%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H+L L ++ +V++ G +  G LG G   T     + +  P    VV +SA +
Sbjct: 349 VALSAGYSHSLALRTDGTVWAWGYNSLGQLGDG---TTIPRPSPVQVPDLTDVVALSAGD 405

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +H+  +   G V   G N S   G   T     P+  P L + +       ++AG N T 
Sbjct: 406 SHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDVVA------LSAGGNHTL 459

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 287
            L   G V   GSN+ GQLG G T    TP+ ++P++ +G  +VV ++AG  + LAV  +
Sbjct: 460 ALRTNGTVWAWGSNSDGQLGDGTT----TPR-LSPVQMLGLTNVVALSAGYYHSLAVHTD 514

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++GS S+  LG G     L P  +         VV +SAGD H +AL + G V+ W
Sbjct: 515 GTVWAWGSNSDGQLGDGTTTHRLTPVQVPGL----TDVVALSAGDSHSLALRTDGTVWAW 570

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G      LG G    +  P  +  L   +A+
Sbjct: 571 GSNSSSQLGDGTTTPRGSPVQVPGLTDVVAL 601



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 149/337 (44%), Gaps = 28/337 (8%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRC----NGNWKRVLRFLQSVEHS 103
           L P +   L D+ A      HS+       V     N      +G   R L  +Q V   
Sbjct: 137 LAPVQVPGLTDVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATRRLSPVQ-VPGL 195

Query: 104 SDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +D+V  SAG        YH+L + ++ +V++ GS+  G LG G  T +    + +     
Sbjct: 196 TDVVALSAGG-------YHSLAVRTDGTVWAWGSNFSGQLGDGTATPR---LSPVQVSGL 245

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            +VV +SA +++   +   G V+  G NS    G   T  P   P  V  L  V    ++
Sbjct: 246 TNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGD-GTTTPRLSPVQVPGLTNVVA--LS 302

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
           AG + +  L   G V   G N +GQLG+G     PT +S + P+  +  VV ++AG S+ 
Sbjct: 303 AGYSHSLALRTDGTVWAWGYNYNGQLGNG----IPTQRSPSIPVFGLIDVVALSAGYSHS 358

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+  +G V+++G  S   LG G       P  +         VV +SAGD H +AL + 
Sbjct: 359 LALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVPDL----TDVVALSAGDSHSLALRTD 414

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G V  WG  Y G LG G    +  P  +  L   +A+
Sbjct: 415 GTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDVVAL 451



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L ++ +V++ G +  G LG G  T +    + +  P   +VV +SA  +H+  +  
Sbjct: 257 YTLALRTDGTVWAWGYNSYGQLGDGTTTPR---LSPVQVPGLTNVVALSAGYSHSLALRT 313

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  G N +   G+     P  R   +     +    ++AG + +  L   G V   
Sbjct: 314 DGTVWAWGYNYNGQLGN---GIPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAW 370

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N+ GQLG G T+ RP+P  +  L +V   V ++AG S+ LA+  +G V ++G   +  
Sbjct: 371 GYNSLGQLGDGTTIPRPSPVQVPDLTDV---VALSAGDSHSLALRTDGTVRAWGVNYSGQ 427

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G     L P  +         VV +SAG  H +AL ++G V+ WG    G LG G  
Sbjct: 428 LGDGTTTHRLSPVQVPDL----TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTT 483

Query: 361 IDKTLPEPLSSLKSHLAV 378
             +  P  +  L + +A+
Sbjct: 484 TPRLSPVQMLGLTNVVAL 501



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 117/263 (44%), Gaps = 27/263 (10%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V   +D+V  SAG         HTL L +N +V++ GS+  G LG G  T +    + + 
Sbjct: 442 VPDLTDVVALSAGGN-------HTLALRTNGTVWAWGSNSDGQLGDGTTTPR---LSPVQ 491

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKG 215
                +VV +SA   H+  V   G V+  G NS    G   T     P+  P L + +  
Sbjct: 492 MLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDVVA- 550

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
                ++AG + +  L   G V   GSN+  QLG G T  R +P  +  L +V   V ++
Sbjct: 551 -----LSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGLTDV---VALS 602

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG ++ LA+  +G V+++GS     LG G     L P  +            + AG  H 
Sbjct: 603 AGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNL----TGTSNLYAGAGHS 658

Query: 336 VALDSSGYVYTWGKGYCGALGHG 358
           +AL + G    WG  Y G LG G
Sbjct: 659 LALRTDGTGRAWGNNYGGQLGDG 681



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 10/211 (4%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++A  +H+  +   G V+  G NSS   G   T  P   P  V  L  V    ++AG + 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGD-GTTTPRGSPVQVPGLTDVVA--LSAGNHH 57

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              L   G V   GSN+ GQLG G T  R +   +  L +V   V ++AG SY LA+  +
Sbjct: 58  CLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTDV---VALSAGSSYTLALRTD 114

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G      LG G     L P  +         VV +S+G  H +AL + G V+ W
Sbjct: 115 GTVWAWGYNFYGQLGDGTTTPRLAPVQVPGL----TDVVALSSGIYHSLALRTDGTVWAW 170

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G    G LG G    +  P  +  L   +A+
Sbjct: 171 GDNASGQLGDGTATRRLSPVQVPGLTDVVAL 201


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 119/271 (43%), Gaps = 20/271 (7%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPSAAHVVQV 168
           G   +  G +HT  I+ S  ++S G     V  LGHG E++  +           +V  V
Sbjct: 340 GFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDV 399

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H A V  SGQ+FT GD +    GH D  R    PR VE+L G+   +V  G+  T
Sbjct: 400 ACGPWHTAVVASSGQLFTFGDGTFGALGHGD-RRSTSVPREVESLIGLIVTKVACGVWHT 458

Query: 229 GFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             +             + RG V T G    GQLGHGD   +  P+ +  L    ++ Q+A
Sbjct: 459 AAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTN-ENICQVA 517

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G S  ++ T  G VY+ GS +   LG+         R         +    ++ G  HV
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVE--EIACGSYHV 575

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             L S   +YTWGKG  G LGHG+  +K  P
Sbjct: 576 AVLTSKSEIYTWGKGLNGQLGHGNVENKREP 606



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS----------FTRI--NFPSA 162
           +  G +HT ++++S  +F+ G    G LGHG   +  V            T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHT 458

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLL-PECVISLTNENICQVA 517

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 277
            G + T   T RGHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKGNFPERVEGDIVEASVEEIACG 571

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    +Y++G G N  LGHG   ++ +P  +   R K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAI 620



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G    G+LGHG   D   PK I+ + 
Sbjct: 278 PKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVR 337

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            +G    +A G  +  A+T +G +YS+G G++    LGHG +     P+ + T   +G++
Sbjct: 338 GLG-FKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRV-TGDLQGLY 395

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           V  V+ G  H   + SSG ++T+G G  GALGHGD    ++P  + SL
Sbjct: 396 VSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESL 443


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 137/281 (48%), Gaps = 30/281 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL IS +  ++SCG    G LGHG    + +    ++      VV V+A   H
Sbjct: 280 VSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGL-LMLVDTIRHERVVSVAAGRAH 338

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRD--------TNRP--IFRPRLVEALKGV---PCKQV 221
           +  +   G++FT GD S    GH            +P  I  P+ +++L+     P  +V
Sbjct: 339 SVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARV 398

Query: 222 TA---GLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDR--PTPKSIAPLEEVGSVV-- 272
           TA   G + +  +T+ G +   GSN HGQ  LG GDTLDR  PT   +A   E G +V  
Sbjct: 399 TAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVRA 458

Query: 273 -QIAAGPSYMLA---VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            Q+  G  + LA   V G+  V S G  S   LG G++ +  +   I     KG  +V V
Sbjct: 459 MQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPAL--KGKSIVCV 516

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           S GD H  A+   G +Y WG+G CG LG GD+ ++  P+ L
Sbjct: 517 SVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAPKQL 557



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 19/225 (8%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPC 218
           P   H+  VSA  +H+A + + G+++T G  SS   GH   T   +  PR++ +L+    
Sbjct: 218 PDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQRTRI 277

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             V+ G N T  ++  G + +CG   HGQLGHG   D      +  +     VV +AAG 
Sbjct: 278 VSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHE-RVVSVAAGR 336

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-----------PRAIQTFR----RKGI 323
           ++ +A+  +G ++++G  S   LGH +    +Q           P+AIQ+      +   
Sbjct: 337 AHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPA 396

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLP 366
            V  ++AG +H +A+  +G +  +G    G   LG GD +D+ +P
Sbjct: 397 RVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIP 441



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 32/232 (13%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHG------------------PETTQCVSFTR 156
           +  GR H++ L ++  +F+ G +  G LGH                   P+  Q +   R
Sbjct: 332 VAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPAR 391

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDT-NR--PIFRPRLVE 211
           +  P  A V  ++A  +H+  V  +G +   G N       G  DT +R  P   P  +E
Sbjct: 392 LKPP--ARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALE 449

Query: 212 ALKG--VPCKQVTAGLNFT-GFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           +  G  V   QV  G   T   + ++GH  V + G N++G+LG GD L+R     I P  
Sbjct: 450 SEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPI-PAL 508

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           +  S+V ++ G  +  A+  +G +Y +G G    LG G+  +   P+ +  F
Sbjct: 509 KGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAPKQLGGF 560



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-----------GIHVVRVSAGDEHVVA 337
            +Y+ G G +  LG  +  ++ QP+ +    R             IH+  VSAG  H  +
Sbjct: 176 AMYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPLYQGAPDDIHLAVVSAGSSHSAS 235

Query: 338 LDSSGYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLK 373
           +   G +YTWG    G LGHG    I+ + P  ++SL+
Sbjct: 236 ISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQ 273


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 123/273 (45%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ S     +  G+   G+LG+G + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
            H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  +
Sbjct: 194 WHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAAV 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   +  P  +A L +     +IA G S 
Sbjct: 252 VEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDY-DFCRIACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V S G+     LG+     +L P  I+     G HVV+V+ G  HV  L +
Sbjct: 311 TVGLTTSGQVLSMGNTVYGQLGNPRSDGKL-PCLIEDI--MGEHVVQVACGSYHVAVLTN 367

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD  D+ +P  + SL+
Sbjct: 368 KSEVFTWGKGANGRLGHGDVEDRKIPTLVESLR 400



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 105/221 (47%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LG+G  +    PK I+ + E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G    LGHGD+  K  P  ++SL
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASL 296



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 7/193 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESL- 126

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + +V  +A G  +  AVT +G +Y++G G++    LG+G       P+ I     +G  
Sbjct: 127 AICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGV-LEGHQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGL 381
           V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+     G+
Sbjct: 186 VAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGV 245

Query: 382 SVLAEVCPTIVQE 394
              A V   IV +
Sbjct: 246 WHTAAVVEVIVTQ 258



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 10/129 (7%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++     + +  V+ G+ H  A+ +SG +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 364 TLPEPLSSL 372
            +P+ +S +
Sbjct: 172 WIPKRISGV 180


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 16/220 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH  T   +F+PRLVE+L     + +  G
Sbjct: 80  VSYVACGVKHAALVTRQSEVFTWGEECSGRLGH-GTGTNVFQPRLVESLSICNVELIACG 138

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  + 
Sbjct: 139 EFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSTVSCGTWHT 197

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVEV 255

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                  SSG ++TWG G    LGHGD   K  P  + SL
Sbjct: 256 IISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSL 295



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 21/289 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 135 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLDGLPVSTVSCG 193

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  SGQ++T GD +    GH +     + P+ VE+LKG+    V+ G+  T  +
Sbjct: 194 TWHTALITSSGQLYTFGDGTFGVLGHGNRASCSY-PKEVESLKGLRTISVSCGVWHTAAV 252

Query: 232 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                       G + T G     +LGHGD   +  P  I  L +  +  + A G +  +
Sbjct: 253 VEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDY-NFHKAACGHTLTI 311

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L ++G
Sbjct: 312 GLTTSGHIFTVGSSVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHVAVLTNAG 369

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC 388
            VYTWGKG  G LGHGD  D+ +P  + +L+     +   G S  A +C
Sbjct: 370 EVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAIC 418



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 7/187 (3%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 54  DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRL 110

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   +   P+ +  L  + +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 111 GHGTGTNVFQPRLVESL-SICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 169

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 170 VSHWIPKRV-SGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 228

Query: 367 EPLSSLK 373
           + + SLK
Sbjct: 229 KEVESLK 235



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 9/136 (6%)

Query: 251 GDTLDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G T D   PK   PLE   +  V  +A G  +   VT    V+++G   +  LGHG   +
Sbjct: 61  GTTTDVLVPK---PLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTN 117

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLP 366
             QPR +++     + ++  + G+ H  A+ ++G +YTWG G    G LGHG  +   +P
Sbjct: 118 VFQPRLVESLSICNVELI--ACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP 175

Query: 367 EPLSSLKSHLAVQGLS 382
           + +S     L V  +S
Sbjct: 176 KRVSGPLDGLPVSTVS 191


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 17/242 (7%)

Query: 144 HGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
           HGP  TT  +    +       V  V+    HAA + +  +VFT G+  S   GH     
Sbjct: 242 HGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGH-GAGT 300

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPK 260
            IF+PRL+E+L     + +  G   T  +T  G ++T G  TH  G LGHG T+    PK
Sbjct: 301 SIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPK 360

Query: 261 SIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            ++ PLE +  V  ++ G  +   +T +G +Y+FG G+   LGHG +     P+ +++  
Sbjct: 361 RVSGPLEGL-QVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESL- 418

Query: 320 RKGIHVVRVSAGDEHVVAL---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            KG+  + VS G  H  A+          SSG ++TWG G    LGHGD   K  P  + 
Sbjct: 419 -KGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVP 477

Query: 371 SL 372
           SL
Sbjct: 478 SL 479



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 22/273 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 319 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIP-KRVSGPLEGLQVSTVSCG 377

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H A +  SGQ++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  + 
Sbjct: 378 TWHTALITSSGQLYTFGDGTFGALGHGNRET---ISYPKEVESLKGLRTISVSCGVWHSA 434

Query: 230 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +            G + T G     +LGHGD   +  P  +  L +  +  + A G + 
Sbjct: 435 AVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDY-NFHKSACGHTL 493

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L +
Sbjct: 494 TIGLTTSGHMFTVGSSVYGQLGN-PNNDGRYPRLVED-KVGGGGVVEVACGSYHVAVLTN 551

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +G VYTWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 552 TGEVYTWGKGANGRLGHGDIADRKVPTLVEALR 584



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 20/255 (7%)

Query: 114 MQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQV 168
           +Q++T   G +HT LI++S  +++ G    G LGHG   T  +S+ + +        + V
Sbjct: 369 LQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGLRTISV 426

Query: 169 SASENHAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           S    H+A V++         SG++FT GD   +  GH D +  + +P  V +L      
Sbjct: 427 SCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKL-KPTCVPSLIDYNFH 485

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +   G   T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++A G  
Sbjct: 486 KSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGR-YPRLVEDKVGGGGVVEVACGSY 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           ++  +T  G VY++G G+N  LGHG+  D   P  ++  R + +   R++ G     A+ 
Sbjct: 545 HVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVK--RIACGSSFTAAIS 602

Query: 340 SSGYVYTWGKGYCGA 354
              +V    +  C A
Sbjct: 603 QHKWVSGVEQSQCSA 617



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 14/146 (9%)

Query: 249 GHGDTLDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           G G T D   PK   PLE   +  V  +A G  +   +T    V+++G   +  LGHG  
Sbjct: 243 GPGATTDILVPK---PLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAG 299

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKT 364
               QPR +++     + ++  + G+ H  A+ ++G +YTWG G    G LGHG  +   
Sbjct: 300 TSIFQPRLLESLSICNVEII--ACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHW 357

Query: 365 LPEPLSSLKSHLAVQGLSVLAEVCPT 390
           +P+ +S       ++GL V    C T
Sbjct: 358 IPKRVSG-----PLEGLQVSTVSCGT 378


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 135/290 (46%), Gaps = 20/290 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  H+L L S+ SV++ GS+  G LG G  T + V    +     + V
Sbjct: 442 VQGLSGVVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVPVQVL-----SGV 496

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A  NH+  V   G V+T G N     G   T+  +  P  V+ L GV    V AG 
Sbjct: 497 VAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLV-PVQVQGLSGVAA--VAAGS 553

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G V   GSN+ G+LG G T +R  P  +  L      V +AAG  + L V 
Sbjct: 554 FHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLS---GGVAVAAGGFHSLVVR 610

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++GS S   LG G       P  +Q        VV V AG+ H +A+ S G V+
Sbjct: 611 SDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLS----GVVAVDAGNSHSLAVRSDGTVW 666

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQED 395
           TWG    G LG G    +++P  +  L   +A+        + P +V+ D
Sbjct: 667 TWGYNSYGQLGDGTTTRRSVPVQVPGLSGVVAM----ATGALHPLVVRSD 712



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 127/271 (46%), Gaps = 25/271 (9%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YH+L L S+ SV++ G +  G LG    T++ V    +     +  + V+A  +H+  
Sbjct: 304 GSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVP---VQVRGLSGGMAVTAGSSHSLA 360

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V   G V+  G N S   G   TN     P  V+ L G     V AG N +      G V
Sbjct: 361 VGSDGTVWAWGSNFSGERGEGTTNNRA-SPVQVQGLGG--GVAVAAGFNHSLAARSDGSV 417

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              GSN  GQLG G T +  +P  +  L     VV +AAG  + LA+  +G V+++GS +
Sbjct: 418 WAWGSNDSGQLGDGTTRNSTSPVQVQGLS---GVVAVAAGFDHSLALRSDGSVWAWGSNA 474

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG G   + L P  +Q        VV V+AG  H +A+ S G V+TWG    G LG 
Sbjct: 475 YGQLGEGTTTNRLVP--VQVLS----GVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGD 528

Query: 358 GDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G   ++ +P         + VQGLS +A V 
Sbjct: 529 GTTSNRLVP---------VQVQGLSGVAAVA 550



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 125/262 (47%), Gaps = 22/262 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L  + +V++ GS+  G LG G  T        +  P  + VV V+A  +H+  V  
Sbjct: 57  YSLALRPDGTVWATGSNDLGQLGDGTTTNHSAP---VQVPGLSGVVAVAAGSSHSLAVRH 113

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  G NS    G   T   +  P  V+ L GV    V AG +++  +   G V   
Sbjct: 114 DGTVWAWGSNSDGQLGDGTTTMRL-TPVRVQGLSGV--VSVAAGSSYSLAVRSDGTVWAW 170

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSN  GQLG G T +R  P  +  L     VV +AAG S+ LAV  +G V+++G+ S+  
Sbjct: 171 GSNFSGQLGDGTTSNRLVPVQVPGLS---GVVSVAAGSSHSLAVLSDGSVWAWGANSSGQ 227

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G + + L P  +          V V+AG  H +A+ S G V+TWG    G LG G +
Sbjct: 228 LGDGTKINRLVPVQVPGLSGV----VAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTK 283

Query: 361 IDKTLPEPLSSLKSHLAVQGLS 382
            D+ +P         + VQGLS
Sbjct: 284 SDRLVP---------VRVQGLS 296



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 123/263 (46%), Gaps = 22/263 (8%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  H+L + S+ +V++ GS+L G LG G  + + V    +     + V
Sbjct: 490 VQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVP---VQVQGLSGV 546

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             V+A   H+  V   G V+  G NSS   G   T+  +  P  V  L G     V AG 
Sbjct: 547 AAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLV-PGRVPGLSG--GVAVAAG- 602

Query: 226 NFTGF--LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              GF  L +R  G V T GSN+ G+LG G T  R  P  +  L     VV + AG S+ 
Sbjct: 603 ---GFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLS---GVVAVDAGNSHS 656

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAV  +G V+++G  S   LG G       P  +Q     G  VV ++ G  H + + S 
Sbjct: 657 LAVRSDGTVWTWGYNSYGQLGDGTTTRRSVP--VQVPGLSG--VVAMATGALHPLVVRSD 712

Query: 342 GYVYTWGKGYCGALGHGDEIDKT 364
           G V+ WG    G LG+G  +  T
Sbjct: 713 GTVWAWGYNSFGQLGNGSPLFAT 735



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 118/260 (45%), Gaps = 28/260 (10%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRINFP--SAAHVVQV 168
           MQ   GR+ + L+             GVL   G G  T +    T    P   A    ++
Sbjct: 1   MQGNAGRWMSRLLG---------VWIGVLMGVGCGLPTDESAEQTSRGAPLRDAPSRARL 51

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A  +++  +   G V+  G N     G   T      P  V  L GV    V AG + +
Sbjct: 52  AAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNH-SAPVQVPGLSGVVA--VAAGSSHS 108

Query: 229 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             L +R  G V   GSN+ GQLG G T  R TP  +  L     VV +AAG SY LAV  
Sbjct: 109 --LAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLS---GVVSVAAGSSYSLAVRS 163

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++GS  +  LG G   + L P  +Q     G  VV V+AG  H +A+ S G V+ 
Sbjct: 164 DGTVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSG--VVSVAAGSSHSLAVLSDGSVWA 219

Query: 347 WGKGYCGALGHGDEIDKTLP 366
           WG    G LG G +I++ +P
Sbjct: 220 WGANSSGQLGDGTKINRLVP 239



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 13/126 (10%)

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           APL +  S  ++AAG SY LA+  +G V++ GS     LG G   +   P  +Q     G
Sbjct: 40  APLRDAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAP--VQVPGLSG 97

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
             VV V+AG  H +A+   G V+ WG    G LG G    +  P         + VQGLS
Sbjct: 98  --VVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTP---------VRVQGLS 146

Query: 383 VLAEVC 388
            +  V 
Sbjct: 147 GVVSVA 152


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 147/324 (45%), Gaps = 18/324 (5%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 541

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVV 166
           +A     + G ++  L +   V+S G    G LGHG   P     V        +  HVV
Sbjct: 542 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 597

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G  
Sbjct: 598 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSG 656

Query: 227 FTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+
Sbjct: 657 DAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIAL 715

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 716 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 773

Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
           ++WG        H D +  T PEP
Sbjct: 774 HSWGSN--DQCQHFDTLRVTKPEP 795



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 16/220 (7%)

Query: 164 HVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G    
Sbjct: 537 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGKQAG 593

Query: 220 Q----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+ +A
Sbjct: 594 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVA 652

Query: 276 --AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
             +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  G +
Sbjct: 653 CGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRCGSQ 710

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 711 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 750



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 713

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 714 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 773 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 818



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 545

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 546 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 592


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +Y +G G  G LG G   +   P P+ 
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 4/161 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           V +S G+EH   L  SG V+T+G G  G LGH    D+  P
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP 167



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQ 316
            P+ I  L +  +++Q++ G  + LA+  +G  +++G  S+  LG G++   +  P+ ++
Sbjct: 9   VPRLIQKLNQ-QTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 67

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +   +GI + +V+AG  H  AL  SG V+ WG    G LG  DE D+  P
Sbjct: 68  SL--EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 115


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 23/260 (8%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 130 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 186

Query: 180 QSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             G V+  G+N     G     HR T      P  V  L+GV    V  G   +  L   
Sbjct: 187 ADGTVWAWGNNGYGQLGNGSTAHRAT------PVQVPGLQGV--VAVAGGYMHSLALCAD 238

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G
Sbjct: 239 GTVWAWGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWG 295

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           +     LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G 
Sbjct: 296 NNGFGQLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQ 351

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LG+G       P P+  L +
Sbjct: 352 LGNGSFSSSARPAPVQGLGA 371



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 127/277 (45%), Gaps = 24/277 (8%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S  H +  V+     G + +  G  H+L L ++ +V++ G +  G LG+G   T   S T
Sbjct: 206 STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPT 262

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALK 214
            +  P  + VV V+A   H+  +   G V+  G+N     G    T R   +P  VE L+
Sbjct: 263 PVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLR 320

Query: 215 GVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            V    V     F   L +R  G + + G+N  GQLG+G       P   AP++ +G+V 
Sbjct: 321 EV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVT 373

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
            +AAG  + +AV  +G V+++G      LGH     E  P      R  G+   V V+AG
Sbjct: 374 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAG 428

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             H +++ + G ++ WG    G LG  +     +P P
Sbjct: 429 FYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVPAP 465



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 20/204 (9%)

Query: 182 GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 139 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 190

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 191 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 247

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 248 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 303

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQG 380
                 +T P  +  L+  +AV G
Sbjct: 304 EAVSTQRTKPGRVEGLREVVAVAG 327



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 7/160 (4%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 123 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 179

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LA+  +G V+++G+     LG+G       P  +   +     VV V+ G  H +AL
Sbjct: 180 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQ----GVVAVAGGYMHSLAL 235

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            + G V+ WG    G LG+G  +    P P+  L   ++V
Sbjct: 236 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSV 275



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           R TP   A  ++ G V  +A G  Y LA+  +G V++ GS S   LG+G       PR +
Sbjct: 110 RATPAQAA--DQRG-VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPV 166

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
               R     V V+AG  H +AL + G V+ WG    G LG+G    +  P  +  L+  
Sbjct: 167 PGLSR----AVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV 222

Query: 376 LAVQG 380
           +AV G
Sbjct: 223 VAVAG 227


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 121/229 (52%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G+V++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +
Sbjct: 199 EAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALL 257

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLAYVSDLGK 315

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G  +D+ +P P+         L+SH + + L ++A
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIA 364



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG V++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 200 AHSMALSMSGNVYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSAL 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 257 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDLG 314

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 374

Query: 349 K 349
           K
Sbjct: 375 K 375


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 21/315 (6%)

Query: 103 SSDIVETSAGNMQ--ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-IN 158
           S  IVE+  G +   +  G Y T  +++S  +F  G +  G      E T      R I+
Sbjct: 347 SPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQIS 406

Query: 159 FPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
            P A   +  V+  + H A V  SGQ+FT GD +    GH +  + +  P+ VE+LKG+ 
Sbjct: 407 GPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNL-QSVSHPKEVESLKGLW 465

Query: 218 CKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            K V  G   T            F  + G + T G    G+LGH D   +  P  +A L 
Sbjct: 466 VKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLV 525

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           E    VQ++ G    +A+T  G +Y+ GS  +  LG+ +  +  +  AI   + K   V 
Sbjct: 526 E-HDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKN--KSIAIVEGKLKEEFVK 582

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
            +S+G  HV AL S G VYTWGKG  G LG G+  D+ +P  + +L+    VQ ++  + 
Sbjct: 583 EISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDR-QVQSIACGSN 641

Query: 387 VCPTIVQEDTRSCSD 401
           +   I    + S SD
Sbjct: 642 LTAAICLHKSISVSD 656



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 18/229 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S   NHAA + + G+VF  G+ S    GH+  +  +  P +VE+L G   K V  G
Sbjct: 307 VRNISLGRNHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPTIVESLDGFLVKFVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G +   G N +G   +    T  +  P+ I+ PL  V S+  +A G  + 
Sbjct: 366 EYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGV-SISNVACGDWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
            AV+ +G ++++G G+   LGHG       P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESL--KGLWVKSVACGSWHTAAIVDV 482

Query: 341 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                      G ++TWG G  G LGH D   K  P  ++ L  H  VQ
Sbjct: 483 IFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQ 531



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 14/186 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E    +  + ++ G N    +T RG V   G  + G+LGH   +D  +P  +  L+
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 267 EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKG 322
             G +V+ +A G     A+T +G ++ +G    G N  +       +  PR I +    G
Sbjct: 356 --GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNL-VCEERTGSQWLPRQI-SGPLAG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           + +  V+ GD H  A+ SSG ++T+G G  G LGHG+    + P+ + SLK      GL 
Sbjct: 412 VSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLK------GLW 465

Query: 383 VLAEVC 388
           V +  C
Sbjct: 466 VKSVAC 471


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G V+ +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 277 TPVVVEKDRI 286



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 4/233 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +  L  +   VF+ G +    LG+G      V +      S   V++V+    H+  
Sbjct: 83  SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 142

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+PI R R+   L+      +  G   +  +   G 
Sbjct: 143 LTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQNKVVVNIACGQMCSMAVVNTGE 201

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N +GQLG G + ++PTP  +A L+ +  V ++A G ++ L +T  G VY++G+ 
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 260

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           S   LG G + ++  P  +   + + I +    +      A    G+VY WG+
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTS-AAKTQGGHVYMWGQ 312



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 3/142 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 36  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATT-EG 94

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 95  EVFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 153

Query: 349 KGYCGALGHGDEIDKTLPEPLS 370
               G +G G   ++ +P  ++
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVT 175



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           S A L+ V       +  + +L  T N  ++  G+    CLG G+    ++PR + +   
Sbjct: 14  SEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTG 73

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           K I  +   +G  H+V   + G V+TWG      LG+G      +P  +S+
Sbjct: 74  KKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHIST 123


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 4/253 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+
Sbjct: 78  VTENDEVFVLGMNCSGCLGTG-DVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGE 136

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 137 VYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN 196

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG 
Sbjct: 197 NSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 256

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   +  QP   +    +GI V RV+ G  H + L   G +Y WG    G LG G++ ++
Sbjct: 257 GSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ 314

Query: 364 TLPEPLSSLKSHL 376
           + P  ++  K  +
Sbjct: 315 SYPTTVTVDKDRV 327



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +V ++ +VF  G N S C G  D    I  P+ +++L  K + C    +G +    
Sbjct: 73  NEVLYVTENDEVFVLGMNCSGCLGTGDVQSTI-EPKRLDSLCGKKIACLSYGSGPHVV-L 130

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V+T G N + QLG+G T     P  ++       V+++A G  + + +T +G V
Sbjct: 131 ATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 190

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G VY WG  
Sbjct: 191 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKV-VVNIACGQMCSMAVVENGEVYVWGYN 249

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 250 GNGQLGLGSSGNQPTPCRIAALQ 272



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 7/196 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E LK +   C   +AG N   ++T    V   G N  G LG GD      PK
Sbjct: 49  PIFSLCSQEELKLIRQACVFGSAG-NEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPK 107

Query: 261 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G VY++G  +   LG+G  +  L P  + T  
Sbjct: 108 RLDSLCGKKIACLSYGSGPHVVLA-TEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVST-N 165

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S   +  V 
Sbjct: 166 LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVV 225

Query: 380 GLSVLAEVCPTIVQED 395
            ++   ++C   V E+
Sbjct: 226 NIAC-GQMCSMAVVEN 240



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 172 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQ 231

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 232 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGCAHTLVL 289

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   V++IAA  S     A T +G 
Sbjct: 290 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKD--RVIEIAACHSAHTSAAKTQSGQ 347

Query: 290 VYSFG 294
           VY +G
Sbjct: 348 VYMWG 352


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 4/253 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+
Sbjct: 77  VTENDEVFVLGMNCSGCLGTG-DIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGE 135

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 136 VYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN 195

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG 
Sbjct: 196 NSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 255

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   ++  P  I     +GI V RV+ G  H + L   G +Y WG    G LG G++ ++
Sbjct: 256 GSSGNQPTPCRIAAL--QGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ 313

Query: 364 TLPEPLSSLKSHL 376
           + P  ++  K  +
Sbjct: 314 SYPTTVTVDKDRV 326



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +V ++ +VF  G N S C G  D    I  P+ +++L  K + C    +G +    
Sbjct: 72  NEVLYVTENDEVFVLGMNCSGCLGTGDIQSTI-EPKRLDSLCGKKIACLSYGSGPHVV-L 129

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V+T G N + QLG+G T     P  ++       V+++A G  + + +T +G V
Sbjct: 130 ATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 189

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G VY WG  
Sbjct: 190 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKV-VVNIACGQMCSMAVVENGEVYVWGYN 248

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 249 GNGQLGLGSSGNQPTPCRIAALQ 271



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 7/196 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E LK +   C   +AG N   ++T    V   G N  G LG GD      PK
Sbjct: 48  PIFSLCSQEELKLIRQACVFGSAG-NEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPK 106

Query: 261 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G VY++G  +   LG+G  +  L P  + T  
Sbjct: 107 RLDSLCGKKIACLSYGSGPHVVLA-TEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVST-N 164

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S   +  V 
Sbjct: 165 LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVV 224

Query: 380 GLSVLAEVCPTIVQED 395
            ++   ++C   V E+
Sbjct: 225 NIAC-GQMCSMAVVEN 239



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 171 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQ 230

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 231 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGCAHTLVL 288

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   VV+IAA  S     A T +G 
Sbjct: 289 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKD--RVVEIAACHSAHTSAAKTQSGQ 346

Query: 290 VYSFG 294
           VY +G
Sbjct: 347 VYMWG 351


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 12/264 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S+ +V++ G++  G LG G  T   V    +     + VV V A  +H
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVP-VQVQGLSEVVAVDAGSSH 59

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G N+S   G   T   I R   V+ L       V AG +    L   
Sbjct: 60  SLAVRSDGTVWAWGSNASGQLGDETT---ISRSTPVQVLGLSGVLFVAAGSSHVLALRYD 116

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   GSN+ GQ G G T +R  P     L     V+ +AAG ++ LAV  +G  +++G
Sbjct: 117 GTVWAWGSNSSGQRGDGTTNNRALPVQAQGLS---GVMAVAAGDNHSLAVRSDGSAWAWG 173

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           S ++  LG G   +  +P  +Q        VV V+AG  H +A+ S G V+ WG    G 
Sbjct: 174 SNASGQLGEGTTSNRPEPVQVQGLS----GVVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAV 378
           LG G   D+ +P  +  L   +AV
Sbjct: 230 LGDGTTTDRLVPVQVQGLSGVVAV 253



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 125/274 (45%), Gaps = 27/274 (9%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAH 164
           +G M +  G  H+L + S+ S ++ GS+  G LG G     PE  Q    +         
Sbjct: 148 SGVMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS--------G 199

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV V+A   H+  V   G V+  G N+S   G   T   +  P  V+ L GV    V AG
Sbjct: 200 VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV-PVQVQGLSGVVA--VAAG 256

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  +   G V   G N   QLG G ++    P  +  L    +VV +AAG ++ LAV
Sbjct: 257 HHHSLAVRNDGTVWGWGRNDSNQLGKG-SMRLLVPAQVQGLS---AVVAVAAGDTHSLAV 312

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V++ GS +N  LG G     L P  + +       VV V+A D H +A+ S G V
Sbjct: 313 GSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVLS------GVVSVAANDYHSLAVRSDGTV 366

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + WG    G LG G    + +P  +S L   ++V
Sbjct: 367 WAWGYNSTGQLGDGTTTTRLVPVQVSGLSEVVSV 400



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 121/264 (45%), Gaps = 19/264 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  H+L + S+ +V++ G++  G LG G  T + V    +     + V
Sbjct: 194 VQGLSGVVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVP---VQVQGLSGV 250

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A  +H+  V   G V+  G N S   G + + R +  P  V+ L  V    V AG 
Sbjct: 251 VAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG-KGSMR-LLVPAQVQGLSAVVA--VAAGD 306

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G V   GSN +GQLG G T  R     + P+  +  VV +AA   + LAV 
Sbjct: 307 THSLAVGSDGTVWAVGSNNNGQLGDGTTTYR-----LVPVPVLSGVVSVAANDYHSLAVR 361

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++G  S   LG G     L P  +         VV V AG  H +A+ S G  +
Sbjct: 362 SDGTVWAWGYNSTGQLGDGTTTTRLVPVQVSGLS----EVVSVVAGGYHSLAVRSDGSAW 417

Query: 346 TWGKGYCGALGHGDEIDKTLPEPL 369
            WG    G LG G      LP P+
Sbjct: 418 DWGSNAYGQLGDGST--TYLPVPV 439



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 118/265 (44%), Gaps = 33/265 (12%)

Query: 107 VETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG------PETTQCVSFTRINF 159
           V+  +G + +  G +H+L + N  +V+  G +    LG G      P   Q +S      
Sbjct: 244 VQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLLVPAQVQGLSA----- 298

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
                VV V+A + H+  V   G V+  G N++   G   T    +R   V  L GV   
Sbjct: 299 -----VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTT---TYRLVPVPVLSGV--- 347

Query: 220 QVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            V+   N    L +R  G V   G N+ GQLG G T  R  P  ++ L EV SVV   AG
Sbjct: 348 -VSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQVSGLSEVVSVV---AG 403

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + LAV  +G  + +GS +   LG G       P  +Q     G     V++G  H +A
Sbjct: 404 GYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSGVGA----VASGSSHSLA 459

Query: 338 LDSSGYVYTWGKGYCGALGHGDEID 362
           L S G V+TWG    G LG+G  ++
Sbjct: 460 LRSDGTVWTWGYNSFGQLGNGPPLN 484



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +    YH+L + S+ +V++ G +  G LG G  TT+ V    +     + VV V 
Sbjct: 345 SGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVP---VQVSGLSEVVSVV 401

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFT 228
           A   H+  V   G  +  G N+    G   T   P+  P  V+ L GV    V +G + +
Sbjct: 402 AGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPV--PVRVQQLSGVGA--VASGSSHS 457

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
             L   G V T G N+ GQLG+G  L+  T
Sbjct: 458 LALRSDGTVWTWGYNSFGQLGNGPPLNTAT 487


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
           FT++ +P    ++ V+A   H A + QSG++FT G+      GH D    I  P+ V AL
Sbjct: 122 FTKL-YPEE-RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD-EESISTPKQVVAL 178

Query: 214 KGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVG 269
             +P K V  G   T  L  T    ++T G+N  GQLG GD  D  T  P+S+A +    
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVA-VPGAK 237

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            +V + AG S    +  +G ++++G G +  LGHG+  +  QP  + +    G  VV V+
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLY--GHVVVAVA 295

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            G  H +AL  +G +++WG+G  G LGHG
Sbjct: 296 LGGGHSLALTKAGELFSWGRGENGQLGHG 324



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 129 SSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S +++ G++  G LG G   +   C+    +  P A  +V + A  + AA +  SG +FT
Sbjct: 202 SGLYTWGNNEFGQLGRGDCGDDFTCLP-ESVAVPGAKRLVALDAGASRAAVIDSSGALFT 260

Query: 187 CGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G       GH DT NR  ++P LV +L G     V  G   +  LT  G + + G   +
Sbjct: 261 WGRGDHGRLGHGDTENR--YQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGEN 318

Query: 246 GQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           GQLGHG    +   PK +    ++  ++ I+AG  + +A   +G VY++G      LG G
Sbjct: 319 GQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTG 378

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           +  D       +    +GI    +S G +H VAL S   +Y+WG G  G LG  +E ++ 
Sbjct: 379 DSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQC 438

Query: 365 LP 366
            P
Sbjct: 439 AP 440



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 115/262 (43%), Gaps = 16/262 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAAHVVQVS 169
           +  G  H  +IS S  +F+ G    G LGHG E +     Q V+   I         + +
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            + +H A       ++T G+N     G  D        P  V          + AG +  
Sbjct: 194 IALSHTA----GSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRA 249

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN 287
             +   G + T G   HG+LGHGDT +R  P  ++ L   G VV  +A G  + LA+T  
Sbjct: 250 AVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSL--YGHVVVAVALGGGHSLALTKA 307

Query: 288 GVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           G ++S+G G N  LGHG  Q  +L P+ +Q F      ++ +SAG  H VA    G VY 
Sbjct: 308 GELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMP-KIIGISAGGYHSVAQLDDGSVYA 366

Query: 347 WGKGYCGALGHGDEIDKTLPEP 368
           WG    G LG GD  D  +  P
Sbjct: 367 WGMSDYGILGTGDSDDGAINIP 388



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 5/161 (3%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG      ++  G + T G   +G+LGHGD     TPK +  L  +        G S 
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 281 M-LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + L+ T    +Y++G+     LG G+  D+    P ++     K   +V + AG      
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAK--RLVALDAGASRAAV 251

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +DSSG ++TWG+G  G LGHGD  ++  P  +SSL  H+ V
Sbjct: 252 IDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVV 292



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 31/48 (64%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           ++ V+AG  H+  +  SG ++TWG+G  G LGHGDE   + P+ + +L
Sbjct: 131 IILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVAL 178



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 11/194 (5%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S+ ++F+ G    G LGHG +T      T ++      VV V+    H+  + ++G++F+
Sbjct: 254 SSGALFTWGRGDHGRLGHG-DTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFS 312

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGS 242
            G   +   GH         P+ ++    +P      G++  G+ ++     G V+  G 
Sbjct: 313 WGRGENGQLGHGSYQSQQLAPKQLQFFVDMPK---IIGISAGGYHSVAQLDDGSVYAWGM 369

Query: 243 NTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           + +G LG GD+ D     P+ I     +     I+ G  + +A+T +  +YS+G G    
Sbjct: 370 SDYGILGTGDSDDGAINIPQRILMPRGI-RFKTISCGFQHTVALTSDNTIYSWGCGLGGR 428

Query: 301 LGHGEQHDELQPRA 314
           LG   + ++  P A
Sbjct: 429 LGTFNEKNQCAPIA 442


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 18/207 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PR+VE+L       V  G   T  +TI
Sbjct: 292 HAALVTRQGEVFTWGEESGGRLGH-GVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTI 350

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK ++ PLE +  V  +  GP +   VT  G +
Sbjct: 351 TGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGL-QVTSVTCGPWHTALVTSMGQL 409

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 410 FTFGDGTFGALGHGDRENISYPKEVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSSSI 467

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG ++TWG G    LGHGD+  +  P
Sbjct: 468 SSGKLFTWGDGDKNRLGHGDKEPRLKP 494



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 124/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   R++ P     V  V+  
Sbjct: 338 VACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIP-KRVSGPLEGLQVTSVTCG 396

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V   GQ+FT GD +    GH D    I  P+ VE+L G+    V  G+  T  +
Sbjct: 397 PWHTALVTSMGQLFTFGDGTFGALGHGDREN-ISYPKEVESLSGLRTIAVACGVWHTAAV 455

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +     ++A G S 
Sbjct: 456 VEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-DFHKVACGHSI 514

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V+S GS     LG+     ++ P  ++  +  G  V  VS G  HVV L S
Sbjct: 515 TVGLTTSGQVFSMGSTVYGQLGNPSADGKI-PCLVED-KLFGESVEEVSCGAYHVVVLTS 572

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 573 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALK 605



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+ S   +F+ G    G LGHG    + +S+ + +   S    + V+    
Sbjct: 393 VTCGPWHTALVTSMGQLFTFGDGTFGALGHGDR--ENISYPKEVESLSGLRTIAVACGVW 450

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      +V 
Sbjct: 451 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYDFHKVA 509

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + GS  +GQLG+  + D   P  +       SV +++ G  +++
Sbjct: 510 CGHSITVGLTTSGQVFSMGSTVYGQLGN-PSADGKIPCLVEDKLFGESVEEVSCGAYHVV 568

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 569 VLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYTAAICLHK 626

Query: 343 YVYTWGKGYCGA 354
           +V +  +  C A
Sbjct: 627 WVSSAEQSQCSA 638



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           NSS+     D    +  PR +E+   +    +  G+     +T +G V T G  + G+LG
Sbjct: 259 NSSYVTLRTD----VLLPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLG 314

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   D   P+ +  L    S+  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 315 HGVVKDVIQPRMVESL-AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDV 373

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P+ + +   +G+ V  V+ G  H   + S G ++T+G G  GALGHGD  + + P+
Sbjct: 374 SHWIPKRV-SGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPK 432

Query: 368 PLSSLKSHLAVQGLSVLAEVC 388
            + SL       GL  +A  C
Sbjct: 433 EVESL------SGLRTIAVAC 447


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 127/278 (45%), Gaps = 26/278 (9%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
           +Q++ G  H+L L SN  V++ G +  G LG+   T   V   R+  P++          
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPV-RVRDPASPTDPSKGLKA 736

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE------ALKGVPCK 219
           VQVSA  +H+  V   G  +  G N+    G+   N   F  R+ +      A KG+   
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSV--VQ 273
           QV+AG + +  +   G+ +  G N +GQLG+ +T+D   P  +    +P +    +    
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 328
           I AG  + LAV  NG  Y++G      LG G   +   P  ++         KG+   R 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           S GD H +A+ S+GY Y WG+   G LG G   D  +P
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVP 954



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 41/285 (14%)

Query: 115 QITTGRYHTLLIS-----NSSVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAH 164
           Q+   +Y+T + S     +   ++ G +  G LG    TT   S   I       P+   
Sbjct: 560 QVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDA--TTNSRSTPNIVRKPTGVPTDFT 617

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDN------------SSFCCGHRDTNRPIFRPRLVEA 212
            VQVSA + H+  +   G V+  G N            SS     RD   P       + 
Sbjct: 618 YVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANP------TDP 671

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEV 268
            KG+   QV+AG   +  L   G+V+  G N +G+LG+  T D   P  +    +P +  
Sbjct: 672 NKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPS 731

Query: 269 GSV--VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RK 321
             +  VQ++AG  + LAV  +G  Y++G  +   LG+  ++    P  ++ F       K
Sbjct: 732 KGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANK 791

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           G+  V+VSAG  H +A+ S GY Y WG    G LG+ + +D T+P
Sbjct: 792 GLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVP 836



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 26/281 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
           +Q++ G++H+L + S+  V++ GS+  G LG+  +T   V   R+  P+           
Sbjct: 619 VQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPV-RVRDPANPTDPNKGLKA 677

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCK 219
           +QVSA + H+  +  +G V+  G N +   G+  T       R+       +  KG+   
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGS---VVQ 273
           QV+AG + +  +   G+ +  G N +GQLG+        P   +  A   +       VQ
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 328
           ++AG S+ LAV  +G  Y++G  +   LG+    D   P  ++         KG+    +
Sbjct: 798 VSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAI 857

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           +AG EH +A+ ++GY Y WG      LG G   + ++P P+
Sbjct: 858 NAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPV 898



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 12/163 (7%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVY 291
           G  +  G NT+GQLG   T  R TP  +     V +    VQ++AG  + LA+  +G VY
Sbjct: 579 GKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVY 638

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           ++GS  +  LG+  + +   P  ++     T   KG+  ++VSAGDEH +ALDS+GYVY 
Sbjct: 639 AWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGYVYA 698

Query: 347 WGKGYCGALGHGDEIDKTLP----EPLSSLKSHLAVQGLSVLA 385
           WG    G LG+    D ++P    +P S       ++ + V A
Sbjct: 699 WGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSA 741



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 19/221 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAH----VV 166
           +Q++ G +H+L + S+   ++ G +  G LG+  + +        +F  P+ A+     V
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCKQ 220
           QVSA  +H+  V   G  +  G N+    G+ +T       R+       +A KG+    
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP------KSIAPLEEVGSVVQI 274
           + AG   +  +   G+ +  G N + QLG G T +   P       S A   +     + 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           + G  + LAV  NG  Y++G  S   LG G   D   P ++
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 28/195 (14%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-------V 165
           +Q++ G  H+L + S+   ++ G +  G LG+   T       R+  P++          
Sbjct: 796 VQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNS-NTVDSTVPVRVRDPTSPKDASKGLKA 854

Query: 166 VQVSASENHAAFVLQSGQVFTCG------------DNSSFCCGHRDTNRPIFRPRLVEAL 213
             ++A   H+  V  +G  +  G             NSS     RD   P       +A 
Sbjct: 855 TAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP------ADAS 908

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVV 272
           KG+   + + G + +  +   G+ +  G N++GQLG G T D   P S+   L+ V +  
Sbjct: 909 KGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLFNLQPVITAA 968

Query: 273 QIAAGPSYMLAVTGN 287
           +    P   LA   N
Sbjct: 969 RFDTSPGTNLASVSN 983


>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
 gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
          Length = 710

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 128/262 (48%), Gaps = 22/262 (8%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPET---TQCVSF--TRINFPSAAHVVQV 168
            +  G  H+L L S  +V + G++  GVLG+G +T    Q  S+    ++ P+   V  V
Sbjct: 102 DVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTVTSV 161

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +AS  ++  +  +G V   G+N     G+  TN   + P  +          + A  N  
Sbjct: 162 AASSTYSLALTATGTVLAWGNNDQGQLGN-GTNTDSYLPVPLALPAATTITAIAAATNHG 220

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G V   GSN  GQLG+G+T +  TP ++A L    ++  IAA  S+ +A+T  G
Sbjct: 221 LALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVA-LPAGTTITAIAAAGSHSMALTSTG 279

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V ++G             D + P  I      GI +  V++G++H +AL S+G V+TWG
Sbjct: 280 TVLTWG------------QDTVLP--IPIVFPAGITITAVASGNDHSLALTSTGKVFTWG 325

Query: 349 KGYCGALGHGDEIDKTLPEPLS 370
             Y G+LG+G   + ++P P S
Sbjct: 326 ANYFGSLGNGTFANSSVPVPAS 347



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 7/167 (4%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIA 263
             P  V    G     V AG   +  LT  G V   G+N +G LG+G   D      S  
Sbjct: 87  LSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYV 146

Query: 264 P----LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           P    L    +V  +AA  +Y LA+T  G V ++G+     LG+G   D   P  +    
Sbjct: 147 PAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLP--VPLAL 204

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                +  ++A   H +AL S+G V  WG    G LG+G+  +   P
Sbjct: 205 PAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTP 251



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A TG G+ +         +G     D+L P  ++     G  +  V+AG  H +AL S+G
Sbjct: 60  AATGIGLAWGRDGYGALGVGTATLDDKLSP--VRVHLPTGTTISDVAAGAVHSLALTSTG 117

Query: 343 YVYTWGKGYCGALGHGDEIDK 363
            V  WG  Y G LG+G + D 
Sbjct: 118 TVLAWGTNYYGVLGNGTKTDN 138


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 6/272 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 16/247 (6%)

Query: 73  GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-V 131
           G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S +S V
Sbjct: 109 GLDSDGQLGLLGS-----EEYIRVPRNIKSLSDI-----QIVQVACGYYHSLALSKASEV 158

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           F  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  G N 
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
               G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQLGH 
Sbjct: 219 FGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 252 DTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDE 309
            T     P+ +   E +GS+V Q+A G  +  A V  +G +YSFG G N  LG G   + 
Sbjct: 278 STSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 310 LQPRAIQ 316
             P  ++
Sbjct: 336 KSPFTVK 342


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HV-VALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H    + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +    V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 483 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 538

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 539 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 593

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 594 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 652

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 653 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 710

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 711 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 743



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGK 538

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 539 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 597

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 598 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 655

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 656 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 698



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 611 VTENGQVWSWGDGDYGKLGRG 631



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+ 
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 535


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 173
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 817

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 818 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 876

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 933

Query: 352 CGALGHGDEIDKTLPEP 368
                H D +  T PEP
Sbjct: 934 -DQCQHFDTLRVTKPEP 949



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++++++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 688 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTV-PLEEPKVISAFSGK 744

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 745 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 803

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 804 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 861

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 862 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 904



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 698

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 816

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 817 VTENGQVWSWGDGDYGKLGRG 837



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 867

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 868 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 279
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 927 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPA 968



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 699

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 700 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 746


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 12/246 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L +   V+S G    G LGHG  T   +  T I+   +  V +++    H+  V
Sbjct: 220 GRHAMALTAEGKVYSWGCGDRGQLGHG-NTLGYLDPTLIDELKSKEVTKIACGAMHSIAV 278

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           L  G++F+ GD S+   GH + N     P+ + +L G     V  G  +T  + + G  V
Sbjct: 279 LSDGKIFSWGDGSNGALGHGN-NLAQLLPKKIMSLNGKHIMAVACGECYT--IAVAGDDV 335

Query: 238 HTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G   +G+LG+G  ++ P+   P  I  L   G +  +A G +   AV+ NG V+++G
Sbjct: 336 WSWGLGGNGELGYG--VEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWG 392

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG  F LG G +   ++PR IQ    KG  + RV A   H +A+D +G VY WG    G 
Sbjct: 393 SGDRFRLGLGNEKVIVKPREIQG-DLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGP 451

Query: 355 LGHGDE 360
           +G+ ++
Sbjct: 452 VGNDED 457



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 9/187 (4%)

Query: 178 VLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           V ++G +F CG     C G     D N P   P+L+  +  V    +  G      LT  
Sbjct: 172 VSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVM--VTTVAIHPGGRHAMALTAE 229

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V++ G    GQLGHG+TL    P  I  L+    V +IA G  + +AV  +G ++S+G
Sbjct: 230 GKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKS-KEVTKIACGAMHSIAVLSDGKIFSWG 288

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            GSN  LGHG    +L P+ I +    G H++ V+ G+ + +A+ +   V++WG G  G 
Sbjct: 289 DGSNGALGHGNNLAQLLPKKIMSLN--GKHIMAVACGECYTIAV-AGDDVWSWGLGGNGE 345

Query: 355 LGHGDEI 361
           LG+G E+
Sbjct: 346 LGYGVEM 352



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 5/208 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+ S ++ +    ++  +V+  G   +      + N     P   + L+ +    +  G 
Sbjct: 109 VEKSRTDPYKEMRVEPSEVYVWGSKRNLLLAADEKNP--LEPDKSKLLENLDPSDIACGY 166

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 284
           +    ++  G +  CG    G LG G+  D   P+ I  L  V  + V I  G  + +A+
Sbjct: 167 DSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMAL 226

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VYS+G G    LGHG     L P  I   + K   V +++ G  H +A+ S G +
Sbjct: 227 TAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSK--EVTKIACGAMHSIAVLSDGKI 284

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           ++WG G  GALGHG+ + + LP+ + SL
Sbjct: 285 FSWGDGSNGALGHGNNLAQLLPKKIMSL 312



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 49/102 (48%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G   +  V+ NG +++ G G   CLG G   D   PR I       +  V +  G 
Sbjct: 161 DIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGG 220

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            H +AL + G VY+WG G  G LGHG+ +    P  +  LKS
Sbjct: 221 RHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKS 262



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 3/198 (1%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I  G  H++ ++S+  +FS G    G LGHG    Q +   +I   +  H++ V+  E 
Sbjct: 267 KIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLP-KKIMSLNGKHIMAVACGEC 325

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +    +    V++ G   +   G+       + P  +EAL       V  G   +  ++ 
Sbjct: 326 YT-IAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSA 384

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   GS    +LG G+      P+ I    +   + ++ A   + LA+  NG VY +
Sbjct: 385 NGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIW 444

Query: 294 GSGSNFCLGHGEQHDELQ 311
           GS     +G+ E   + Q
Sbjct: 445 GSQEIGPVGNDEDAKQQQ 462



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           M +  G  +T+ ++   V+S G    G LG+G E       T+I       +  V+    
Sbjct: 318 MAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYA 377

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLT 232
            +  V  +G+V+  G    F  G     + I +PR ++  LKG   K+V A L     + 
Sbjct: 378 TSFAVSANGKVWAWGSGDRFRLG-LGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAID 436

Query: 233 IRGHVHTCGSNTHGQLGHGD 252
             G V+  GS   G +G+ +
Sbjct: 437 ENGQVYIWGSQEIGPVGNDE 456


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 18/226 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  T+  G LGHG+ +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                     S+G ++TWG G    LGHGD+  +  P  +++L  H
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 132/303 (43%), Gaps = 23/303 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVL 368

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRS 398
            +   V+TWGKG  G LGHGD  D+ +P  + +LK   AV+ ++  A     I Q    S
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDR-AVRYIACGANFTAAICQYKWVS 427

Query: 399 CSD 401
            +D
Sbjct: 428 GAD 430



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 11/131 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V  +  G  +   V  NG V+++G  S   LGHG + D ++PR +++    
Sbjct: 70  PLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS 129

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +  V  + G+ H  A+ ++G +YTWG G    G LGHG+++   +P+ +S      A++
Sbjct: 130 NVDFV--ACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISG-----ALE 182

Query: 380 GLSVLAEVCPT 390
           GL V    C T
Sbjct: 183 GLQVAYVSCGT 193


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 125/272 (45%), Gaps = 6/272 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            A   SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Papio anubis]
          Length = 932

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A   SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +Y +G G  G LG G   +   P P+ 
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 4/161 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           V +S G+EH   L  SG V+T+G G CG LGH    D+  P
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 167



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQ 316
            P+ I  L +  +++Q++ G  + LA+  +G  +++G  S+  LG G++   +  P+ ++
Sbjct: 9   VPRLIQKLNQ-QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 67

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           +   +GI + +V+AG  H  AL  SG V+ WG    G LG  DE D+  P  +  L++  
Sbjct: 68  SL--EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 125

Query: 377 AV 378
            V
Sbjct: 126 VV 127



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +       VV +S  E 
Sbjct: 76  QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR-ESPCHVKLLRTQKVVYISCGEE 134

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G   T  F+ 
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVP 193

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G    GQLG G T +   P  +
Sbjct: 194 SSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Nomascus leucogenys]
          Length = 932

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A   SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +Y +G G  G LG G   +   P P+ 
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 4/161 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           V +S G+EH   L  SG V+T+G G CG LGH    D+  P
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 167



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQ 316
            P+ I  L +  +++Q++ G  + LA+  +G  +++G  S+  LG G++   +  P+ ++
Sbjct: 9   VPRLIQKLNQ-QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 67

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           +   +GI + +V+AG  H  AL  SG V+ WG    G LG  DE D+  P  +  L++  
Sbjct: 68  SL--EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 125

Query: 377 AV 378
            V
Sbjct: 126 VV 127



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +       VV +S  E 
Sbjct: 76  QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR-ESPCHVKLLRTQKVVYISCGEE 134

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G   T  F+ 
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVP 193

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G    GQLG G T +   P  +
Sbjct: 194 SSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 140/320 (43%), Gaps = 30/320 (9%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I E     +++   G +HT  ++ S     +  G    G+LG G   +      
Sbjct: 344 VPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVR 403

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            +      +V  +S    H AFV  +G++FT GD +    GH D       PR VEAL G
Sbjct: 404 ILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNI-PREVEALNG 462

Query: 216 VPCKQV---------TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             C+ +          A ++  G  +  G + T G    G+LGHGD   R  P S+  L+
Sbjct: 463 --CRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELD 520

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHV 325
              S  Q+A G S  +A++ +G VY+ G+          Q D ++ P  I+    K   V
Sbjct: 521 TT-SFQQVACGQSITVALSMSGQVYAMGTADP------SQDDVVRAPSCIEGGLGKSF-V 572

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLS 382
             V+ G  H+  L+S   VYTWGKG  G LGHGD   + +P  + +LK       V G +
Sbjct: 573 QEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGSN 632

Query: 383 VLAEVC--PTIVQEDTRSCS 400
             A +C    I   D+  CS
Sbjct: 633 YTATICLHKPITGTDSSRCS 652



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 12/216 (5%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S   N+A  V + GQ+++ G+ S    GH   +  +  P+L++   G   +    G   
Sbjct: 309 ISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSY-VPHPKLIDEFDGSTVELADCGEFH 367

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           T  +T  G ++  G   H  G LG G       P  I    E  +V  I+ GP +   VT
Sbjct: 368 TCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVT 427

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------- 338
             G +++FG G+   LGHG++     PR ++     G   +R + G  H  A+       
Sbjct: 428 SAGKLFTFGDGTFGALGHGDRISTNIPREVEAL--NGCRTIRTACGVWHSAAVVSVFGEA 485

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            SSG ++TWG G  G LGHGD   + +P  ++ L +
Sbjct: 486 SSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDT 521



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 6/171 (3%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+++++   +  + ++ G N+   +T +G +++ G  + G+LGHG     P PK I  
Sbjct: 293 FLPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDE 352

Query: 265 LEEVGSVVQIA-AGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +  GS V++A  G  +  AVT +G +Y++G G +    LG G      +P  I   + +
Sbjct: 353 FD--GSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILG-QME 409

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           GI+V  +S G  H   + S+G ++T+G G  GALGHGD I   +P  + +L
Sbjct: 410 GINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEAL 460


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 454 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 509

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 510 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 564

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 565 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 623

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 624 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 681

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 682 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 714



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 453 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 509

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 510 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 568

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 569 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 626

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 627 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 669



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 463

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 523

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 524 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 581

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 582 VTENGQVWSWGDGDYGKLGRG 602



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 692 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 737



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 464

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 465 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 511


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 10/214 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +++VS  E+H   +   G V+ CG+N     G+ +T   I  P  VE L  V    ++AG
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNT-IDINSPIPVEGLNKV--SSISAG 233

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             ++  L   G V T G N +GQLG G T  R +P     ++ +  ++ I++G S+ LA+
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSP---VQVQNLSGIIAISSGNSHSLAL 290

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++G   +  LG G  + +  P  +Q        +V +S G  + +AL + G V
Sbjct: 291 KDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS----GIVSISCGFYYSMALKNDGTV 346

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + WG    G LG G   D+    P+S L   +A+
Sbjct: 347 WVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAI 380



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 7/162 (4%)

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           P  +V+ G + T  L   G V  CG N +GQLG+ +T+D  +P    P+E +  V  I+A
Sbjct: 176 PIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSP---IPVEGLNKVSSISA 232

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y +A+  +G V+++G      LG G     L P  +Q        ++ +S+G+ H +
Sbjct: 233 GKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLS----GIIAISSGNSHSL 288

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           AL   G V+ WG    G LG G    K +P  +  L   +++
Sbjct: 289 ALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSI 330



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 22/270 (8%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 168
           ++++ G  HTL L S+ +V++CG +  G LG+        +   IN P        V  +
Sbjct: 178 IKVSGGESHTLALESDGTVWACGENDYGQLGNN-------NTIDINSPIPVEGLNKVSSI 230

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           SA + ++  +   G V+T G+N     G   T   +  P  V+ L G+    +++G + +
Sbjct: 231 SAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL-SPVQVQNLSGIIA--ISSGNSHS 287

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N  GQLG G T  +  P  +  L     +V I+ G  Y +A+  +G
Sbjct: 288 LALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS---GIVSISCGFYYSMALKNDG 344

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  ++  LG G   D  +  A+      G  V+ ++ G  H +AL + G V+TWG
Sbjct: 345 TVWVWGDNTSGQLGDGTTTD--RNTAVPVSGLDG--VIAIACGVNHSMALRNDGTVWTWG 400

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               G LG G ++ K    P+S L   +A+
Sbjct: 401 FNAFGQLGDGTKVSKNTAVPISGLDGIIAI 430



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 18/264 (6%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + I  G  H++ + N  +V++ G +  G LG G   T+    T +       ++ ++ 
Sbjct: 376 GVIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDG---TKVSKNTAVPISGLDGIIAITC 432

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H+  +   G V+  GDN     G+  T      P  V  L G+  K +  G + +  
Sbjct: 433 GTSHSMALKDDGTVWAWGDNQYGQLGNG-TFISNTTPSQVSNLSGI--KSIFCGYSTSFA 489

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
           L   G V   G+N +G+LG G      T + I P E   +G +  I+ G S+ LA+  +G
Sbjct: 490 LKPDGTVWAWGNNEYGELGKG-----FTTRVIYPTETLNIGDIKAISIGSSHCLALKNDG 544

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      LG G    +  P  +Q     GI    +SAG  H +AL S G V+ WG
Sbjct: 545 TVWAWGDNRYGQLGDGTTTIKSLP--VQVSGISGI--TAISAGGSHSLALKSDGTVWAWG 600

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
           +   G LG G + D+  P  +S L
Sbjct: 601 QNNVGQLGDGTKEDRNTPVQVSEL 624



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 26/279 (9%)

Query: 107 VETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + I+ G Y+++ + N  +V+  G +  G LG G  T +    T +       V
Sbjct: 321 VQGLSGIVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRN---TAVPVSGLDGV 377

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQ 220
           + ++   NH+  +   G V+T G N+    G      ++T  PI        L G+    
Sbjct: 378 IAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVPI------SGLDGIIA-- 429

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +T G + +  L   G V   G N +GQLG+G  +   TP  ++ L  + S   I  G S 
Sbjct: 430 ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKS---IFCGYST 486

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALD 339
             A+  +G V+++G+       +GE       R I       I  ++ +S G  H +AL 
Sbjct: 487 SFALKPDGTVWAWGNNE-----YGELGKGFTTRVIYPTETLNIGDIKAISIGSSHCLALK 541

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           + G V+ WG    G LG G    K+LP  +S +    A+
Sbjct: 542 NDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGITAI 580



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 27/259 (10%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA----AHVVQVSASENHAAFVLQ 180
           L  + +V++ G++  G LG G  T       R+ +P+       +  +S   +H   +  
Sbjct: 490 LKPDGTVWAWGNNEYGELGKGFTT-------RVIYPTETLNIGDIKAISIGSSHCLALKN 542

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  GDN     G   T      P  V  + G+    ++AG + +  L   G V   
Sbjct: 543 DGTVWAWGDNRYGQLGDGTTTIKSL-PVQVSGISGITA--ISAGGSHSLALKSDGTVWAW 599

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF 299
           G N  GQLG G   DR TP  ++   E+  +  I+       A+  +G V+ +GS S N 
Sbjct: 600 GQNNVGQLGDGTKEDRNTPVQVS---ELSGITVISNCIYRSFALKNDGTVWVWGSDSYNL 656

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            L       E     IQ     GI  + +  G  H +AL + G V+ WGK   G  G G 
Sbjct: 657 PL-------EKMTMPIQISGLSGI--IAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGT 707

Query: 360 EIDKTLPEPLSSLKSHLAV 378
                +P  +S L    A+
Sbjct: 708 TTTTNIPVQVSGLSGVKAI 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 117/307 (38%), Gaps = 69/307 (22%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H L + N  +V++ G +  G LG G  T + +    +     + +  +SA  +H
Sbjct: 530 ISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLP---VQVSGISGITAISAGGSH 586

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVE------------ALKG---- 215
           +  +   G V+  G N+    G     D N P+    L              ALK     
Sbjct: 587 SLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTV 646

Query: 216 ---------VPCKQVTAGLNFTGF---------------LTIRGHVHTCGSNTHGQLGHG 251
                    +P +++T  +  +G                L   G V   G N  GQ G G
Sbjct: 647 WVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDG 706

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            T     P  ++ L  V +   IA G +  +A+  +G V+ +G               + 
Sbjct: 707 TTTTTNIPVQVSGLSGVKA---IAVGGNRSIALKSDGTVWQWG----------RILVSVS 753

Query: 312 PRAIQTF----RRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P  ++T+    +  G+  +V +S    + VAL + G V+TWG    G LG G    +   
Sbjct: 754 PSTVETWTTARQVDGLSEIVSIS----NNVALKNDGKVFTWGANDYGQLGDGTTTARVTV 809

Query: 367 EPLSSLK 373
            P+S L+
Sbjct: 810 APVSGLE 816



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 111 AGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + I  G YH L + N  +V++ G +  G  G G  TT  +    +     + V  ++
Sbjct: 671 SGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIP---VQVSGLSGVKAIA 727

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              N +  +   G V+  G           T       R V+ L  +    V+   N   
Sbjct: 728 VGGNRSIALKSDGTVWQWG--RILVSVSPSTVETWTTARQVDGLSEI----VSISNNVA- 780

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V T G+N +GQLG G T  R T   +AP+  +  V  +A+  +  + +  +G 
Sbjct: 781 -LKNDGKVFTWGANDYGQLGDGTTTARVT---VAPVSGLEGVAGVASSDTTSMVLMNDGT 836

Query: 290 VYSFGSGSNFCLGHGEQ 306
           + ++G  +   LG+GE+
Sbjct: 837 IRAWGKNNFGQLGNGER 853


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 28/293 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
           S   V+TWGKG  G LGHGD  D+ +P  + +L+     H+A  G +  A +C
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIAC-GANFTAAIC 418



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASL 296



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 7/199 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGL 381
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+     G+
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 382 SVLAEVCPTIVQEDTRSCS 400
              A +   IV + + + S
Sbjct: 246 WHTAAIVEVIVTQSSATVS 264



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P  +S       ++GL +    C T
Sbjct: 172 WIPRRISG-----PLEGLQIAYVSCGT 193


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 122/266 (45%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NSSV SCG +  G LG         PE  Q +   + N       
Sbjct: 26  LQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  L  + +P+ +  LE +  V Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI-PVAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+     K  P+
Sbjct: 255 GKVFTFGDNSSGQLGYNPTPKKRGPQ 280



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 9/217 (4%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDL-PEPVQALKTLKFNLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI V +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSL--EGIPVAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
            G  + WG    G L   G   ++    P  + +LK+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKN 235



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 5/168 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE +     P+ I T    GI ++
Sbjct: 75  LKFNL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL--TGIKII 131

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
           +VS G  H +AL     V++WGK   G LG G E+  +  P+ + SL+
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLE 179


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 125/272 (45%), Gaps = 6/272 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            A   SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 278 STSHEINPRKVFELMGSIVTQ 298



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAV 378
           L+S   V
Sbjct: 239 LRSQKIV 245



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 105/222 (47%), Gaps = 8/222 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 11  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK---KPDQVGALDA 67

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 68  QTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI-QIVQV 126

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    +YS+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 127 ACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL--AGIPFAHIAAGGG 184

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S 
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQ 226



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I       +VQV+   +H
Sbjct: 73  VSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHH 132

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     +    PR +++L G+P   + AG   +  LT+ 
Sbjct: 133 SLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMS 192

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 193 GAIFGWGRNKFGQLGLNDETDRSAPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 251

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 252 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 309

Query: 354 ALGHGDEIDKTLP 366
            LG G   ++  P
Sbjct: 310 QLGTGSTSNRKSP 322



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 7/261 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 28  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKP---DQVGALDAQTIVAVSCGEAHTLALN 84

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+    +++
Sbjct: 85  DKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYS 144

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G  + + + P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGI-PFAHIAAGGGHSFALTMSGAIFGWGRNKF 203

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 204 GQLGLNDETDRSAPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 261

Query: 359 DEIDKTLPEPLSSLKSHLAVQ 379
               +  P  +  L   +  Q
Sbjct: 262 STNHEVNPRKVFELMGSIVTQ 282



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 11/183 (6%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P  + 
Sbjct: 6   VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RKKPDQVG 63

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 64  AL-DAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY--D 120

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLK----SHLA 377
           I +V+V+ G  H +AL     +Y+WG+   G LG G EI K + P  + SL     +H+A
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180

Query: 378 VQG 380
             G
Sbjct: 181 AGG 183



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S ++S G +  G LG G E  +  +   I   +      ++A  
Sbjct: 124 VQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGG 183

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 184 GHSFALTMSGAIFGWGRNKFGQLGLNDETDRS--APALLKSLRSQKIIHICCGEDHTAAL 241

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 242 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 299

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 300 IYSFGLGGNGQLGTGSTSNRKSPFTVK 326


>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
 gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pan paniscus]
 gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Gorilla gorilla gorilla]
 gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
          Length = 932

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A   SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +Y +G G  G LG G   +   P P+ 
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 4/161 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           V +S G+EH   L  SG V+T+G G CG LGH    D+  P
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 167



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQ 316
            P+ I  L +  +++Q++ G  + LA+  +G  +++G  S+  LG G++   +  P+ ++
Sbjct: 9   VPRLIQKLNQ-QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 67

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           +   +GI + +V+AG  H  AL  SG V+ WG    G LG  DE D+  P  +  L++  
Sbjct: 68  SL--EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 125

Query: 377 AV 378
            V
Sbjct: 126 VV 127



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +       VV +S  E 
Sbjct: 76  QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR-ESPCHVKLLRTQKVVYISCGEE 134

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G   T  F+ 
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVP 193

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G    GQLG G T +   P  +
Sbjct: 194 SSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|8778856|gb|AAF79855.1|AC000348_8 T7N9.12 [Arabidopsis thaliana]
          Length = 441

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 4/198 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           N    +   G+VFT G  SS   GH D    I  P+LV         Q  AG + +GF++
Sbjct: 85  NILIMLFAGGKVFTWGRGSSGQLGHGDILN-ITLPKLVSFFDDSVITQAAAGWSHSGFVS 143

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G + TCG+ + GQLGHGDTL   TP  ++      SV  +A G  + L +     V  
Sbjct: 144 DSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNN-DSVKMVACGMRHSLVLFAGNQVCG 202

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FGSG    LG      +           K + VVR+SA  +H  A+ + G  ++WG+G+C
Sbjct: 203 FGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFC 262

Query: 353 GALGHGDEIDKTLPEPLS 370
           G  G      ++LP PLS
Sbjct: 263 G--GPDVHAPQSLPSPLS 278



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 124/324 (38%), Gaps = 82/324 (25%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L +   VF+ G    G LGHG +         ++F   + + Q +A  +H+ FV  SG 
Sbjct: 89  MLFAGGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGC 147

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FTCG+ S    GH DT   +  P  V        K V  G+  +  L     V   GS 
Sbjct: 148 IFTCGNGSFGQLGHGDT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSG 206

Query: 244 THGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             GQLG      +    P  ++ L++V  VV+I+A   +  A++ +G  +S+G G  FC 
Sbjct: 207 KRGQLGFSSDRIKSVNLPCVVSGLKDV-EVVRISANGDHSAAISADGQFFSWGRG--FCG 263

Query: 302 G------------------------------HGE------------QHDELQPRAIQTFR 319
           G                               GE            +  +LQ  + +   
Sbjct: 264 GPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF 323

Query: 320 RK-----GIHVVRVSAGDEHVVA----------------------------LDSSGYVYT 346
            K     G+ V++++AG EH  A                            L  +G V T
Sbjct: 324 EKVPDFDGVKVMQIAAGAEHSAAVTGKRGGAILLFLSSLHSANIKQTTFECLAENGEVKT 383

Query: 347 WGKGYCGALGHGDEIDKTLPEPLS 370
           WG G  G LG G+  D+T PE +S
Sbjct: 384 WGWGEHGQLGLGNTNDQTSPELVS 407



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 25/115 (21%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPR--------AIQTFRRKGIHVVRVSAGDEH------- 334
           V+S+G+G++  LG  +  DEL P+        +I      G HV+ +++G          
Sbjct: 17  VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGKPPKISLIKG 76

Query: 335 ----------VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                     ++ L + G V+TWG+G  G LGHGD ++ TLP+ +S     +  Q
Sbjct: 77  MLLVLVQVNILIMLFAGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQ 131


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 59/308 (19%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNS------------------------------------------- 191
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 367 EPLSSLKS 374
             + S+++
Sbjct: 342 RMIDSVEN 349



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 24/259 (9%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 181
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPET---VQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            D   P  + ++ S + V+
Sbjct: 234 RDVINPREVPNINSVVVVE 252



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 11/177 (6%)

Query: 100 VEHSSDIVE--TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           + HS   VE   S   +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R
Sbjct: 183 IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR 240

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
              P+   VV V   ++H+  +   G+VF+CG +S     CG    ++   R   +  + 
Sbjct: 241 -EVPNINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEML 297

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           G    ++  G   T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 298 GSHVTRIACGRCHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 59/308 (19%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNSS------------------------------------------ 192
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 193 -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 367 EPLSSLKS 374
             + S+++
Sbjct: 342 RMIDSVEN 349



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 24/259 (9%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 181
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPET---VQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            D   P  + ++ S + V+
Sbjct: 234 RDVINPREVPNINSVVVVE 252



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 11/177 (6%)

Query: 100 VEHSSDIVE--TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           + HS   VE   S   +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R
Sbjct: 183 IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR 240

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
              P+   VV V   ++H+  +   G+VF+CG +S     CG    ++   R   +  + 
Sbjct: 241 -EVPNINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEML 297

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           G    ++  G   T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 298 GSHVTRIACGRCHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 31/320 (9%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I E +   +++   G +HT  ++ S     +  G    G+LG G   +      
Sbjct: 336 VPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVR 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            +      +V  +S    H AFV   G++FT GD +    GH D       PR VEAL G
Sbjct: 396 ILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI-PREVEALNG 454

Query: 216 VPCKQVTAG---------LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             C+ + A          ++  G  T  G + T G    G+LGHGD   R  P  +  L+
Sbjct: 455 --CRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELD 512

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHV 325
              S  Q+A G S  +A++ +G VY+ G+           HD ++ P  I+    K   V
Sbjct: 513 TT-SFQQVACGQSITVALSMSGQVYAMGTAD-------PSHDIVRAPSCIEGGLGKSF-V 563

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLS 382
             V+ G  H+  L+S   VYTWGKG  G LGHGD   + +P  + +LK       V G +
Sbjct: 564 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 623

Query: 383 VLAEVC--PTIVQEDTRSCS 400
             A +C    I   D+  CS
Sbjct: 624 YTATICLHKPITGTDSTKCS 643



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 6/171 (3%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+++++   +  + ++ G N+   +T +G +++ G  + G+LGHG     P PK I  
Sbjct: 285 FLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 344

Query: 265 LEEVGSVVQIA-AGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
               GS V++A  G  +  AVT +G +Y++G G +    LG G      +P  I   + +
Sbjct: 345 FN--GSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILG-QME 401

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           GI+V  +S G  H   + S G ++T+G G  GALGHGD I   +P  + +L
Sbjct: 402 GIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEAL 452



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 12/216 (5%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S   N+A  V + GQ+++ G+ S    GH   +  +  P+L++   G   +    G   
Sbjct: 301 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSY-VPHPKLIDEFNGSTVELADCGEFH 359

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           T  +T  G ++  G   H  G LG G       P  I    E   V  I+ GP +   VT
Sbjct: 360 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 419

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------- 338
             G +++FG G+   LGHG++     PR ++     G   ++ + G  H  A+       
Sbjct: 420 SEGKLFTFGDGTFGALGHGDRISTNIPREVEAL--NGCRTIKAACGVWHSAAVVSVFGEA 477

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            SSG ++TWG G  G LGHGD   + +P  ++ L +
Sbjct: 478 TSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDT 513


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 4/208 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G S+   
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDD-QKVEFLACGGSHTAL 271

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-G 342
           +T +G+V++FG G    LGH    +EL+P  +      G  V +++ G +H +A  S  G
Sbjct: 272 LTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGL--VGNRVTQIACGRQHTLAYVSDMG 329

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            V+++G G  G LG+G   ++ +P P+ 
Sbjct: 330 KVFSFGSGKEGQLGNGGTCNQLMPRPMK 357



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 112/231 (48%), Gaps = 11/231 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 132 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 191

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--P 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N    CG         +  P
Sbjct: 192 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRND---CGQLGLGHTYNKDSP 248

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +EAL     + +  G + T  LT  G V T G   +GQLGH  T +   P  +A L  
Sbjct: 249 SCIEALDDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGL-- 306

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR ++
Sbjct: 307 VGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMK 357



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 328
           +++QI  G  + LA++  G ++++G   +  LG G        P  ++     G+ +V++
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL--SGVPLVQI 210

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SAG+ H +AL  SG VY+WG+  CG LG G   +K  P  + +L
Sbjct: 211 SAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEAL 254


>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
          Length = 932

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +Y +G G  G LG G   +   P P+ 
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 4/161 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           V +S G+EH   L  SG V+T+G G CG LGH    D+  P
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 167



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQ 316
            P+ I  L +  +++Q++ G  + LA+  +G  +++G  S+  LG G++   +  P+ ++
Sbjct: 9   VPRLIQKLNQ-QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 67

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +   +GI + +V+AG  H  AL  SG V+ WG    G LG  DE D+  P
Sbjct: 68  SL--EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP 115



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +       VV +S  E 
Sbjct: 76  QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR-ESPCHVKLLRTQKVVYISCGEE 134

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G   T  F+ 
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVP 193

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G    GQLG G T +   P  +
Sbjct: 194 SSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 483 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 538

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 539 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 593

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 594 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 652

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 653 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 710

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 711 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 743



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 538

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 539 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 597

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 598 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 655

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 656 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 698



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 611 VTENGQVWSWGDGDYGKLGRG 631



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+ 
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 535


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 8/246 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  H L +S    V+S G    G LGHG +++ C     I       VV V+    H
Sbjct: 673 VNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGGAH 731

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLT 232
           +A +  SG+++T G       GH D++  + RP+ VEAL G  V C    +G   T  +T
Sbjct: 732 SACITASGELYTWGKGRYGRLGHGDSDDQL-RPKKVEALSGWRVRCVACGSGDAQTLCVT 790

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
               V + G   +G+LG G +     P  +  L+ +G V+++  G  + +A+T +G VY+
Sbjct: 791 DDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMG-VIRVECGSQFSVALTASGSVYT 849

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LGHG      +P+ +     +G  V+ ++ G  H VA   +G VYTWG    
Sbjct: 850 WGKGDYHRLGHGTDDHVRRPKRVAAL--QGKKVICIAVGSLHCVACTDTGEVYTWGDNDE 907

Query: 353 GALGHG 358
           G LG G
Sbjct: 908 GQLGDG 913



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 8/211 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + +    RPR++E+L+G     V  G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGG 729

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---GPSYML 282
             +  +T  G ++T G   +G+LGHGD+ D+  PK +  L   G  V+  A   G +  L
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALS--GWRVRCVACGSGDAQTL 787

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT +  V+S+G G    LG G       P  +     +G+ V+RV  G +  VAL +SG
Sbjct: 788 CVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLL--QGMGVIRVECGSQFSVALTASG 845

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG +     P+ +++L+
Sbjct: 846 SVYTWGKGDYHRLGHGTDDHVRRPKRVAALQ 876



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   QV  G      +T  G V+  G    G+LG G T     P  +  L+
Sbjct: 605 PMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQ 664

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G G +  LGHG +    +PR I++ R  G  V
Sbjct: 665 HVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLR--GKEV 722

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           V V+ G  H   + +SG +YTWGKG  G LGHGD  D+  P+ + +L
Sbjct: 723 VDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEAL 769



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 4/200 (2%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           SA   +QV   E     V   G+V+  G  +    G   T+  +  P L+E+L+ V  K+
Sbjct: 612 SALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VSCPTLLESLQHVFIKK 670

Query: 221 V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +A G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRG-KEVVDVACGG 729

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++   +T +G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD   + +
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCV 789

Query: 339 DSSGYVYTWGKGYCGALGHG 358
                V++WG G  G LG G
Sbjct: 790 TDDDCVWSWGDGDYGKLGRG 809



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G +   G N  GQLG   G  +  P P ++++ L  +    Q+  G   + AVT +G VY
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPI----QVVGGEQTLFAVTADGKVY 636

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL + G VY+WG+G 
Sbjct: 637 ATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LGHG++     P  + SL+    V
Sbjct: 697 DGKLGHGNKSSCERPRVIESLRGKEVV 723



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++   V+S G    G LG G  +  C    R++      V++V      + 
Sbjct: 781 SGDAQTLCVTDDDCVWSWGDGDYGKLGRG-GSDGCKVPLRVDLLQGMGVIRVECGSQFSV 839

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            +  SG V+T G       GH  T+  + RP+ V AL+G     +  G       T  G 
Sbjct: 840 ALTASGSVYTWGKGDYHRLGH-GTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGE 898

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           V+T G N  GQLG G       P+ +A L+
Sbjct: 899 VYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 31/320 (9%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I E +   +++   G +HT  ++ S     +  G    G+LG G   +      
Sbjct: 339 VPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVR 398

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            +      +V  +S    H AFV   G++FT GD +    GH D       PR VEAL G
Sbjct: 399 ILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI-PREVEALNG 457

Query: 216 VPCKQVTAG---------LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             C+ + A          ++  G  T  G + T G    G+LGHGD   R  P  +  L+
Sbjct: 458 --CRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELD 515

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHV 325
              S  Q+A G S  +A++ +G VY+ G+           HD ++ P  I+    K   V
Sbjct: 516 TT-SFQQVACGQSITVALSMSGQVYAMGTAD-------PSHDIVRAPSCIEGGLGKSF-V 566

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HLAVQGLS 382
             V+ G  H+  L+S   VYTWGKG  G LGHGD   + +P  + +LK       V G +
Sbjct: 567 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 626

Query: 383 VLAEVC--PTIVQEDTRSCS 400
             A +C    I   D+  CS
Sbjct: 627 YTATICLHKPITGTDSTKCS 646



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 6/171 (3%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+++++   +  + ++ G N+   +T +G +++ G  + G+LGHG     P PK I  
Sbjct: 288 FLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 347

Query: 265 LEEVGSVVQIA-AGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
               GS V++A  G  +  AVT +G +Y++G G +    LG G      +P  I   + +
Sbjct: 348 FN--GSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILG-QME 404

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           GI+V  +S G  H   + S G ++T+G G  GALGHGD I   +P  + +L
Sbjct: 405 GIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEAL 455



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 12/216 (5%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S   N+A  V + GQ+++ G+ S    GH   +  +  P+L++   G   +    G   
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSY-VPHPKLIDEFNGSTVELADCGEFH 362

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           T  +T  G ++  G   H  G LG G       P  I    E   V  I+ GP +   VT
Sbjct: 363 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 422

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------- 338
             G +++FG G+   LGHG++     PR ++     G   ++ + G  H  A+       
Sbjct: 423 SEGKLFTFGDGTFGALGHGDRISTNIPREVEAL--NGCRTIKAACGVWHSAAVVSVFGEA 480

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            SSG ++TWG G  G LGHGD   + +P  ++ L +
Sbjct: 481 TSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDT 516


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 492 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 548 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 602

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 603 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 661

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 719

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 720 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 547

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   +G+LGHG + D   P  +A L+ +  V+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVI 606

Query: 273 QIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +A  +G +  LAVT NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 664

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 20/201 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +  +G V++WG G  G LG G
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG 640



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+ 
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 544


>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 110/221 (49%), Gaps = 7/221 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R + P A  VV VSA  +H+  +L    + + G       GH D    +    L      
Sbjct: 17  REDPPPA--VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74

Query: 216 VP-CKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            P    V  G + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + Q
Sbjct: 75  APGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KIKQ 133

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           IA G S+ LAVT  G V S+G   N  LG G   D L P+ IQ+F  +G+ V  ++AG E
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSF--EGVCVKMIAAGAE 191

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           H  A+   G +Y WG G  G LG GD  D+ +PE +SS+++
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEN 232


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 19/290 (6%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCV 152
           +R L  VE + + ++      QI  GR+H+ +L+ + SVFSCG++    LGH     +  
Sbjct: 39  VRSLTLVESTKNFLKIR----QIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPN 94

Query: 153 SFTRINFP-------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN--RP 203
            +  +++           HV+ V+  + H   +   G +F+ G N     G    N    
Sbjct: 95  LYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAK 154

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
              PR+ E +      Q+  G N +  L +  G +H  G N HGQLG G       P ++
Sbjct: 155 ARYPRIQE-INLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTV 213

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L  +  + Q+AAG S+ L +T +G V+ +G      +G  EQ D L P  ++  R + 
Sbjct: 214 NKLMGI-PICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQ- 271

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             V+R++ G++  VA+ ++G ++T+G G  G LGHG++  +  P+ +  L
Sbjct: 272 -KVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMEL 320



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 18/275 (6%)

Query: 91  KRVLRFLQSVEHSSDIVETSAG--NMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPE 147
           KR     +++    D+ ++  G   + +  G  H + ++N   +FS GS++ G LG   E
Sbjct: 90  KRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLG--VE 147

Query: 148 TTQCVS---FTRINFPSAAHVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTN 201
               V+   + RI   + A++VQ++   NH+  +  +  V   +   D+     G R++ 
Sbjct: 148 RMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRES- 206

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
                P  V  L G+P  Q+ AG + +  LT  G V   G N  GQ+G  +  D   P S
Sbjct: 207 --FIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYP-S 263

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L     V+++A G  + +AVT  G +++FG+G+   LGHG Q+ EL P+  Q     
Sbjct: 264 LVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPK--QVMELM 321

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           G  V+ V+ G  H +A+ +   +Y +G    G LG
Sbjct: 322 GSVVLDVACGRCHTLAI-TENKLYAFGLNTSGQLG 355



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV---QIAAGPSYMLAVTGNGVVYSFGSG 296
           CG+ + GQLG G   +    +S+  +E   + +   QIA G  + + +  +G V+S G+ 
Sbjct: 21  CGNTSDGQLGLGGIAEENV-RSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNN 79

Query: 297 SNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
             + LGH         ++ L           GIHV+ V+ GD H VAL + G++++WG  
Sbjct: 80  DFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSN 139

Query: 351 YCGALG 356
             G LG
Sbjct: 140 VYGQLG 145



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 10/192 (5%)

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKG-VPCKQVTAGLNFTGFLTIR 234
            +L+S  +  CG+ S    G         R   LVE+ K  +  +Q+  G + +  L   
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGS------VVQIAAGPSYMLAVTGN 287
           G V +CG+N   QLGH     +P   +++    +V        V+ +A G ++ +A+T +
Sbjct: 71  GSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTND 130

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYT 346
           G ++S+GS     LG    +   + R  +       ++V+++ G  H +AL+S+ G ++ 
Sbjct: 131 GHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHA 190

Query: 347 WGKGYCGALGHG 358
           WG    G LG G
Sbjct: 191 WGLNDHGQLGIG 202


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 50  NDEIFVLGTNCCGCLGLG-DIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 108

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN       +   L      +V  G   +  LT  G V   G N  G
Sbjct: 109 WGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSG 168

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 169 QVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSS 228

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +   P  I     +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 229 GNHSTPCRIAAL--QGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYP 286

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 287 TPVVVEKDRI 296



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   ++  + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 42  NEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 99

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 100 ATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 159

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 160 FAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRV-VVNIACGQMCSMAVVDSGEVYVWGYN 218

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   + + P  +++L+
Sbjct: 219 GNGQLGLGSSGNHSTPCRIAALQ 241



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 6/171 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   ++T+   +   G+N  G LG GD      P+
Sbjct: 18  PIFSLCSEEELQLIRQACVFGSAG-NEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPR 76

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +    P  I T  
Sbjct: 77  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYNQLGNGTTNHGSVPCHIST-N 134

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
                V+ V+ G  H + L S G V+ WG    G +G G   ++ +P  ++
Sbjct: 135 LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVT 185


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 17/228 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  ENHAA V + G+VF+ G+ SS   GH+  N  +  P+LVEAL  V  K V  G
Sbjct: 264 VQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-INDSVSCPKLVEALASVHVKAVAFG 322

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +       H  G L +    ++ +P K   P++ + SV +IA G  + 
Sbjct: 323 SKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSI-SVSKIACGEWHT 381

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G ++++G G+   LGHG++    +P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESL--KGLRVKSVACGPWHTAAVVEV 439

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                    SG ++TWG    G LGH D+  K +P  +  L S+  +Q
Sbjct: 440 TSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQ 487



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +S G+   G+L +  E  Q           +  V +++  E H A +  SGQ+FT GD +
Sbjct: 338 WSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGT 397

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL----------TIRGHVHTCG 241
               GH D  + I RP+ VE+LKG+  K V  G   T  +             G + T G
Sbjct: 398 FGVLGHGD-KQGIARPKEVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWG 456

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
               G+LGH D   +  P  +  L      +Q++ G +  + +T  GVV++ GS  +  L
Sbjct: 457 DADRGKLGHADKKIKLVPTCVDLLTSY-DFLQVSCGAALTVVLTSTGVVFTIGSSKHGQL 515

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G+     E       T + +   V  +S+G  HV  L   G V+TWGKG  G LG GD  
Sbjct: 516 GNPHADGESICTVEGTLKNE--FVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYD 573

Query: 362 DKTLPEPLSSLK 373
           +++ P  + +L+
Sbjct: 574 NRSSPTLVEALQ 585



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV +   +  + +  G N    +T  G V + G+ +   LGH        PK +
Sbjct: 249 PKALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLV 308

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRR 320
             L  V  V  +A G  +  AVT +G +  +  G++    L +  + ++  P  +     
Sbjct: 309 EALASV-HVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKL-FGPM 366

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
             I V +++ G+ H   + SSG ++T+G G  G LGHGD+     P+ + SLK      G
Sbjct: 367 DSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLK------G 420

Query: 381 LSVLAEVC 388
           L V +  C
Sbjct: 421 LRVKSVAC 428



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 11/126 (8%)

Query: 109 TSAGNMQITTGRYHTLLISNSSV-FSCGSSLCGVLG--HGPETTQC-VSFTRINFPSAAH 164
           TS   +Q++ G   T++++++ V F+ GSS  G LG  H    + C V  T  N      
Sbjct: 481 TSYDFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKN----EF 536

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTA 223
           V ++S+  +H A +   GQVFT G  +    G  D  NR    P LVEAL+G   + +  
Sbjct: 537 VREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRS--SPTLVEALQGRHVQSIAC 594

Query: 224 GLNFTG 229
           G NF+ 
Sbjct: 595 GSNFSA 600


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 122/266 (45%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+    +K  P+
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQ 280



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 342 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
           G  + WG    G L   G   ++    P  + +LK+
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKN 235



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 5/168 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
           +VS G  H +AL     V++WGK   G LG G E   +  P+ + SL+
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLE 179


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 121/230 (52%), Gaps = 21/230 (9%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQS--GQVFTCGDNSS------FCCGHRDTNR----- 202
           +IN     H++ +  ++N    + +S   ++ T  +NS+      F  G  D ++     
Sbjct: 516 KINPDFQKHILSMFYTQNRKLSISESKDDELCTLWENSTNKQVDVFMWGLNDKDQLGGLK 575

Query: 203 --PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTP 259
              +  P L + L  + CK +  G   T F+T +G +++CG ++ G+LG GD T +  +P
Sbjct: 576 GSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSP 635

Query: 260 KSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           + +  L + + + V + +G ++++A+T +G+ +S+G G N  LGHG      +P  I+ F
Sbjct: 636 RLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAF 695

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              G  V  +S G  H  A+  + Y+YTWG G  G LGHGDE  +T+ +P
Sbjct: 696 V--GKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDE--ETILQP 741



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 14/275 (5%)

Query: 95   RFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS 153
            R L+S++H       +   + + +G  H L L S+  VFS G    G LGHG   T    
Sbjct: 1519 RLLESIKH------INIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQP 1572

Query: 154  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
              RI F     +  + A  +H+A +  +G+++T G       GH D++  + +P+ VEAL
Sbjct: 1573 -KRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQL-KPKQVEAL 1630

Query: 214  KGVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            +      V  G      L I    +V + G   +G+LG G +     P  I  L   G +
Sbjct: 1631 QFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKG-I 1689

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            V++  G  + +A+T  GV+Y++G G  + LGHG +    +P  +     K   V  +S G
Sbjct: 1690 VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNK--IVTSISCG 1747

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              H V     G VY WG    G LG G  I +  P
Sbjct: 1748 SLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTP 1782



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 15/280 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 172
           I  G   T  I+N   ++SCG S  G LG G  T    S   +   +   V +VS     
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +   G  F+ GD  +   GH +      +P L+EA  G     ++ G   +  + 
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNL-MSCSKPHLIEAFVGKIVTDISCGSAHSAAIV 714

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGV 289
              +++T G    G+LGHGD      PK +     +G +VVQ++ G   +  + +T +  
Sbjct: 715 ENKYLYTWGLGDFGRLGHGDEETILQPKFVTHF--LGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G G    LG G     L P  ++  R  G+ + ++  G +  VAL  +G V+TWGK
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLR--GLQICKILCGAQFTVALTKTGTVWTWGK 830

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSH----LAVQGLSVLA 385
           G    LGHG +I    P+ +  L+      +AV  L  LA
Sbjct: 831 GDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLA 870



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L S+   FS G    G LGHG     C     I       V  +S    H+A +
Sbjct: 655 GNHVMALTSDGLAFSWGDGENGQLGHG-NLMSCSKPHLIEAFVGKIVTDISCGSAHSAAI 713

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
           +++  ++T G       GH D    I +P+ V    G    QV+ G     T  +T    
Sbjct: 714 VENKYLYTWGLGDFGRLGHGD-EETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P  +  L  +  + +I  G  + +A+T  G V+++G G
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLRGL-QICKILCGAQFTVALTKTGTVWTWGKG 831

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             + LGHG      QP+ ++  R  G HV+ ++ G  H +A+   G V++WG    G LG
Sbjct: 832 DFYRLGHGTDIHVRQPKLVEGLR--GKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG 889

Query: 357 HGDEIDKTLPEPLSSLKSH 375
            G+   K +P  ++ L +H
Sbjct: 890 TGETDVKKVPNLITGLHNH 908



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 15/237 (6%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSGQVFT 186
            VF+ G    G LG G   ++ V+  R+   S  H+    + V +   H   +   G+VF+
Sbjct: 1496 VFATGYGNNGQLGLG--YSETVTSPRL-LESIKHINIKKISVHSGGRHCLALSSDGEVFS 1552

Query: 187  CGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
             G+      GH  R T+    +P+ +E   G     + AG + +  + + G ++T G   
Sbjct: 1553 WGEGEDGKLGHGNRQTSS---QPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGR 1609

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +G+LGHGD+ D+  PK +  L+    + V   +G +  L +T +  V+S+G G    LG 
Sbjct: 1610 YGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGR 1669

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            G       P  I+    KGI  V+V  G +  +AL   G +YTWGKG    LGHG E
Sbjct: 1670 GGSDGCKVPMIIEDLSGKGI--VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTE 1724



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 141/305 (46%), Gaps = 24/305 (7%)

Query: 73  GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSD-------IVETSAGNMQITTGRYHTL- 124
           G ++ ++I+LL R    ++ V   L++ + + D       +  T    + I+  +   L 
Sbjct: 488 GFTKTIEIKLLTRTLQLYQVVDLKLKADKINPDFQKHILSMFYTQNRKLSISESKDDELC 547

Query: 125 -LISNSS-----VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            L  NS+     VF  G +    LG G + ++  S T  +  S+     ++       F+
Sbjct: 548 TLWENSTNKQVDVFMWGLNDKDQLG-GLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFI 606

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
              G++++CG++S    G  D    +  PRLV  L  +   +V+  +G N    LT  G 
Sbjct: 607 TNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGL 666

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGS 295
             + G   +GQLGHG+ +    P  I     VG +V  I+ G ++  A+  N  +Y++G 
Sbjct: 667 AFSWGDGENGQLGHGNLMSCSKPHLIEAF--VGKIVTDISCGSAHSAAIVENKYLYTWGL 724

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCG 353
           G    LGHG++   LQP+ +  F   G +VV+VS G  D   V +     V++WG G  G
Sbjct: 725 GDFGRLGHGDEETILQPKFVTHFL--GYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFG 782

Query: 354 ALGHG 358
            LG G
Sbjct: 783 KLGRG 787



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 3/138 (2%)

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G   +GQLG G +    +P+ +  ++ +    + + +G  + LA++ +G V+S+G 
Sbjct: 1496 VFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGE 1555

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G +  LGHG +    QP+ I+ F  K I    + AG  H  A+  +G +YTWGKG  G L
Sbjct: 1556 GEDGKLGHGNRQTSSQPKRIEFFCGKII--TNICAGGSHSAAIGLNGELYTWGKGRYGRL 1613

Query: 356  GHGDEIDKTLPEPLSSLK 373
            GHGD  D+  P+ + +L+
Sbjct: 1614 GHGDSDDQLKPKQVEALQ 1631



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%)

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T   +V++ G G+N  LG G       PR +++ +   I  + V +G  H +AL S G V
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEV 1550

Query: 345  YTWGKGYCGALGHGDEIDKTLPE 367
            ++WG+G  G LGHG+    + P+
Sbjct: 1551 FSWGEGEDGKLGHGNRQTSSQPK 1573


>gi|449270678|gb|EMC81335.1| putative E3 ubiquitin-protein ligase HERC5, partial [Columba livia]
          Length = 314

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 4/195 (2%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V + G++FT G N+    G    N  I +P+LVE LKG+P  Q+ AG      +++ G V
Sbjct: 2   VCEGGELFTWGQNAHGQLGVSSQNALIPKPQLVERLKGIPLAQIAAGGAHNVAVSLSGAV 61

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           ++ G N  GQLG G T DR  P  I  LE   +V  ++ G  +   ++  G+V +FG+G 
Sbjct: 62  YSWGKNDFGQLGLGHTRDRGCPSYIKALEHWKTVF-VSCGADHTAVLSKEGLVCTFGAGG 120

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTWGKGYCGALG 356
           +  LGH    +EL PR +      G  V +++ G +H +V + S   V+++G    G LG
Sbjct: 121 SGQLGHNSTRNELVPRLVAELW--GARVSQIACGRQHTLVYVPSLDTVFSFGSDEEGQLG 178

Query: 357 HGDEIDKTLPEPLSS 371
              + ++ +P P+ S
Sbjct: 179 DKRKPNQLIPLPIDS 193



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 4/139 (2%)

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G + T G N HGQLG        P P+ +  L+ +  + QIAAG ++ +AV+ +G VYS+
Sbjct: 6   GELFTWGQNAHGQLGVSSQNALIPKPQLVERLKGI-PLAQIAAGGAHNVAVSLSGAVYSW 64

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G   D   P  I+         V VS G +H   L   G V T+G G  G
Sbjct: 65  GKNDFGQLGLGHTRDRGCPSYIKALEH--WKTVFVSCGADHTAVLSKEGLVCTFGAGGSG 122

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGH    ++ +P  ++ L
Sbjct: 123 QLGHNSTRNELVPRLVAEL 141



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +V   G ++++G  ++  LG   Q + L P+     R KGI + +++AG  H VA+  SG
Sbjct: 1   SVCEGGELFTWGQNAHGQLGVSSQ-NALIPKPQLVERLKGIPLAQIAAGGAHNVAVSLSG 59

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VY+WGK   G LG G   D+  P  + +L+
Sbjct: 60  AVYSWGKNDFGQLGLGHTRDRGCPSYIKALE 90



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSASE 172
           QI  G  H + +S S +V+S G +  G LG G    + C S+  I        V VS   
Sbjct: 44  QIAAGGAHNVAVSLSGAVYSWGKNDFGQLGLGHTRDRGCPSY--IKALEHWKTVFVSCGA 101

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           +H A + + G V T G   S   GH  T   +  PRLV  L G    Q+  G   T  ++
Sbjct: 102 DHTAVLSKEGLVCTFGAGGSGQLGHNSTRNELV-PRLVAELWGARVSQIACGRQHTLVYV 160

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
                V + GS+  GQLG     D+  P  + PL
Sbjct: 161 PSLDTVFSFGSDEEGQLG-----DKRKPNQLIPL 189


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  V+    HAA V +  +VFT G+  S   GH   TN  +F+PRLVE+L     + +  
Sbjct: 265 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTN--VFQPRLVESLSTCNVELIAC 322

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
           G   T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  +
Sbjct: 323 GEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSAVSCGTWH 381

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 338
              +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+  
Sbjct: 382 TALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVE 439

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G    LGHGD   K  P  + SL
Sbjct: 440 VIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSL 480



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 21/289 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 320 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLDGLPVSAVSCG 378

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  SGQ++T GD +    GH +     + P+ VE+LKG+    V+ G+  T  +
Sbjct: 379 TWHTALITSSGQLYTFGDGTFGVLGHGNRASCSY-PKEVESLKGLRTISVSCGVWHTAAV 437

Query: 232 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                       G + T G     +LGHGD   +  P  +  L +  +  + A G +  +
Sbjct: 438 VEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAACGHTLTI 496

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L ++G
Sbjct: 497 GLTTSGHIFTVGSPVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHVAVLTNAG 554

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC 388
            VYTWGKG  G LGHGD  D+ +P  + +LK     +   G S  A +C
Sbjct: 555 EVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAIC 603



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 7/187 (3%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 239 DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 295

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   +   P+ +  L    +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 296 GHGIGTNVFQPRLVESLSTC-NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 354

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 355 VSHWIPKRV-SGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 413

Query: 367 EPLSSLK 373
           + + SLK
Sbjct: 414 KEVESLK 420



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 14/144 (9%)

Query: 251 GDTLDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G T D   PK   PLE   +  V  +A G  +   VT    V+++G   +  LGHG   +
Sbjct: 246 GTTTDVLVPK---PLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTN 302

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLP 366
             QPR +++     + ++  + G+ H  A+ ++G +YTWG G    G LGHG  +   +P
Sbjct: 303 VFQPRLVESLSTCNVELI--ACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP 360

Query: 367 EPLSSLKSHLAVQGLSVLAEVCPT 390
           + +S       + GL V A  C T
Sbjct: 361 KRVSG-----PLDGLPVSAVSCGT 379


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 94/197 (47%), Gaps = 4/197 (2%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G+VFT G  SS   GH D    I  P+LV         Q  AG + +GF++ 
Sbjct: 59  HVIALTSGGKVFTWGRGSSGQLGHGDILN-ITLPKLVSFFDDSVITQAAAGWSHSGFVSD 117

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G + TCG+ + GQLGHGDTL   TP  ++      SV  +A G  + L +     V  F
Sbjct: 118 SGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNN-DSVKMVACGMRHSLVLFAGNQVCGF 176

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GSG    LG      +           K + VVR+SA  +H  A+ + G  ++WG+G+CG
Sbjct: 177 GSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG 236

Query: 354 ALGHGDEIDKTLPEPLS 370
             G      ++LP PLS
Sbjct: 237 --GPDVHAPQSLPSPLS 251



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 125/301 (41%), Gaps = 54/301 (17%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L S   VF+ G    G LGHG +         ++F   + + Q +A  +H+ FV
Sbjct: 57  GAHVIALTSGGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFV 115

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             SG +FTCG+ S    GH DT   +  P  V        K V  G+  +  L     V 
Sbjct: 116 SDSGCIFTCGNGSFGQLGHGDT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVC 174

Query: 239 TCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
             GS   GQLG      +    P  ++ L++V  VV+I+A   +  A++ +G  +S+G G
Sbjct: 175 GFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV-EVVRISANGDHSAAISADGQFFSWGRG 233

Query: 297 SNFCLG------------------------------HGE------------QHDELQPRA 314
             FC G                               GE            +  +LQ  +
Sbjct: 234 --FCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDS 291

Query: 315 IQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            +    K     G+ V++++AG EH  A+  +G V TWG G  G LG G+  D+T PE +
Sbjct: 292 SEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELV 351

Query: 370 S 370
           S
Sbjct: 352 S 352



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G+G++  LG  +  DEL P+ +       I ++  + G  HV+AL S G V+TWG+
Sbjct: 17  VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISML--ACGGAHVIALTSGGKVFTWGR 74

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LGHGD ++ TLP+ +S     +  Q
Sbjct: 75  GSSGQLGHGDILNITLPKLVSFFDDSVITQ 104


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
           V VS+   H   +   G V++ G+      GH   N+  + RP+L+E L GV    +  G
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACG 74

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYML 282
            + +  +T  G ++T G   +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L
Sbjct: 75  GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTL 133

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG
Sbjct: 134 CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSG 191

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            VYTWGKG    LGHG +     P  +++L+
Sbjct: 192 AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQ 222



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 20/269 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
            L+S++H           + +++G  H + +S+   V+S G    G LGHG +    VS+
Sbjct: 5   LLESIQH------VFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSY 54

Query: 155 TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
            R   I       +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 55  DRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 113

Query: 212 ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 114 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 173

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 174 -VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 230

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            G  H VA    G V+TWG    G LG G
Sbjct: 231 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 259



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 3/168 (1%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  V  +V IA G  +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 63  LLGV-EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI 121

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V   +GD   + +     V++WG G  G LG G      +P  + SL
Sbjct: 122 DVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL 169



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++  +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 127 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVVKVECGSQFSV 185

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 186 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 244

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 245 VFTWGDNDEGQLGDGTTSALHRPRLVHALQG-KKITRVACGSAHTLA 290


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   V  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V R + G  H + L   G VY WG    G LG G++ ++  P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 TPIIVEKDRI 310



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  V C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLTGKKVACLSYGSGPHVV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVDTGEVYVWGYS 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G LG G   ++  P  +++L      QG+ V    C
Sbjct: 233 GNGQLGLGGSGNQPTPCRVAAL------QGIRVQRAAC 264


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 123/278 (44%), Gaps = 26/278 (9%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS----AAHVVQV 168
           R+  L+     +F+ G    G LGHG       P   + ++FT ++F +       V  V
Sbjct: 270 RHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASV 329

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H A V  + Q+FT GD +    GH D +   + PR VE+L G+    V  G+  T
Sbjct: 330 TCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAY-PREVESLSGLRTIAVACGVWHT 388

Query: 229 GFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             +              G + T G     +LGHGD   R  P  +  L E  +  ++A G
Sbjct: 389 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEY-NFQKVACG 447

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S  + +T +G V + GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  
Sbjct: 448 HSLTVGLTTSGQVCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAV 505

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           L S   VYTWGKG  G LGHGD  D+  P  + +LK  
Sbjct: 506 LTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDR 543



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 23/261 (8%)

Query: 95  RFLQSVEHSS-DIVETSAGNMQI---TTGRYHTLLISNS-SVFSCGSSLCGVLGHG---- 145
           R ++S+  +S D V      +Q+   T G +HT L++ +  +F+ G    GVLGHG    
Sbjct: 304 RLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN 363

Query: 146 ---PETTQCVSFTRI-----NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
              P   + +S  R           A VV+V  +++ A+  + SG++FT GD      GH
Sbjct: 364 VAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS--VSSGKLFTWGDGDKNRLGH 421

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            D   P  +P  V AL     ++V  G + T  LT  G V T GS  +GQLG+  + D  
Sbjct: 422 GD-KEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQS-DGK 479

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
            P  +        V +IA G  ++  +T    VY++G G+N  LGHG+  D   P  ++T
Sbjct: 480 LPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVET 539

Query: 318 FRRKGIHVVRVSAGDEHVVAL 338
            + +  HV  ++ G  +  A+
Sbjct: 540 LKDR--HVKYIACGSNYTAAI 558



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 26/169 (15%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA------------PLEEV 268
           +  G+     +T +G + T G  + G+LGHG   D   P+ +             PLE +
Sbjct: 265 IACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGL 324

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             V  +  GP +   VT    +++FG G+   LGHG++ +   PR +++    G+  + V
Sbjct: 325 -QVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESL--SGLRTIAV 381

Query: 329 SAGDEHVVAL-----------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           + G  H  A+            SSG ++TWG G    LGHGD+  +  P
Sbjct: 382 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP 430



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 262 IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + PLE   V  V  IA G  +   VT  G ++++G  S   LGHG   D +QPR +++  
Sbjct: 251 VKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLA 310

Query: 320 ----------RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--- 366
                      +G+ V  V+ G  H   + ++  ++T+G G  G LGHGD+ +   P   
Sbjct: 311 FTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREV 370

Query: 367 EPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
           E LS L++     G+   A V   IV + + S S
Sbjct: 371 ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVS 404


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 18/226 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G +++ G  TH  G LGHG+ +    PK ++   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                     S+G ++TWG G    LGHGD+  +  P  +++L  H
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 131/303 (43%), Gaps = 23/303 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +  ++S G      G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVL 368

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRS 398
                V+TWGKG  G LGHGD  D+ +P  +  LK   AV+ ++  A     I Q    S
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDR-AVRYIACGANFTAAICQYKWVS 427

Query: 399 CSD 401
            +D
Sbjct: 428 GAD 430



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 10/204 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +   G V T G ++ G+LGHG   D   P+ + 
Sbjct: 65  ILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVE 124

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +YS+G G++    LGHG       P+ + +   +
Sbjct: 125 SL-TVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRV-SGALE 182

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV 378
           G+ V  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+    
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 379 QGLSVLAEVCPTIVQEDTRSCSDI 402
            G+   A +   IV   TRS S +
Sbjct: 243 CGVWHTAAIVEVIV---TRSSSSV 263


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 9/249 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSAS 171
           + +  G+ HTL+ +  + +F+ G +  G LG G    + V      +     +++ +SA 
Sbjct: 91  IHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAG 150

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+AF+ + G V+  GDNS   CG ++ N  +  PR +E     P   ++ G   T F+
Sbjct: 151 CHHSAFLTEEGSVYIWGDNSDGQCGIKNENY-LLNPRKIEFQN--PINSISCGYYHTAFI 207

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V+T G + +G+LG  D L    P+ +  L+E  + + +  G S+ + +T +G  Y
Sbjct: 208 SL-GKVYTFGEDDNGKLGRSDKLPNDVPEGV-ELDE--NCISVKCGGSHTIILTESGKAY 263

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +FGS  +  LG G    E        F  + ++++ V+ G+ H   L   G +YT G G 
Sbjct: 264 AFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGR 323

Query: 352 CGALGHGDE 360
            G L + DE
Sbjct: 324 NGKLCNEDE 332



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 7/216 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S  + H A V +SG+VF  G N     G   T + + +P  +++LK      V  G
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHT-KIVNKPSCLKSLKPFQSIHVACG 96

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
            + T   T    +   G N+ GQLG GD  DR  P+ I+  LE+  +++ ++AG  +   
Sbjct: 97  KSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAF 156

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G VY +G  S+   G   ++  L PR I+ F+     +  +S G  H  A  S G 
Sbjct: 157 LTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIE-FQNP---INSISCGYYH-TAFISLGK 211

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           VYT+G+   G LG  D++   +PE +   ++ ++V+
Sbjct: 212 VYTFGEDDNGKLGRSDKLPNDVPEGVELDENCISVK 247



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 13/164 (7%)

Query: 206 RPRLVEAL------KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRP 257
           + R  E L      +  P K+++ G   T  +   G V   G N  GQLG G T  +++P
Sbjct: 20  KSRFAEDLSSHFFVRNDPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKP 79

Query: 258 T-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +  KS+ P + +     +A G S+ L  T    +++FG  S+  LG G+  D   P+ I 
Sbjct: 80  SCLKSLKPFQSI----HVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMIS 135

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           T   K  +++ +SAG  H   L   G VY WG    G  G  +E
Sbjct: 136 TDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNSDGQCGIKNE 179



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 6/122 (4%)

Query: 107 VETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AH 164
           VE     + +  G  HT++++ S   ++ GS+  G LG G   T+     R+NF     +
Sbjct: 237 VELDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVN 296

Query: 165 VVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           ++ V+  E+H+AF+   G+++TCGD  N   C  + D +  I  P  +E  K   C  V+
Sbjct: 297 LIYVTCGESHSAFLTDEGKLYTCGDGRNGKLC--NEDESTNICTPTTIEMFKSFFCTYVS 354

Query: 223 AG 224
            G
Sbjct: 355 CG 356


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF  G +  G LG G    + +  +++ F    +V Q++A   H A + ++G V T G N
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIP-SQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFN 99

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 248
            S   GH + N+ I  P+ +E+LK +    +++  G      ++  G ++TCG N +GQL
Sbjct: 100 GSGQLGHGN-NKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN--------GVVYSFGSGSNFC 300
           GHG   +  TP  +  L++   V  ++    + L VT +          VYS G   N  
Sbjct: 159 GHGTQSNLSTPTLVQALKDT-QVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ 217

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG      E+ P+ I++   +   V++ + G  H V +   G V++ G    G LGH D 
Sbjct: 218 LGQEHTCHEITPKIIRSLNTR--QVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDT 275

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
             +  P  + SLK+   VQ
Sbjct: 276 KSRNQPVLIESLKNKFIVQ 294



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 143/359 (39%), Gaps = 89/359 (24%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           ++  +  +++CG +  G LGHG ++      T +       V  VS S  H+  V Q  +
Sbjct: 140 IISQDGKLYTCGYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMR 198

Query: 184 --------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
                   V++ G N +   G   T   I  P+++ +L      Q   GL+ + F+T+ G
Sbjct: 199 QASNQQTTVYSVGRNDNGQLGQEHTCHEI-TPKIIRSLNTRQVIQTACGLHHSVFVTVHG 257

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V +CG N +GQLGH DT  R  P  I  L+    +VQ A G  + L     G +Y+FG 
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSRNQPVLIESLKN-KFIVQAACGYYHTLVRRDTGEIYAFGR 316

Query: 296 GSNFCLG----------------------------------HGEQHDE------------ 309
                LG                                   G++H++            
Sbjct: 317 NDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAI 376

Query: 310 ------------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
                        QP+    +  K +++ +++ G  H +AL  SG ++T+G+G  G LG 
Sbjct: 377 MQGLAESNNLNNQQPQV--QYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQ 434

Query: 358 GDEIDKTLPEPLSSLK------------------SHLAVQGLSVLAEVCPTIVQEDTRS 398
           G+  D+ LP+ ++SL                       V+G+S L+     I+ E +R+
Sbjct: 435 GNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKVKGISQLSTDMKKIINEPSRA 493



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 70/284 (24%)

Query: 121 YHTLLISN---------SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           YH+L+++          ++V+S G +  G LG    T   ++   I   +   V+Q +  
Sbjct: 188 YHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQ-EHTCHEITPKIIRSLNTRQVIQTACG 246

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+ FV   G+VF+CG N +   GH DT +   +P L+E+LK     Q   G   T   
Sbjct: 247 LHHSVFVTVHGEVFSCGFNDNGQLGHNDT-KSRNQPVLIESLKNKFIVQAACGYYHTLVR 305

Query: 232 TIRGHVHTCGSNTHGQLG---HGDTLDRP----------------------------TPK 260
              G ++  G N  GQLG   +G  L +P                               
Sbjct: 306 RDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQP 365

Query: 261 SIAPLEEVGSVVQ--------------------------IAAGPSYMLAVTGNGVVYSFG 294
           S   L E G+++Q                          IA G  + +A+  +G +++FG
Sbjct: 366 SSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFG 425

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            G++  LG G   D+  P+ + +   K   V+ ++ G  H + L
Sbjct: 426 RGNHGQLGQGNTEDQKLPKQVASLHDK--KVIGIAGGFYHTIVL 467



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           TG  +V+ FG  S   LG G+  +   P  ++ F    ++V +++AG+EH+  L  +G V
Sbjct: 36  TGAPLVFVFGQNSYGELGLGDVQERSIPSQVRFFDE--MNVTQIAAGNEHIAVLTRNGDV 93

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            T G    G LGHG+    + P+ + SLK+
Sbjct: 94  LTVGFNGSGQLGHGNNKSISTPKKIESLKN 123



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSAS 171
           +Q   G YHTL+  ++  +++ G +  G LG        +   +I  F + +++     +
Sbjct: 293 VQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGN 352

Query: 172 ENHAAFVLQSGQVF------TCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAG 224
           +N     L SGQ        + G++ +   G  ++N    +   V+ L K V   ++  G
Sbjct: 353 QNQ----LHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACG 408

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              +  L   G + T G   HGQLG G+T D+  PK +A L +   V+ IA G
Sbjct: 409 CYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHD-KKVIGIAGG 460


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L++ S+ +V+S G ++ G LG G    +  S  ++++ S      VS
Sbjct: 334 SGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRS-SAVKVSWLSLGRA-DVS 391

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-QVTAGLNFT 228
           + + H+  +  +G V+  GDN S   G+           LV A  G+     V+AG   T
Sbjct: 392 SGQLHSVVLDSNGAVWAWGDNYSGQLGN-----GTGLDSLVAAPVGLGGSVAVSAGFKHT 446

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L     V   G N HGQLG G   DR  P  +A L  V +V   +AG  + LA+  NG
Sbjct: 447 LVLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLSGVSAV---SAGSYHSLALRSNG 503

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      LG G   D LQP  +Q     G  VV V+AGD H +AL S G V+ WG
Sbjct: 504 TVWAWGFNRYGQLGDGTNTDRLQP--VQVAGLSG--VVAVAAGDSHSLALRSDGTVWAWG 559

Query: 349 KGYCGALGHGDEIDKTLP 366
             + G +G G    + LP
Sbjct: 560 YNFDGQIGDGSYSWRFLP 577



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G YH+L L SN +V++ G +  G LG G  T +      +     + VV V+A ++H
Sbjct: 489 VSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDR---LQPVQVAGLSGVVAVAAGDSH 545

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+  G N     G    +   +R   V+ +       V+AG   +  L   
Sbjct: 546 SLALRSDGTVWAWGYNFDGQIGDGSYS---WRFLPVQVVGLSGVVSVSAGGYHSLALRSD 602

Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G V T G N  GQLG G T +++P P  +A L     VV + +G  + L +  +G V+++
Sbjct: 603 GTVWTWGYNGSGQLGDGSTAINKPAPVQVAGLS---GVVSLGSGNYHSLGLRSDGTVWAW 659

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G   +  LG G   +   P      R  G+  VV V AGD H +A  S G V+ WG    
Sbjct: 660 GFNFDGQLGDGSLLNRSTP-----VRVSGLSGVVSVVAGDYHSLARRSDGTVWAWGYNGE 714

Query: 353 GALGHGDEIDKTLP 366
           G LG G   D  +P
Sbjct: 715 GQLGDGTRNDTLVP 728



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 25/271 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSAS 171
           + +  G YH+L + S+ +V++ G +    LG G  T+     +R+   S  +  V + A 
Sbjct: 288 LTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS-----SRVPVQSGLSGGVTLVAG 342

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK----GVPCKQVTAGLNF 227
             H+  +   G V++ GDN     G        F PR   A+K     +    V++G   
Sbjct: 343 YKHSLVLRSDGTVWSWGDNVFGQLGD-----GTFNPR-SSAVKVSWLSLGRADVSSGQLH 396

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G V   G N  GQLG+G  LD      +A    +G  V ++AG  + L +  +
Sbjct: 397 SVVLDSNGAVWAWGDNYSGQLGNGTGLD----SLVAAPVGLGGSVAVSAGFKHTLVLKAD 452

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             V+++G   +  LG G   D  +P  +Q     G+  V  SAG  H +AL S+G V+ W
Sbjct: 453 TTVWAWGVNEHGQLGDGTLTDRTRP--VQVAGLSGVSAV--SAGSYHSLALRSNGTVWAW 508

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G    G LG G   D+  P  ++ L   +AV
Sbjct: 509 GFNRYGQLGDGTNTDRLQPVQVAGLSGVVAV 539



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 130/318 (40%), Gaps = 60/318 (18%)

Query: 110 SAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S G   +++G+ H++++ SN +V++ G +  G LG+G      V+   +    +   V V
Sbjct: 384 SLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVA-APVGLGGS---VAV 439

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           SA   H   +     V+  G N     G    T+R   RP  V  L GV    V+AG   
Sbjct: 440 SAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRT--RPVQVAGLSGVSA--VSAGSYH 495

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G V   G N +GQLG G   DR  P  +A L     VV +AAG S+ LA+  +
Sbjct: 496 SLALRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLS---GVVAVAAGDSHSLALRSD 552

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQP----------------------RAIQTFRRKGIH- 324
           G V+++G   +  +G G       P                      R+  T    G + 
Sbjct: 553 GTVWAWGYNFDGQIGDGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNG 612

Query: 325 ------------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
                                   VV + +G+ H + L S G V+ WG  + G LG G  
Sbjct: 613 SGQLGDGSTAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSL 672

Query: 361 IDKTLPEPLSSLKSHLAV 378
           ++++ P  +S L   ++V
Sbjct: 673 LNRSTPVRVSGLSGVVSV 690



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 116/264 (43%), Gaps = 23/264 (8%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G Y++L L S+ +V++ G +  G LG G  T + V    +N    + V+ +S
Sbjct: 186 SGVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNL---SGVMNLS 242

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   +   G V+  G N+    G   T    F+P  V    G+         N+  
Sbjct: 243 AGSFHTVALRSDGSVWAWGFNAYGQLGD-GTTTSRFQPVQV----GLSDVLTLVAGNYH- 296

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +R  G V   G N + QLG G T     P        +   V + AG  + L +  +
Sbjct: 297 SLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ----SGLSGGVTLVAGYKHSLVLRSD 352

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSSGYVY 345
           G V+S+G      LG G       PR+    +   + + R  VS+G  H V LDS+G V+
Sbjct: 353 GTVWSWGDNVFGQLGDGT----FNPRS-SAVKVSWLSLGRADVSSGQLHSVVLDSNGAVW 407

Query: 346 TWGKGYCGALGHGDEIDKTLPEPL 369
            WG  Y G LG+G  +D  +  P+
Sbjct: 408 AWGDNYSGQLGNGTGLDSLVAAPV 431



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N  GQLG G  +D PTP  +  L     VV +A+G  + L ++ +G V+++G
Sbjct: 55  GTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS---GVVSVASGDYHSLGLSSDGTVWAWG 111

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             +   LG+G       P  +Q        VV + +G  H +AL S G V+ WG      
Sbjct: 112 DNTAGQLGNGTASASPVPVRVQNLS----GVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAV 378
           LG+       LP  +  L   +AV
Sbjct: 168 LGNVGATRSNLPVQVPGLSGVIAV 191



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 100/237 (42%), Gaps = 17/237 (7%)

Query: 134 CGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAAFVLQSGQVFTCGDNS 191
            G+ L    G GP   +  +  R+  P        +++  + H+  V   G V+  G N 
Sbjct: 6   LGAWLVAGCGPGPGVEEP-ALGRVRSPLGGRSSAARLALGQYHSVGVHSDGTVWAWGFNR 64

Query: 192 SFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
               G     + P   P  V  L GV    V +G   +  L+  G V   G NT GQLG+
Sbjct: 65  QGQLGDGTLVDSPT--PVRVTNLSGVVS--VASGDYHSLGLSSDGTVWAWGDNTAGQLGN 120

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE 309
           G     P P  +   + +  VV + +G S+ LA+  +G V+++G      LG+ G     
Sbjct: 121 GTASASPVPVRV---QNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSN 177

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           L    +Q     G  V+ V AG  + +AL S G V+ WG    G LG G    + +P
Sbjct: 178 LP---VQVPGLSG--VIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVP 229



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 249 GHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           G G  ++ P    + +PL    S  ++A G  + + V  +G V+++G      LG G   
Sbjct: 15  GPGPGVEEPALGRVRSPLGGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLV 74

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   P  +         VV V++GD H + L S G V+ WG    G LG+G      +P 
Sbjct: 75  DSPTPVRVTNLS----GVVSVASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASASPVPV 130

Query: 368 PLSSLK 373
            + +L 
Sbjct: 131 RVQNLS 136


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 116/251 (46%), Gaps = 20/251 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 409 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 467

Query: 225 -----------LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                      ++   F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 468 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 526

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 527 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 584

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC-- 388
           HV +L S+G VYTWGKG  G LG GD  D+ LP   E L   +      G +  A +C  
Sbjct: 585 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAICLH 644

Query: 389 PTIVQEDTRSC 399
            +I   D  SC
Sbjct: 645 RSITSSDQSSC 655



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 360

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 361 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 419

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 420 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESL--NGLCVKSVACGSWHTAAIVDI 477

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    + G ++TWG G  G LGHGD   K LP  ++ L
Sbjct: 478 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 519



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 12/185 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 350

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 351 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 407

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       GL V
Sbjct: 408 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESL------NGLCV 461

Query: 384 LAEVC 388
            +  C
Sbjct: 462 KSVAC 466


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 18/207 (8%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       +  G   T  +T+
Sbjct: 291 HAAMVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G   H  G LGHG  +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG + +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGNRENIAYPKEVESL--AGLRTIAVACGVWHTAAVVEVIVTQSSSSV 466

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG ++TWG G    LGHGD+  +  P
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKP 493



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 126/273 (46%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +  +++ G  +   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 IACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIP-KRISGPLEGLQVASVTCG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGNREN-IAYPKEVESLAGLRTIAVACGVWHTAAV 454

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDF-NFHKIACGHSL 513

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+    D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALK 604



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+ S   +F+ G    GVLGHG    + +++ + +   +    + V+    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHG--NRENIAYPKEVESLAGLRTIAVACGVW 449

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDFNFHKIA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV T GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVEDKLSGESVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + K  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDK--HVKYIACGANYSAAI 621



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 10/191 (5%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  PR +E+   +    +  G      +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L  + +V  IA G  +  AVT  G +Y++G G ++   LGHG       P+ I +
Sbjct: 324 RLVESL-AMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHG+  +   P+ + SL     
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESL----- 436

Query: 378 VQGLSVLAEVC 388
             GL  +A  C
Sbjct: 437 -AGLRTIAVAC 446


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 8/209 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           ++Q++  + H+  + + G++F  G N       G   T+ P   P+LVE L GVP  Q++
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPT--PQLVEHLSGVPLVQIS 436

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   +  L++ G++++ G N  GQLG G T     P  I  L+    V  +A G S+  
Sbjct: 437 AGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDN-QKVEFLACGGSHTA 495

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS- 341
            +T +G+V++FG+G    LGH    +EL+PR +      G  V +V+ G  H +A  S  
Sbjct: 496 LLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTEL--AGNRVTQVACGRWHTLAYVSDL 553

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           G V+++G G  G LG+G   ++ +P P+ 
Sbjct: 554 GKVFSFGSGKEGQLGNGGTHNQLIPLPMK 582



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 5/221 (2%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G   T   +   
Sbjct: 364 SIEHARFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQL 423

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   +VQ+SA + H+  +  SG +++ G N     G   TN   F P L+EAL   
Sbjct: 424 VEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF-PSLIEALDNQ 482

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + +  G + T  LT  G V T G+  +GQLGH  T +   P+ +  L     V Q+A 
Sbjct: 483 KVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAG-NRVTQVAC 541

Query: 277 GPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 542 GRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 582



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 4/161 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N HGQLG G      PTP+ +  L  V  +VQI+AG 
Sbjct: 381 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGV-PLVQISAGK 439

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +A++ +G +YS+G      LG G  + E  P  I+    + +  +  + G  H   L
Sbjct: 440 AHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFL--ACGGSHTALL 497

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              G V+T+G G  G LGH    ++  P  ++ L  +   Q
Sbjct: 498 TKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQ 538



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 328
           S++QI  G  + LA++  G ++++G   +  LG G     +  P+ ++     G+ +V++
Sbjct: 378 SIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHL--SGVPLVQI 435

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           SAG  H +AL  SG +Y+WG+   G LG G    +  P  + +L + 
Sbjct: 436 SAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQ 482


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 122/266 (45%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+    +K  P+
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQ 280



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 342 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
           G  + WG    G L   G   ++    P  + +LK+
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKN 235



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 5/162 (3%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           +VS G  H +AL     V++WGK   G LG G E   + P P
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF-PSQPSP 172


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 28/293 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
           S   V+TWGKG  G LGHGD  D+ +P  + +L+     H+A  G +  A +C
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIAC-GANFTAAIC 418



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASL 296



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 7/199 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGL 381
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+     G+
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 382 SVLAEVCPTIVQEDTRSCS 400
              A +   IV + + + S
Sbjct: 246 WHTAAIVEVIVTQSSATVS 264



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P  +S       ++GL +    C T
Sbjct: 172 WIPRRISG-----PLEGLQIAYVSCGT 193


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 28/293 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
           S   V+TWGKG  G LGHGD  D+ +P  + +L+     H+A  G +  A +C
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIAC-GANFTAAIC 418



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASL 296



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 7/199 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGL 381
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+     G+
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 382 SVLAEVCPTIVQEDTRSCS 400
              A +   IV + + + S
Sbjct: 246 WHTAAIVEVIVTQSSATVS 264



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P  +S       ++GL +    C T
Sbjct: 172 WIPRRISG-----PLEGLQIAYVSCGT 193


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 143/305 (46%), Gaps = 30/305 (9%)

Query: 106 IVET-SAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           +VE+ +A N+  +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P
Sbjct: 122 LVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGP 180

Query: 161 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
                +  VS    H A +   GQ+FT GD S    GH +  + I  PR VE+L G+   
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTI 239

Query: 220 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            V  G+  T  +              G + T G     +LGHGD   R  P  +A L + 
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVR 327
               ++A G S  + +T +G V++ G   N   G  G  + + +P  ++  +    HV++
Sbjct: 300 -DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNPNSDGRPCLVED-KIASEHVLQ 354

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSV 383
           ++ G  HV  L S   V+TWGKG  G LGHGD  D+ +P  + +L+     H+A  G + 
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIAC-GANF 413

Query: 384 LAEVC 388
            A +C
Sbjct: 414 TAAIC 418



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAASNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASL 296



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 7/199 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESL- 126

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 127 AASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGL 381
           +  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+     G+
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 382 SVLAEVCPTIVQEDTRSCS 400
              A +   IV + + + S
Sbjct: 246 WHTAAIVEVIVTQSSATVS 264



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++     I    V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESLAASNIDF--VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P  +S       ++GL +    C T
Sbjct: 172 WIPRRISG-----PLEGLQIAYVSCGT 193


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 116/251 (46%), Gaps = 20/251 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 429 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 487

Query: 225 -----------LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                      ++   F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 488 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 546

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 547 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 604

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC-- 388
           HV +L S+G VYTWGKG  G LG GD  D+ LP   E L   +      G +  A +C  
Sbjct: 605 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAICLH 664

Query: 389 PTIVQEDTRSC 399
            +I   D  SC
Sbjct: 665 RSITSSDQSSC 675



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 18/222 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 380

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 381 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 439

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 440 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESL--NGLCVKSVACGSWHTAAIVDI 497

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    + G ++TWG G  G LGHGD   K LP  ++ L
Sbjct: 498 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 539



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 12/185 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 370

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 371 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 427

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       GL V
Sbjct: 428 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESL------NGLCV 481

Query: 384 LAEVC 388
            +  C
Sbjct: 482 KSVAC 486


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 122/272 (44%), Gaps = 24/272 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGS------SLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           I  G+  T +I     ++SCGS       +   LGH        S   +    +   +QV
Sbjct: 37  IALGQRGTFVIDGEGRLWSCGSHTRPQNDVKSFLGHAES-----SLALVEGLESERFIQV 91

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           SA+ +  A  LQ G+V++ G NS    G    N    RP  + AL+G    QV AG + +
Sbjct: 92  SATSHVLAVTLQ-GEVYSWGSNSYKQLGRDGVNN---RPMKITALEGEEVVQVCAGGHHS 147

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTG 286
             ++  G+++T G   +G+LGHG + D   P  +A   E   VV +A   G ++ + VT 
Sbjct: 148 AAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTE 207

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G +YSFG G    LGHG      QP  I         +V+V  G     A+  SG +Y 
Sbjct: 208 DGHIYSFGDGDFGKLGHGTNDRRRQPERID------FDIVKVVCGSSTSAAISLSGALYV 261

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           WG G    LG G E     P    +L +H  V
Sbjct: 262 WGGGRRYRLGTGTEAVIWQPRTAHALNTHKVV 293



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 20/283 (7%)

Query: 93  VLRFLQSVEHSSDIVE--TSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 150
           V  FL   E S  +VE   S   +Q++   +   +     V+S GS+    LG      +
Sbjct: 66  VKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVNNR 125

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRP 207
            +  T +       VVQV A  +H+A V ++G ++T G       GH    D N P    
Sbjct: 126 PMKITALE---GEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPT--- 179

Query: 208 RLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           R+    +G+    V  GL    +  +T  GH+++ G    G+LGHG    R  P+ I   
Sbjct: 180 RVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRRQPERID-- 237

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
                +V++  G S   A++ +G +Y +G G  + LG G +    QPR           V
Sbjct: 238 ---FDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTH--KV 292

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           V  +   EH VA+   G V+ WG    G LG     +KT+  P
Sbjct: 293 VDCALSSEHGVAVTDRGEVFVWGANDHGQLGADAGSEKTIIAP 335



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VF+ G+      G+   N+P+  P++   L  +    +  G   T  +   G + +CGS+
Sbjct: 1   VFSWGNTRDAELGYV-ANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSH 59

Query: 244 THGQ------LGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           T  Q      LGH ++       S+A +E  E    +Q++A  S++LAVT  G VYS+GS
Sbjct: 60  TRPQNDVKSFLGHAES-------SLALVEGLESERFIQVSA-TSHVLAVTLQGEVYSWGS 111

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            S   LG     D +  R ++    +G  VV+V AG  H  A+  +G +YTWG+G  G L
Sbjct: 112 NSYKQLGR----DGVNNRPMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRL 167

Query: 356 GHGDEIDKTLPEPLSSLKSHLAV 378
           GHG   D  +P  +++    + V
Sbjct: 168 GHGTSDDVNVPTRVAAFPEGIRV 190


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 125/285 (43%), Gaps = 36/285 (12%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 267 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 326

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 327 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 385

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 386 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 444

Query: 290 VYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V++ GS  +  LG+    D    L    ++T       V  +S+G  H+  L  +G V+T
Sbjct: 445 VFTIGSKEHGRLGNPLSEDTSICLIEGPLKTE-----FVREISSGSSHIAVLTMNGKVFT 499

Query: 347 WGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC 388
           WGKG  G LG GD +D++ P   E L   + H    G +    +C
Sbjct: 500 WGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAIC 544



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 229

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 230 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 288

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 289 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 347

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 348 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 357 HGDEIDKTLP---EPLSSL 372
           H D+  K +P   EPL+  
Sbjct: 406 HADKKMKLVPTCVEPLNDF 424



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 6/211 (2%)

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 224
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 152 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 211

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 212 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 270

Query: 285 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 271 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 329

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            ++ +G G  G LGHGD +    P+ + SLK
Sbjct: 330 QLFAYGDGTFGVLGHGDTLTVARPKQVESLK 360


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 116/235 (49%), Gaps = 15/235 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++ +V++ G +  G LG+G  TT   + T++  P    VV ++A   HA  V   G +
Sbjct: 464 LKADGTVWAWGDNANGQLGNG-STTDRSNPTQV--PGLTGVVSIAAGPGHALAVKADGTL 520

Query: 185 FTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +T GDN++   G   T +RPI  P  V  + GV    V AGL  +  + + G V   GSN
Sbjct: 521 WTWGDNNTGQLGDGTTVDRPI--PTQVPGVTGVVS--VAAGLYHSLVVKVDGTVWAWGSN 576

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G T  RP P     L     VV I AG  + LA+  +G V+++G   +  LG+
Sbjct: 577 YEGQLGGGTTTIRPVPSQTPNLT---GVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGN 633

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           G    +  P  +  F       V + AG  H +A+ + G V+TWG  Y G LG G
Sbjct: 634 GNTTTQQVPTQVPGFSGG----VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDG 684



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 124/279 (44%), Gaps = 26/279 (9%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           S +V  +AG     +G++   +++N  V++ G ++ G LG G  +   V       P  +
Sbjct: 348 SGVVAVAAG-----SGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAV-------PKRS 395

Query: 164 HVV----QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           H +     V+A   H       G V+  GDN+    G   T + +  P  V  L  +   
Sbjct: 396 HALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLL-PTQVPGLTNMVA- 453

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            V AG + +  L   G V   G N +GQLG+G T DR  P  +  L     VV IAAGP 
Sbjct: 454 -VAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPGLT---GVVSIAAGPG 509

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV  +G ++++G  +   LG G   D   P  +         VV V+AG  H + + 
Sbjct: 510 HALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGV----TGVVSVAAGLYHSLVVK 565

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G V+ WG  Y G LG G    + +P    +L   +A+
Sbjct: 566 VDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLTGVVAI 604



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 17/248 (6%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SENHAAFVL 179
           H+L++ S+ +V++ GS+  G LG G +  + V    +     + VV V+A S  H+  V+
Sbjct: 309 HSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGL---SGVVAVAAGSGQHSVAVM 365

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVH 238
            +G+V+T G N     G   ++     P+   AL  V    V AG  + G  +   G V 
Sbjct: 366 ANGEVWTWGHNVEGQLGEGSSSYSAV-PKRSHAL--VERTSVAAG-RYHGLASKPDGTVW 421

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G N  GQLG G T  R  P  +  L  +   V +AAG    LA+  +G V+++G  +N
Sbjct: 422 AWGDNAKGQLGDGTTAQRLLPTQVPGLTNM---VAVAAGHHSSLALKADGTVWAWGDNAN 478

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG+G   D   P  +         VV ++AG  H +A+ + G ++TWG    G LG G
Sbjct: 479 GQLGNGSTTDRSNPTQVPGL----TGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDG 534

Query: 359 DEIDKTLP 366
             +D+ +P
Sbjct: 535 TTVDRPIP 542



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 18/273 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  H+L L ++ +V++ GS+  G LG G  T + +       P+   +  ++A  
Sbjct: 151 VRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPT---IKAIAAGN 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G+V+  G NS+   G       +  P LV  L       ++AG N +    
Sbjct: 208 AHSLALDGTGRVWAWGSNSNGQLGDTTAGYRML-PALVPGL--TNATGLSAGSNHSLVRQ 264

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G     G+NT+GQLG G T  R  P+ ++ L  V  V+       + L +  +G V++
Sbjct: 265 ADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAGVDGVL---GAELHSLVLKSDGTVWT 321

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS     LG G Q   L P  +Q     G+  V   +G +H VA+ ++G V+TWG    
Sbjct: 322 WGSNQRGQLGDGTQEQRLVP--VQVMGLSGVVAVAAGSG-QHSVAVMANGEVWTWGHNVE 378

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           G LG G      +P+     +SH  V+  SV A
Sbjct: 379 GQLGEGSSSYSAVPK-----RSHALVERTSVAA 406



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 115/261 (44%), Gaps = 17/261 (6%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            R+     S+ +V++ G +  G LG G   T   + +         V  ++A E H   V 
Sbjct: 758  RFTAARKSDGTVWAWGDNTYGQLGDG---TTLATRSPAQVSGLTDVEGLAAGEGHVVVVK 814

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
              G V+T G+N+    G   T R +  P  V  L GV    V AG   +  L   G V  
Sbjct: 815  MDGTVWTWGNNAKGQLGDGTTTRRLV-PTQVPGLTGVVA--VAAGYAHSLALKADGTVWG 871

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             G N +GQLG G T  R     +AP +  G   V+ +A+G  + LA   +G ++++G  +
Sbjct: 872  WGENIYGQLGDGTTTQR-----VAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNA 926

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            +  LG G     L P  + +       VV +SA  +H +AL   G V+ WG    G LG 
Sbjct: 927  HGQLGIGTTTTRLAPTLVPSLS----GVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGD 982

Query: 358  GDEIDKTLPEPLSSLKSHLAV 378
            G    + +P    SL S  AV
Sbjct: 983  GTTTTRHVPTQAPSLSSVKAV 1003



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + IT G YH+L L ++ +V++ G +L G LG+G  TTQ V       P  +  V + A
Sbjct: 600 GVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVP---TQVPGFSGGVSLGA 656

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+  +   G V+T G N     G   T       + V    GV    + AG   +  
Sbjct: 657 GIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQ-VAGFTGVSF--LAAGEFHSVA 713

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G     GSN  GQLG G       P     L  +     +AAG  +  A   +G V
Sbjct: 714 LRTDGTAWAWGSNDKGQLGDGSARWHYAPT----LSRLVGARGLAAGDRFTAARKSDGTV 769

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  +   LG G       P  +         V  ++AG+ HVV +   G V+TWG  
Sbjct: 770 WAWGDNTYGQLGDGTTLATRSPAQVSGL----TDVEGLAAGEGHVVVVKMDGTVWTWGNN 825

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LG G    + +P  +  L   +AV
Sbjct: 826 AKGQLGDGTTTRRLVPTQVPGLTGVVAV 853



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 16/261 (6%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H +++  + +V++ G++  G LG G  T + V       P    VV V+A   H
Sbjct: 803  LAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVP---TQVPGLTGVVAVAAGYAH 859

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL-TI 233
            +  +   G V+  G+N     G   T + +  P   + L  V      A   + G     
Sbjct: 860  SLALKADGTVWGWGENIYGQLGDGTTTQRV-APTQAQGLTVVLSM---ASGTYHGLARKA 915

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G +   G N HGQLG G T  R  P  +  L     VV ++A   + LA+  +G V+++
Sbjct: 916  DGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLS---GVVSLSATHQHSLALKPDGTVWAW 972

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G  SN  LG G       P    +       V  VSAG E+ +A+ + G V++WG    G
Sbjct: 973  GYNSNGQLGDGTTTTRHVPTQAPSLSS----VKAVSAGFEYSLAVKADGTVWSWGINDRG 1028

Query: 354  ALGHGDEIDKTLPEPLSSLKS 374
             LG G    +  P  ++ L S
Sbjct: 1029 QLGSGTATPRATPTQVAGLNS 1049



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 11/151 (7%)

Query: 231 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           L +R  G V   G N +GQLG+G   D+  P     L  + +V    AG  + LA+  +G
Sbjct: 61  LAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAV---GAGDLHSLAMKSDG 117

Query: 289 VVYSFGSGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            V+++G G+NF  LG G       P  +         VVRV+AG  H +AL + G V+ W
Sbjct: 118 TVWTWG-GNNFGQLGDGTTTGRQAPVQVPGLGE----VVRVAAGFSHSLALKTDGTVWAW 172

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G    G LG G    + +P  +  L +  A+
Sbjct: 173 GSNGAGRLGDGTTTQRLMPVQVQGLPTIKAI 203



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 16/206 (7%)

Query: 114  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + + +G YH L   ++ ++++ G +  G LG G  TT+         PS + VV +SA+ 
Sbjct: 901  LSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTL---VPSLSGVVSLSATH 957

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H+  +   G V+  G NS+   G   T     P   P L         K V+AG  ++ 
Sbjct: 958  QHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAPSLSS------VKAVSAGFEYSL 1011

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             +   G V + G N  GQLG G    R TP  +A L    SV  + A  ++ L V+ +G 
Sbjct: 1012 AVKADGTVWSWGINDRGQLGSGTATPRATPTQVAGLN---SVTLLLAARAHALVVSADGT 1068

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAI 315
            +  FG      LG G+    L P  +
Sbjct: 1069 MRGFGDNEAGQLGAGDTLIRLAPNQV 1094


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 125/285 (43%), Gaps = 36/285 (12%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 269 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 328

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 329 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 387

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 388 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 446

Query: 290 VYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V++ GS  +  LG+    D    L    ++T       V  +S+G  H+  L  +G V+T
Sbjct: 447 VFTIGSKEHGRLGNPLSEDTSICLIEGPLKTE-----FVREISSGSSHIAVLTMNGKVFT 501

Query: 347 WGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC 388
           WGKG  G LG GD +D++ P   E L   + H    G +    +C
Sbjct: 502 WGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAIC 546



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 232 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 290

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 291 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 350 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 407

Query: 357 HGDEIDKTLP---EPLSSL 372
           H D+  K +P   EPL+  
Sbjct: 408 HADKKMKLVPTCVEPLNDF 426



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 6/211 (2%)

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 224
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 154 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 213

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 214 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 272

Query: 285 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 273 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 331

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            ++ +G G  G LGHGD +    P+ + SLK
Sbjct: 332 QLFAYGDGTFGVLGHGDTLTVARPKQVESLK 362


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 130/288 (45%), Gaps = 33/288 (11%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQC 151
           Q V   SD+V  +AG        +H+L L ++ +V++ GS+  G LG G     P   Q 
Sbjct: 143 QKVPGLSDVVAVAAG-------EFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQV 195

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T         VV ++A  + +  V   G V+  G N S   G   T      P  V 
Sbjct: 196 VGLT--------GVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGD-GTYIQRLAPTQVS 246

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L+GV    VTAGL     L   G V   GSN+ GQ+G G   DRP+P  +  +    +V
Sbjct: 247 QLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAV 304

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSA 330
               AG   +L    +G V+++G  S   LG G   D   P      R +G+  V  ++A
Sbjct: 305 AAQDAGSLVLLD---DGGVFAWGLNSQGQLGIGTTADSPLP-----VRVRGLGAVTSLAA 356

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G +H V L + G ++TWG G  G LGHG       PE ++ L +  +V
Sbjct: 357 GTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSNVASV 404



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 16/266 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +++ GR H+LL+ ++ +V + G +  G LG G  T +       N P A      SA   
Sbjct: 753  RLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCAR---AASAGRQ 809

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  +   G V++ G NS    G        + P  VE L GV    V AG + +  L  
Sbjct: 810  HSLVLACDGTVWSWGGNSQGQLGDGGVTSRAY-PAKVEGLWGVVA--VLAGGDSSMVLRA 866

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V T G+N  GQLG G   DR +P  +  L  + + V    G ++ L V+ +G V+++
Sbjct: 867  DGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVM---GEAHALVVSQDGTVWAW 923

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV-VRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G+     LG G       P      R  G+   + VS G  + +A+   G V++WG    
Sbjct: 924  GANGRGQLGDGTTTSSASP-----VRVAGLSAAMNVSVGQAYSLAVLPDGTVWSWGANDS 978

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LG G  + +T P+P+  L    AV
Sbjct: 979  GQLGDGTNVARTTPKPVQDLADVKAV 1004



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQ 220
           A+   +V+A   H+ +V Q+G V+  G N S   G   T    F+  + + + G+     
Sbjct: 47  ASATSKVAAGAQHSLYVTQAGTVWAWGGNGS---GQLGTGSVSFQRVVAQQVPGLTDVTS 103

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG   +  L     V T G N  GQ+G G  +DRPTP+ +  L +   VV +AAG  +
Sbjct: 104 IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSD---VVAVAAGEFH 160

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+  +G V+++  GSNF    G  H +  P   Q     G  VV ++AG +  +A+ S
Sbjct: 161 SLALRADGTVWAW--GSNFYGQLGRGHSQPGPSPAQVVGLTG--VVALAAGFDFSLAVRS 216

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G V+ WG    G LG G  I +  P  +S L+   AV
Sbjct: 217 DGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSAV 254



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 28/265 (10%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
           +  G  H +++ ++ ++++ G    G LGHG       PE       TR++     +V  
Sbjct: 354 LAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPEV-----VTRLS-----NVAS 403

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V++   H+   L  G V+T G N++   G   T      P  V  L GV     +   +F
Sbjct: 404 VASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHL-PVRVPGLSGVVSVSASGHHSF 462

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              L   G V   G N  GQ+G G T DR +P   A +E + SV  +A+G S+M+A+  +
Sbjct: 463 A--LRSDGTVWGWGRNAQGQMGDGTTKDRASP---ARVEGLSSVKALASGGSHMVALRTD 517

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G      LG G   D   P  +Q     G  V  V+AG    +AL + G V+ W
Sbjct: 518 GTVWTWGYNGAGQLGDGTTTDRRAP--VQVTGLSG--VTSVAAGAYFSLALRTDGTVWAW 573

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSL 372
           G G+ G LG G  + +  P  ++ L
Sbjct: 574 GDGFEGQLGDGAGVQRASPVQVTGL 598



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 15/250 (6%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L+ +  VF+ G +  G LG G   T   S   +       V  ++A   HA  +   G 
Sbjct: 313 VLLDDGGVFAWGLNSQGQLGIG---TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGT 369

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++T G  ++   GH  + R +  P +V  L  V    V +G   +      G V T G N
Sbjct: 370 LWTWGHGATGQLGHGSSER-MLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRN 426

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T+GQLG G T +R  P  +  L     VV ++A   +  A+  +G V+ +G  +   +G 
Sbjct: 427 TNGQLGDGTTTERHLPVRVPGLS---GVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGD 483

Query: 304 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G   D   P      R +G+  V+ +++G  H+VAL + G V+TWG    G LG G   D
Sbjct: 484 GTTKDRASPA-----RVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTD 538

Query: 363 KTLPEPLSSL 372
           +  P  ++ L
Sbjct: 539 RRAPVQVTGL 548



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 118/249 (47%), Gaps = 14/249 (5%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G +H++  +S+ SV++ G +  G LG G  T + +    +  P  + VV VSAS +H
Sbjct: 404 VASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLP---VRVPGLSGVVSVSASGHH 460

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+  G N+    G   T +    P  VE L  V  K + +G +    L   
Sbjct: 461 SFALRSDGTVWGWGRNAQGQMGD-GTTKDRASPARVEGLSSV--KALASGGSHMVALRTD 517

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G N  GQLG G T DR  P  +  L  V SV   AAG  + LA+  +G V+++G
Sbjct: 518 GTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV---AAGAYFSLALRTDGTVWAWG 574

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G       P  +    R    VV+++AG  H +A+   G V+ WG    G 
Sbjct: 575 DGFEGQLGDGAGVQRASPVQVTGLTR----VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQ 630

Query: 355 LGHGDEIDK 363
           +G G   D+
Sbjct: 631 MGDGSWSDR 639



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 15/269 (5%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +T G +H + +  + +V+  G++  G +G G   T    F  +      + V+ SA E H
Sbjct: 1004 VTAGAHHVVAVRHDGTVWGWGANAFGQVGDG---THFWRFRPVRVEGLLNAVETSAGEQH 1060

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFL 231
            +  +L   +  + G +     G  ++  P   P   +L  +   VP   V+A       L
Sbjct: 1061 SLALLGDERALSWGSHEYGQLGDAESG-PSLEPVGVKLPSSKVLVPAVSVSAWHQHAAAL 1119

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
               G V T G N  GQLG G T  R TP ++A L   G++V +A    + LA+  +G V+
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGL---GAMVAVAPAARHTLALRSDGTVW 1176

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            ++G  +   LG G       P  +    +    V  ++AG  H +A+   G V+ WG   
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLPVQVVGLEK----VTAIAAGSYHSLAVREDGTVWAWGYNV 1232

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
             G LG G    + +P  +  L   +AV G
Sbjct: 1233 FGQLGDGTMDARAVPTRMLGLDGAVAVAG 1261



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 20/254 (7%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G YH+L +  + +V++ G ++ G LG G    + V    +    A   V V+  E H
Sbjct: 1209 IAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGA---VAVAGGEYH 1265

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  +   G ++  G+NS    G    TNR    P  V  L  V  + V AG   +  L  
Sbjct: 1266 SLMLRFDGTLWATGNNSHGQLGEGTFTNR--LSPFQVVELDQV--RTVRAGGYHSVALRE 1321

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V T G N  GQLG G    R  P   AP+  + ++  + AG S+  AV      +++
Sbjct: 1322 DGTVWTWGHNGQGQLGDGTVTTRRVP---APVPGLTAIASVGAGTSHTFAVGSE--TWAW 1376

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 352
            G  S+  LG G+  D L+P  +     KG+H V+ V AG +  VA  + G   +WG    
Sbjct: 1377 GRNSHGQLGTGDSSDRLEPTLV-----KGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVH 1431

Query: 353  GALGHGDEIDKTLP 366
            G LG G    +T+P
Sbjct: 1432 GTLGIGLPGQRTVP 1445



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 17/256 (6%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L+++ +V + G +  G LG G   ++    T I       +V V+ +  H   +   G V
Sbjct: 1119 LLADGTVQTWGGNADGQLGDGTTESRA---TPITVAGLGAMVAVAPAARHTLALRSDGTV 1175

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGS 242
            +  GDN+    G     R    P  V  L+ V    + AG   +  L +R  G V   G 
Sbjct: 1176 WAWGDNTFGQLGDGSNTRRTL-PVQVVGLEKVTA--IAAGSYHS--LAVREDGTVWAWGY 1230

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            N  GQLG G    R  P  +  L+     V +A G  + L +  +G +++ G+ S+  LG
Sbjct: 1231 NVFGQLGDGTMDARAVPTRMLGLD---GAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLG 1287

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
             G   + L P   Q      +  VR  AG  H VAL   G V+TWG    G LG G    
Sbjct: 1288 EGTFTNRLSP--FQVVELDQVRTVR--AGGYHSVALREDGTVWTWGHNGQGQLGDGTVTT 1343

Query: 363  KTLPEPLSSLKSHLAV 378
            + +P P+  L +  +V
Sbjct: 1344 RRVPAPVPGLTAIASV 1359



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 13/270 (4%)

Query: 116  ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
            +  G    +L ++ +V++ G++  G LG G   T     + +     A +      E HA
Sbjct: 855  LAGGDSSMVLRADGTVWTWGANGSGQLGDG---TLGDRASPLEVKGLAGIATGVMGEAHA 911

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
              V Q G V+  G N     G   T      P  V  L       V+ G  ++  +   G
Sbjct: 912  LVVSQDGTVWAWGANGRGQLGDGTTTSSA-SPVRVAGLS--AAMNVSVGQAYSLAVLPDG 968

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G+N  GQLG G  + R TPK   P++++  V  + AG  +++AV  +G V+ +G+
Sbjct: 969  TVWSWGANDSGQLGDGTNVARTTPK---PVQDLADVKAVTAGAHHVVAVRHDGTVWGWGA 1025

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             +   +G G      +P  ++      ++ V  SAG++H +AL       +WG    G L
Sbjct: 1026 NAFGQVGDGTHFWRFRPVRVEGL----LNAVETSAGEQHSLALLGDERALSWGSHEYGQL 1081

Query: 356  GHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
            G  +      P  +    S + V  +SV A
Sbjct: 1082 GDAESGPSLEPVGVKLPSSKVLVPAVSVSA 1111



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 19/266 (7%)

Query: 122  HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            HTL L S+ +V++ G +  G LG G  T + +    +       V  ++A   H+  V +
Sbjct: 1165 HTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLE---KVTAIAAGSYHSLAVRE 1221

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G V+  G N     G    +      R++  L G     V  G   +  L   G +   
Sbjct: 1222 DGTVWAWGYNVFGQLGDGTMDARAVPTRML-GLDGAVA--VAGGEYHSLMLRFDGTLWAT 1278

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            G+N+HGQLG G   +R +P  +  L++V +V    AG  + +A+  +G V+++G      
Sbjct: 1279 GNNSHGQLGEGTFTNRLSPFQVVELDQVRTV---RAGGYHSVALREDGTVWTWGHNGQGQ 1335

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LG G       P  +         +  V AG  H  A+ S    + WG+   G LG GD 
Sbjct: 1336 LGDGTVTTRRVPAPVPGL----TAIASVGAGTSHTFAVGSE--TWAWGRNSHGQLGTGDS 1389

Query: 361  IDK---TLPEPLSSLKSHLAVQGLSV 383
             D+   TL + L  +KS LA    SV
Sbjct: 1390 SDRLEPTLVKGLHGVKSVLAGGDFSV 1415



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M ++ G+ ++L ++ + +V+S G++  G LG G   T     T       A V  V+A  
Sbjct: 952  MNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDG---TNVARTTPKPVQDLADVKAVTAGA 1008

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            +H   V   G V+  G N+    G   T+   FRP  VE L  +   + +AG   +  L 
Sbjct: 1009 HHVVAVRHDGTVWGWGANAFGQVGD-GTHFWRFRPVRVEGL--LNAVETSAGEQHSLALL 1065

Query: 233  IRGHVHTCGSNTHGQLGHGDT--------LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                  + GS+ +GQLG  ++        +  P+ K + P       V ++A   +  A+
Sbjct: 1066 GDERALSWGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVP------AVSVSAWHQHAAAL 1119

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              +G V ++G  ++  LG G       P  +         +V V+    H +AL S G V
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGLG----AMVAVAPAARHTLALRSDGTV 1175

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            + WG    G LG G    +TLP  +  L+   A+
Sbjct: 1176 WAWGDNTFGQLGDGSNTRRTLPVQVVGLEKVTAI 1209



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 125/315 (39%), Gaps = 36/315 (11%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG 145
           +G+W    R +Q        V    G   +  G YH++ L  + ++ + G +  G  G G
Sbjct: 633 DGSWSDRFRAVQ--------VYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDG 684

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T + V+      P  + +  + AS  H   V + G + T G N     G         
Sbjct: 685 GVTPRVVAGA---VPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL 741

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            P  V  L     ++++AG   +  +   G V   G NT GQLG G T  R +P     L
Sbjct: 742 -PVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNL 798

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
                    +AG  + L +  +G V+S+G  S   LG G       P  ++        V
Sbjct: 799 P---CARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGL----WGV 851

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS--- 382
           V V AG +  + L + G V+TWG    G LG G   D+  P         L V+GL+   
Sbjct: 852 VAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASP---------LEVKGLAGIA 902

Query: 383 --VLAEVCPTIVQED 395
             V+ E    +V +D
Sbjct: 903 TGVMGEAHALVVSQD 917



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 8/166 (4%)

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD- 252
           C G      P   P            +V AG   + ++T  G V   G N  GQLG G  
Sbjct: 26  CEGTSSPAEPSHPPAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSV 85

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           +  R   + +  L +V S   IAAG ++ LA+  +  V+++G  +   +G G   D   P
Sbjct: 86  SFQRVVAQQVPGLTDVTS---IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTP 142

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           + +         VV V+AG+ H +AL + G V+ WG  + G LG G
Sbjct: 143 QKVPGLS----DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRG 184



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 13/241 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +   L S+ +V+  G +  G +G G  T    S  R+   S+  V  +++  +H   
Sbjct: 457 SGHHSFALRSDGTVWGWGRNAQGQMGDG-TTKDRASPARVEGLSS--VKALASGGSHMVA 513

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   G V+T G N +   G   T      P  V  L GV    V AG  F+  L   G V
Sbjct: 514 LRTDGTVWTWGYNGAGQLGD-GTTTDRRAPVQVTGLSGV--TSVAAGAYFSLALRTDGTV 570

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G    GQLG G  + R +P  +  L     VV++AAG ++ LAV  +G V+++G  +
Sbjct: 571 WAWGDGFEGQLGDGAGVQRASPVQVTGLTR---VVKLAAGAAHGLAVRDDGTVWAWGDNT 627

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              +G G   D    RA+Q +   G+    V  G  H +AL   G +  WG    G  G 
Sbjct: 628 EGQMGDGSWSDRF--RAVQVYGLTGVS--SVVGGLYHSMALAQDGTLRAWGGNAYGQFGD 683

Query: 358 G 358
           G
Sbjct: 684 G 684



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 112  GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G + +  G YH+L++  + ++++ G++  G LG G  T +   F  +       V  V A
Sbjct: 1255 GAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVELD---QVRTVRA 1311

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H+  + + G V+T G N     G    T R +  P  V  L  +    V AG + T 
Sbjct: 1312 GGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRV--PAPVPGLTAIAS--VGAGTSHT- 1366

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
               +       G N+HGQLG GD+ DR  P  +  L  V SV+   AG  + +A   +G 
Sbjct: 1367 -FAVGSETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHGVKSVL---AGGDFSVAQGADGS 1422

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAI 315
              S+G+  +  LG G       P A+
Sbjct: 1423 AMSWGTNVHGTLGIGLPGQRTVPGAV 1448


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 18/259 (6%)

Query: 110 SAGNMQ-ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           S GN Q +  G+Y T  +S +  V SCG    G LG G    Q  +   I F     + +
Sbjct: 313 SFGNSQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQS-TLKTIVFDPPQTIRK 371

Query: 168 VSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE---ALKGVPCKQV 221
           +S+S   + H   +   G +F+ GD      GH  ++     P+++E   A + V C  V
Sbjct: 372 ISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGH-GSSLTHKSPKIIEGPLARRIVVC--V 428

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           +AG   +  +T  G + T G   +G+LG GD   R  P  +  +   GSVV    G S+ 
Sbjct: 429 SAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAGSVV---CGSSHT 485

Query: 282 LAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           L +  +G+ V+SFG+G N  LGHG+     +P+ I++    G+   ++ AG ++ +AL+ 
Sbjct: 486 LVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESI--NGMMFYKLCAGSQYSLALND 543

Query: 341 SGYVYTWGKGYCGALGHGD 359
           SG V++WG G C   G  D
Sbjct: 544 SGQVFSWGCGACLGCGSPD 562



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 122/248 (49%), Gaps = 23/248 (9%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL L +   +FS G    G LGHG   T   S   I  P A  +V  VSA   H+A V 
Sbjct: 381 HTLALTTEGCIFSWGDGDYGKLGHGSSLTH-KSPKIIEGPLARRIVVCVSAGYRHSACVT 439

Query: 180 QSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-HV 237
           Q GQ+FT G+      G  D T+R +  P LV+ +       V  G + T  L   G  V
Sbjct: 440 QEGQLFTWGEGDYGRLGLGDNTSRNV--PVLVKDIAS--AGSVVCGSSHTLVLAQDGLTV 495

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G+  +G+LGHGDT     PK I  +  +    ++ AG  Y LA+  +G V+S+G G+
Sbjct: 496 WSFGAGDNGKLGHGDTSRVYRPKVIESINGM-MFYKLCAGSQYSLALNDSGQVFSWGCGA 554

Query: 298 NFCLGHGEQHDE-LQPRAIQ--TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GY 351
             CLG G      ++P  I   TF R    VV +++GD H +AL  +  VY WG    G 
Sbjct: 555 --CLGCGSPDATFMKPTLIDELTFTR----VVDITSGDGHCMALTHNNEVYCWGNNAMGQ 608

Query: 352 CGALGHGD 359
           CG LGH +
Sbjct: 609 CG-LGHTN 615



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 6/185 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       +++ +F P+ V++      + + AG   T  ++  G V +CG  
Sbjct: 286 VYAWGSNSSHQLAELGSDKIVF-PKKVKSFGN--SQMLEAGQYCTFAVSGDGCVRSCGKG 342

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++ T K+I   P + +  +        + LA+T  G ++S+G G    L
Sbjct: 343 SYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIFSWGDGDYGKL 402

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG       P+ I+    + I VV VSAG  H   +   G ++TWG+G  G LG GD  
Sbjct: 403 GHGSSLTHKSPKIIEGPLARRI-VVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNT 461

Query: 362 DKTLP 366
            + +P
Sbjct: 462 SRNVP 466



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 5/143 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G + + G   +G+LGHG +L   +PK I        VV ++AG  +   VT  G +
Sbjct: 385 LTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQL 444

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGK 349
           +++G G    LG G+      P  ++     G     V  G  H + L   G  V+++G 
Sbjct: 445 FTWGEGDYGRLGLGDNTSRNVPVLVKDIASAG----SVVCGSSHTLVLAQDGLTVWSFGA 500

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
           G  G LGHGD      P+ + S+
Sbjct: 501 GDNGKLGHGDTSRVYRPKVIESI 523



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 9/185 (4%)

Query: 106 IVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +V+  A    +  G  HTL+++    +V+S G+   G LGHG +T++      I   +  
Sbjct: 468 LVKDIASAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHG-DTSRVYRPKVIESINGM 526

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
              ++ A   ++  +  SGQVF+ G  +   CG  D      +P L++ L       +T+
Sbjct: 527 MFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDAT--FMKPTLIDELTFTRVVDITS 584

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYM 281
           G      LT    V+  G+N  GQ G G T + P   P  +  L  V ++ QI+AG S+ 
Sbjct: 585 GDGHCMALTHNNEVYCWGNNAMGQCGLGHT-NSPISVPTQVQQLNNV-TIHQISAGTSHS 642

Query: 282 LAVTG 286
           +A T 
Sbjct: 643 IAYTA 647


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 26/253 (10%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +  V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+V TC
Sbjct: 432 DREVWSCGQNSYGELGHG-DTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTC 490

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVP------CKQVTA--GLNFTGFLTIRGHVHT 239
           G N +  CG   T R       V  L  +P        QV A  G   T  +T+ G   T
Sbjct: 491 GYNDNGQCGQGGTAR-------VSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAAT 543

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------TGNGVVYSF 293
           CG N  GQLGHG+T     PK +  LE    +V++ +   Y   +      +G   +Y+F
Sbjct: 544 CGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLYTF 601

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGH +  D   P+ ++    +  HVV V+ G  H + + ++G  + +GK   G
Sbjct: 602 GRNDYGQLGHNDSIDRKVPQHVEAMGDQ--HVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 354 ALGHGDEIDKTLP 366
            LG     ++ +P
Sbjct: 660 QLGIDSMENQLVP 672



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 13/198 (6%)

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +V++CG NS    GH DT +R  F    +E+L+     Q+ AG   T  LT+ G V TCG
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSF--ERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCG 491

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNF 299
            N +GQ G G T  R +     P     ++ Q+ A  G  + + VT +G   + G     
Sbjct: 492 YNDNGQCGQGGTA-RVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRG 550

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSSG--YVYTWGKGYCGA 354
            LGHG    E  P+ +++   + + +  VS    H V     D SG  Y+YT+G+   G 
Sbjct: 551 QLGHGNTASESVPKIVRSLENRIVRL--VSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQ 608

Query: 355 LGHGDEIDKTLPEPLSSL 372
           LGH D ID+ +P+ + ++
Sbjct: 609 LGHNDSIDRKVPQHVEAM 626



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 1/141 (0%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + +A+T +G V + G 
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQ-KEIIQIGAGNEHTIALTVDGKVLTCGY 492

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N   G G          +       I  V    G EH + +   G   T G  Y G L
Sbjct: 493 NDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552

Query: 356 GHGDEIDKTLPEPLSSLKSHL 376
           GHG+   +++P+ + SL++ +
Sbjct: 553 GHGNTASESVPKIVRSLENRI 573



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 22/269 (8%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HT+L++ +    +CG +  G LGHG   T   S  +I       +V+ VS S  H     
Sbjct: 531 HTILVTMDGRAATCGYNYRGQLGHG--NTASESVPKIVRSLENRIVRLVSCSYYHTVMAC 588

Query: 180 Q---SGQ--VFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +   SGQ  ++T G N     GH D+ +R +  P+ VEA+       V  G   T  +T 
Sbjct: 589 EEDGSGQQYLYTFGRNDYGQLGHNDSIDRKV--PQHVEAMGDQHVVSVACGQYHTMVVTA 646

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G     G N +GQLG     ++  P  +    E    ++I  G  + + +     +++F
Sbjct: 647 TGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAF 706

Query: 294 GSGSNFCLGHGEQHD------ELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGY 343
           G      LG G  +       +LQ +     R     +G  +VR + G  H VA+  +G 
Sbjct: 707 GRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGV 766

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +Y +G+   G LG GD  ++  P P+   
Sbjct: 767 MYVFGRNNHGQLGTGDTNERVYPFPIDDF 795



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 15/186 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G+YHT++++ +   F+ G +  G LG      Q V             +++    
Sbjct: 632 VSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGY 691

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----------RPIFRPRLVEALKGVPCKQV 221
            H   +     +F  G N     G    N           +     RL+E L+G    + 
Sbjct: 692 YHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRF 751

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSY 280
             G   T  ++  G ++  G N HGQLG GDT +R  P  I     VG  V  +AAG  +
Sbjct: 752 ACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDF--VGKRVALVAAGFYH 809

Query: 281 MLAVTG 286
            + +TG
Sbjct: 810 TVVLTG 815


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 20/257 (7%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            S+ +V  +AG      G   T+L S+ +V++ G +  G LG+G E      F +++   
Sbjct: 32  ESTSVVSINAG------GYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSY-FGKVD--E 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              VV + +  +H   + + G V+  G NS       +  + I RP  +  LK +   QV
Sbjct: 83  LYDVVSLDSDMDHTLAITKHGTVWGWGYNSKGEI--TEGGKNIARPVQINGLKDIV--QV 138

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + GL  +  L   G V + G N +GQLG+G   D   P  +   E + ++V I AG  + 
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKV---EFLSNIVAIEAGAEHS 195

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +G V+++G      LG+GE      PR ++       ++  ++ GD H +ALD  
Sbjct: 196 LALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLE----NIEMIAGGDNHSLALDHD 251

Query: 342 GYVYTWGKGYCGALGHG 358
           G ++ WG    G +G G
Sbjct: 252 GAIWAWGYNSNGQIGDG 268



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++TG  H+L +  S +V+S G ++ G LG+G      +  T++ F S  ++V + A  
Sbjct: 136 VQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIP-TKVEFLS--NIVAIEAGA 192

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G+V+  G N     G+ +T +    PRLV+ L+ +  + +  G N +  L 
Sbjct: 193 EHSLALSNDGKVWAWGRNEFGQLGNGETEKSNI-PRLVKNLENI--EMIAGGDNHSLALD 249

Query: 233 IRGHVHTCGSNTHGQLGHG-------DTLDRPTPKSIAPLEE---VGSVVQIAAGPSYML 282
             G +   G N++GQ+G G       D   R       P++     G V Q++AG  +  
Sbjct: 250 HDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHST 309

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T NG VY++G      LG+G   D   P      R     ++ +  G  H  A+D SG
Sbjct: 310 ALTENGEVYAWGWNEYGQLGNGSMKDSKVPLRNNVGRS----IIDIETGSYHSFAVDESG 365

Query: 343 YVYTWGKGYCGALGHG 358
            +Y WG    G LG G
Sbjct: 366 VIYAWGDATYGQLGDG 381



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 20/255 (7%)

Query: 122 HTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL I+   +V+  G +  G +  G +        +IN      +VQVS    H+  + Q
Sbjct: 95  HTLAITKHGTVWGWGYNSKGEITEGGKN--IARPVQIN--GLKDIVQVSTGLVHSLALDQ 150

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG V++ G+N     G+  TN+    P  VE L  +    + AG   +  L+  G V   
Sbjct: 151 SGAVWSWGENIYGQLGN-GTNQDSSIPTKVEFLSNIVA--IEAGAEHSLALSNDGKVWAW 207

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG+G+T     P+ +  LE   ++  IA G ++ LA+  +G ++++G  SN  
Sbjct: 208 GRNEFGQLGNGETEKSNIPRLVKNLE---NIEMIAGGDNHSLALDHDGAIWAWGYNSNGQ 264

Query: 301 LGHG-----EQHDELQPRAIQT--FRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G G     E+  +L+ +  +T   +  G++  V +VSAG +H  AL  +G VY WG   
Sbjct: 265 IGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNE 324

Query: 352 CGALGHGDEIDKTLP 366
            G LG+G   D  +P
Sbjct: 325 YGQLGNGSMKDSKVP 339



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 16/226 (7%)

Query: 159 FPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           FP  +    VV ++A    +  +   G V+T G N+    G+       +  ++ E    
Sbjct: 27  FPKNSESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYDV 86

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 274
           V    + + ++ T  +T  G V   G N+ G++  G   + RP    I  L+++   VQ+
Sbjct: 87  VS---LDSDMDHTLAITKHGTVWGWGYNSKGEITEGGKNIARPV--QINGLKDI---VQV 138

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G  + LA+  +G V+S+G      LG+G   D   P  ++       ++V + AG EH
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLS----NIVAIEAGAEH 194

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            +AL + G V+ WG+   G LG+G+     +P  + +L++   + G
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAG 240


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 4/240 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+V+T
Sbjct: 45  NDEVFVLGMNCSGCLGTG-DMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYT 103

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN      ++   L      +V  G + +  LT  G V+T G N  G
Sbjct: 104 WGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSG 163

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G  
Sbjct: 164 QVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSS 223

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 224 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 281



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +  ++ +VF  G N S C G  D    I  PR +++L  K + C    +G +    
Sbjct: 37  NEVLYATENDEVFVLGMNCSGCLGTGDMQSTI-EPRRLDSLCGKKIACLSYGSGPHVV-L 94

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V+T G N + QLG+G T     P  ++       V+++A G  + + +T +G V
Sbjct: 95  ATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 154

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G  ++  +G G   ++  PR + +  +  I VV ++ G    +A+  +G VY WG  
Sbjct: 155 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI-VVNIACGQMCSMAVVENGEVYVWGYN 213

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 214 GNGQLGLGSSGNQPTPCRIAALQ 236



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 136 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQ 195

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 196 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGYAHTLVL 253

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   V++IAA  S     A T +G 
Sbjct: 254 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKD--RVIEIAACHSAHTSAAKTQSGQ 311

Query: 290 VYSFG 294
           VY +G
Sbjct: 312 VYMWG 316



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 7/196 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E LK +   C   +AG N   + T    V   G N  G LG GD      P+
Sbjct: 13  PIFSLCSQEELKLIRQACVFGSAG-NEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPR 71

Query: 261 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G VY++G  +   LG+G  +    P  + T  
Sbjct: 72  RLDSLCGKKIACLSYGSGPHVVLA-TEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVST-N 129

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S   +  V 
Sbjct: 130 LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVV 189

Query: 380 GLSVLAEVCPTIVQED 395
            ++   ++C   V E+
Sbjct: 190 NIAC-GQMCSMAVVEN 204


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 111/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCSGCLGLG-DAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSG 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 TPVVVEKDRI 310



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N S C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYSTVNDEIFVLGTNCSGCLGLGDAQSTI-EPRRLDSLSGKKIACLSYGSGPHVV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 233 GNGQLGLGSGGNQPTPCRVAALQ 255



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G GP   Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+ +G+V+  G N +   G     N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S     A T  G 
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSTHTSAAKTQGGH 330

Query: 290 VYSFG 294
           VY +G
Sbjct: 331 VYMWG 335


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 4/243 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   +++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   +V IA G    +AV   G V+ +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPL 369
            P+
Sbjct: 301 TPV 303



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 3/138 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177

Query: 349 KGYCGALGHGDEIDKTLP 366
               G +G G   ++ +P
Sbjct: 178 YNNSGQVGSGSTANQPIP 195



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  ++  G+    CLG G+    ++PR + +   K I  +   +G  HVV   +
Sbjct: 58  VLYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSG-PHVVLATT 116

Query: 341 SGYVYTWGKGYCGALGHG 358
            G V+TWG      LG+G
Sbjct: 117 EGEVFTWGHNAYSQLGNG 134


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G +HT+ +S +  +++ G+   G LG+G E+  C     I F S  +VV ++A  
Sbjct: 198 LTVECGEFHTVALSKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           + +  +  +G++++ G NS    G       D       P LVEA  G+  KQ+ AG + 
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDH 316

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              +T  G ++  GS    +           P  +  + E   +VQ+A G  Y +A++ N
Sbjct: 317 AAAVTDDGRLYMWGSKIWIE-----------PHEMTAVNEY-KMVQVACGRQYTVALSEN 364

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G V++FG GS+ CLGHG++ ++LQP  I+      +++  +S GD H+ A+
Sbjct: 365 GEVFTFGKGSSNCLGHGDRKNQLQPVQIEALAD--VNITSISCGDYHMGAI 413



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 15/207 (7%)

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFT 228
           AF  QS  V+T G+ +    GH    +   R       P+L+EA +G     V  G + +
Sbjct: 37  AFSTQS-SVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHS 95

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
             +   G ++  GSN + +LG G++ +  T P+ +  L+ V  +V ++ G  +  AV  +
Sbjct: 96  AAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGV-KIVDVSCGDYFTAAVDAD 154

Query: 288 GVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G +YS+G G +       LGH    DE  PR + T   +G+ ++ V  G+ H VAL   G
Sbjct: 155 GKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDG 214

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPL 369
            ++ WG G  G LG+G+     +PEP+
Sbjct: 215 EIWAWGNGEYGRLGNGESDTCEVPEPI 241



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 17/246 (6%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCV--SFTRIN------FPSAAHVVQVSASENHAAFV 178
           + SSV++ G+   G LGHGP     +  ++  +       F   A +  V    +H+A +
Sbjct: 40  TQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKA-ITHVEFGASHSAAI 98

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            + G+++  G N     G  +++     PR VEALKGV    V+ G  FT  +   G ++
Sbjct: 99  DEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMY 158

Query: 239 TCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
           + G         G LGH    D PTP+ +  L + G  ++ +  G  + +A++ +G +++
Sbjct: 159 SWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWA 218

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+G    LG+GE      P  I+ F +   +VV ++AG +   AL  +G +Y+WG    
Sbjct: 219 WGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDNGELYSWGGNSQ 276

Query: 353 GALGHG 358
             LG G
Sbjct: 277 NQLGIG 282



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 19/213 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++ V   E H   + + G+++  G+      G+ +++     P  +E         + AG
Sbjct: 197 ILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEV-PEPIEFFSKDNVVSIAAG 255

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVG---SVVQIAAGPS 279
            +F+  LT  G +++ G N+  QLG G  L  D    +SI  L E     SV QIAAG  
Sbjct: 256 RDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYD 315

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  AVT +G +Y +GS         E H   +  A+  ++     +V+V+ G ++ VAL 
Sbjct: 316 HAAAVTDDGRLYMWGSKIWI-----EPH---EMTAVNEYK-----MVQVACGRQYTVALS 362

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +G V+T+GKG    LGHGD  ++  P  + +L
Sbjct: 363 ENGEVFTFGKGSSNCLGHGDRKNQLQPVQIEAL 395



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 11/93 (11%)

Query: 290 VYSFGSGSNFCLGHG--------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           VY++G+G+   LGHG          ++EL P+ ++ F  K I    V  G  H  A+D  
Sbjct: 44  VYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAI--THVEFGASHSAAIDED 101

Query: 342 GYVYTWGKGYCGALGHGDEID-KTLPEPLSSLK 373
           G +Y WG      LG G+  + +TLP  + +LK
Sbjct: 102 GKLYVWGSNEYSKLGLGESSEMETLPREVEALK 134


>gi|326428031|gb|EGD73601.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818]
          Length = 2192

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 125/290 (43%), Gaps = 11/290 (3%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  HTL+  SN  + S G++ CG LG             +        + VS     
Sbjct: 1049 VACGAQHTLVAQSNGQMLSFGNNTCGALGRVCADDATAENPPMKMRLRRQFIYVSCGPRS 1108

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +  V  +G V++ GDN+    G       + RPR+V AL  V   Q+++    T FL   
Sbjct: 1109 SFAVTTNGTVYSWGDNTHRTLGIASRASSMARPRIVVALNCVHIVQISSNEFHTLFLDKH 1168

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V  CG   HGQLG       PTP+ I   E V  + Q++AG  + LA+  NG VY +G
Sbjct: 1169 GRVFVCGHGQHGQLGFRGRKKAPTPRPIPAFENV-VIKQVSAGRFHSLALATNGAVYVWG 1227

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
               +           +Q   + T R +G +VV+V AGD    AL S+G V+ WG      
Sbjct: 1228 RPVSSA-------PVMQTPQLVT-RLRGRNVVKVVAGDSVSYALTSTGQVWAWGSPDIPE 1279

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCSDIIC 404
            L   D+ D   P+ L  L  HL  + +      C   + +  ++    IC
Sbjct: 1280 LLCTDKADMPTPKQL-PLPEHLHAEDICCGFGFCAASLSQREKTQDSRIC 1328


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 4/240 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+V+T
Sbjct: 40  NDEVFVLGMNCSGCLGTG-DMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN      ++   L      +V  G + +  LT  G V+T G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 219 GNQPTPCRIAAL--QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 276



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +  ++ +VF  G N S C G  D    I  PR +++L  K + C    +G +    
Sbjct: 32  NEVLYATENDEVFVLGMNCSGCLGTGDMQSTI-EPRRLDSLCGKKIACLSYGSGPHVV-L 89

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V+T G N + QLG+G T     P  ++       V+++A G  + + +T +G V
Sbjct: 90  ATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G  ++  +G G   ++  PR + +  +  I VV ++ G    +A+  +G VY WG  
Sbjct: 150 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI-VVNIACGQMCSMAVVENGEVYVWGYN 208

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 209 GNGQLGLGSSGNQPTPCRIAALQ 231



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 131 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 191 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGYAHTLVL 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   V++IAA  S     A T +G 
Sbjct: 249 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKD--RVIEIAACHSAHTSAAKTQSGQ 306

Query: 290 VYSFG 294
           VY +G
Sbjct: 307 VYMWG 311



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 7/196 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E +K +   C   +AG N   + T    V   G N  G LG GD      P+
Sbjct: 8   PIFSLCSPEEIKLIRQACVFGSAG-NEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPR 66

Query: 261 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G VY++G  +   LG+G  +    P  + T  
Sbjct: 67  RLDSLCGKKIACLSYGSGPHVVLA-TEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V+ V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S   +  V 
Sbjct: 125 LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVV 184

Query: 380 GLSVLAEVCPTIVQED 395
            ++   ++C   V E+
Sbjct: 185 NIAC-GQMCSMAVVEN 199


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 7/230 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +T G YHT  + SN  +++ G  + G LGHG E+       R+       +V ++    
Sbjct: 37  HVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTP-RRVEALVGLSIVDIACGSR 95

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V   G ++T GD  +   GH DT    + P+L+E L G    Q++A    T  LT 
Sbjct: 96  HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTD 155

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYS 292
                  G    G+LG+G   +  +P+ I  L  +G    Q+A G  +   +T +G +Y+
Sbjct: 156 DHETFAWGEGKFGRLGNGTERNCHSPRLIESL--IGKYPCQVACGGFHSAVITRDGKMYT 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           FG G +  LGH ++ ++L+P  ++     G+ V +++ G  H VAL S G
Sbjct: 214 FGGGEHGQLGHADKVNKLKPTLVEAL--DGVVVKQITCGWSHSVALTSEG 261



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 5/250 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VFS G    G LG G  + Q              +  V+    H A V  +G ++T G  
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH + +     PR VEAL G+    +  G   T  +T +G ++T G   +G  GH
Sbjct: 61  MYGKLGHGNESGH-STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGH 119

Query: 251 GDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           GDT   + TPK +  L     VVQ++A   +   +T +   +++G G    LG+G + + 
Sbjct: 120 GDTEGHQYTPKLLERLNGK-KVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNC 178

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             PR I++   K  +  +V+ G  H   +   G +YT+G G  G LGH D+++K  P  +
Sbjct: 179 HSPRLIESLIGK--YPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLV 236

Query: 370 SSLKSHLAVQ 379
            +L   +  Q
Sbjct: 237 EALDGVVVKQ 246



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++   +HT  L  +   F+ G    G LG+G E   C S   I      +  QV+   
Sbjct: 141 VQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTER-NCHSPRLIESLIGKYPCQVACGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+A + + G+++T G       GH D    + +P LVEAL GV  KQ+T G + +  LT
Sbjct: 200 FHSAVITRDGKMYTFGGGEHGQLGHADKVNKL-KPTLVEALDGVVVKQITCGWSHSVALT 258

Query: 233 IRGHVH 238
             G  H
Sbjct: 259 SEGEYH 264


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 11/221 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           N + F+++ G++F  G N     G          P++VE L GVP  Q++AG   +  L+
Sbjct: 73  NLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS 132

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G++++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +T +G++++
Sbjct: 133 MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALLTQDGLLFT 191

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGY 351
           FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G V+++G G 
Sbjct: 192 FGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLAYVSDFGKVFSFGSGK 249

Query: 352 CGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
            G LG+G  +D+ +P P+         L+SH + + L ++A
Sbjct: 250 DGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIA 290



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 9/235 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G     ++    +F+ G +L G LG G +     +   +   +   + Q+SA E H+  +
Sbjct: 72  GNLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 131

Query: 179 LQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG +++ G N       GH ++      P L+EAL     + +  G + +  LT  G 
Sbjct: 132 SMSGNIYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSALLTQDGL 188

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFG 294
           + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G V+SFG
Sbjct: 189 LFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFGKVFSFG 246

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           SG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W K
Sbjct: 247 SGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIK 301


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 113/249 (45%), Gaps = 9/249 (3%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ ++I +   + V QV+    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH     P  RP  +  L+     Q+  G   +  LT  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS     LG     +
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178

Query: 309 ELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             Q   P  + T    GI    ++ G  H   +  S  V+ WG+  CG LG  DE ++  
Sbjct: 179 LSQCNYPMRLTTLL--GIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAY 236

Query: 366 PEPLSSLKS 374
           P  L +L++
Sbjct: 237 PTQLKTLRT 245



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 22/268 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---EDYVITQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     GH      I  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-------PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            G +++ GSN +GQLG    +  P+       P  +  L  + +   IA G ++   ++ 
Sbjct: 157 CGELYSWGSNIYGQLG----VKSPSELSQCNYPMRLTTLLGIPAAA-IACGGNHTFLISK 211

Query: 287 NGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V
Sbjct: 212 SSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGV 267

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +T G G  G LGHG   ++ LP  +  L
Sbjct: 268 FTCGAGAYGQLGHGFSSNEMLPRMVMEL 295



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 18/199 (9%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRIN----FPSAAHVV 166
           +QI  G  H+L L     ++S GS++ G LG   P E +QC    R+      P+AA   
Sbjct: 142 VQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAA--- 198

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGL 225
            ++   NH   + +S  VF  G N+    G  D TNR    P  ++ L+ +  + V  G 
Sbjct: 199 -IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGD 255

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA- 283
            F+ FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA 
Sbjct: 256 EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLAL 313

Query: 284 VTGNGVVYSFGSGSNFCLG 302
           V   G +Y FG GS+  LG
Sbjct: 314 VPSRGRIYGFGLGSSGQLG 332



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 17/249 (6%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAH-----VVQVSAS 171
           G YH  L+S    V++ G++  G LG          ++R+ + PS  H     VV  S  
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGR--------DYSRLWSLPSELHLPNVFVVSASCG 52

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G+VF+ GD ++   GH +  R    P+ + +L+      + AG   +  +
Sbjct: 53  GMHTLLLSKEGKVFSFGDGANGRLGHGNC-RNYSLPQPIASLESKRITFIAAGWTHSMAI 111

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVV 290
              G + T G    G+LGHG+ LD   P+ +  L  +     +A+G     AV   NG V
Sbjct: 112 DDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTV 171

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G G +  LG G     L+P  +++     +H+V VS G  H  A+ + G + TWG+G
Sbjct: 172 WTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRG 231

Query: 351 YCGALGHGD 359
             G LGHG+
Sbjct: 232 DWGQLGHGN 240



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V+T G+N  GQLG   +     P  +  L  V  VV  + G  + L ++  G V+SFG
Sbjct: 12  GDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNV-FVVSASCGGMHTLLLSKEGKVFSFG 69

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G+N  LGHG   +   P+ I +   K   +  ++AG  H +A+D  G ++TWG G  G 
Sbjct: 70  DGANGRLGHGNCRNYSLPQPIASLESK--RITFIAAGWTHSMAIDDDGKLFTWGCGNAGR 127

Query: 355 LGHGDEIDKTLPEPLSSL 372
           LGHG+ +D   P  +  L
Sbjct: 128 LGHGNVLDVWRPRFVDRL 145



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           GP +   V+G G VY++G+  NF    G  +  L     +      + VV  S G  H +
Sbjct: 1   GPYHAALVSGLGDVYTWGA--NFFGQLGRDYSRLWSLPSE-LHLPNVFVVSASCGGMHTL 57

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            L   G V+++G G  G LGHG+  + +LP+P++SL+S
Sbjct: 58  LLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLES 95


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 102/227 (44%), Gaps = 16/227 (7%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRPRLVEALK 214
            +A   +++         V   G+VF CGD+S       FC         +  PR +  L 
Sbjct: 2624 TALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFC-------GKVSSPRQIPGLS 2676

Query: 215  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                K V   +G      L++ G V + G    G+LGHGD L   TPK I  L     V 
Sbjct: 2677 QFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLL-AKRVF 2735

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
             IA G ++  A+T +G +Y++G G    LGH ++  +  P+ ++ F  K I  V   + D
Sbjct: 2736 YIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRD 2795

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
               +ALDS G VY+WG G  G LG G       P+ +  L  H  VQ
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQ 2842



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 7/257 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L +   V++ G    G LG G   T       +   S   ++ ++    H+A +
Sbjct: 3642 GRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKP-QLVQSLSDKCIIDIACGGFHSAAI 3700

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             + G ++T G       GH D    ++ P+LV+ L      +V   +G   T  +T   +
Sbjct: 3701 SRYGHLYTWGKGRYGRLGHGDYEDYLY-PKLVQGLINYHVVKVACGSGDAQTMCVTSDDN 3759

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G   +G+LGH  +     P  I  L   G ++QI  G  + +A++ NG +Y++G G
Sbjct: 3760 VWSWGDGDYGKLGHNISESCKLPCKIESLSGKG-IIQIDCGSQFSVALSANGTLYTWGKG 3818

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ +   +  G  +V+ S G  HV+AL   G VY WG    G LG
Sbjct: 3819 DYFRLGHGSSEHVRKPKPVSGLQ--GKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLG 3876

Query: 357  HGDEIDKTLPEPLSSLK 373
             G       P P+++LK
Sbjct: 3877 DGTAHPIARPRPIAALK 3893



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 13/256 (5%)

Query: 131  VFSCGSSLCGVLGHGP---ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
            V++ G +  G LG GP   +    V+   +   +    V V++   H   +  +G+V+  
Sbjct: 3598 VYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAW 3657

Query: 188  GD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            GD  +     G+R T+    +P+LV++L       +  G   +  ++  GH++T G   +
Sbjct: 3658 GDGDDGKLGLGNRVTHS---KPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRY 3714

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            G+LGHGD  D   PK +  L     VV++A  +G +  + VT +  V+S+G G    LGH
Sbjct: 3715 GRLGHGDYEDYLYPKLVQGLINY-HVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGH 3773

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                    P  I++   KGI  +++  G +  VAL ++G +YTWGKG    LGHG     
Sbjct: 3774 NISESCKLPCKIESLSGKGI--IQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHV 3831

Query: 364  TLPEPLSSLKSHLAVQ 379
              P+P+S L+    VQ
Sbjct: 3832 RKPKPVSGLQGKKIVQ 3847



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 20/289 (6%)

Query: 109  TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHV 165
            T+   ++I  G     ++SN   VF CG S  G LG  P   +  S  +I   S      
Sbjct: 2624 TALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGI-PFCGKVSSPRQIPGLSQFVIKT 2682

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V +   HA  +   G+V + GD      GH D    +  P+L+++L       +  G 
Sbjct: 2683 VAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDI-LTLDTPKLIDSLLAKRVFYIACGS 2741

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYML 282
              +  +T  G ++T G   +G+LGH D + + TPK +   E VG ++ Q+A G   +  L
Sbjct: 2742 AHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVK--EFVGKNITQVACGSRDAQTL 2799

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            A+   G VYS+G G    LG G       P+ ++  R  G  VV++  G +  VAL ++G
Sbjct: 2800 ALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVE--RLVGHRVVQIECGAQFSVALTATG 2857

Query: 343  YVYTWGKG--YCGALGHGDEIDKTLPEPLSSLK----SHLAVQGLSVLA 385
             V+TWGKG  Y   LG G+ + +  P  ++ LK     H+AV  L  +A
Sbjct: 2858 QVWTWGKGEYYRLGLGRGEHVRR--PTLVNQLKLVTIDHIAVGTLHCIA 2904



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 8/218 (3%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTA 223
            QV   E     V   G+V+  G   S   G   +   N  +  P+LV+ L  +    V +
Sbjct: 3581 QVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNS 3640

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G      L+  G V+  G    G+LG G+ +    P+ +  L +   ++ IA G  +  A
Sbjct: 3641 GGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSD-KCIIDIACGGFHSAA 3699

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSS 341
            ++  G +Y++G G    LGHG+  D L P+ +Q       HVV+V+  +GD   + + S 
Sbjct: 3700 ISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLI--NYHVVKVACGSGDAQTMCVTSD 3757

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              V++WG G  G LGH       LP  + SL     +Q
Sbjct: 3758 DNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQ 3795



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 9/243 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L  +  V S G    G LGHG   T   +   I+   A  V  ++    H+A +
Sbjct: 2689 GKHAMALSLDGKVLSWGDGEDGKLGHGDILT-LDTPKLIDSLLAKRVFYIACGSAHSAAI 2747

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
               G+++T G       GH D       P+LV+   G    QV  G      L +   G+
Sbjct: 2748 TSDGELYTWGQGQYGRLGHSDEVSQ-HTPKLVKEFVGKNITQVACGSRDAQTLALDSEGN 2806

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V++ G    G+LG G +    TP+ +  L  VG  VVQI  G  + +A+T  G V+++G 
Sbjct: 2807 VYSWGDGDFGKLGRGGSDGCCTPQKVERL--VGHRVVQIECGAQFSVALTATGQVWTWGK 2864

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LG G      +P  +     K + +  ++ G  H +A+ + G VY WG    G  
Sbjct: 2865 GEYYRLGLGRGEHVRRPTLVNQL--KLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQ 2922

Query: 356  GHG 358
            G+G
Sbjct: 2923 GNG 2925



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 3/163 (1%)

Query: 206  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            RP   EAL  +   ++  G      ++  G V  CG ++ G+LG        +P+ I  L
Sbjct: 2616 RPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGL 2675

Query: 266  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             + V   V + +G  + +A++ +G V S+G G +  LGHG+      P+ I +   K   
Sbjct: 2676 SQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAK--R 2733

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            V  ++ G  H  A+ S G +YTWG+G  G LGH DE+ +  P+
Sbjct: 2734 VFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPK 2776



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 22/243 (9%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            + I  G +H+  IS    +++ G    G LGHG       P+  Q +    IN+    HV
Sbjct: 3688 IDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGL----INY----HV 3739

Query: 166  VQVS--ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+V+  + +     V     V++ GD      GH + +     P  +E+L G    Q+  
Sbjct: 3740 VKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGH-NISESCKLPCKIESLSGKGIIQIDC 3798

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G  F+  L+  G ++T G   + +LGHG +     PK ++ L+    +VQ + G  ++LA
Sbjct: 3799 GSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQG-KKIVQFSTGSLHVLA 3857

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +G VY++G      LG G  H   +PR I     KG  + +VS G  H  A  S   
Sbjct: 3858 LTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAAL--KGKRIQQVSCGSAHSFAWASEEA 3915

Query: 344  VYT 346
             +T
Sbjct: 3916 CHT 3918



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 19/223 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD- 189
           V+S G +  G LGHG + +   +   I   S   VV VS  ++  A V + G+++  G  
Sbjct: 513 VYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWGKI 572

Query: 190 -NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG--LNFTGFLTIRGHVHTCGSNTHG 246
            +SS CC         + P LV+++      +V+ G  +N T  L+  G+V +       
Sbjct: 573 LHSSNCC---------YTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSFEYRNSD 623

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           + G  D      P  I    E+   V I         +     V+++G G+N  LGH   
Sbjct: 624 R-GCDDKSLNVIPSMIVFDYEI---VSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNS 679

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               +P+ ++     G  V  +S  D++++AL  +G VY WG+
Sbjct: 680 FRVNRPKEVKFL--SGKQVTSLSLADDYILALTDTGQVYCWGQ 720



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 30/236 (12%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASEN 173
            I  G  H+  I S+  +++ G    G LGH  E +Q        F    ++ QV+  S +
Sbjct: 2737 IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEF-VGKNITQVACGSRD 2795

Query: 174  HAAFVLQS-GQVFTCGDN---------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
                 L S G V++ GD          S  CC           P+ VE L G    Q+  
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCT----------PQKVERLVGHRVVQIEC 2845

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G  F+  LT  G V T G   + +LG   G+ + RPT   +    ++ ++  IA G  + 
Sbjct: 2846 GAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPT---LVNQLKLVTIDHIAVGTLHC 2902

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +AV+  G VY +G   +   G+G  +   +PR +  F    I + RV  G    +A
Sbjct: 2903 IAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFN--NIKINRVGCGSSQSIA 2956



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 45/206 (21%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVG 269
           + +  VP K V         +T +G V++ G N  G LGHG      PTP+ I    ++ 
Sbjct: 487 KQMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKL- 545

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCL------GHGEQH------------- 307
            VV ++ G  +  AVT +G +Y +G     SN C          E H             
Sbjct: 546 IVVMVSCGKDFCAAVTEDGKLYMWGKILHSSNCCYTPELVKSISEWHVSKVSCGSSINNT 605

Query: 308 ---------------------DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
                                D+     I +       +V +   ++    +D +  V+T
Sbjct: 606 LALSREGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFT 665

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
           WG+G    LGH +      P+ +  L
Sbjct: 666 WGRGNNNMLGHNNSFRVNRPKEVKFL 691



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           +LT++  VH   +  +     G      T K +    E   V  +    + +L VT +G 
Sbjct: 412 YLTLQRKVHEIKNKKNIVQYWGKQFYPETKKKVILTLERLHVESVVCSRNEILVVTTSGT 471

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++ F S S   L   E+            +   + +  V   DE  +A+   G VY+WG 
Sbjct: 472 LH-FISYSIDSLNFEEK------------QMMNVPMKSVDVYDETYLAVTQKGEVYSWGV 518

Query: 350 GYCGALGHGDEIDK-TLPEPLSSLKSHLAVQGLSVLAEVCPTIVQE 394
              GALGHG +      PEP+ +  S L V  +S   + C  + ++
Sbjct: 519 NEFGALGHGQKYSSFPTPEPIVAF-SKLIVVMVSCGKDFCAAVTED 563


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LG+G + +  +   RI+     H V  VS  
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIP-KRISGALEGHQVAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGF 230
             H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  
Sbjct: 193 TWHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAA 250

Query: 231 LT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +              G + T G     +LGHGD   R  P  +A L +     +IA G S
Sbjct: 251 VVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFCRIACGHS 309

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             + +T +G + S G+     LG+     +L P  ++     G HVV+V+ G  HV  L 
Sbjct: 310 LTVGLTTSGQILSMGNTVYGQLGNPRSDGKL-PCLVEDI--MGEHVVQVACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 NKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LG+G  +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASL 296



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 8/203 (3%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D 
Sbjct: 58  RSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDS 117

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L  + +V  +A G  +  AVT  G +Y++G G++    LG+G       P+ 
Sbjct: 118 VHPRLVESL-AICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKR 176

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSS 371
           I +   +G  V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS 
Sbjct: 177 I-SGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSG 235

Query: 372 LKSHLAVQGLSVLAEVCPTIVQE 394
           LK+     G+   A V   IV +
Sbjct: 236 LKTIAVACGVWHTAAVVEVIVTQ 258



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 11/133 (8%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++     + +  V+ G+ H  A+ ++G +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 364 TLPEPLS-SLKSH 375
            +P+ +S +L+ H
Sbjct: 172 WIPKRISGALEGH 184


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 9/250 (3%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           GR H+L ++++ +V + GS+  G LG G  T +    T +  P+   +  ++AS    A 
Sbjct: 150 GRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVT-VGLPAGTTITALAASTYSLAL 208

Query: 178 VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
              +G     G NS    G    T+R    P  V    G     + A  + +  LT  G 
Sbjct: 209 T-DTGAALAWGSNSRGQLGDGTTTDR--STPVTVSLPAGTTITALAASYDHSLALTDTGA 265

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GSN++GQLG G T +R TP ++  L    ++  +AAG S+ L +T  G V ++GS 
Sbjct: 266 VLAWGSNSNGQLGDGTTTNRSTPVTVG-LPAGTTITALAAGRSHTLVLTSAGAVLAWGSN 324

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           SN  LG G   D   P  +      G  +  ++AG  H +AL  +G V  WG    G LG
Sbjct: 325 SNGQLGDGTTTDRSTP--VTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382

Query: 357 HGDEIDKTLP 366
            G   D++ P
Sbjct: 383 DGTTTDRSTP 392



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 114/252 (45%), Gaps = 13/252 (5%)

Query: 119 GRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  H+L ++++ V  + GS+  G LG G  T +    T +  P+   +  ++A   H+  
Sbjct: 98  GGSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPVT-VGLPAGTTITALAAGRRHSLA 156

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIR 234
           +  +G V   G NS+   G   T       R      G+P       L  + +   LT  
Sbjct: 157 LTDTGAVLAWGSNSNGQLGDGTTTA-----RSTPVTVGLPAGTTITALAASTYSLALTDT 211

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G     GSN+ GQLG G T DR TP +++ L    ++  +AA   + LA+T  G V ++G
Sbjct: 212 GAALAWGSNSRGQLGDGTTTDRSTPVTVS-LPAGTTITALAASYDHSLALTDTGAVLAWG 270

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           S SN  LG G   +   P  +      G  +  ++AG  H + L S+G V  WG    G 
Sbjct: 271 SNSNGQLGDGTTTNRSTP--VTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQ 328

Query: 355 LGHGDEIDKTLP 366
           LG G   D++ P
Sbjct: 329 LGDGTTTDRSTP 340



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 7/219 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L    +  + GS+  G LG G  T +    T ++ P+   +  ++AS +H+  +  
Sbjct: 204 YSLALTDTGAALAWGSNSRGQLGDGTTTDRSTPVT-VSLPAGTTITALAASYDHSLALTD 262

Query: 181 SGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +G V   G NS+   G    TNR    P  V    G     + AG + T  LT  G V  
Sbjct: 263 TGAVLAWGSNSNGQLGDGTTTNR--STPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLA 320

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            GSN++GQLG G T DR TP ++  L    ++  +AAG  + LA+T  G V ++G  S  
Sbjct: 321 WGSNSNGQLGDGTTTDRSTPVTVG-LPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYG 379

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            LG G   D   P  +      G  +  + + D H +AL
Sbjct: 380 QLGDGTTTDRSTP--VTVGLPAGTTITVLVSMDNHGMAL 416



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 81/183 (44%), Gaps = 5/183 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V   GDN S   G   T      P  V    G     + AG + +  LT  G V   GSN
Sbjct: 59  VLAWGDNFSGQLGDGTTTA-RSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           + GQLG G T DR TP ++  L    ++  +AAG  + LA+T  G V ++GS SN  LG 
Sbjct: 118 SRGQLGDGTTTDRSTPVTVG-LPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGD 176

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       P  +      G  +  ++A   + +AL  +G    WG    G LG G   D+
Sbjct: 177 GTTTARSTP--VTVGLPAGTTITALAA-STYSLALTDTGAALAWGSNSRGQLGDGTTTDR 233

Query: 364 TLP 366
           + P
Sbjct: 234 STP 236


>gi|397627901|gb|EJK68660.1| hypothetical protein THAOC_10141, partial [Thalassiosira oceanica]
          Length = 447

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 39/256 (15%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            ++S+   F+ GS+  G LG G +T +      ++ P    V + +   N +A + + G 
Sbjct: 127 FILSDGRSFAVGSNKNGQLGVGSDTKETSKPVLLDLPP---VAKAALGNNFSALLTEGGD 183

Query: 184 VFTCG-----DNSSFCCGH-RDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRG 235
           ++TCG      N   C GH  DT RP   P LV +L   G   K V  G      LT  G
Sbjct: 184 IYTCGFGGSRMNGMGCLGHGDDTARP--APTLVNSLVEDGCYAKDVHVGEYSMTALTTEG 241

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSF 293
            V TCGS ++G+LG+ +T+D+     + P+E +G  ++ QIA G ++ LA++  GV+Y +
Sbjct: 242 EVLTCGSGSYGRLGNLETVDQ---LYLEPVELIGNDNISQIAGGSAFSLALSQEGVIYGW 298

Query: 294 GSGSNFCLGHGE------QHDELQPR---------AIQTF------RRKGIHVVRVSAGD 332
           G  +   LG G       Q   L PR         A++          +G  VV++SAG 
Sbjct: 299 GRNNEGQLGTGMGMSGECQPSLLVPRVCCCSNSVYAMEALPLPVEGNLEGKTVVKISAGK 358

Query: 333 EHVVALDSSGYVYTWG 348
            H  A+ S G ++TWG
Sbjct: 359 AHSAAVTSEGELFTWG 374



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 11/203 (5%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           + H+ ++    + +AF+L  G+ F  G N +   G     +   +P L++     P  + 
Sbjct: 112 SPHITRIDCGASGSAFILSDGRSFAVGSNKNGQLGVGSDTKETSKPVLLDL---PPVAKA 168

Query: 222 TAGLNFTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IA 275
             G NF+  LT  G ++TCG      N  G LGHGD   RP P  +  L E G   + + 
Sbjct: 169 ALGNNFSALLTEGGDIYTCGFGGSRMNGMGCLGHGDDTARPAPTLVNSLVEDGCYAKDVH 228

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G   M A+T  G V + GSGS   LG+ E  D+L    ++      I   +++ G    
Sbjct: 229 VGEYSMTALTTEGEVLTCGSGSYGRLGNLETVDQLYLEPVELIGNDNIS--QIAGGSAFS 286

Query: 336 VALDSSGYVYTWGKGYCGALGHG 358
           +AL   G +Y WG+   G LG G
Sbjct: 287 LALSQEGVIYGWGRNNEGQLGTG 309



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++  G + + F+   G     GSN +GQLG G DT +   P     L ++  V + A G 
Sbjct: 117 RIDCGASGSAFILSDGRSFAVGSNKNGQLGVGSDTKETSKPV----LLDLPPVAKAALGN 172

Query: 279 SYMLAVTGNGVVYSFGSGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++   +T  G +Y+ G G +      CLGHG+      P  + +    G +   V  G+ 
Sbjct: 173 NFSALLTEGGDIYTCGFGGSRMNGMGCLGHGDDTARPAPTLVNSLVEDGCYAKDVHVGEY 232

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            + AL + G V T G G  G LG+ + +D+   EP+
Sbjct: 233 SMTALTTEGEVLTCGSGSYGRLGNLETVDQLYLEPV 268


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 119/269 (44%), Gaps = 12/269 (4%)

Query: 110 SAGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           ++G   I  G  HT  L+S+  V   G +  G LG G  T +           A+ V  +
Sbjct: 117 TSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL--ASGVTAI 174

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +A ++H      SG V   GDN S   G    T+R    P  V  L G     + AG + 
Sbjct: 175 AAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRST--PVAVSGL-GSGVTAIAAGGSH 231

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A T +
Sbjct: 232 TCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS--GVTAIAAGGFHTCARTSS 289

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  +G+  +  LG G       P A+         V  ++AGD H  AL SSG V+ W
Sbjct: 290 GGVMCWGANWSGQLGDGTTTARSTPVAVSGLASG---VTAIAAGDSHTCALTSSGGVWCW 346

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           G  + G LG G   D++ P  +S L S +
Sbjct: 347 GYNFFGQLGDGTTTDRSTPVAVSGLGSGV 375



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 123/273 (45%), Gaps = 22/273 (8%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT   ++S    C G +  G LG G  T +          S   V  ++
Sbjct: 424 SGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIA 481

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTA--- 223
           A  +H   ++ SG V+  G NSS   G     D   P+       A+ G+P  +VTA   
Sbjct: 482 AGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPV-------AVSGLP-SEVTAIAS 533

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G+N  GQLG G T  R TP +++ L     V+ IAAG  +  A
Sbjct: 534 GGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPS--GVMAIAAGDLHTCA 591

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G V+ +G+ S+  LG G       P A+         V  ++AG  H  AL SSG 
Sbjct: 592 LTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSG---VTAIAAGSFHTCALTSSGG 648

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           V+ WG  + G LG G   D + P  +S L S +
Sbjct: 649 VWCWGANWSGQLGDGSYTDSSTPVAVSGLPSGV 681



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 127/292 (43%), Gaps = 14/292 (4%)

Query: 89  NWKRVLRFLQSVEHSSDIVET--SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHG 145
           NW   L    + + S+ +  +  ++G   I  G +HT   ++S    C G++  G LG G
Sbjct: 247 NWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDG 306

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPI 204
             T +           A+ V  ++A ++H   +  SG V+  G N     G    T+R  
Sbjct: 307 TTTARSTPVAVSGL--ASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRST 364

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
             P  V  L G     + AG   T  L   G V   G N  GQLG G T  R TP +++ 
Sbjct: 365 --PVAVSGL-GSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSG 421

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  V  V  IAAG  +  A T +G V  +G   +  LG G   D   P A+      G  
Sbjct: 422 L--VSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL---GSG 476

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           V  ++AG  H  AL SSG V+ WG+   G LG G   D+  P  +S L S +
Sbjct: 477 VTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEV 528



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 123/294 (41%), Gaps = 18/294 (6%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGN--MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHG 145
           NW   L    + + S+ +  +  G+    I  G  HT  L+S+  V+  G +  G LG G
Sbjct: 196 NWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDG 255

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NR 202
             T +           A+ V  ++A   H      SG V   G N S   G   T   + 
Sbjct: 256 TTTDRSTPVAVSGL--ASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARST 313

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P+    L   +       + AG + T  LT  G V   G N  GQLG G T DR TP ++
Sbjct: 314 PVAVSGLASGVT-----AIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAV 368

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           + L     V  IAAG  +  A+  +G V  +G   +  LG G       P A+       
Sbjct: 369 SGLGS--GVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSG- 425

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
             V  ++AGD+H  A  SSG V  WG  + G LG G   D++ P  +S L S +
Sbjct: 426 --VTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV 477



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 124/293 (42%), Gaps = 16/293 (5%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGN--MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHG 145
           NW   L    + + S+ +  +  G+    I  G  HT  L+S+  V+  G +  G LG G
Sbjct: 451 NWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDG 510

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T +         PS   V  +++   H   +  SG V   G N S   G         
Sbjct: 511 TTTDRGTPVAVSGLPS--EVTAIASGGVHTCALTSSGGVMCWGANWS---GQLGDGTTTA 565

Query: 206 RPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           R   V A+ G+P     + AG   T  LT  G V   G+N+ GQLG G T  R TP +++
Sbjct: 566 RSTPV-AVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVS 624

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L     V  IAAG  +  A+T +G V+ +G+  +  LG G   D   P A+        
Sbjct: 625 GLPS--GVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPSG-- 680

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            V  ++AG  H  A   SG V+ W     G LG G   D + P  +S L S +
Sbjct: 681 -VTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSGV 732



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 79/164 (48%), Gaps = 7/164 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T  LT  G V   G N  GQLG G T DR TP +++ L     V 
Sbjct: 66  LQGV--TAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTS--GVT 121

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG ++  A+  +G V  +G   +  LG G   D   P A+         V  ++AGD
Sbjct: 122 AIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASG---VTAIAAGD 178

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           +H  A  SSG V  WG  + G LG G   D++ P  +S L S +
Sbjct: 179 DHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV 222



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 106/246 (43%), Gaps = 14/246 (5%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I +G  HT  L S+  V   G++  G LG G  T +         PS   V+ ++A + H
Sbjct: 531 IASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSG--VMAIAAGDLH 588

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFLT 232
              +  SG V+  G NSS   G         R   V A+ G+P     + AG   T  LT
Sbjct: 589 TCALTSSGGVWCWGANSS---GQLGDGTTTARSTPV-AVSGLPSGVTAIAAGSFHTCALT 644

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G+N  GQLG G   D  TP +++ L     V  IAAG  +  A TG+G V+ 
Sbjct: 645 SSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPS--GVTAIAAGRFHTCARTGSGGVWC 702

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           + S     LG G   D   P A+         V  ++AG  H  A  SSG V  WG    
Sbjct: 703 WASNRYGQLGDGSYTDSSTPVAVSGLVSG---VTAIAAGVVHTCARTSSGGVMCWGANSS 759

Query: 353 GALGHG 358
           G LG G
Sbjct: 760 GQLGDG 765



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G +HT  L S+  V+  G++  G LG G  T           PS   V  ++
Sbjct: 628 SGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPSG--VTAIA 685

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           A   H      SG V+    N     G   + D++ P+    LV  +       + AG+ 
Sbjct: 686 AGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSGVT-----AIAAGVV 740

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
            T   T  G V   G+N+ GQLG G  L R
Sbjct: 741 HTCARTSSGGVMCWGANSSGQLGDGRLLYR 770


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 15/265 (5%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF-TRIN-FPSAAHVVQVSA 170
            ++++ G  H  +I++   +++ GS+  G LGHG E  + +S   R++ F   + +  V  
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
               H   V  +  V++ G +     GH        RP+++E L G   + + AG      
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------PLEEVGSVVQIAAGPSYML 282
            L   G + + G    GQLG G    +  P  I            + G + QIA G  + +
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              + NG VYS+G G    LGH    +  +PR I+T R     V ++S G  H VA     
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLR----GVTKISCGHFHTVATTDLK 1360

Query: 343  YVYTWGKGYCGALGHGDEIDKTLPE 367
             VY+WG G    LGH  + D+++P+
Sbjct: 1361 NVYSWGSGEHMKLGHSSDKDESVPK 1385



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 46/297 (15%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            +  G  HT+ + SN  V+S GS   G LGHG   T+ V+ +R   I   +   +  ++A 
Sbjct: 1182 VECGGEHTIAVDSNYFVYSWGSDKFGQLGHG---TKAVNQSRPKVIEELTGQKIQAIAAG 1238

Query: 172  ENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGV------PCKQVTA 223
              H   + +SG++F+ G  D      G   +     R  +   + G+         Q+  
Sbjct: 1239 FAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIAC 1298

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G   +   +  G V++ G    GQLGH    +   P+ I   E +  V +I+ G  + +A
Sbjct: 1299 GFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLI---ETLRGVTKISCGHFHTVA 1355

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
             T    VYS+GSG +  LGH    DE  P+ +  F +K  +V +V  G  H + +     
Sbjct: 1356 TTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK--NVSKVVCGQNHTMTITFPDD 1413

Query: 339  ----------------DSSGYVYTWGKGYCGALGHGDEI-----DKTLPEPLSSLKS 374
                             SS  +Y WG    G LG G ++     DK +P  +  + S
Sbjct: 1414 LNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNS 1470



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 44/302 (14%)

Query: 106  IVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-- 161
            I E +   +Q I  G  H +++  S  +FS G    G LG G   ++ +  TRI   +  
Sbjct: 1224 IEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIP-TRIEINAIM 1282

Query: 162  -------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
                      + Q++    H+    ++G+V++ G       GH+     I +PRL+E L+
Sbjct: 1283 GGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHK-VFENISKPRLIETLR 1341

Query: 215  GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
            GV   +++ G   T   T   +V++ GS  H +LGH    D   PK +    +  +V ++
Sbjct: 1342 GV--TKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQ-KNVSKV 1398

Query: 275  AAGPSYMLAVT---------------------GNGVVYSFGSGSNFCLGHGEQ-----HD 308
              G ++ + +T                      +  +Y++GS  +  LG G        D
Sbjct: 1399 VCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFD 1458

Query: 309  ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            +  P AI+      ++++ +S G +    + S+  +Y WG G  G +G+G   D  +P  
Sbjct: 1459 KPIPTAIKGV--NSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTR 1516

Query: 369  LS 370
            +S
Sbjct: 1517 IS 1518



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/114 (32%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 262  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ-PRAIQTFR 319
            +APL+     ++++ G  ++  +T +G +Y++GS  +  LGHG E +  L  P+ +  FR
Sbjct: 1115 MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR 1174

Query: 320  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSL 372
             K   +  V  G EH +A+DS+ +VY+WG    G LGHG + ++++ P+ +  L
Sbjct: 1175 GKS-PIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEEL 1227


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 11/236 (4%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
           N      ++Q++  + H+  + + G++F  G N     G          P++VE L GVP
Sbjct: 133 NVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             Q++AG   +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDN-QKVEFVACG 251

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+   +T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLA 309

Query: 338 LDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
             S  G V+++G G  G LG+G   D+ +P P+         L+SH + + L ++A
Sbjct: 310 YVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIA 365



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---YPSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375

Query: 349 K 349
           K
Sbjct: 376 K 376


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 25/271 (9%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQ----CVSFTRINFPSAAHVVQV 168
           + I  G  HTL+ +    V+S G  + G LG G    Q     +  +     + + ++QV
Sbjct: 173 ISIACGANHTLVCTERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQV 232

Query: 169 SASENHAAFVLQSGQVFTCGDNSS--FCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGL 225
           SA    +A + QSG+V+TCG N +     G RD  N PI   +  E +  + C Q+   +
Sbjct: 233 SAGMRFSAILDQSGRVYTCGQNDAGQLGIGGRDQENIPISIKKFPERVSMIACGQMHLLM 292

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                LT +G V++CG+N+ GQLG  +  +  +P  I  +  +         P   +A  
Sbjct: 293 -----LTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHI---------PMRYVAAG 338

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
                 S+ SG  +  G G   + L P  ++T   KG+  V VS G+   +A++  G VY
Sbjct: 339 SFSASISYDSGDLYLWGSGVFGEFLTPHRVKTI--KGM-TVSVSIGNHFGIAVNQDGIVY 395

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           +WG    G LG GD  ++  P+ ++ L   +
Sbjct: 396 SWGHNNSGELGQGDFDERPTPQIINQLNDKI 426


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 10/260 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +H+++IS+   V++CG    G LGH        SF  ++  ++  V QV A+ NH
Sbjct: 106 VVCGYFHSMVISSKGQVYTCGRGYKGFLGH-KNQNNIRSFLLVDALASLKVTQVCAARNH 164

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  V   GQV++ G       GH D     +R  P ++E L+G    Q T        LT
Sbjct: 165 SLVVTSDGQVYSFGFPKHGRLGHGDD---AYRRLPTMIEGLRGKKVVQTTCFGAHNAVLT 221

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   GS T G+LG GD      P  +  LE  G +  I  G  +  A+   G +++
Sbjct: 222 DAGQVFMWGSGTDGKLGQGDNESHFAPVLVRALEGKG-IKSIQCGYDFAAAINVEGHLFT 280

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LGHG++ +   P  +       I  +   AG  H+ A+     +YTWGK   
Sbjct: 281 WGHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAG--HMAAISDMNVLYTWGKNAE 338

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LGHGD  D+  P  +++L
Sbjct: 339 GQLGHGDRHDRHGPTVVATL 358



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 114/236 (48%), Gaps = 13/236 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+   R H+L++ S+  V+S G    G LGHG +  + +  T I       VVQ +    
Sbjct: 157 QVCAARNHSLVVTSDGQVYSFGFPKHGRLGHGDDAYRRLP-TMIEGLRGKKVVQTTCFGA 215

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +  +GQVF  G  +    G  D N   F P LV AL+G   K +  G +F   + +
Sbjct: 216 HNAVLTDAGQVFMWGSGTDGKLGQGD-NESHFAPVLVRALEGKGIKSIQCGYDFAAAINV 274

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            GH+ T G    G+LGHGD  +R  P  +  L EV  +  IA G  +M A++   V+Y++
Sbjct: 275 EGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEV-PIRAIACGAGHMAAISDMNVLYTW 333

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVRVSAGDEHVVALDSS 341
           G  +   LGHG++HD   P  + T           +G  V +VS G  H  +L S+
Sbjct: 334 GKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG-RVAKVSCGANHTASLVSA 388



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 121/252 (48%), Gaps = 15/252 (5%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN-----HAAFVLQ 180
           IS  S+   GS+  G LGHG E      +       + H   + A        H+  +  
Sbjct: 65  ISTISLGGLGST--GRLGHGDER----KYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISS 118

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            GQV+TCG       GH++ N  I    LV+AL  +   QV A  N +  +T  G V++ 
Sbjct: 119 KGQVYTCGRGYKGFLGHKNQNN-IRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSF 177

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G   HG+LGHGD   R  P  I  L     VVQ     ++   +T  G V+ +GSG++  
Sbjct: 178 GFPKHGRLGHGDDAYRRLPTMIEGLRGK-KVVQTTCFGAHNAVLTDAGQVFMWGSGTDGK 236

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G+      P  ++    KGI  ++   G +   A++  G+++TWG G  G LGHGDE
Sbjct: 237 LGQGDNESHFAPVLVRALEGKGIKSIQC--GYDFAAAINVEGHLFTWGHGLGGRLGHGDE 294

Query: 361 IDKTLPEPLSSL 372
            ++T+P  +++L
Sbjct: 295 ENRTVPSLVTAL 306



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 10/182 (5%)

Query: 196 GHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
           GH D  R    P LV++L  +G+  K V  G   +  ++ +G V+TCG    G LGH   
Sbjct: 80  GHGD-ERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKGFLGH--- 135

Query: 254 LDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            ++   +S   ++ + S  V Q+ A  ++ L VT +G VYSFG   +  LGHG+      
Sbjct: 136 KNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHGDDAYRRL 195

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P  I+  R  G  VV+ +    H   L  +G V+ WG G  G LG GD      P  + +
Sbjct: 196 PTMIEGLR--GKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNESHFAPVLVRA 253

Query: 372 LK 373
           L+
Sbjct: 254 LE 255



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           G  + G+LGHGD      P  +  L + G     +  G  + + ++  G VY+ G G   
Sbjct: 72  GLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKG 131

Query: 300 CLGHGEQHDELQPRAIQTF----RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            LGH  Q++      I++F        + V +V A   H + + S G VY++G    G L
Sbjct: 132 FLGHKNQNN------IRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRL 185

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQ 379
           GHGD+  + LP  +  L+    VQ
Sbjct: 186 GHGDDAYRRLPTMIEGLRGKKVVQ 209



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 11/97 (11%)

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G GS   LGHG++     P  +Q+  ++GI    V  G  H + + S G VYT G+GY G
Sbjct: 72  GLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKG 131

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL--AEVC 388
            LGH ++         ++++S L V  L+ L   +VC
Sbjct: 132 FLGHKNQ---------NNIRSFLLVDALASLKVTQVC 159


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 18/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 337
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 338 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITAL 529



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 116/267 (43%), Gaps = 20/267 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           I  G YH+  +++S     +  G+   G+LGH  E +  +            V  VS   
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGP 424

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A +  +G++FT GD +    GH D +  I  PR VE   G+   +V  G+  T  + 
Sbjct: 425 WHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNGLKTLKVACGVWHTAAVV 483

Query: 232 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P+ I  L +  S  ++A   +
Sbjct: 484 ELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVD-KSFSEVACSYA 542

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G VY+ GS     LG     + + P  ++ +      V  +S G  HV  L 
Sbjct: 543 MTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDST-VEEISCGSHHVAVLT 600

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           S   VYTWGKG  G LGHGD  +K  P
Sbjct: 601 SRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 5/134 (3%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D  TPKS+     V  V  I+ G  + + VT  G  +S+G  +   LGHG + D  
Sbjct: 291 GTRIDANTPKSLES-SVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS 349

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEP 368
            P+ I+ F  KG++V  ++ G+ H  A+ SSG +YTWG G    G LGH  E    +P+ 
Sbjct: 350 HPKLIKNF--KGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKK 407

Query: 369 LSSLKSHLAVQGLS 382
           +  L   L V  +S
Sbjct: 408 VCGLMEGLRVSHVS 421


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 18/223 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 337
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 338 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITAL 529



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 21/284 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I      N++ I  G YH+  +++S     +  G+   G+LGH  E +  +   
Sbjct: 348 VSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKK 407

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    V  VS    H A +  +G++FT GD +    GH D +  I  PR VE   G
Sbjct: 408 VCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNG 466

Query: 216 VPCKQVTAGLNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +   +V  G+  T  +                G + T G    G+LGHGD   R  P+ I
Sbjct: 467 LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCI 526

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L +  S  ++A   +  +A+T  G VY+ GS     LG     + + P  ++ +    
Sbjct: 527 TALVD-KSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDS 584

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             V  +S G  HV  L S   VYTWGKG  G LGHGD  +K  P
Sbjct: 585 T-VEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 5/134 (3%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D  TPKS+     V  V  I+ G  + + VT  G  +S+G  +   LGHG + D  
Sbjct: 291 GTRIDANTPKSLES-SVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS 349

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEP 368
            P+ I+ F  KG++V  ++ G+ H  A+ SSG +YTWG G    G LGH  E    +P+ 
Sbjct: 350 HPKLIKNF--KGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKK 407

Query: 369 LSSLKSHLAVQGLS 382
           +  L   L V  +S
Sbjct: 408 VCGLMEGLRVSHVS 421


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 21/253 (8%)

Query: 121  YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVL 179
            +   L S+ S++S G +  G LG    +    +   ++  P+    VQ SA  +H   + 
Sbjct: 772  FSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALS 831

Query: 180  QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              G ++T GDNS+   G   T N P  +P   +    V    V+AG   T  +  +G V+
Sbjct: 832  SDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVY 891

Query: 239  TCGSNTHGQLGHGDT---LDRP----TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            T G NTHG+LG   T    D+P    TP  I       +  Q +AG S+ +AV+ +G +Y
Sbjct: 892  TWGDNTHGELGRSTTSTPADKPGKADTPAGI-------TFTQASAGESHSVAVSDDGSIY 944

Query: 292  SFGSGSNFCLGHGEQHDELQP--RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            ++G  +N  LG   +   + P  +  +     G+   + SAG +H +AL S G +YTWG 
Sbjct: 945  TWGDTANGRLG---RDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGD 1001

Query: 350  GYCGALGHGDEID 362
                + G  +++D
Sbjct: 1002 SGKTSAGRPNKVD 1014



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 9/219 (4%)

Query: 144 HGPETT-QCVSFTRINFPSAAHVVQVSASEN---HAAFVLQSGQVFTCGDNSSFCCGHRD 199
           +GPE+  Q V+ T    P  A  +++S ++    H+A V   G ++T GDNS    G   
Sbjct: 689 NGPESGGQTVTLT----PPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDT 744

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
            ++P   P   EA  GV    V+AG  F+  L   G +++ G N+ GQLG   T + P  
Sbjct: 745 ADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPAN 804

Query: 260 KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           +        G + VQ +AG S+++A++ +G +Y++G  S   LG     +    +  +  
Sbjct: 805 RPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKAD 864

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               +    VSAG  H VA+D+ G VYTWG    G LG 
Sbjct: 865 TPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGR 903



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 112/251 (44%), Gaps = 6/251 (2%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H+  + S+ S+++ G +  G LG           ++   P+    V VSA   
Sbjct: 712 QADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYG 771

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            +  +   G +++ GDNS    G   T N P  RP  VEA  G+   Q +AG +    L+
Sbjct: 772 FSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALS 831

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G+++T G N+ GQLG   T + P  K   A      +   ++AG  + +AV   G VY
Sbjct: 832 SDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVY 891

Query: 292 SFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           ++G  ++  LG         +P    T    GI   + SAG+ H VA+   G +YTWG  
Sbjct: 892 TWGDNTHGELGRSTTSTPADKPGKADT--PAGITFTQASAGESHSVAVSDDGSIYTWGDT 949

Query: 351 YCGALGHGDEI 361
             G LG    I
Sbjct: 950 ANGRLGRDTNI 960



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 16/256 (6%)

Query: 107  VETSAG--NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA 162
            VE  AG   +Q + G  H + L S+ ++++ G +  G LG    +        + + P+ 
Sbjct: 809  VEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPAD 868

Query: 163  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
                 VSA + H   V   G V+T GDN+    G   T+ P  +P   +   G+   Q +
Sbjct: 869  VTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQAS 928

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYM 281
            AG + +  ++  G ++T G   +G+LG  DT   P  K        G +  Q +AG  + 
Sbjct: 929  AGESHSVAVSDDGSIYTWGDTANGRLGR-DTNITPADKPGKADTPAGVTFTQASAGGKHS 987

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+  +G +Y++G       G        +P  + T    GI   + SAG  + +AL S 
Sbjct: 988  IALGSDGSLYTWGDSGKTSAG--------RPNKVDT--PAGITFTQASAGASYCLALGSD 1037

Query: 342  GYVYTWGKGYCGALGH 357
            G +Y+WG    G LG 
Sbjct: 1038 GNLYSWGDNAKGQLGR 1053



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 13/213 (6%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRL 209
           +N P+  H  QVS    H   +   G +++ G+N+    G        +D  +   +P+L
Sbjct: 212 VNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKL 271

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEE 267
           V    GV   Q  AG   +  L   G++++ G N +G+LG   G  +    P  +   + 
Sbjct: 272 VTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKG 331

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIH 324
           +  + QI+AG  Y +A+  +G +YS+G  +   LG    G    +  PR + T       
Sbjct: 332 ITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKM-TMPAGVKK 390

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              + AG+   +A  S G +Y+WG    G LG 
Sbjct: 391 FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGR 423



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 19/257 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQC---VSFTRINFPSA-AHVVQVS 169
           Q   G++H+L L S+ +++S G +  G LG   +T      V   ++N P     + Q+S
Sbjct: 282 QACAGKWHSLALGSDGNLYSWGENKYGELGR--DTGSAIYDVKPGKVNLPKGITKITQIS 339

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLN 226
           A   ++  +   G +++ GDN+    G      P FR   PR +    GV          
Sbjct: 340 AGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYP-FRDRSPRKMTMPAGVKKFTWIKAGE 398

Query: 227 FTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLA 283
           +T   T   G +++ G N +GQLG      R   TP+ +     V    +++A   + LA
Sbjct: 399 WTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLA 458

Query: 284 VTGNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDS 340
           +  +G +YS+G      LG   G    +++P  + T    G+     VSAG  H +A+ S
Sbjct: 459 LGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPT--PAGVAQFTEVSAGYSHSLAIGS 516

Query: 341 SGYVYTWGKGYCGALGH 357
            G +Y+WG+   G LG 
Sbjct: 517 DGNLYSWGQNKYGELGR 533



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 28/231 (12%)

Query: 146 PETTQCVSFTRINF-PSAAHVVQ----VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           P + +   +TRI   P     ++    V A E  +  +   G ++  GDN+       D 
Sbjct: 146 PTSGKATEYTRITLTPPTTPDIRFSHIVPAKEEGSQAIASDGNLYRWGDNNYKLGTPEDE 205

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTL---- 254
            R    P LV    GV   QV+ G  +T FL I   G++++ G+N  G+LG  +T+    
Sbjct: 206 KR---TPSLVNPPTGVHFTQVSTG--YTHFLAIGSDGNLYSWGNNADGELGR-ETVSTTP 259

Query: 255 -DRP----TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQH 307
            D P     PK + P   V    Q  AG  + LA+  +G +YS+G      LG   G   
Sbjct: 260 KDNPQIDNQPKLVTPPAGV-HFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAI 318

Query: 308 DELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            +++P  +     KGI  + ++SAG  + +ALDS G +Y+WG      LG 
Sbjct: 319 YDVKPGKVNL--PKGITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGR 367


>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
 gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
          Length = 526

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 116/261 (44%), Gaps = 39/261 (14%)

Query: 131 VFSCGSSLCGVLGHGPET-------TQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSG 182
           V SCG+   G LGHG +            +F R+   P    VV  SA  +H A V   G
Sbjct: 117 VVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTADG 176

Query: 183 QVFTCGDNSSFCCGH-RDTNR-PIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIRGH 236
            V+TCG N     GH  D    PI RP     + G+P       V+AG + T  +T  G 
Sbjct: 177 AVYTCGLNEHGQLGHSHDAGYVPILRP-----VSGLPQHDRVVAVSAGHHHTVCVTEGGE 231

Query: 237 VHTCGSNTHGQ--LGHGDTLDRPTPKSI------APLEEVGSVVQIAAGPSYMLAVTGNG 288
           +   G N   Q  LG G     P P  I      AP    G+V+ +AAGP + LAVT  G
Sbjct: 232 LWAWGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNH-GAVMSVAAGPRHNLAVTDRG 290

Query: 289 VVYSFGSGSNFCLGHGEQHD-----------ELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++G G    LGHG               E  PR +++    GI V   +AG  H V 
Sbjct: 291 AVYTWGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVC 350

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           +D +G+V+ WG+G    LG G
Sbjct: 351 VDRTGHVHAWGQGRFNQLGVG 371



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 38/297 (12%)

Query: 93  VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCG---SSLCGVLGHGPET 148
           +LR +  +     +V  SAG+       +HT+ ++    +++ G   +S CG+    P  
Sbjct: 200 ILRPVSGLPQHDRVVAVSAGH-------HHTVCVTEGGELWAWGRNDASQCGLGSGAPSV 252

Query: 149 TQCVSFTRINFPSA----AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH------- 197
               ++     P A      V+ V+A   H   V   G V+T GD      GH       
Sbjct: 253 VPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWR 312

Query: 198 -----RDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                RDT  P   PRLV +L   G+      AGL  +  +   GHVH  G     QLG 
Sbjct: 313 WGFWGRDTTEPA--PRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGV 370

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G             +  +G V  +AAG ++ +AV  +G + S+G+  N  LG G  +D+ 
Sbjct: 371 GAKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSNDKR 430

Query: 311 Q--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKT 364
              PR +             SAG  H  A  S G ++TW  G+ G++G HG + D T
Sbjct: 431 GDVPRLVHN--PNAASFASASAGWRHAAATSSDGRLWTW--GWSGSVGQHGVDADST 483



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 37/292 (12%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +  +    D+V  SAG      G +  ++ ++ +V++CG +  G LGH  +         
Sbjct: 150 MTGIPQGLDVVSASAG------GSHTAVVTADGAVYTCGLNEHGQLGHSHDAGYVPILRP 203

Query: 157 IN-FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEA 212
           ++  P    VV VSA  +H   V + G+++  G N +  CG   +  P   P    +  A
Sbjct: 204 VSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCG-LGSGAPSVVPLPAWISSA 262

Query: 213 LKGVPCKQ-----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG------------DTLD 255
             G P        V AG      +T RG V+T G    G LGHG            DT +
Sbjct: 263 SPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWRWGFWGRDTTE 322

Query: 256 RPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL---Q 311
            P P+ +  L + G  V   AAG  + + V   G V+++G G    LG G ++      +
Sbjct: 323 -PAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVGAKNAPAFTTE 381

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           P  +    R    V  ++AG    VA+ + G + +WG    G LG G+  DK
Sbjct: 382 PTRVPALGR----VRDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSNDK 429



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 23/156 (14%)

Query: 230 FLTIRG---HVHTCGSNTHGQLGHGDT--------LDRPTPKSIAPLEEVGSVVQIAAGP 278
           + T RG    V +CG+   G+LGHG          +   T + +  + +   VV  +AG 
Sbjct: 107 WSTTRGVATRVVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGG 166

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-----LQP-RAIQTFRRKGIHVVRVSAGD 332
           S+   VT +G VY+ G   +  LGH   HD      L+P   +    R    VV VSAG 
Sbjct: 167 SHTAVVTADGAVYTCGLNEHGQLGH--SHDAGYVPILRPVSGLPQHDR----VVAVSAGH 220

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            H V +   G ++ WG+      G G      +P P
Sbjct: 221 HHTVCVTEGGELWAWGRNDASQCGLGSGAPSVVPLP 256


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 14/258 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+ L  + ++++ G++  G LG G   T  V FT +       V  ++A   +     Q
Sbjct: 332 HTVALRQDGTLWAWGNNSSGQLGDG---TTTVRFTPVQVQGLTGVTAIAAGYLYTVASKQ 388

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  GDN     G   T R +  P  V+ L GV    + AG  +T      G V   
Sbjct: 389 DGTVWAWGDNEWGQLGDGTTTRRL-TPVQVQGLTGVTA--IAAGYLYTVASKQDGTVWAW 445

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N   QLG G    R TP  +  LE    +  IAA     +AV  +G V+++G  +   
Sbjct: 446 GDNKRSQLGEGAVSQRHTPGEVQGLE---GITAIAASNLLTVAVRQDGTVWAWGDNARGQ 502

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G     L P  +Q        V  V+A D H+VA+   G V+ WG G+ G LG G  
Sbjct: 503 LGDGTTTRRLTPVQVQGL----AGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTG 558

Query: 361 IDKTLPEPLSSLKSHLAV 378
           +D++ P  +  L    A+
Sbjct: 559 MDRSTPVQVQGLTGVTAI 576



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 141/350 (40%), Gaps = 38/350 (10%)

Query: 45   SHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLN---RCNGNWKRVLRFLQSVE 101
            S+ L P + + L+ + A      H   AG    +    LN   +  G         QS+ 
Sbjct: 963  SYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG-----PLSQSLT 1017

Query: 102  HSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
                 V+   G   I  G  HTL +  + +V+S G +  G LG G   T   S T +   
Sbjct: 1018 PVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDG---TTAQSLTPVQVQ 1074

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKG 215
                V  +SA + H   + + G V+  G NS    G     HR T      P  V+ L G
Sbjct: 1075 GLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRAT------PVQVQGLTG 1128

Query: 216  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            V    + AG   T  L   G V   G N+ GQLG G T  R TP  +  L     V+ IA
Sbjct: 1129 VIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIA 1183

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            AG  + +A+  +G V+++G      LG G     L P  +Q        V  ++AG  H 
Sbjct: 1184 AGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGL----TGVTTIAAGYFHT 1239

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
             A+   G  +TWG    G LG G   D+  P  +  L       G+S LA
Sbjct: 1240 AAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLT------GVSALA 1283



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 140/332 (42%), Gaps = 22/332 (6%)

Query: 45   SHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVE 101
            S+ L P + + L+D+ A      H   AG    +    LN     G      R L   V+
Sbjct: 913  SYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQ 972

Query: 102  HSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
                +   +AG        YH      + ++++ G +  G LG GP  +Q ++  ++   
Sbjct: 973  GLMSVTAMAAGG-------YHMAAAGQDGTLWTWGLNSYGQLGGGP-LSQSLTPVQVQVQ 1024

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                V  ++A  +H   V Q G V++ G N+    G   T + +  P  V+ L GV    
Sbjct: 1025 GLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSL-TPVQVQGLTGVTA-- 1081

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            ++AG   T  L   G V   G N+ GQLG G T  R TP  +  L     V+ IAAG  +
Sbjct: 1082 ISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIAAGSLH 1138

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             +A+  +G V+++G  S   LG G       P  +Q        V+ ++AG  H VAL  
Sbjct: 1139 TVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL----TGVIAIAAGSLHTVALRQ 1194

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             G V+ WG    G LG G    +  P  +  L
Sbjct: 1195 DGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGL 1226



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 118/258 (45%), Gaps = 16/258 (6%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL +  + +V++ G++  G LG G  T +   F+ +   + A  +  +A   H     Q
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRR---FSPVQVMTGATAI--AAGIYHTVAASQ 138

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+T G NSS   G   T+   F P  V+ L GV    V AG N +  L   G V T 
Sbjct: 139 DGTVWTWGRNSSGQLGD-GTSIQRFSPVQVQGLTGVTA--VAAGRNHSAALGQGGTVWTW 195

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G +  R TP  +  L     V+ I+A  S  +A+  +G V+++G+ S+  
Sbjct: 196 GDNLVGQLGDGTSTQRLTPVQVQGLT---GVIAISANDSETVALRQDGTVWAWGNNSSGQ 252

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G       P  +Q     G  V  ++AG    VAL   G ++ WG    G LG+G  
Sbjct: 253 LGDGTTTVRFTP--VQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTT 308

Query: 361 IDKTLPEPLSSLKSHLAV 378
                PE +  L    A+
Sbjct: 309 FGSYRPEQVQGLTGVTAI 326



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 16/267 (5%)

Query: 107  VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            V+   G + I  G  HT+ L  + +V++ G +  G LG G  T +    T +       V
Sbjct: 1123 VQGLTGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRA---TPVQVQGLTGV 1179

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            + ++A   H   + Q G V+  G N     G   T R +  P  V+ L GV    + AG 
Sbjct: 1180 IAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRL-TPAQVQGLTGVTT--IAAGY 1236

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              T  +   G   T G N  GQLG G   DR TP  +  L  V +   +AAG ++ + V 
Sbjct: 1237 FHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGVSA---LAAGYAHTVVVG 1293

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +G V+++G+ S   LG+G   D   P  ++           ++AG  H VA+   G  +
Sbjct: 1294 EDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEAL----TGAFSLAAGRFHTVAMSPDGAGW 1349

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSL 372
             WG+   G +G G   D+  P P++ +
Sbjct: 1350 GWGRNNLGQVGDGTTADR--PTPVNVM 1374



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 141/334 (42%), Gaps = 28/334 (8%)

Query: 52   KFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVEHSSDIVE 108
            + + L+D+ A      H   AG    +    LN     G      R L   V+   D+  
Sbjct: 870  QVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMDVTA 929

Query: 109  TSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
             +AG        YH      + ++++ G +  G LG GP + + +    +       V  
Sbjct: 930  MAAGG-------YHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP---VQVQGLMSVTA 979

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL-VEALKGVPCKQVTAGLN 226
            ++A   H A   Q G ++T G NS    G    ++ +   ++ V+ L GV    + AG +
Sbjct: 980  MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAA--IAAGFS 1037

Query: 227  FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             T  L +R  G V + G N +GQLG G T    TP  +  L     V  I+AG ++ +A+
Sbjct: 1038 HT--LAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLT---GVTAISAGDAHTVAL 1092

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              +G V+++G  S   LG G       P  +Q        V+ ++AG  H VAL   G V
Sbjct: 1093 RRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL----TGVIAIAAGSLHTVALRQDGTV 1148

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            + WG+   G LG G    +  P  +  L   +A+
Sbjct: 1149 WAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAI 1182



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 13/260 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  + +V++ G++  G LG G   T  V FT +       V  ++A    A  + Q G +
Sbjct: 236 LRQDGTVWAWGNNSSGQLGDG---TTTVRFTPVQVLGLTGVTAIAAGGGFAVALRQDGTL 292

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G NS    G+  T    +RP  V+ L GV    + A    T  L   G +   G+N+
Sbjct: 293 WAWGSNSRGQLGN-GTTFGSYRPEQVQGLTGVTA--IAASGIHTVALRQDGTLWAWGNNS 349

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            GQLG G T  R TP  +  L     V  IAAG  Y +A   +G V+++G      LG G
Sbjct: 350 SGQLGDGTTTVRFTPVQVQGLT---GVTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDG 406

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                L P  +Q        V  ++AG  + VA    G V+ WG      LG G    + 
Sbjct: 407 TTTRRLTPVQVQGL----TGVTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRH 462

Query: 365 LPEPLSSLKSHLAVQGLSVL 384
            P  +  L+   A+   ++L
Sbjct: 463 TPGEVQGLEGITAIAASNLL 482



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 114/272 (41%), Gaps = 18/272 (6%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G +  G LG G  T +    T +     A V  V+AS+ H   V Q G V+  
Sbjct: 489 DGTVWAWGDNARGQLGDGTTTRR---LTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAW 545

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G       G   T      P  V+ L GV    + AG N T  L   G V   G N +GQ
Sbjct: 546 GVGFWGQLGD-GTGMDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQ 602

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LG G T    TP  +     V   V IAAG S+ +A+  +G V+++G      LG G   
Sbjct: 603 LGDGTTAGHLTPVQV---PGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTT 659

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P  +Q        V+ ++  + H VA+   G V+TWG    G LG     D T  +
Sbjct: 660 HRHSPVQVQGL----ADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLG-----DGTTTQ 710

Query: 368 PLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSC 399
            L+ ++ H      ++L     T+     R+ 
Sbjct: 711 RLTPVQVHGLTDATAILTSSSQTVAMRQDRTL 742



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 95/220 (43%), Gaps = 12/220 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F + A  V  + + NH   V Q G V+  G+N     G   T R  F P  V+ + G   
Sbjct: 69  FAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRR-FSP--VQVMTGATA 125

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             + AG+  T   +  G V T G N+ GQLG G ++ R +P  +  L     V  +AAG 
Sbjct: 126 --IAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLT---GVTAVAAGR 180

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++  A+   G V+++G      LG G     L P  +Q        V+ +SA D   VAL
Sbjct: 181 NHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGL----TGVIAISANDSETVAL 236

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G V+ WG    G LG G    +  P  +  L    A+
Sbjct: 237 RQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAI 276



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 116/278 (41%), Gaps = 24/278 (8%)

Query: 107  VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            V+   G   I+ G  HT+ L  + +V++ G +  G LG G  T +    T +       V
Sbjct: 1073 VQGLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRA---TPVQVQGLTGV 1129

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQ 220
            + ++A   H   + Q G V+  G NS    G     HR T      P  V+ L GV    
Sbjct: 1130 IAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRAT------PVQVQGLTGVIA-- 1181

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            + AG   T  L   G V   G N  GQLG G T  R TP  +  L     V  IAAG  +
Sbjct: 1182 IAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLT---GVTTIAAGYFH 1238

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
              AV  +G  +++G      LG G   D   P  +Q        V  ++AG  H V +  
Sbjct: 1239 TAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGL----TGVSALAAGYAHTVVVGE 1294

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G V+ WG      LG+G   D++ P  + +L    ++
Sbjct: 1295 DGTVWAWGNNSGTQLGNGSSTDRSTPVQVEALTGAFSL 1332



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 25/274 (9%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + I  G  HT+ L+ + +V++ G ++ G LG G  T +    + +     A V+ ++ 
Sbjct: 622 GAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHR---HSPVQVQGLADVIAIAT 678

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNF 227
           +  H   V Q G V+T G NSS   G   T +   P+    L +A   +     T  +  
Sbjct: 679 NNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSSQTVAMRQ 738

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              L         G N  GQLG G T  R TP  +  L +V     +AAG  +M A   +
Sbjct: 739 DRTL------WAWGDNHWGQLGDGTTTRRLTPVQVQGLMDV---TAMAAGGYHMAAAGQD 789

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G ++++G  S   LG G     L P  +Q           ++AGD H VA+   G V+ W
Sbjct: 790 GTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSA--TATAIAAGDSHTVAVRQDGTVWAW 847

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G  + G LG     D T  + L+ ++  + VQGL
Sbjct: 848 GSNFSGQLG-----DGTTAQSLTPVQ--VQVQGL 874



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 14/216 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  ++AS      V Q G V+  GDN+    G   T R +  P  V+ L GV      A 
Sbjct: 473 ITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRL-TPVQVQGLAGVTA---VAA 528

Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            ++   + +R  G V   G    GQLG G  +DR TP  +  L     V  IAAG ++ +
Sbjct: 529 SDYH-LVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLT---GVTAIAAGSNHTV 584

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+  +G V+++G  +   LG G     L P  +Q     G   V ++AG  H VAL   G
Sbjct: 585 ALRQDGTVWAWGFNNYGQLGDGTTAGHLTP--VQVPGVTG--AVAIAAGGSHTVALLQDG 640

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V+TWG    G LG G    +  P  +  L   +A+
Sbjct: 641 TVWTWGYNIWGQLGDGTTTHRHSPVQVQGLADVIAI 676



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 113/269 (42%), Gaps = 18/269 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G   I  G  HT+ L  + +V++ G +  G LG G   T     T +  P     
Sbjct: 567 VQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDG---TTAGHLTPVQVPGVTGA 623

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V ++A  +H   +LQ G V+T G N     G   T      P  V+ L  V       G 
Sbjct: 624 VAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHR-HSPVQVQGLADVIAIATNNGH 682

Query: 226 NFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                + +R  G V T G N+ GQLG G T  R TP  +  L +  +++  +   S  +A
Sbjct: 683 T----VAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSS---SQTVA 735

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +  ++++G      LG G     L P  +Q      + V  ++AG  H+ A    G 
Sbjct: 736 MRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGT 791

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           ++TWG    G LG G    + LP  +  L
Sbjct: 792 LWTWGLNSYGQLGGGPLSYRLLPVQVQGL 820



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 125/273 (45%), Gaps = 10/273 (3%)

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
            HS   V+  A  + I T   HT+ +  + +V++ G +  G LG G  TTQ ++  +++ 
Sbjct: 661 RHSPVQVQGLADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDG-TTTQRLTPVQVHG 719

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            + A  +  S+S+  A  + Q   ++  GDN     G   T R +  P  V+ L  V   
Sbjct: 720 LTDATAILTSSSQTVA--MRQDRTLWAWGDNHWGQLGDGTTTRRL-TPVQVQGLMDVTA- 775

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            + AG          G + T G N++GQLG G    R  P  +  L    +   IAAG S
Sbjct: 776 -MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSA-TATAIAAGDS 833

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +AV  +G V+++GS  +  LG G     L P  +Q   +  + V  ++AG  H+ A  
Sbjct: 834 HTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQV--QGLMDVTAMAAGGYHMAAAG 891

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             G ++TWG    G LG G    + LP  +  L
Sbjct: 892 QDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGL 924


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 203 PI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           PI F+  L   LK    +QV         +T    V++ G  + GQLGHGD   R  P S
Sbjct: 66  PIPFKIELPTILK---IRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTS 122

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L+   S+ ++A G  + +  + NG+V + G GS  CLGHG+ H   +PR I+T    
Sbjct: 123 VEALK-GKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLL-- 179

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            + V  +S G EHVV +   G ++ WGKG  G LG GDE D
Sbjct: 180 SVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEED 220



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 4/201 (1%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +I  P+   + QV+ S  H A V     V++ G+ S    GH D + P   P  VEALKG
Sbjct: 70  KIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLD-PRNVPTSVEALKG 128

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
               +V  G  F+ F +  G V TCG  + G LGHGD      P+ I  L  V  V  I+
Sbjct: 129 KSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSV-DVTSIS 187

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            GP +++ V  +G ++++G G +  LG G++ D  +P  ++   R  + +  V  G +  
Sbjct: 188 CGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEP--MEVTLRDPVFIQEVKCGVDGT 245

Query: 336 VALDSSGYVYTWGKGYCGALG 356
           + L   G +   G      LG
Sbjct: 246 MFLTDMGCLLACGSNAYNKLG 266



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 116/306 (37%), Gaps = 74/306 (24%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+   R H  L++    V+S G    G LGHG    + V  T +       + +V+    
Sbjct: 81  QVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVP-TSVEALKGKSITRVACGAG 139

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-------------------- 213
            + F   +G V TCGD S+ C GH D +    RPRL+E L                    
Sbjct: 140 FSVFGSDNGIVMTCGDGSTGCLGHGDYHS-ASRPRLIETLLSVDVTSISCGPEHVVGVGV 198

Query: 214 --------KG------------------------VPCKQVTAGLNFTGFLTIRGHVHTCG 241
                   KG                        V  ++V  G++ T FLT  G +  CG
Sbjct: 199 DGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVDGTMFLTDMGCLLACG 258

Query: 242 SNTHGQLG----------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           SN + +LG                  +   R  P ++  L +   V+ +  GP +   V 
Sbjct: 259 SNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKF-RVLDMVVGPHHSAVVV 317

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             G+VY FG   +  LG G       P  +QT   K I    V+ G+++ VA     ++Y
Sbjct: 318 EPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLIST--VACGEDYTVAGAMDNFLY 375

Query: 346 TWGKGY 351
            WGKG+
Sbjct: 376 LWGKGW 381


>gi|281211994|gb|EFA86155.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 537

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 130/303 (42%), Gaps = 43/303 (14%)

Query: 115 QITTGRYHTLLISNSSVF--------------SCGSSLCGVLGHGPETTQCVSFTRINFP 160
           Q+  GR  TL+++++ +               S GS+  G LG G       +   +   
Sbjct: 155 QVHLGRSFTLILTSNKLLNNSFNKSEEQGKLLSVGSNDFGQLGLGEGMRGSSTPRVVEKL 214

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---------------------- 198
           +   +V + A  +H+  V +SG  F  G N     G R                      
Sbjct: 215 NNQELVSIGAGFDHSMAVTKSGHTFGWGYNVEGQIGQRIVEYKRVESAGENVDSMENSMT 274

Query: 199 -DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDR 256
            D    I  P LV  ++ +   +V  G + +  ++ RG+V+  G+N  G LG GD  L R
Sbjct: 275 PDAEYNI--PTLVPEMESIKVAKVYCGYDCSFLVSARGNVYAMGNNETGTLGVGDDKLGR 332

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAI 315
            T  +   + E   V Q++ G ++ L +  +G VYS G GS   LG G+   +   P  I
Sbjct: 333 VTKPTKVAMPE--KVKQLSCGATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLI 390

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
             F   GI V +VSAG  H + L   G VYTWG G  G LGH  E +  +P+ + SL   
Sbjct: 391 PFFHENGIRVTQVSAGGAHSMVLTDEGQVYTWGCGENGKLGHNSETNSNIPQLVKSLAKR 450

Query: 376 LAV 378
            A+
Sbjct: 451 NAI 453



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 6/157 (3%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASENHAAFVLQSG 182
           L+ +  +V++ G++  G LG G +    V+  T++  P    V Q+S    H  F+ +SG
Sbjct: 305 LVSARGNVYAMGNNETGTLGVGDDKLGRVTKPTKVAMPE--KVKQLSCGATHTLFLAESG 362

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +V++CG  S    G  D     + P L+      G+   QV+AG   +  LT  G V+T 
Sbjct: 363 RVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENGIRVTQVSAGGAHSMVLTDEGQVYTW 422

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           G   +G+LGH    +   P+ +  L +  +++ IAAG
Sbjct: 423 GCGENGKLGHNSETNSNIPQLVKSLAKRNAIL-IAAG 458


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 10/240 (4%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            QI  G+  T +I +N +V +CG    G LG G   +  Q    + +       +V    S
Sbjct: 3217 QIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGS 3276

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  +
Sbjct: 3277 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVV 3335

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 289
            +  G + T G+  +G+LG G+T ++  P+ +  LE  G +V Q+  G ++ LAV+ +G  
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALE--GQMVGQVGCGLNHTLAVSADGNT 3393

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+SFG G    LG G    +  P+ +      GI V +V  G +  VAL   G V+T+G+
Sbjct: 3394 VWSFGDGDYGKLGLGNSTAKSTPQRVDPL--CGIGVKKVCCGTQFSVALTKDGRVFTFGQ 3451



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 9/241 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       ++Q++    H+A V  
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVVSA 3337

Query: 181  SGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
             G++FT G+      G  +T N+ I  P  V AL+G    QV  GLN T  ++  G+ V 
Sbjct: 3338 DGKLFTFGNGDYGRLGLGNTSNKKI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVW 3395

Query: 239  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            + G   +G+LG G++  + TP+ + PL  +G V ++  G  + +A+T +G V++FG    
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDPLCGIG-VKKVCCGTQFSVALTKDGRVFTFGQ--E 3452

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              +G  E       R  Q    +   V  V  G EH +AL S+G V+ WG    G LG G
Sbjct: 3453 RLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG 3512

Query: 359  D 359
            D
Sbjct: 3513 D 3513



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 199  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            +T R +  P +  +      +Q+  G N T  +   G V  CG  ++G+LG G++ D   
Sbjct: 3198 ETGRSLLTPTVTPSFSQA--QQIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQ 3255

Query: 259  PKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
               I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +PR I+
Sbjct: 3256 LTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 3315

Query: 317  TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
                +G  +++++ G +H   + + G ++T+G G  G LG G+  +K +PE +++L+  +
Sbjct: 3316 AL--QGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQM 3373

Query: 377  AVQ 379
              Q
Sbjct: 3374 VGQ 3376



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 103/252 (40%), Gaps = 27/252 (10%)

Query: 87   NGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLIS--NSSVFSCGSSLCGVL 142
            NG++ R+     S +   + V    G M  Q+  G  HTL +S   ++V+S G    G L
Sbjct: 3346 NGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKL 3405

Query: 143  GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
            G G  T +     R++      V +V      +  + + G+VFT G            +R
Sbjct: 3406 GLGNSTAKSTP-QRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFG-QERLIGQPESRSR 3463

Query: 203  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
               RP+ V AL+    + V  G   +  LT  G V   GSN  GQLG GDT  R      
Sbjct: 3464 NHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNAR------ 3517

Query: 263  APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
                           P  + A+ G  V   +GS  +  LG G+ +   +P  +     +G
Sbjct: 3518 -------------REPCLVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDL--QG 3562

Query: 323  IHVVRVSAGDEH 334
             +V ++SAG  H
Sbjct: 3563 KNVRQISAGRNH 3574


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 9/250 (3%)

Query: 116 ITTGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  H L  L ++++V S G +  G LG G +  +C   T I+  S +  V V+A   
Sbjct: 143 IACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHP-TPISGLSQSIPVFVAAGSQ 201

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + G++F+ G  +    GH +   P F PR +  L G     V AGL  +  +  
Sbjct: 202 HSFVLSKFGELFSFGCGTFGRLGHGNE-LPSFNPRPISTLVGKHIVSVAAGLMHSAAVDS 260

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           +G ++T G N +GQLG G       P     LE   ++V++  G ++ L +  NG VYSF
Sbjct: 261 QGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERF-NIVKVVCGKNHTLVLDVNGHVYSF 319

Query: 294 GSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
             G N C  LG G   D ++P  I    ++   ++ ++AG  HV+ L   G VY++G   
Sbjct: 320 --GFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYIS 377

Query: 352 CGALGHGDEI 361
            GALG GD +
Sbjct: 378 DGALGLGDVV 387



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 124/299 (41%), Gaps = 52/299 (17%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR--INFPSAAHVVQVSASE 172
           +  G  H+ ++S    +FS G    G LGHG E     SF    I+     H+V V+A  
Sbjct: 196 VAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELP---SFNPRPISTLVGKHIVSVAAGL 252

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+A V   G ++T G N     G     +    P   + L+     +V  G N T  L 
Sbjct: 253 MHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTL-PNKNKELERFNIVKVVCGKNHTLVLD 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           + GHV++ G N  GQLG G   D   P  I   L++   ++ IAAG  ++L +T  G VY
Sbjct: 312 VNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVY 371

Query: 292 SFGSGSNFCLGHGE--------------------------------------------QH 307
           SFG  S+  LG G+                                             +
Sbjct: 372 SFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNN 431

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +L P+ ++     G   V+++AG  H   + SSG +YT+G G    LG+  + D+ +P
Sbjct: 432 AKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDMP 490



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 3/137 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G N  GQLG GD ++R  P  I+ L +   V  +AAG  +   ++  G ++SFG G
Sbjct: 160 VLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVF-VAAGSQHSFVLSKFGELFSFGCG 218

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           +   LGHG +     PR I T    G H+V V+AG  H  A+DS G +YTWG    G LG
Sbjct: 219 TFGRLGHGNELPSFNPRPISTLV--GKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLG 276

Query: 357 HGDEIDKTLPEPLSSLK 373
            G     TLP     L+
Sbjct: 277 LGTVKKHTLPNKNKELE 293



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAHVVQVSA 170
           +++  G+ HTL++  N  V+S G ++CG LG G   T  +   RI+        ++ ++A
Sbjct: 298 VKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIG-SYTDSIKPNRIDLDLKQNDEIIDIAA 356

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FT 228
              H   + + G V++ G  S    G  D      RP+L+      P        N    
Sbjct: 357 GYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLM------PFSHFNHEFNDSID 410

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGN 287
            +  I G  +   S++   + + +   +  PK +    E+G V V+IAAG  +   +T +
Sbjct: 411 SYKEIYGEYN---SDSENDINNNNA--KLPPKVVELHNEIGDVAVKIAAGGWHSAIITSS 465

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQP 312
           G +Y+FG G NF LG+  Q D+  P
Sbjct: 466 GRLYTFGLGDNFRLGNNCQEDQDMP 490



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 315 IQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           + T  ++G+ V  ++ GD H +A L +   V +WG    G LG GD++++  P P+S L 
Sbjct: 130 LPTLIKQGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLS 189

Query: 374 SHLAV 378
             + V
Sbjct: 190 QSIPV 194


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 13/281 (4%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           LQS+  +   V  SAGN  + T         +  +F  G++  G LG G +    +   R
Sbjct: 42  LQSIRQAC--VFGSAGNEVLYT-------TVDDEIFVLGTNCSGCLGIG-DIQSTIEPRR 91

Query: 157 INFPSAAHVVQVS-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +N  +   +  +S  S  H       G+VFT G N+    G+  TN  +    +   L  
Sbjct: 92  LNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN 151

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
               +V  G   +  LT  G V   G N  GQ+G G T ++P P+ +    +   V+ IA
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIA 211

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G    +AV   G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H 
Sbjct: 212 CGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHT 269

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           + L   G VY WG    G LG G++ +++ P P+   K  +
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRI 310



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQSIRQACVFGSAG-NEVLYTTVDDEIFVLGTNCSGCLGIGDIQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T +G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLNSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V+ V+ G  H + L S G V+ WG    G +G G   ++ +P  ++    +  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 379 QGLS 382
             ++
Sbjct: 208 MNIA 211


>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
 gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 394

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 124/257 (48%), Gaps = 14/257 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+ + +V S G++  G LG+G  T Q    T     + + V +VSA  NHA   ++ G+V
Sbjct: 90  LLKDGTVKSWGNNTTGQLGNGTTTAQPFPAT---VAALSGVSEVSAGLNHA-LAVKGGRV 145

Query: 185 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
              G+N+S   G  +DT  P   P  V++L  V  K V AG +F+  L   G V T G  
Sbjct: 146 LAWGNNASKQLGTGQDTTTPYKAPIPVQSLDKV--KDVGAGCDFSVALRQDGTVWTWGKG 203

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +G+LG G+   R TP+ +  L +V SV   A G  ++LA+T +GVV ++G G+   LG+
Sbjct: 204 DNGRLGTGNNTTRETPQKVPDLADVESV---AVGCEHVLALTADGVVKAWGKGAEGQLGN 260

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
               D  +P  +         V  V A      A+   G V  WGK     LG G   ++
Sbjct: 261 DSTADSSRPVDVAHLD----AVATVFATSASGFAVLDDGSVAGWGKNAERQLGDGTNANR 316

Query: 364 TLPEPLSSLKSHLAVQG 380
           T P  L  LK   ++ G
Sbjct: 317 TTPVVLDHLKGVQSIAG 333



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 12/178 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G+NT GQLG+G T  +P P ++A L     V +++AG ++ LAV G G V ++G
Sbjct: 94  GTVKSWGNNTTGQLGNGTTTAQPFPATVAALS---GVSEVSAGLNHALAVKG-GRVLAWG 149

Query: 295 SGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           + ++  LG G+        P  +Q+  +    V  V AG +  VAL   G V+TWGKG  
Sbjct: 150 NNASKQLGTGQDTTTPYKAPIPVQSLDK----VKDVGAGCDFSVALRQDGTVWTWGKGDN 205

Query: 353 GALGHGDEIDKTLPEPLSSLKS--HLAVQGLSVLAEVCPTIVQEDTRSCSDIICHDST 408
           G LG G+   +  P+ +  L     +AV    VLA     +V+   +     + +DST
Sbjct: 206 GRLGTGNNTTRETPQKVPDLADVESVAVGCEHVLALTADGVVKAWGKGAEGQLGNDST 263



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 104/253 (41%), Gaps = 21/253 (8%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +G  +++ G  H L +    V + G++    LG G +TT       I   S   V  V A
Sbjct: 125 SGVSEVSAGLNHALAVKGGRVLAWGNNASKQLGTGQDTTTPYK-APIPVQSLDKVKDVGA 183

Query: 171 SENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNR-PIFRPRL--VEALKGVPCKQVTAGL 225
             + +  + Q G V+T G  DN     G+  T   P   P L  VE++  V C+ V A  
Sbjct: 184 GCDFSVALRQDGTVWTWGKGDNGRLGTGNNTTRETPQKVPDLADVESVA-VGCEHVLA-- 240

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                LT  G V   G    GQLG+  T D   P  +A L+ V +V   +A      AV 
Sbjct: 241 -----LTADGVVKAWGKGAEGQLGNDSTADSSRPVDVAHLDAVATVFATSA---SGFAVL 292

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V  +G  +   LG G   +   P  +     KG+  +   A D  + ALD  G V 
Sbjct: 293 DDGSVAGWGKNAERQLGDGTNANRTTPVVLDHL--KGVQSIAGGA-DFTLAALD-DGSVI 348

Query: 346 TWGKGYCGALGHG 358
            WG      LG G
Sbjct: 349 GWGANAAAQLGDG 361



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 19/158 (12%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-------VGSVVQIAAGPSYMLAVTGNGV 289
           V   G N  GQLG+G TL + TP ++A +          G     AA   + +A+  +G 
Sbjct: 36  VRAWGENAQGQLGNGSTLAQQTPAAVAGITRDDVRELSGGGGGAAAAANGFAVALLKDGT 95

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V S+G+ +   LG+G    +  P  +         V  VSAG  H +A+   G V  WG 
Sbjct: 96  VKSWGNNTTGQLGNGTTTAQPFPATVAALS----GVSEVSAGLNHALAV-KGGRVLAWGN 150

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
                LG G   D T P      K+ + VQ L  + +V
Sbjct: 151 NASKQLGTGQ--DTTTP-----YKAPIPVQSLDKVKDV 181


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 257 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 315

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 316 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 375

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 376 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 433

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQ
Sbjct: 434 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQ 481



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 10/184 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 246 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 305

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 324
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 306 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 363

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL       GL V 
Sbjct: 364 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL------SGLWVK 417

Query: 385 AEVC 388
           A  C
Sbjct: 418 AAAC 421



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 367 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 426

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 427 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 483

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 484 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 535

Query: 283 AV 284
           A+
Sbjct: 536 AI 537


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 6/251 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           +  V+  G +    LG G ++   ++  +++  S   ++ +S  S  H   V + G+++ 
Sbjct: 40  DDEVYVLGLNCSNCLGTG-DSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G N     G+  TN+ +  P LV   L+G    +V+ G + +  LT  G V   G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++PTP+ ++   +   +V IA G +  +AVT NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             ++L P   +    +G  V+++++G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTP--CRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275

Query: 366 PEPLSSLKSHL 376
           P  + + K  +
Sbjct: 276 PVQVMTEKERI 286



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 11/233 (4%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
           H LL++ +  +++ G +    LG+G  T Q VS   ++       V +VS   +H+  + 
Sbjct: 86  HVLLVTEDGELYAWGHNGYSQLGNGT-TNQGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144

Query: 180 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             G+VF  G N+    G   T N+P  R ++   L+      +  G   +  +T  G V+
Sbjct: 145 HEGEVFAWGYNNCGQVGSGSTANQPTPR-KVSNCLQNKVIVNIACGQTSSMAVTDNGEVY 203

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G N +GQLG G+  ++ TP  +  L+    V+QIA+G ++ LA+T  G++Y++G+ + 
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRLIALQGF-CVLQIASGYAHSLALTDEGLLYAWGANTY 262

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA--GDEHVVALDSSGYVYTWGK 349
             LG G + ++L P  + T + +   +V ++A        A   SG VY WG+
Sbjct: 263 GQLGTGNKSNQLSPVQVMTEKER---IVEIAACHSTHTSAAKTQSGQVYMWGQ 312



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 3/150 (2%)

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 281
           A  N   ++T    V+  G N    LG GD+     PK +  L     + +   +GP ++
Sbjct: 29  ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGP-HV 87

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           L VT +G +Y++G      LG+G  +  + P  + T   +G  V  VS G  H +AL   
Sbjct: 88  LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-NLQGKRVTEVSCGSHHSLALTHE 146

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           G V+ WG   CG +G G   ++  P  +S+
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVSN 176


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 18/256 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 229

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 230 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 288

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 289 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 347

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 348 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 357 HGDEIDKTLPEPLSSL 372
           H D+  K +P  + +L
Sbjct: 406 HSDKESKLVPTCVKAL 421



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 312 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 370

Query: 225 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 371 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 429

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           +   +  +A+T  GVV++ GS  +  LG       L   +I +     K   V  +S+G 
Sbjct: 430 SCAKALTVALTITGVVFTIGSKEHGQLGS----HRLDDSSICSVEGPLKTEFVREISSGS 485

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 486 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 526



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 371

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 372 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 430

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 431 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 489

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 490 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 543



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 158 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 217

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 218 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 276

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 277 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G  G LGHGD      P+ + SLK      GL V A  C
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLK------GLRVKAVAC 369


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 13/302 (4%)

Query: 81  ELLNRCNGNWKRVLR-FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSL 138
           EL   C GN   V++  L   + SS I        QI+ G +HTL +SN+  +++CGS+ 
Sbjct: 11  ELCIECPGNLDLVIKPTLSKWKESSHI-------QQISAGEFHTLYLSNNGHLYTCGSNE 63

Query: 139 CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR 198
            G LG    +    S   ++      +  ++    H+  + + GQ F+ G +S    G  
Sbjct: 64  VGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSN 123

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP- 257
             +    +P++++ L      QV  G   T  LT  G ++  G+N++GQ G G+  ++  
Sbjct: 124 LGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKET 183

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           TP++++ +  +  +  IA G ++  A++ +G V+ +G  S+  LG  ++     P  ++T
Sbjct: 184 TPQALSSILGI-PIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKT 242

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
            R   + V  +S G++    L   G V+T G G  G  GHG+  D+ +P  +  L     
Sbjct: 243 LR--NVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTV 300

Query: 378 VQ 379
            Q
Sbjct: 301 TQ 302



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 3/205 (1%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           FS GS   G LG    +        I   +  +V+QV+    H   +  +G ++  G NS
Sbjct: 110 FSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANS 169

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
              CG  + +     P+ + ++ G+P   +  G N T  L+  G V   G N+HGQLG  
Sbjct: 170 YGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQ 229

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           D   R  P  +  L  V  V  I+ G  +   +T +G V++ G+G     GHG   DEL 
Sbjct: 230 DRESRCYPTHLKTLRNV-KVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELV 288

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVV 336
           PR +      G  V +V+ G  H++
Sbjct: 289 PRKVMELM--GSTVTQVACGRRHML 311


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 20/273 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCG-VLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           ++  G YHT  +++S  V++ G   C  ++  G   +Q ++  + + P     +  ++  
Sbjct: 360 KVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTH-KFSLPVEGISISSIACG 418

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 229
           E H A V   G++FT GD +    GH + +     P+ VE+LKG+  + V  G   T   
Sbjct: 419 EWHTAIVSSCGRLFTYGDGTFGVLGHGNYH-SFSSPKEVESLKGLCVRSVACGTWHTAAI 477

Query: 230 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                    + T  G + T G    G+LGH D +++  P  ++ L +    VQ++ G   
Sbjct: 478 IEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY-DFVQVSCGRMM 536

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+T  G V++ GS     LG+    D      +     K  +V  +S G  HV  L S
Sbjct: 537 TLALTNMGKVFAMGSAKYGQLGNPHVKDRA---VVVEGMLKQEYVKMISCGSYHVAVLTS 593

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           SG VYTWGKG  G LG GD  ++  P  + +L+
Sbjct: 594 SGSVYTWGKGENGELGLGDTENRYTPCFVEALR 626



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 17/228 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V++L  +  K+V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDSLSDIRVKKVACG 364

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G V+T G ++   L     +     T K   P+E + S+  IA G  +  
Sbjct: 365 EYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGI-SISSIACGEWHTA 423

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A+    
Sbjct: 424 IVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESL--KGLCVRSVACGTWHTAAIIEVS 481

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                   S+G ++TWG    G LGH D ++K +P  +S L  +  VQ
Sbjct: 482 AERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQ 529



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 17/189 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  + V  G N    +T +G V+  G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLS 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-----K 321
           ++  V ++A G  +  A+T +G VY++G  S  C    +  DE + R+     +     +
Sbjct: 355 DI-RVKKVACGEYHTCALTDSGDVYTWGKDS--C---SDLVDEGRIRSQWLTHKFSLPVE 408

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           GI +  ++ G+ H   + S G ++T+G G  G LGHG+    + P+ + SLK      GL
Sbjct: 409 GISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLK------GL 462

Query: 382 SVLAEVCPT 390
            V +  C T
Sbjct: 463 CVRSVACGT 471


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 18/256 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 235 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 294

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 295 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 353

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 354 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 412

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 413 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 470

Query: 357 HGDEIDKTLPEPLSSL 372
           H D+  K +P  + +L
Sbjct: 471 HSDKESKLVPTCVKAL 486



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 377 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 435

Query: 225 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 436 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 494

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           +   +  +A+T  GVV++ GS  +  LG     D     +I +     K   V  +S+G 
Sbjct: 495 SCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDS----SICSVEGPLKTEFVREISSGS 550

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 551 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 591



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 436

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 437 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 495

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 496 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 554

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 555 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 608



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 223 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 282

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 283 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 341

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 342 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 401

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
           G  G LGHGD      P+ + SLK      GL V A  C
Sbjct: 402 GTFGVLGHGDTSSVARPKEVESLK------GLRVKAVAC 434


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 23/291 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
             V+TWGKG  G LGHGD  D+ +P  + +LK     H+A  G +  A +C
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIAC-GANFTAAIC 419



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 8/209 (3%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSS 371
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS 
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 372 LKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
           LK+     G+   A +   IV   + S S
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVS 264



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P+ +S      A+ GL V    C T
Sbjct: 172 WIPKRISG-----ALDGLPVAYVSCGT 193


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 19/260 (7%)

Query: 110 SAGN---MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSA 162
           S GN   +Q   G  H+LL+ S+ +V+SCG++ CG LG      +C    R   I     
Sbjct: 33  SLGNQTLLQAACGERHSLLLLSDGTVWSCGNNSCGQLGR----KRCQKHGRPAQIQALET 88

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             +V VS  + H+  + + G+VF+ G  S    G R+  +    P+ ++ L      QV+
Sbjct: 89  QDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVS 148

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  L   G V + G N HGQLG G+ +  + +P+ +  L+ +  + Q+AAG ++ 
Sbjct: 149 CGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGI-PLAQVAAGGAHS 207

Query: 282 LAVTGNGVVYSFG---SGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            A++ +G  Y +G   +G     G  E  +++ +P +I   +R  + V  +S GDEH   
Sbjct: 208 FALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKR--LQVTYISCGDEHTAV 265

Query: 338 LDSSGYVYTWGKGYCGALGH 357
           L   G V+T+G    G LG 
Sbjct: 266 LTQDGKVFTFGSNDSGQLGR 285



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 89/194 (45%), Gaps = 10/194 (5%)

Query: 185 FTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +  GDNSS   G     R   R + R R   +L      Q   G   +  L   G V +C
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKARAV-RCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSC 61

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+N+ GQLG         P  I  LE    +V ++ G  + LA+   G V+S+GSGS+  
Sbjct: 62  GNNSCGQLGRKRCQKHGRPAQIQALE-TQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQ 120

Query: 301 LGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
           LG  E +     P+ I         +++VS G  H +AL   G V++WGK   G LG G+
Sbjct: 121 LGIREFKKLSSIPKKIDEL--SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGE 178

Query: 360 EI-DKTLPEPLSSL 372
            +  +  P+ + SL
Sbjct: 179 NVPSQASPQWVKSL 192


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 131/267 (49%), Gaps = 19/267 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   VF  G +   +L +  +T++ +    ++  +   V  ++  E HAA + + G+V
Sbjct: 225 LDSLKDVFFWGDAFGSILDYD-DTSKSLPML-VDSTNMLDVQSIACGETHAAIITKQGEV 282

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G+ SS   G++  N  + RP+LVE++  +  K V  G      +T+ G +   G   
Sbjct: 283 YSWGNESSGGIGNQ-VNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGP 341

Query: 245 H-GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           H GQL  + + L  P  K  +PL+ + SVV+IA GP +   +T +G +Y++G G+   LG
Sbjct: 342 HMGQLDCYANNLWFPH-KLFSPLDGI-SVVKIACGPWHTAIITSSGQLYTYGDGTFGVLG 399

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYC 352
           HG+     +P+ ++    KG  V  V+ G  H  A+               ++TWG    
Sbjct: 400 HGDTQGTTRPKEVEYL--KGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADR 457

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G LGH D+  K +P  + SL  +  +Q
Sbjct: 458 GKLGHADKKMKLIPTCVDSLTDYDFIQ 484



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 30/305 (9%)

Query: 122 HTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSF-TRINFP-------SAAHVVQVSA 170
           H   ++  S  +C  ++ G L   G GP   Q   +   + FP           VV+++ 
Sbjct: 314 HVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIAC 373

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +  SGQ++T GD +    GH DT +   RP+ VE LKG   K V  G   T  
Sbjct: 374 GPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEVEYLKGSRVKCVACGPWHTAA 432

Query: 231 L----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +          + R  + T G    G+LGH D   +  P  +  L +    +Q++ G + 
Sbjct: 433 IVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDY-DFIQVSCGMAL 491

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + ++  GVV++ GS  +  LG+    D     A++   +    V  +S+G  HV  L +
Sbjct: 492 TVVLSITGVVFTIGSSMHGQLGN-PHADGRTVCAVEGLLKTEF-VRHISSGSSHVAVLTT 549

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC--PTIVQED 395
           +G V+TWGKG  G LG GD ++++ P  + +L+         G +  A VC    I ++D
Sbjct: 550 NGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAVCLHKIISRKD 609

Query: 396 TRSCS 400
              CS
Sbjct: 610 LSVCS 614


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 11/270 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 24  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 81

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 82  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 141

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 142 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 200

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 201 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 258

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           G      L H     +  P+ +  +  H++
Sbjct: 259 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVS 288



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 70

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 71  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 127

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+
Sbjct: 128 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 177



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 14  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 72

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 73  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 131

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 132 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 189

Query: 334 HVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLS 370
           H  AL   G  + WG    G L   G+   + + +P S
Sbjct: 190 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHS 227



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 189 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 249 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 308

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 309 SLGRGPS 315


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 140/305 (45%), Gaps = 30/305 (9%)

Query: 122 HTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRIN-FP-------SAAHVVQVSA 170
           H   ++  S  +C  ++ G L   G GP   Q  S+ R   FP           VV+++ 
Sbjct: 317 HVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIAC 376

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +  SGQ++T GD +    GH DT +   RP+ VE+LKG   K V  G   T  
Sbjct: 377 GPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEVESLKGSRVKCVACGPWHTAA 435

Query: 231 L----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +          + R  + T G    G+LGH D   +  P  +  L +    +Q++ G + 
Sbjct: 436 IVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDY-DFIQVSCGTAL 494

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A++  GVV++ GS  +  LG+    D     A++    K   V  +S+G  HV  + +
Sbjct: 495 TVALSVTGVVFTSGSSMHGQLGN-PHADGKTVSAVEGLL-KSEFVRHISSGSSHVAVVTT 552

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---GLSVLAEVC--PTIVQED 395
           +G V+TWGKG  G LG GD ++++ P  + +L+         G +  A VC    I ++D
Sbjct: 553 NGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYTAAVCLHKVISRKD 612

Query: 396 TRSCS 400
              CS
Sbjct: 613 LSVCS 617



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 19/228 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  E HAA + + G+V++ G+ SS   G++  N  + RP++V++L  +  K V  G
Sbjct: 266 VQSIACGETHAAIITKQGEVYSWGNESSGRIGNQ-VNIKVSRPKVVQSLASLHVKDVAYG 324

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +   G   +  +G  D+  R      K  +PL+ + SVV+IA GP + 
Sbjct: 325 SKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGI-SVVKIACGPWHT 381

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESL--KGSRVKCVACGPWHTAAIVEV 439

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                       ++TWG    G LGH D+  K +P  + SL  +  +Q
Sbjct: 440 ISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQ 487



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 10/193 (5%)

Query: 184 VFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           VF  GD   S   CG  DT++P+  P LV++   +  + +  G      +T +G V++ G
Sbjct: 234 VFFWGDAFGSILECG--DTSKPL--PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWG 289

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           + + G++G+   +    PK +  L  +  V  +A G  +  AVT +G +  +G G    +
Sbjct: 290 NESSGRIGNQVNIKVSRPKVVQSLASL-HVKDVAYGSKHTCAVTVSGELIEWGEGPY--M 346

Query: 302 GHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           G  + +   Q    + F    GI VV+++ G  H   + SSG +YT+G G  G LGHGD 
Sbjct: 347 GQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT 406

Query: 361 IDKTLPEPLSSLK 373
              T P+ + SLK
Sbjct: 407 QGTTRPKEVESLK 419


>gi|209875367|ref|XP_002139126.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209554732|gb|EEA04777.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 1864

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 123/270 (45%), Gaps = 23/270 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS-----GQVF 185
           +++ G +   VLG G +T +    TR+ F S   V QVS    H A +++S     G+V+
Sbjct: 60  LYAWGENTNNVLGFGIDTDKVDLPTRVPFFSIYDVFQVSCGYLHTAVLIKSITESGGKVY 119

Query: 186 TCGDNSSFCCGHR-------------DTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 230
           T G  +    G+              D N   +   P +V+        ++  G N T  
Sbjct: 120 TMGLGNRGRLGYTRSDTEFGLEEEYLDKNESWYSISPCIVKFPSNTKISRICCGANHTLA 179

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L+  GH+++ G    G LG G T D   P  I        V  IAAG  + L  T NG +
Sbjct: 180 LSDNGHLYSWGVGQFGCLGTGSTEDVFFPTKIEISNNSLKVQHIAAGSRHSLCCTENGNL 239

Query: 291 YSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +++GS +N  LG G  +  +L+P  +Q+      HV  V  G+ H   +D  G V+TWG 
Sbjct: 240 FAWGSNANGRLGIGGVNGIKLKPTIVQSMLP--YHVCFVVTGEAHSGCIDRMGIVFTWGN 297

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LGHG ++D  +P  +  + S   VQ
Sbjct: 298 GSNGQLGHGLQLDCPIPRKVHGISSIPFVQ 327



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 19/237 (8%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQ-VSAS 171
           +I  G  HTL +S N  ++S G    G LG G  +T+ V F T+I   + +  VQ ++A 
Sbjct: 169 RICCGANHTLALSDNGHLYSWGVGQFGCLGTG--STEDVFFPTKIEISNNSLKVQHIAAG 226

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+    ++G +F  G N++   G    N    +P +V+++       V  G   +G +
Sbjct: 227 SRHSLCCTENGNLFAWGSNANGRLGIGGVNGIKLKPTIVQSMLPYHVCFVVTGEAHSGCI 286

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V T G+ ++GQLGHG  LD P P+ +  +  +   VQ+A G    + +T +G VY
Sbjct: 287 DRMGIVFTWGNGSNGQLGHGLQLDCPIPRKVHGISSI-PFVQLAFGAFISMGLTQSGDVY 345

Query: 292 SFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            +GS         +QH+    P  +++F+    H   ++ G     A+D     Y+W
Sbjct: 346 IWGS---------KQHEIFSTPTKVKSFKSAICH---IACGPYISFAIDVRSIAYSW 390



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 91/223 (40%), Gaps = 24/223 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG----HRD-----TNRPIFRPRLVEALKG 215
           V Q++  E H   +   G V+T GDNS    G    HRD          F     E    
Sbjct: 491 VRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSLHRDLGETSNKNKTFVSEPNEVKFS 550

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            P ++V  G   T      G+  T G   +GQLG G   +   P  I  L    +V+ + 
Sbjct: 551 GPIRRVACGYWHTLCCDYSGNCFTWGRGDYGQLGTGAICNMYEPVGIISLN---NVIDVY 607

Query: 276 AGPSYMLAVTGNGVVYS-----FGSGSNFCLGHGE-----QHDELQPRAIQTFR--RKGI 323
            G SY   +   G+  S       SG  +  G+G+       D++  + I   R    G 
Sbjct: 608 GGESYSACIIATGITISKDLDTINSGDLWIWGNGDFGKLGLGDDVNGKCIAAPRYLNLGY 667

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +V+VS G  H +AL ++G + TWG GY G LG G   +   P
Sbjct: 668 PIVKVSLGTVHTLALTANGNLITWGAGYYGRLGVGTTNNHNRP 710



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 29/253 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +HTL    S + F+ G    G LG G     C  +  +   S  +V+ V   E+
Sbjct: 555 RVACGYWHTLCCDYSGNCFTWGRGDYGQLGTG---AICNMYEPVGIISLNNVIDVYGGES 611

Query: 174 HAAFVLQSG---------------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           ++A ++ +G                ++  GD      G     + I  PR +    G P 
Sbjct: 612 YSACIIATGITISKDLDTINSGDLWIWGNGDFGKLGLGDDVNGKCIAAPRYLNL--GYPI 669

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAG 277
            +V+ G   T  LT  G++ T G+  +G+LG G T +   P  I  P+ +V  +  IA G
Sbjct: 670 VKVSLGTVHTLALTANGNLITWGAGYYGRLGVGTTNNHNRPIIIKFPIGDV-RISDIAVG 728

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGI-HVVRVSAGDEHV 335
             + +AV+ +G ++ +G  S        + D LQP          G+  V  V A  +  
Sbjct: 729 TDHSMAVSVDGDLWIWGKASVVL----NETDVLQPHIFAKLESATGVPKVYSVYAHADIS 784

Query: 336 VALDSSGYVYTWG 348
            A+ ++G ++TWG
Sbjct: 785 YAITNTGELWTWG 797



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 12/129 (9%)

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQT 317
           KS+ P     +V QIA G ++ + +T  G VY++G  S   LG G  H +L       +T
Sbjct: 484 KSLPP----NTVRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSLHRDLGETSNKNKT 539

Query: 318 FRRKGIHVV------RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           F  +   V       RV+ G  H +  D SG  +TWG+G  G LG G   +   P  + S
Sbjct: 540 FVSEPNEVKFSGPIRRVACGYWHTLCCDYSGNCFTWGRGDYGQLGTGAICNMYEPVGIIS 599

Query: 372 LKSHLAVQG 380
           L + + V G
Sbjct: 600 LNNVIDVYG 608



 Score = 46.2 bits (108), Expect = 0.027,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 5/138 (3%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+   G+LG GD ++     +   L     +V+++ G  + LA+T NG + ++G+G    
Sbjct: 639 GNGDFGKLGLGDDVNGKCIAAPRYLNLGYPIVKVSLGTVHTLALTANGNLITWGAGYYGR 698

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G  ++  +P  I+ F    + +  ++ G +H +A+   G ++ WGK         +E
Sbjct: 699 LGVGTTNNHNRPIIIK-FPIGDVRISDIAVGTDHSMAVSVDGDLWIWGKASVVL----NE 753

Query: 361 IDKTLPEPLSSLKSHLAV 378
            D   P   + L+S   V
Sbjct: 754 TDVLQPHIFAKLESATGV 771


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 121/251 (48%), Gaps = 13/251 (5%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ +++ +   + V Q++    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            N     GH   + RP+  P LV+ +      Q+  G   +  LT  G V + G N  GQ
Sbjct: 62  SNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVLSWGDNECGQ 117

Query: 248 LGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           LGH    D    PK++  L    +VVQIA G ++ LA+T  G +Y++GS     LG    
Sbjct: 118 LGHASDQDVVQLPKTVRALVS-KTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTP 176

Query: 307 HDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            +  Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++
Sbjct: 177 SELGQCNAPMLLTTLL--GIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNR 234

Query: 364 TLPEPLSSLKS 374
             P  L +L++
Sbjct: 235 AYPTQLKTLRT 245



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 42/278 (15%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAAH 164
           QI  G  HTL ++ S  V++CGS+    LGH          PE   CV            
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV------------ 87

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++    H+  + + GQV + GDN     GH      +  P+ V AL      Q+  G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APL---EEVGSVVQ-IAA 276
            N +  LT  G ++  GSN +GQLG        TP  +    AP+     +G  V+ IA 
Sbjct: 148 NNHSLALTCCGELYAWGSNIYGQLG------VKTPSELGQCNAPMLLTTLLGIPVRAIAC 201

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           G ++   ++ +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE 
Sbjct: 202 GGNHSFLISKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEF 257

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V L + G V+T G G  G LGHG   ++ LP  +  L
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMEL 295



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 10/195 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L     +++ GS++ G LG   P E  QC +   +       V  ++ 
Sbjct: 142 VQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIAC 201

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +S  VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 202 GGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 259

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG   +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 260 FLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMV--MELMGSTISQVACGNRHTLAMVPAR 317

Query: 288 GVVYSFGSGSNFCLG 302
           G +Y FG GS+  LG
Sbjct: 318 GRIYGFGLGSSGQLG 332



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEML-PRMVMELMGSTISQVACGNRHTLAMVPA 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQ
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQ 533



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 10/184 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 298 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 357

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 324
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 358 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 415

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL       GL V 
Sbjct: 416 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL------SGLWVK 469

Query: 385 AEVC 388
           A  C
Sbjct: 470 AAAC 473



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 419 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 478

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 479 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 535

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 536 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 587

Query: 283 AV 284
           A+
Sbjct: 588 AI 589


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 11/255 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + + + ++  G++  G LG G  E  Q ++ +++ +   + + QV+    H  F+  SG+
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L      Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDN 117

Query: 244 THGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             GQLG     D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG
Sbjct: 118 DCGQLGQATDQDIVQLPKIVRQLVS-KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 303 ---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
                E     QP  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  D
Sbjct: 177 VNTPKEVTHSNQPVRLTTLL--GIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLND 234

Query: 360 EIDKTLPEPLSSLKS 374
           E  ++ P  L +L++
Sbjct: 235 ETSRSYPTQLKTLRT 249



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 20/267 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL +++S  V++CGS+    LGH   T + +    +       VVQ++    
Sbjct: 44  QVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPEL---LDYVVVQIACGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     G       +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVVYS 292
            G +++ GSN +GQLG        TPK +    +   +  +   P   +A  GN   + S
Sbjct: 161 CGELYSWGSNIYGQLGVN------TPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIIS 214

Query: 293 -----FGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
                FG G N C  LG  ++     P  ++T R  G+    V+ GDE  V L + G V+
Sbjct: 215 KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVF 272

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSL 372
           T G G  G LGHG   ++ LP  +  L
Sbjct: 273 TCGAGAYGQLGHGFGANEMLPRMVMEL 299



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 12/196 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P E T      R+       V  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 228
             NH+  + +S  VF  G N+   CG    N    R  P  ++ L+ +  + V  G  F+
Sbjct: 206 GGNHSFIISKSSAVFGWGRNN---CGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFS 262

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTG 286
            FLT  G V TCG+  +GQLGHG   +   P+ +  +E +GS + Q+A G  + LA V  
Sbjct: 263 VFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMV--MELMGSTITQVACGNRHTLALVPS 320

Query: 287 NGVVYSFGSGSNFCLG 302
            G VY FG GS+  LG
Sbjct: 321 RGRVYGFGLGSSGQLG 336



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ +IS SS VF  G + CG LG   ET++    T++       V  V+  +  
Sbjct: 203 IACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYP-TQLKTLRTLGVRFVACGDEF 261

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFGANEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G  + GQLG   T     P+ +
Sbjct: 321 RGRVYGFGLGSSGQLGTRSTKSLTLPQVV 349


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 142/311 (45%), Gaps = 26/311 (8%)

Query: 81  ELLNRCNGNWKRVLRFLQSVEHSSDIVE--TSAGNMQ-ITTGRYHTL-LISNSSVFSCGS 136
           E +   NG+  R+     S E++   +E  +  G ++ +  G  HTL LI +  +++ G+
Sbjct: 230 EAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALIESGELYAWGN 289

Query: 137 SLCGVLGHGPETTQCVSFTRINFPSAAHVV--QVSASENHAAFVLQSGQVFTCGDNSSFC 194
              G LG G +T    S TR N  S A V    +    +H+  +   G+ +  G N+   
Sbjct: 290 GSNGRLGLG-DTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQ 348

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQ-------VTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           CGH  TN   +  + +E+ +     +          G   T F T  G V++CG      
Sbjct: 349 CGHGHTNDQ-WTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGCGYKDS 407

Query: 248 --------LGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
                   LGHGD   R  P S+  L++    VV++A G  + LAVT NG VY++GSG+N
Sbjct: 408 RRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGAN 467

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LGHG++     P  ++     G  V    AG EH V L     ++T G+G  G LGHG
Sbjct: 468 GKLGHGDEESFDIPTLVRCM--DGKKVKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHG 525

Query: 359 DEIDKTLPEPL 369
           D   +  P  +
Sbjct: 526 DSQTRKRPTKI 536



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 13/143 (9%)

Query: 235 GHVHTCGSNTHGQLGHGD-----------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G++ + G   HG+LGHG            T ++  P  IA   +V    +I +  ++ +A
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDV-LFRKIDSLSTHSIA 224

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G   ++G+G  + LGHG    E  PR I+    KG  V  ++ G  H +AL  SG 
Sbjct: 225 ITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALIESGE 283

Query: 344 VYTWGKGYCGALGHGDEIDKTLP 366
           +Y WG G  G LG GD  D++ P
Sbjct: 284 LYAWGNGSNGRLGLGDTNDRSSP 306



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P ++ A + V  +++ +    +  +T +G     G+    +LGHG +    TP++I  L 
Sbjct: 201 PTMIAATRDVLFRKIDSLSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLS 260

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             G V  +A G  + LA+  +G +Y++G+GSN  LG G+ +D   P          +   
Sbjct: 261 LKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFR 320

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +  G  H + L   G  Y WGK   G  GHG   D+   + + S +
Sbjct: 321 HIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFR 367



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 33/227 (14%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA------HVVQV 168
           I  G  H+L +S +   ++ G +  G  GHG    Q       +F           VV  
Sbjct: 322 IFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYA 381

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR----PIF---------RPRLVEALKG 215
           +    H  F   SG+V++CG      CG++D+ R    P+          +P  V+AL  
Sbjct: 382 AGGWEHTLFCTASGRVYSCG------CGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDD 435

Query: 216 V--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSV 271
                 +V  G + +  +T  G V+T GS  +G+LGHGD  + D PT   +    +   V
Sbjct: 436 THEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPT---LVRCMDGKKV 492

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
               AG  + + +T +  +++ G G +  LGHG+     +P  I+ F
Sbjct: 493 KDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 12/273 (4%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           VE  +G + +  G+YH+L +  + +V++ G +L G LG G          +   P    V
Sbjct: 244 VEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPK-QVPGLGGV 302

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V VSA   H+  V   G V+  G+N+    G   +      P  V  + G     V AG 
Sbjct: 303 VAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGG-GSRAHAASPVQVLGVSG--AVAVAAGY 359

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G +   GSN  GQ G G     PTP  +  L     VV +AAG  ++LA+ 
Sbjct: 360 RHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLS---GVVSVAAGGGHVLALL 416

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++G  ++  LG G +H    PR +         VV V+AG    +A+   G V+
Sbjct: 417 SDGTVWAWGDNASGQLGDGTRHSRWVPRQVPELS----GVVAVAAGSSFSLAVRYDGSVW 472

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +WG    G LGHG     ++P  +  L   +AV
Sbjct: 473 SWGDNAYGQLGHGSTDASSVPLHVRELSEVVAV 505



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L++ S+ ++++ GS+L G  G G  T      T    P  + VV V+
Sbjct: 350 SGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYP---TPGRVPGLSGVVSVA 406

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   +L  G V+  GDN+S   G   T    + PR V  L GV    V AG +F+ 
Sbjct: 407 AGGGHVLALLSDGTVWAWGDNASGQLGD-GTRHSRWVPRQVPELSGVVA--VAAGSSFSL 463

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V + G N +GQLGHG T     P  +  L E   VV +AAG  + LAV  +G 
Sbjct: 464 AVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELSE---VVAVAAGSMHALAVRADGT 520

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 348
           V+ +G      LG G   + +  R     +  G+  +V V+A   H +A+ + G V+ WG
Sbjct: 521 VWGWGFNDYGQLGDG--FEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWG 578

Query: 349 KGYCGALGHGDEIDKTLP 366
                 LG G    + +P
Sbjct: 579 NNTDSELGDGTTTRRLVP 596



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 128/272 (47%), Gaps = 18/272 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L + S+ SV++ G++  G LG  PE    V + R+   S   VV V+
Sbjct: 198 SGVVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPW-RVEDVSG--VVAVA 254

Query: 170 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           A + H+  V   G V+  GDN       G  + N   + P+ V  L GV    V+AG   
Sbjct: 255 AGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSR-WLPKQVPGLGGVVA--VSAGFYH 311

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +   G V   G+N +GQLG G      +P  +     V   V +AAG  + L V  +
Sbjct: 312 SLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVL---GVSGAVAVAAGYRHSLVVNSD 368

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYT 346
           G ++++GS  +     G++ D    R     R  G+  VV V+AG  HV+AL S G V+ 
Sbjct: 369 GTLWAWGSNLD-----GQRGDGTLTRYPTPGRVPGLSGVVSVAAGGGHVLALLSDGTVWA 423

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           WG    G LG G    + +P  +  L   +AV
Sbjct: 424 WGDNASGQLGDGTRHSRWVPRQVPELSGVVAV 455



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 127/289 (43%), Gaps = 30/289 (10%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           + V   S +V  +AG+      RY      + SV+S G +  G LGHG      V    +
Sbjct: 444 RQVPELSGVVAVAAGSSFSLAVRY------DGSVWSWGDNAYGQLGHGSTDASSVP---L 494

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    + VV V+A   HA  V   G V+  G  D      G    +   + P  V  L G
Sbjct: 495 HVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSG 554

Query: 216 VPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVV 272
           +    V+   +F   L +R  G V   G+NT  +LG G T  R  P  + AP    G+V 
Sbjct: 555 M----VSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAP----GTVA 606

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            ++AG +Y +A+  +G ++++G+  NF   LG G       P  +Q   R       ++A
Sbjct: 607 LLSAGYNYSMAMRADGSLWAWGT--NFAGQLGDGSTTSRAVPVRVQGPVRAST----LAA 660

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  H +A+ S G+++ WG  + G LG G      LP  +  +   +AV 
Sbjct: 661 GQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSGVVAVD 709



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 9/150 (6%)

Query: 231 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           L +R  G V T G N HGQLG G TL R TP  +  L     V  +AAG  + LA+  +G
Sbjct: 61  LAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLS---GVAAVAAGHGHSLALRYDG 117

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G+ +   LG   + +   P  +Q     G  VV V AGD H +A+ S G V+ WG
Sbjct: 118 TVWAWGNNAYGQLGDDTRDNRTVP--VQVTGLSG--VVSVVAGDTHSLAVRSDGSVWAWG 173

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           +   G LG G   D+ +P  ++ L   ++V
Sbjct: 174 RNTSGQLGDGTRDDRAVPVQVTGLSGVVSV 203



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 92/205 (44%), Gaps = 10/205 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V   G V+T G N     G   T      P  V+ L GV    V AG   +  L  
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGD-GTTLSRRTPVQVQGLSGVAA--VAAGHGHSLALRY 115

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G+N +GQLG     +R  P  +  L     VV + AG ++ LAV  +G V+++
Sbjct: 116 DGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLS---GVVSVVAGDTHSLAVRSDGSVWAW 172

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G  ++  LG G + D   P  +Q     G  VV V+AG  H +A+ S G V+ WG    G
Sbjct: 173 GRNTSGQLGDGTRDDRAVP--VQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASG 228

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAV 378
            LG   E    +P  +  +   +AV
Sbjct: 229 QLGGAPEAAYPVPWRVEDVSGVVAV 253


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 22/267 (8%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L+ +  + S G +  G LG+G +    +  +R     +  ++ V+    
Sbjct: 48  QVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRY 107

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGL 225
           H+A +  +G VFT G   +   GH D           E  + +PC+        ++  G 
Sbjct: 108 HSAALDVNGTVFTWGGGKNGRLGHND-----------EQTRTIPCRITHLPRAHKIFCGY 156

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           + T  +T  G ++T G   HGQLG G   D   PK +   +   ++ Q+A G  + L  T
Sbjct: 157 HITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRT 215

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G VY++GS     LG G +++E+    +      G+ V  V+AGD H  A+ ++G ++
Sbjct: 216 ESGDVYTWGSNEFGQLGIG-RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLF 274

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSL 372
           TWG G  G  GHGD  D  +P  + SL
Sbjct: 275 TWGCGAEGQCGHGDYNDCDMPFLVESL 301



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 5/202 (2%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           S  ++T G   ++  G R T     +P L++  +    +QV  G   T  L   G +H+ 
Sbjct: 9   SSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSF 68

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N +GQLG+G  +D P   S         ++ +A G  +  A+  NG V+++G G N  
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGR 128

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGH ++     P  I    R      ++  G  H+ A  +   +YTWG G  G LG G  
Sbjct: 129 LGHNDEQTRTIPCRITHLPR----AHKIFCG-YHITAAITDDGLYTWGWGEHGQLGQGSL 183

Query: 361 IDKTLPEPLSSLKSHLAVQGLS 382
            D   P+ +    ++LA+  L+
Sbjct: 184 EDSYGPKKVIFDDANLAISQLA 205



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 9/272 (3%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           ++ S DI   S   + +  GRYH+  +  N +VF+ G    G LGH  E T+ +     +
Sbjct: 86  LDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITH 145

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            P A  +        H    +    ++T G       G           +++     +  
Sbjct: 146 LPRAHKIF----CGYHITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAI 201

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAG 277
            Q+  G       T  G V+T GSN  GQLG G   +   +P  +  L  +  V  +AAG
Sbjct: 202 SQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGM-MVTFVAAG 260

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  AVT  G ++++G G+    GHG+ +D   P  +++    G+ +++V  G    VA
Sbjct: 261 DRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESL--VGVFILKVFCGHNFTVA 318

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L     +Y +G    G LG G +     P  L
Sbjct: 319 LSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKL 350


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 117/257 (45%), Gaps = 21/257 (8%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DI+  SAG      G Y   L S+ SV + G++  G LG+G  T Q    T+I+  S  
Sbjct: 260 TDIIAISAG------GEYSIALSSDGSVLTWGANSDGQLGNG-NTDQNSVPTKIS--SLP 310

Query: 164 HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            +  +SA E H+  V + G V+  G  D      G +  + P+  P  V+ L  +    V
Sbjct: 311 LMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDI--DAV 368

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG  F+  L I G V   G N  GQLG G   +  TP  +  L ++ +V   A G  + 
Sbjct: 369 CAGATFSLALGIDGRVWAWGLNDEGQLGDGTNTNSTTPVEVTNLAKISAV---ACGSDHS 425

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+  NG V S+G      LG G       P  +         +V V+AG+ H +A+ S 
Sbjct: 426 LAIR-NGKVKSWGLNDEGQLGDGSTRSSSAPLDVTGLS----DIVYVAAGESHSLAITSK 480

Query: 342 GYVYTWGKGYCGALGHG 358
           G +Y WG    G LG G
Sbjct: 481 GNIYVWGLNGDGQLGDG 497



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 10/179 (5%)

Query: 202 RPIFRPRL--------VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
           +P F PR              GV   Q++ G + +  L   G +   G N  GQLG G  
Sbjct: 133 QPGFSPRPRPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTN 192

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
             + TP ++  +  + ++  +  G  + +A+   G V+++G   +  LG G   +     
Sbjct: 193 DSQTTPVAVQ-INALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSN-V 250

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +         ++ +SAG E+ +AL S G V TWG    G LG+G+    ++P  +SSL
Sbjct: 251 PVPVPVPNLTDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSL 309


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLAYVSDLGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G   D+ +P P+         L+SH + + L ++A
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIA 365



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375

Query: 349 K 349
           K
Sbjct: 376 K 376


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 311 IACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLP-KRVSGPLEGLQVLSVACG 369

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A  + SG+VFT GD +    GH +     + P+ VE+L G    +V  G+      
Sbjct: 370 SWHSALAMSSGKVFTFGDGTFGALGHGNRENVAY-PKEVESLSGFRTMKVACGVWHSAAI 428

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               + TG   +   + T G     +LGHGD   R  P  +  L +  +  Q+A G S  
Sbjct: 429 VETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVD-NNFHQVACGYSMT 487

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS +   LG+  + D  QP  +Q      + V  +S G  HV  L S 
Sbjct: 488 IALATSGHVFTMGSSNYGQLGN-PKADGKQPCQVQDKLSSEL-VEEISCGSYHVAVLTSR 545

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 546 SEVYTWGMGANGRLGHGGIEDKKKPTIVDALK 577



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+S    H A   + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 256 VQQISCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDEDISRPKLVESLAVSNVEYIACG 314

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG       PK ++ PLE +  V+ +A G  + 
Sbjct: 315 EFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGL-QVLSVACGSWHS 373

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
                +G V++FG G+   LGHG + +   P+ +++    G   ++V+ G  H  A+   
Sbjct: 374 ALAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESL--SGFRTMKVACGVWHSAAIVET 431

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    S  ++TWG G    LGHGD+  + +P  + +L
Sbjct: 432 TSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQAL 472



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           +S+  C   D    +  P+ +E+   +  +Q++ G       T +G V T G    G+LG
Sbjct: 232 SSNLVCSKTD----VLIPKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLG 287

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G GS     LGHG   
Sbjct: 288 HGTDEDISRPKLVESL-AVSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGA 346

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P+ + +   +G+ V+ V+ G  H     SSG V+T+G G  GALGHG+  +   P+
Sbjct: 347 SHWLPKRV-SGPLEGLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHGNRENVAYPK 405

Query: 368 PLSSL 372
            + SL
Sbjct: 406 EVESL 410



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 18/230 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L +S+  VF+ G    G LGHG    + V++ + +   S    ++V+  
Sbjct: 364 LSVACGSWHSALAMSSGKVFTFGDGTFGALGHG--NRENVAYPKEVESLSGFRTMKVACG 421

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A +++          S ++FT GD      GH D    +  P +V+AL      QV
Sbjct: 422 VWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLV-PTVVQALVDNNFHQV 480

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  L   GHV T GS+ +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 481 ACGYSMTIALATSGHVFTMGSSNYGQLGNPKA-DGKQPCQVQDKLSSELVEEISCGSYHV 539

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
             +T    VY++G G+N  LGHG   D+ +P  +   + +  HV  ++ G
Sbjct: 540 AVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDR--HVKSIACG 587



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 11/129 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V QI+ G  ++   T  G V+++G      LGHG   D  +P+ +++    
Sbjct: 247 PLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVS 306

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +  +  + G+ H  A+ +SG +Y WG G    G LGHG      LP+ +S       ++
Sbjct: 307 NVEYI--ACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSG-----PLE 359

Query: 380 GLSVLAEVC 388
           GL VL+  C
Sbjct: 360 GLQVLSVAC 368



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V+ S GS +  C     + D L P+ +++     + V ++S G  H+ 
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVC----SKTDVLIPKPLES--DVVLDVQQISCGSRHIA 267

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                G V+TWG+   G LGHG + D + P+ + SL
Sbjct: 268 LTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESL 303


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P+ VE L GVP  Q++AG
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G+V++ G N  GQLG G T     P  I  L+    V  +A G S+   +
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDN-QQVEFLACGGSHTALL 269

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G+V++FG+G    LGH    +EL+PR +      G  V +++ G  H +A  S  G 
Sbjct: 270 TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTEL--AGNRVTQIACGRRHTLAYVSDLGK 327

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           V+++G G  G LG+G   ++ +P P+ 
Sbjct: 328 VFSFGSGKEGQLGNGGTHNQLIPLPMK 354



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 4/146 (2%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N HGQLG G      PTP+++  L  V  +VQI+AG ++ +A++ +G VYS+
Sbjct: 168 GELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGV-PLVQISAGKAHSMALSMSGNVYSW 226

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G    E  P  I+T   + +  +  + G  H   L + G V+T+G G  G
Sbjct: 227 GRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFL--ACGGSHTALLTTDGLVFTFGAGKYG 284

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGH    ++  P  ++ L  +   Q
Sbjct: 285 QLGHNSTQNELRPRLVTELAGNRVTQ 310



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRV 328
           S++QIA G  + LA++  G ++++G   +  LG G     +  P+A++     G+ +V++
Sbjct: 150 SIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHL--SGVPLVQI 207

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           SAG  H +AL  SG VY+WG+   G LG G    +  P  + +L + 
Sbjct: 208 SAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQ 254


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 230
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ GD HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGDHHVAVLTSR 542

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTCVEALR 574



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 429 MGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSL 469



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGDHH 535

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDR--HVKSLSCGSN----FTS 589

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 4/193 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G               +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFL-ALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 360 EIDKTLPEPLSSL 372
               + P+ + SL
Sbjct: 395 RESVSYPKEVQSL 407


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 23/291 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 211 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 270

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 271 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 329

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 330 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 388

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 389 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 446

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
             V+TWGKG  G LGHGD  D+ +P  + +LK     H+A  G +  A +C
Sbjct: 447 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIAC-GANFTAAIC 496



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 156 VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 214

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 215 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 274

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 275 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 332

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 333 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 373



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 8/209 (3%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 135 RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 194

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 195 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 253

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSS 371
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS 
Sbjct: 254 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 312

Query: 372 LKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
           LK+     G+   A +   IV   + S S
Sbjct: 313 LKTIAVACGVWHTAAIVEVIVTHSSSSVS 341



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 131 DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 190

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 191 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 248

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P+ +S      A+ GL V    C T
Sbjct: 249 WIPKRISG-----ALDGLPVAYVSCGT 270


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   V+ IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 277 TPVVVEKDRI 286



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 3/202 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N S C G  D    I  PR +++L G     ++ G      L 
Sbjct: 32  NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 90

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 91  TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 150

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + V+ ++ G    +A+  +G VY WG   
Sbjct: 151 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNG 209

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LG G   ++  P  +++L+
Sbjct: 210 NGQLGLGSSGNQPTPCRVAALQ 231



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 66

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T +G V+++G  +   LG+G  +  L P  I T 
Sbjct: 67  RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 123

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V+ V+ G  H + L S G V+ WG    G +G G   ++ +P  ++    +  V
Sbjct: 124 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 183

Query: 379 QGLS 382
             ++
Sbjct: 184 MNIA 187


>gi|408501212|ref|YP_006865131.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
 gi|408466036|gb|AFU71565.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
          Length = 1186

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 26/268 (9%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
            +Q++ G YH+L I S+   ++ G S  G LG+   T       R+  PS+          
Sbjct: 736  VQVSGGYYHSLAIGSDGYAYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKA 795

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVT 222
            +QVSA  +H+  V   G  +  G N S   G   +     P+   +  +A       QV+
Sbjct: 796  IQVSAGGDHSLAVGSDGNAYAWGSNGSGQLGDGTYTTRTTPVKVSKPADAPTNFTYVQVS 855

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-----TPKSIAPLEEVGSVVQIAAG 277
             G N +  +   G+ + CG NT+G+LG G +  R      +  + AP + +   +QI+AG
Sbjct: 856  GGYNDSLAIDSDGNAYGCGDNTYGKLGDGTSTSRAMLVKVSKPADAPTDFI--YMQISAG 913

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ----HDELQPR----AIQTFRRKGIHVVRVS 329
              + LAV  +G  Y++G   +  LG+       H  +  R    +  T   KG+   +VS
Sbjct: 914  AGHSLAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDENKGLKATQVS 973

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGH 357
             G +H +A+ S GYVY WG    G LG+
Sbjct: 974  GGGDHSLAVGSDGYVYAWGINNYGQLGN 1001



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 32/284 (11%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 168
            +Q++ G  H+L + S+ + ++ GS+  G LG G  TT+     +++ P+ A      VQV
Sbjct: 796  IQVSAGGDHSLAVGSDGNAYAWGSNGSGQLGDGTYTTRTTPV-KVSKPADAPTNFTYVQV 854

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK------QVT 222
            S   N +  +   G  + CGDN+    G   +     R  LV+  K           Q++
Sbjct: 855  SGGYNDSLAIDSDGNAYGCGDNTYGKLGDGTSTS---RAMLVKVSKPADAPTDFIYMQIS 911

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVG-SVVQ 273
            AG   +  +   G+ +  G +  GQLG        H     R    S    E  G    Q
Sbjct: 912  AGAGHSLAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDENKGLKATQ 971

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHV 325
            ++ G  + LAV  +G VY++G  +   LG+              ++  A      KG+  
Sbjct: 972  VSGGGDHSLAVGSDGYVYAWGINNYGQLGNNTTSGSTANPVPVHVRDPANSADTSKGLQA 1031

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             +V  G +  +A+ S G  Y WG    G LG+     K +P P+
Sbjct: 1032 TQVKVGYDFSLAMGSDGNAYAWGANGNGQLGNDTTNTKLVPVPV 1075



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-----SVVQIAAGPSYMLAVTGNGV 289
           G+ +  G N +GQLG G T  R TP  ++  + VG     + VQ++ G  + LA+  +G 
Sbjct: 696 GNAYAWGYNRYGQLGDGTTTTRTTPVKVS--KPVGAPTDFTYVQVSGGYYHSLAIGSDGY 753

Query: 290 VYSFGS------GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            Y++G       G+N    +      ++  +  T + KG+  ++VSAG +H +A+ S G 
Sbjct: 754 AYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKAIQVSAGGDHSLAVGSDGN 813

Query: 344 VYTWGKGYCGALGHGDEIDKTLP 366
            Y WG    G LG G    +T P
Sbjct: 814 AYAWGSNGSGQLGDGTYTTRTTP 836


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 8/239 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI TG +HTL L S+  V SCGS+    LG    TT+    T +       +VQV   + 
Sbjct: 55  QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTALQ---CLRIVQVCCGQQ 111

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + ++GQV+  G NS    G+ +       PR V+ L      Q+  G N    L  
Sbjct: 112 HSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N +GQLG G T+  P    +     +G  + QIA G ++ + ++ +GV++ 
Sbjct: 172 NGALYAWGDNGNGQLGIG-TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFV 230

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +GS     LG  +  D   P  ++T R++  HV  ++AG  H  AL + G V+T+G  +
Sbjct: 231 WGSNRFGQLGLSDNKDRAFPTLLKTLRQQ--HVKFIAAGGAHSAALTAHGGVFTFGWSF 287



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 13/246 (5%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G      V   R I       V Q++   +H   +   G+V +CG N   
Sbjct: 22  GNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHD 81

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             G   +     +P  V AL+ +   QV  G   +  LT  G V+  GSN+ GQLG+G+ 
Sbjct: 82  QLGQEVSTT---KPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEG 138

Query: 254 LD-RPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            + R +P   K++AP     +VVQIA G ++ LA+  NG +Y++G   N  LG G    E
Sbjct: 139 QESRLSPRFVKTLAPF----TVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTV-GE 193

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            Q   ++     G+ + +++ G  H + L  SG ++ WG    G LG  D  D+  P  L
Sbjct: 194 PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLL 253

Query: 370 SSLKSH 375
            +L+  
Sbjct: 254 KTLRQQ 259



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 46/299 (15%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G+ H++ ++ +  V+  GS+  G LG+G      +S   +   +   VVQ++   
Sbjct: 104 VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGS 163

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +L +G ++  GDN +   G      P   P  V  L G+P  Q+  G N +  L+
Sbjct: 164 NHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G +   GSN  GQLG  D  DR  P  +  L +   V  IAAG ++  A+T +G V++
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQ-QHVKFIAAGGAHSAALTAHGGVFT 282

Query: 293 F---------------GSGSN----------------FC---------LGHGEQHDELQP 312
           F               G+ SN                FC         LGHG ++D+L P
Sbjct: 283 FGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTP 342

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
             IQ     G  + +++ G  H V    + G V+T+G G  G LG    +  T P PL+
Sbjct: 343 MKIQEL--MGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGSSVSMVST-PTPLA 398


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 17/272 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++ +   + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +
Sbjct: 27  IDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEI 83

Query: 166 VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             V+A +  +  + +SG +F  G   N    C        +  P+L++ +      QV  
Sbjct: 84  FHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVAC 139

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G      LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +  
Sbjct: 140 GAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSG 198

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            ++ +G ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTR 255

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +G V++WG G  G LGH    + T P+ +  L
Sbjct: 256 NGGVFSWGHGGNGQLGHNSMANVTQPKKIMEL 287



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 4/203 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQV+    H   + + G + + G N+    G   +      P ++ +L   P  Q+ AG
Sbjct: 134 VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAG 193

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +G L+  G + T G N  GQLGHG++   + +P+ +  L     VV +A G  + + 
Sbjct: 194 AYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRH-QEVVFVAMGEEHSVC 252

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            T NG V+S+G G N  LGH    +  QP+ I      G  V ++  G  H ++L     
Sbjct: 253 RTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELM--GTTVCQICCGRRHTISLTDKRK 310

Query: 344 VYTWGKGYCGALGHGDEIDKTLP 366
           +  +G      LG  ++    LP
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLP 333



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H + L    ++ S GS+  G LG G    + +  T I   +A  + Q+ A  
Sbjct: 135 VQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGA 194

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +FT G N+    GH +++     PRLV+ L+      V  G   +   T
Sbjct: 195 YHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 291
             G V + G   +GQLGH    +   PK I  +E +G+ V QI  G  + +++T    + 
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKI--MELMGTTVCQICCGRRHTISLTDKRKLL 312

Query: 292 SFGSGSNFCLG 302
            FG  SN  LG
Sbjct: 313 GFGLNSNNQLG 323



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 12/162 (7%)

Query: 237 VHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++  G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGS 57

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                L  G+Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G L
Sbjct: 58  NEFGQL--GQQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 356 GHGDEIDKTLPEP-LSSLKSHLAVQGLSVLAEVCPTIVQEDT 396
               +   +L EP L     H +V  ++  A+ C  + +E T
Sbjct: 114 MCKQD---SLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P+ VE L GVP  Q++AG
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G+V++ G N  GQLG G T     P  I  L+    V  +A G S+   +
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDN-QQVEFLACGGSHTALL 226

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G+V++FG+G    LGH    +EL+PR +      G  V +++ G  H +A  S  G 
Sbjct: 227 TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTEL--AGNRVTQIACGRRHTLAYVSDLGK 284

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS 370
           V+++G G  G LG+G   ++ +P P+ 
Sbjct: 285 VFSFGSGKEGQLGNGGTHNQLIPLPMK 311



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 4/146 (2%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N HGQLG G      PTP+++  L  V  +VQI+AG ++ +A++ +G VYS+
Sbjct: 125 GELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGV-PLVQISAGKAHSMALSMSGNVYSW 183

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G    E  P  I+T   + +  +  + G  H   L + G V+T+G G  G
Sbjct: 184 GRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFL--ACGGSHTALLTTDGLVFTFGAGKYG 241

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGH    ++  P  ++ L  +   Q
Sbjct: 242 QLGHNSTQNELRPRLVTELAGNRVTQ 267



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRV 328
           S++QIA G  + LA++  G ++++G   +  LG G     +  P+A++     G+ +V++
Sbjct: 107 SIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHL--SGVPLVQI 164

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           SAG  H +AL  SG VY+WG+   G LG G    +  P  + +L + 
Sbjct: 165 SAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQ 211


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + N     P+L++AL+G     +  G 
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKN-GCDHPQLIDALQGKEIVDIACGG 4116

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYML 282
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L  +G  V+ IA  +G +  L
Sbjct: 4117 AHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETL--IGFKVIDIACGSGDAQTL 4174

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG
Sbjct: 4175 CITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVVKVECGSQFSVALTRSG 4232

Query: 343  YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWGKG    LGHG +     P+ +++L+
Sbjct: 4233 SVYTWGKGDYHRLGHGSDEHVRHPKKIAALQ 4263



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S +  V+S G    G LGHG +   C   
Sbjct: 4046 LLESIQH------IFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNG-CDHP 4098

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I+      +V ++    H+A V   G+++T G       GH D+   + +P+LVE L 
Sbjct: 4099 QLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQM-KPKLVETLI 4157

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     +  G      L I    +V + G   +G+LG G +     P  I  L  +G VV
Sbjct: 4158 GFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VV 4216

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG       P+ I     +G  ++ ++ G 
Sbjct: 4217 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAAL--QGKKIICIATGS 4274

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHG 358
             H VA    G V+TWG    G LG G
Sbjct: 4275 LHCVACSDLGEVFTWGDNDEGQLGDG 4300



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 110/249 (44%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGH        P+  + +   RI          ++  
Sbjct: 3081 GKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--------DIACG 3132

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  +G++FT G       GH D N    RP+LV+AL G    QV  G     T 
Sbjct: 3133 SSHSAAISSTGELFTWGLGEYGRLGHGD-NLTQLRPKLVKALLGHHIVQVACGSRDAQTL 3191

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V + G    G+LG G +     P +I  L  +G V  I  G  + LA+T  G 
Sbjct: 3192 ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLG-VCMIECGAQFSLALTKFGQ 3250

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G  F LGHG      +P  +++   K I  V V+ G  H +     G VY WG 
Sbjct: 3251 VYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKI--VHVAVGALHCLCATDQGQVYAWGD 3308

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3309 NDHGQQGNG 3317



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 5/230 (2%)

Query: 152  VSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
            VSF   ++     V  +S + +H+     S  +VF  G N     G    ++ +  P   
Sbjct: 2954 VSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSK-VKVPVYS 3012

Query: 211  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VG 269
            E+L  +    +  G      ++  G ++ CG  T+G+LG G + +  TP  +  L + V 
Sbjct: 3013 ESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVI 3072

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
              V + +G  + +A+T +G V+S+G G +  LGH  +    +P+ I+  + K I    ++
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--DIA 3130

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G  H  A+ S+G ++TWG G  G LGHGD + +  P+ + +L  H  VQ
Sbjct: 3131 CGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQ 3180



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++   L  +  V+S G+   G LGHG   ++    T+I      +V+ +S    ++A V
Sbjct: 530 GKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQP-TKITELVGKNVIHISCGATYSAAV 588

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 236
             SG+V+T G  +    GH  T+     P LV  LK      +  G      L +   G 
Sbjct: 589 TSSGEVYTWGRGNYGRLGH-GTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGL 647

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G +    TPK I  L+++  V ++  G  + LA+T +G VY++G G
Sbjct: 648 VFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDI-EVARVYCGSQFSLALTKSGSVYTWGKG 706

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            N  LGHG ++    P+ ++    K I  V V +G  HV+AL   G VY WG+   G +G
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRNDNGQVG 764

Query: 357 HGDEIDKTLPEPLSSLK 373
              E + + P  L+ L+
Sbjct: 765 ETSETNVSEPTLLTLLQ 781



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 6/205 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H+  +   G V++ G+      GH D N    +P  +  L G     ++ G  ++ 
Sbjct: 528 ADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRD-QPTKITELVGKNVIHISCGATYSA 586

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 287
            +T  G V+T G   +G+LGHG + D   P  +  L++   +V IA  +G +  LAVT  
Sbjct: 587 AVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDY-FIVDIACGSGDAQTLAVTNT 645

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+V+S+G G    LG G       P+ I+    + I V RV  G +  +AL  SG VYTW
Sbjct: 646 GLVFSWGDGGYGKLGTGGSDGSKTPKLIEKL--QDIEVARVYCGSQFSLALTKSGSVYTW 703

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSL 372
           GKG    LGHG E     P+ +  L
Sbjct: 704 GKGDNHRLGHGSENHVRFPKLVEGL 728



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 8/216 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ+   E     V   G+V+  G  +    G   T+  I  P L+E+++ +  K+
Sbjct: 3999 SALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDT-ILTPTLLESIQHIFIKK 4057

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L+    +V IA G 
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQG-KEIVDIACGG 4116

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVV 336
            ++  AVT  G +Y++G G    LGHG+  D+++P+ ++T    G  V+ ++  +GD   +
Sbjct: 4117 AHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETL--IGFKVIDIACGSGDAQTL 4174

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +     V++WG G  G LG G      +P  + SL
Sbjct: 4175 CITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL 4210



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            +A   + ++        V   G+++ CG+  N     GH +    +  P  + +L     
Sbjct: 3016 TALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNN---VATPCQLTSLNQYVI 3072

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH + L    PK I  L+    +  IA 
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKS-KRIRDIAC 3131

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A++  G ++++G G    LGHG+   +L+P+ ++     G H+V+V+ G  D  
Sbjct: 3132 GSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALL--GHHIVQVACGSRDAQ 3189

Query: 335  VVALDSSGYVYTWGKGYCGALGHG 358
             +AL + G V++WG G  G LG G
Sbjct: 3190 TLALSAEGLVFSWGDGDFGKLGRG 3213



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 15/174 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+  ++++ +  KQ+     +   LT+ G V+    ++  Q           P+ I   +
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQ----------CPEQIEGFD 517

Query: 267 --EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             E+  +   A G  + LA++ +G VYS+G+G    LGHG+ +   QP  I      G +
Sbjct: 518 GKEISKLAAHADG-KHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITEL--VGKN 574

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ +S G  +  A+ SSG VYTWG+G  G LGHG   D T+P  +  LK +  V
Sbjct: 575 VIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIV 628



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)

Query: 137 SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
           S C  LG  P++  C S   +       V Q+  +E     +  +G+V+    +S   C 
Sbjct: 459 SSCHDLGTSPQS--CDSIRELG------VKQIVCAERWLLILTLTGKVYIMYYSSETQC- 509

Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
                     P  +E   G    ++ A  +   +  L+  G V++ G+   G+LGHGD  
Sbjct: 510 ----------PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNN 559

Query: 255 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
            R  P  I  L  VG +V+ I+ G +Y  AVT +G VY++G G+   LGHG   D   P 
Sbjct: 560 SRDQPTKITEL--VGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPT 617

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            +   +   I  +   +GD   +A+ ++G V++WG
Sbjct: 618 LVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWG 652



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   +LAVT +G VY+ G
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPV-QLVGGEQTLLAVTSDGKVYATG 4026

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G     L P  +++ +   I  V V++G +H +AL + G VY+WG+G  G 
Sbjct: 4027 YGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGK 4086

Query: 355  LGHGDEIDKTLPEPLSSLK 373
            LGHG++     P+ + +L+
Sbjct: 4087 LGHGNKNGCDHPQLIDALQ 4105



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V  +      +  + + GQV+T G  
Sbjct: 3199 VFSWGDGDFGKLGRGG-SEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKG 3257

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  +++ + +P LVE+L       V  G       T +G V+  G N HGQ G+
Sbjct: 3258 DYFRLGH-GSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGN 3316

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G  L    P  +  LE V  V ++A G S+ +A T
Sbjct: 3317 GTILVNRKPSLVLNLEGV-RVNRVACGSSHSIAWT 3350


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLAYVSDLGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G   D+ +P P+         L+SH + + L ++A
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIA 365



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSTALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375

Query: 349 K 349
           K
Sbjct: 376 K 376


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 23/291 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
             V+TWGKG  G LGHGD  D+ +P  + +LK     H+A  G +  A +C
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIAC-GANFTAAIC 419



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 8/209 (3%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSS 371
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS 
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 372 LKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
           LK+     G+   A +   IV   + S S
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVS 264



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKSI----APLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P+ +S      A+ GL V    C T
Sbjct: 172 WIPKRISG-----ALDGLPVAYVSCGT 193


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 27/288 (9%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           A    I  G+Y T ++ S+ +V +CG    G LG G    Q  +  ++NF     + ++S
Sbjct: 408 ANAQTIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQ-TTLKKLNFDHRYVIRKIS 466

Query: 170 AS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +S   + H   +   G+VF+ GD      GH +++   +  ++  AL+G   K ++AG  
Sbjct: 467 SSKGSDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYR 526

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR---------PTPKSIAPLEEVGSVV-QIAA 276
            +  +T  G + T G   +G+LGHGD+  +           PK I  L  VG  + ++  
Sbjct: 527 HSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEAL--VGLYIRKVCC 584

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G    LA+T  G ++++G G+  CLG G  +   L+P+ ++        +V V+ GD H 
Sbjct: 585 GSQSSLALTSTGQLFAWGCGA--CLGCGSPESTALRPKLVEEL--ANTRIVDVACGDSHC 640

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           +AL     VY WG    G  G G         P++  K  + + G++V
Sbjct: 641 LALTHDNEVYAWGNNAMGQCGQGHS-----QSPITKPKKVVGLDGVTV 683



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 9/203 (4%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PS   +   S  EN    V ++ +V+  G NSS       +   I +P+L  A      +
Sbjct: 356 PSPVPIDDSSTGEN-GNMVTENSEVYVWGSNSSHQLAE-GSQEKILQPKLSPAFANA--Q 411

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            + AG   T  +   G V  CG  ++G+LG GD+ ++ T K +   +    + +I++   
Sbjct: 412 TIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLN-FDHRYVIRKISSSKG 470

Query: 280 ---YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + LA+T +G V+S+G G    LGHG    +  P+ IQ    +G  V  +SAG  H  
Sbjct: 471 SDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQG-ALQGKVVKSISAGYRHSA 529

Query: 337 ALDSSGYVYTWGKGYCGALGHGD 359
           A+   G ++TWG+G  G LGHGD
Sbjct: 530 AVTEDGELFTWGEGDYGRLGHGD 552



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 18/248 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +TG    ++  NS V+  GS+    L  G +  + +   +++ P+ A+   + A +    
Sbjct: 365 STGENGNMVTENSEVYVWGSNSSHQLAEGSQ--EKILQPKLS-PAFANAQTIEAGQYCTF 421

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTI 233
            V   G V  CG  S    G  D+N      +L    + V  +++++     G    LT 
Sbjct: 422 VVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYV-IRKISSSKGSDGHTLALTA 480

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LGHG++  +  PK I    +   V  I+AG  +  AVT +G ++++
Sbjct: 481 DGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTW 540

Query: 294 GSG---------SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G         SN  LGHG+ +   +P+ I+     G+++ +V  G +  +AL S+G +
Sbjct: 541 GEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEAL--VGLYIRKVCCGSQSSLALTSTGQL 598

Query: 345 YTWGKGYC 352
           + WG G C
Sbjct: 599 FAWGCGAC 606



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 5/155 (3%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           VP    + G N    +T    V+  GSN+  QL  G       PK ++P     +   I 
Sbjct: 359 VPIDDSSTGEN-GNMVTENSEVYVWGSNSSHQLAEGSQEKILQPK-LSP--AFANAQTIE 414

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEH 334
           AG      V  +G V + G GS   LG G+ +++   + +    R  I  +  S G D H
Sbjct: 415 AGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGH 474

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            +AL + G V++WG G  G LGHG+   +  P+ +
Sbjct: 475 TLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQI 509



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   +F+ G   C  LG G   +  +    +   +   +V V+  ++H   +    +V
Sbjct: 592 LTSTGQLFAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEV 649

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIR 234
           +  G+N+   CG   +  PI +P+ V  L GV   Q++AG    L +T   T R
Sbjct: 650 YAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWTALPTDR 703


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLAYVSDLGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G   D+ +P P+         L+SH + + L ++A
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIA 365



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375

Query: 349 K 349
           K
Sbjct: 376 K 376


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 27/275 (9%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G YHTL +  S SV+S G +  G LG G +         +       VV V+A  
Sbjct: 91  VALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGM 150

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFR------PRLVEALKGVPCKQVTAGL 225
            H+  +   G+V++ G+ ++   GH   T R +F       PRLV A + +  +QV+AG 
Sbjct: 151 EHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQ 210

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  ++  G     G     QLG G   D   P  + PL+  GS   +A G  + LA+ 
Sbjct: 211 MHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLK--GSTAAVACGSLHSLALQ 268

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             G V ++G+  N  LG G +  + QP+  +  +  G+   +++AG +H  A+  SG +Y
Sbjct: 269 YGGHVLAWGTNQNGVLGQGHEKQQ-QPK--RPSKVPGVSAEQIAAGWKHSAAVTGSGKLY 325

Query: 346 TWG--------------KGYCGALGHGDEIDKTLP 366
           TWG               G  G LGHG++ D   P
Sbjct: 326 TWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSP 360



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 114/257 (44%), Gaps = 22/257 (8%)

Query: 135 GSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           G+  CG LGH      E    V    +  P  A    V+    H A V  SG V+T G N
Sbjct: 9   GNGDCGRLGHSLEYASEELPRVVRALLGVPLKA----VACGGAHTAAVDDSGTVYTWGLN 64

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH   +  +  P  V   + V    ++AG   T  +   G V + G N  GQLG 
Sbjct: 65  DKGQLGHDSEDSEVGLPGEVAMPERVVA--LSAGYYHTLCVGESGSVWSFGCNGKGQLGL 122

Query: 251 G-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 308
           G D +    P+ +  L++   VV +AAG  + LA+T  G VYS+G+ +N  LGHG     
Sbjct: 123 GKDVVLVREPRLVKSLQD-NKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPR 181

Query: 309 -------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                  E  PR ++ F  + + V +VSAG  H  A+ ++G  + WG G    LG G + 
Sbjct: 182 RLFGSSIEFLPRLVRAF--EALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDE 239

Query: 362 DKTLPEPLSSLKSHLAV 378
           D   P  L  LK   A 
Sbjct: 240 DLAGPTVLPPLKGSTAA 256


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   V+ IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 TPVVVEKDRI 310



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 3/202 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N S C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + V+ ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNG 233

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LG G   ++  P  +++L+
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQ 255



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T +G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V+ V+ G  H + L S G V+ WG    G +G G   ++ +P  ++    +  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 379 QGLS 382
             ++
Sbjct: 208 MNIA 211


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLAYVSDLGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G   D+ +P P+         L+SH + + L ++A
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIA 365



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375

Query: 349 K 349
           K
Sbjct: 376 K 376


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 73  NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 131

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 132 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 191

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   V+ IA G    +AV   G VY +G   N  LG G  
Sbjct: 192 QVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 251

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 252 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 309

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 310 TPVVVEKDRI 319



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 3/202 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N S C G  D    I  PR +++L G     ++ G      L 
Sbjct: 65  NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 123

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 124 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 183

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + V+ ++ G    +A+  +G VY WG   
Sbjct: 184 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNG 242

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LG G   ++  P  +++L+
Sbjct: 243 NGQLGLGSSGNQPTPCRVAALQ 264



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 41  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 99

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T +G V+++G  +   LG+G  +  L P  I T 
Sbjct: 100 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 156

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V+ V+ G  H + L S G V+ WG    G +G G   ++ +P  ++    +  V
Sbjct: 157 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 216

Query: 379 QGLS 382
             ++
Sbjct: 217 MNIA 220


>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
 gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
          Length = 1019

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 130/266 (48%), Gaps = 16/266 (6%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +SA  +QI+ GR HT+ +++   VF+ GS+  G LG   + T   +  R+       +VQ
Sbjct: 92  SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIVQ 149

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V++  NH   + + G+VF  G+ +   C HR        P  VE L GVP  +V AG   
Sbjct: 150 VASGSNHCIALDEGGRVFVWGEQADGRCIHR--------PEPVEQLSGVPIVRVLAGARH 201

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              L+  G V T G N  G+LG  D   + + + +  ++ +G VV+ A G ++ + +T  
Sbjct: 202 CLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTHC 260

Query: 288 GVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           G  +SFGS +    G G++      P A+      G HV R++AG  H +A+   G  Y 
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDL--IGSHVTRIAAGACHTIAI-CKGAPYP 317

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
           +G    G LG+G  + ++ P     L
Sbjct: 318 FGLNSSGQLGNGKIMTQSTPRKTDEL 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 21/226 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+  E H  F+ + G++++ G N     G        F    V         Q++AG
Sbjct: 43  VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +T  G V   GSN HGQLG       + TP+ +   +E+  +VQ+A+G ++ +A
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIA 159

Query: 284 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +   G V+ +G  ++  C+   E  ++L           G+ +VRV AG  H +AL +SG
Sbjct: 160 LDEGGRVFVWGEQADGRCIHRPEPVEQL----------SGVPIVRVLAGARHCLALSASG 209

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            V+TWG+   G LG    ID   P+  +S++    + GL V+   C
Sbjct: 210 AVFTWGQNNSGELG----IDDLRPQ--TSVQHVHQMDGLGVVEAAC 249



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 5/173 (2%)

Query: 102 HSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           H  + VE  +G   +++  G  H L +S S +VF+ G +  G LG      Q  S   ++
Sbjct: 179 HRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQ-TSVQHVH 237

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                 VV+ +  +NH   +   G+ F+ G ++   CG          P  V  L G   
Sbjct: 238 QMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHV 297

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            ++ AG   T     +G  +  G N+ GQLG+G  + + TP+    L+ V  V
Sbjct: 298 TRIAAGACHT-IAICKGAPYPFGLNSSGQLGNGKIMTQSTPRKTDELDHVTGV 349


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 12/249 (4%)

Query: 123 TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           T  + + + +S G    G LGHG    +              V Q+   + H+  +   G
Sbjct: 98  TTAVEDGTAYSFGQGEWGKLGHGGAANEQHP---KQLEVQGKVTQIGVGDQHSVLLTDGG 154

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTC 240
            V+T G       GH  T + + RP+ VEAL        + G+ F     I   G VH+ 
Sbjct: 155 HVYTFGQGIYGQLGH-GTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSW 213

Query: 241 GSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           G      LGH    D    P+ +  L+    ++Q+AAG  + L +T +G VYS G   + 
Sbjct: 214 GRQGP-WLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDG 272

Query: 300 CLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           CLG G+  + +   P  I +       + +V+AG++H V L S G V T+G G  G LGH
Sbjct: 273 CLGQGKTVKKETANPMPITSLNN--YVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGH 330

Query: 358 GDEIDKTLP 366
           GD  ++ +P
Sbjct: 331 GDTKNQDVP 339



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP 146
           G W ++     + E     +E      QI  G  H++L+++   V++ G  + G LGHG 
Sbjct: 112 GEWGKLGHGGAANEQHPKQLEVQGKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHG- 170

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASEN---------HAAFVLQSGQVFTCGDNSSFCCGH 197
                   TR +      V  +  ++             F + +  V           GH
Sbjct: 171 --------TRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGRQGPWLGH 222

Query: 198 RDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
                 + +P+ V  LK      QV AG   T  LTI G V++ G N  G LG G T+ +
Sbjct: 223 AAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKK 282

Query: 257 PT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
            T  P  I  L     + Q+AAG  + + +  +G V +FGSGSN  LGHG+  ++  PR 
Sbjct: 283 ETANPMPITSLNNY-VITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRT 341

Query: 315 IQTFRRKGIHVVRVSAGDEHVVAL 338
           +Q    K      ++AG EH + L
Sbjct: 342 VQGVFDK---ACAIAAGFEHTIVL 362



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G  ++ G    G+LGHG   +   PK    LE  G V QI  G  + + +T  G VY+FG
Sbjct: 104 GTAYSFGQGEWGKLGHGGAANEQHPKQ---LEVQGKVTQIGVGDQHSVLLTDGGHVYTFG 160

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGHG + D  +P+ ++   R    +  +  G +   A+++ G V++WG+     
Sbjct: 161 QGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGR-QGPW 219

Query: 355 LGHGDEIDKTL-PEPLSSLKSHLAV 378
           LGH  + D    P+ +  LK+   +
Sbjct: 220 LGHAAQPDHVKQPQEVGLLKNKAKI 244


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 17/272 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++ +   + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +
Sbjct: 27  IDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEI 83

Query: 166 VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             V+A +  +  + +SG +F  G   N    C        +  P+L++ +      QV  
Sbjct: 84  FHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVAC 139

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G      LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +  
Sbjct: 140 GAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSG 198

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            ++ +G ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTR 255

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +G V++WG G  G LGH    + T P+ +  L
Sbjct: 256 NGGVFSWGHGGNGQLGHNSMANVTQPKKIMEL 287



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 4/203 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQV+    H   + + G + + G N+    G   +      P ++ +L   P  Q+ AG
Sbjct: 134 VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAG 193

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +G L+  G + T G N  GQLGHG++   + +P+ +  L     VV +A G  + + 
Sbjct: 194 AYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRH-QEVVFVAMGEEHSVC 252

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            T NG V+S+G G N  LGH    +  QP+ I      G  V ++  G  H ++L     
Sbjct: 253 RTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELM--GTTVCQICCGRRHTISLTDKRK 310

Query: 344 VYTWGKGYCGALGHGDEIDKTLP 366
           +  +G      LG  ++    LP
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLP 333



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H + L    ++ S GS+  G LG G    + +  T I   +A  + Q+ A  
Sbjct: 135 VQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGA 194

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +FT G N+    GH +++     PRLV+ L+      V  G   +   T
Sbjct: 195 YHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 291
             G V + G   +GQLGH    +   PK I  +E +G+ V QI  G  + +++T    + 
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKI--MELMGTTVCQICCGRRHTISLTDKRKLL 312

Query: 292 SFGSGSNFCLG 302
            FG  SN  LG
Sbjct: 313 GFGLNSNNQLG 323



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 14/163 (8%)

Query: 237 VHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++  G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGS 57

Query: 296 GSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 G  G+Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G 
Sbjct: 58  NE---FGQLGQQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGE 112

Query: 355 LGHGDEIDKTLPEP-LSSLKSHLAVQGLSVLAEVCPTIVQEDT 396
           L    +   +L EP L     H +V  ++  A+ C  + +E T
Sbjct: 113 LMCKQD---SLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 123/273 (45%), Gaps = 18/273 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  ++L I  +  +F+ G +  G LGH PET      +++   + A +VQ +    H
Sbjct: 44  VVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWH 103

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 227
              V   G+ +  G N    CG       DT RP+ R   +       +  +QV AG   
Sbjct: 104 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTH 163

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  GHV T G         GD     TP  +  LE+V     IA G  + LA+  +
Sbjct: 164 SVVLTREGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKV---RLIAVGAFHNLALLED 216

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+++++G+     LG G+     QP A+Q      + +V ++AG  H  AL   G VY W
Sbjct: 217 GILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSD--LTLVDIAAGGWHSTALTDDGGVYGW 274

Query: 348 GKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQ 379
           G+G  G LG GD+   K +P+ +  L     VQ
Sbjct: 275 GRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQ 307



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 35/271 (12%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++ S GS   G LG G    +      +   +A +V  V A   ++  + + G++FT G
Sbjct: 6   KAIISWGSGEDGQLGIG-NNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWG 64

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH    +    P  V+AL      Q   G      +  +G  +  G N +GQ 
Sbjct: 65  WNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 124

Query: 249 GH----GDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           G      D   RP  + I   +      SV Q+AAG ++ + +T  G V+++G       
Sbjct: 125 GEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQ------ 178

Query: 302 GHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALG 356
                     P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G LG
Sbjct: 179 -------PWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLG 231

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
            GD   ++ P         +AVQGLS L  V
Sbjct: 232 TGDTQPRSQP---------IAVQGLSDLTLV 253


>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 732

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 12/268 (4%)

Query: 110 SAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           +A + Q+  G    L + +  +V++ G +  G LG G   T  V+ T I      +V+ V
Sbjct: 43  AAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVA-TPIQVKDLTNVISV 101

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           SA   HA  +   G V+  G+N +   G  D   PI  PR VE L+ +    + AGL F+
Sbjct: 102 SAGGVHALALKADGTVWAWGNNETDQLG-VDQASPIAIPRQVEGLQNIVA--IAAGLEFS 158

Query: 229 GFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
             L+  G V   G+N + Q+ +  D +   TP+ +     +  VV+IAAG ++ LA+  +
Sbjct: 159 LALSSDGKVWAWGANEYKQINYFSDAIKIATPQIV---NNLSGVVKIAAGSAWCLALKND 215

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           G V+++G+     +G+ +Q  E+        +  GI  V+ VSAG  H +AL   G V+ 
Sbjct: 216 GTVWTWGA-QKVPMGNDDQDGEVT-NITNLTQINGISDVISVSAGYSHSLALKGDGTVWG 273

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           WG      LG  D+     P  +S LK+
Sbjct: 274 WGSNELLQLGSHDQQWFDSPVQISPLKN 301



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 10/165 (6%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEV 268
           +A       Q+ AG NF   +  +G+V   G N+ GQLG G  DT    TP  +   +++
Sbjct: 39  DARPAAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVATPIQV---KDL 95

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            +V+ ++AG  + LA+  +G V+++G+     LG  +      PR ++  +    ++V +
Sbjct: 96  TNVISVSAGGVHALALKADGTVWAWGNNETDQLGVDQASPIAIPRQVEGLQ----NIVAI 151

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEIDKTLPEPLSSL 372
           +AG E  +AL S G V+ WG      + +  D I    P+ +++L
Sbjct: 152 AAGLEFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVNNL 196



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 16/263 (6%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           + VE   +IV  +AG        +   L S+  V++ G++    + +  +  +  +   +
Sbjct: 140 RQVEGLQNIVAIAAGL------EFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIV 193

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
           N  S   VV+++A       +   G V+T G       G+ D +  +     +  + G+ 
Sbjct: 194 NNLSG--VVKIAAGSAWCLALKNDGTVWTWG-AQKVPMGNDDQDGEVTNITNLTQINGIS 250

Query: 218 -CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V+AG + +  L   G V   GSN   QLG  D     +P  I+PL+ V +V   +A
Sbjct: 251 DVISVSAGYSHSLALKGDGTVWGWGSNELLQLGSHDQQWFDSPVQISPLKNVTTV---SA 307

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G    +A+T +G V++ G      LG+G + D L   A             +SAG  +  
Sbjct: 308 GAYLTMALTNDGTVWTLGGNIYGQLGNGIKADSLPITAYPVKASNITQATSISAG--YGF 365

Query: 337 ALDSS-GYVYTWGKGYCGALGHG 358
           AL  + G V+ WG    G LG G
Sbjct: 366 ALGRALGSVWGWGDNSKGQLGAG 388



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+AAG ++ LAV   G V+++G  S   LG G    +  P A     +   +V+ VSAG 
Sbjct: 48  QLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVA--DTNPVATPIQVKDLTNVISVSAGG 105

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            H +AL + G V+ WG      LG        +P  +  L++ +A+
Sbjct: 106 VHALALKADGTVWAWGNNETDQLGVDQASPIAIPRQVEGLQNIVAI 151


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 10/222 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            P  + +V + + ++ +  V   G V+  G N     G   T      P  V+ L GV  
Sbjct: 90  LPGLSGMVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGD-GTLSTRGDPVQVQGLSGVTT 148

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             V  G   +  L   G V   G+N HGQLG G ++ R TP+ +A L+EV   V +AAG 
Sbjct: 149 --VALGATHSLALCYDGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQEV---VAVAAGA 203

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ LAV  +G V+++G   +  LG G       P  IQ        +V V++G  H +AL
Sbjct: 204 NHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQGLS----GIVAVASGTSHSLAL 259

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
              G V+ WG  Y G LG G  + ++ P  ++ L   ++V+G
Sbjct: 260 RYDGNVWAWGSNYSGQLGDGSSLSRSSPVQVTELSGIVSVEG 301



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 14/269 (5%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + I +G   ++ + S+ +V++ G +  G LG G  +T+      +     + V  V+
Sbjct: 94  SGMVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRG---DPVQVQGLSGVTTVA 150

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H+  +   G V+  G N     G   T+     P++V  L+ V    V AG N + 
Sbjct: 151 LGATHSLALCYDGSVWAWGANDHGQLGD-GTSIARRTPQMVAGLQEVVA--VAAGANHSL 207

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V   G N  GQLG G T+ R  P    P++ +  +V +A+G S+ LA+  +G 
Sbjct: 208 AVLSDGTVWAWGENYDGQLGDGTTVTRRVP---VPIQGLSGIVAVASGTSHSLALRYDGN 264

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++GS  +  LG G       P  +Q     GI  V V  G ++ +A+   G V+TWG 
Sbjct: 265 VWAWGSNYSGQLGDGSSLSRSSP--VQVTELSGI--VSVEGGPDYSMAVRYDGTVWTWGI 320

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G LG G  I +++P   S L   +AV
Sbjct: 321 NTYGQLGDGTTIARSVPVQTSGLSGVVAV 349



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 20/263 (7%)

Query: 107 VETS--AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           V+TS  +G + +  GR H L + +N+S+++ G ++ G  G    +      T +N     
Sbjct: 338 VQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTILN----- 392

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            VV ++A+ +H+  V   G ++  G N+    G   T     R    E L  V    V A
Sbjct: 393 EVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKN---RWAPAEVLGNV--VSVAA 447

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G +   GSNT GQLG G    R  P  +  +  + SV   AAG  Y +A
Sbjct: 448 GRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPMQVPGISGIASV---AAGSDYSVA 504

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +  ++++G  S   LG G   +   P  +Q        +V ++ G+ H++A+ S+G 
Sbjct: 505 LRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQGLS----GIVAIATGNGHMLAVRSNGT 560

Query: 344 VYTWGKGYCGALGHGDEIDKTLP 366
           V+ WG    G LG G  I++  P
Sbjct: 561 VWAWGDNSSGQLGDGTTINRATP 583



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 23/272 (8%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L +  +  +++ G++  G LG G    +      +      +VV V+A   H+  V  
Sbjct: 403 HSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVL-----GNVVSVAAGRRHSLAVRD 457

Query: 181 SGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            G ++  G N+    G    ++R I  P  V  + G+    V AG +++  L     +  
Sbjct: 458 DGSLWAWGSNTVGQLGDGTGSSRTI--PMQVPGISGI--ASVAAGSDYSVALRYDRTLWA 513

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N++GQLG G T++R  P  +  L     +V IA G  +MLAV  NG V+++G  S+ 
Sbjct: 514 WGENSYGQLGDGTTVNRHVPTRVQGLS---GIVAIATGNGHMLAVRSNGTVWAWGDNSSG 570

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G   +   P  +Q         V V+AG  H +A+   G ++ WG      LG G 
Sbjct: 571 QLGDGTTINRATPVQVQVLSGI----VAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGT 626

Query: 360 EIDKTLPEPLSSLKSHLAVQG-----LSVLAE 386
            I + +P  +  + S +AV       L+VLA+
Sbjct: 627 GIPRLVPTQVQGIGSAVAVSAAKHHSLAVLAD 658



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 13/212 (6%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++AS  ++  +   G V+T G       G    + P   P L   +       + +G +
Sbjct: 51  RIAASSMNSLAIRSDGTVWTVGTRYVSANGWYRQDWPGQLPGLSGMVS------IDSGDD 104

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           F+  +   G V   G N  GQLG G    R  P  +  L     V  +A G ++ LA+  
Sbjct: 105 FSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGLS---GVTTVALGATHSLALCY 161

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++G+  +  LG G       P+ +   +     VV V+AG  H +A+ S G V+ 
Sbjct: 162 DGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQ----EVVAVAAGANHSLAVLSDGTVWA 217

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           WG+ Y G LG G  + + +P P+  L   +AV
Sbjct: 218 WGENYDGQLGDGTTVTRRVPVPIQGLSGIVAV 249



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 127/312 (40%), Gaps = 64/312 (20%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GR H+L +  + S+++ GS+  G LG G  +++ +    +  P  + +  V+A  
Sbjct: 443 VSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIP---MQVPGISGIASVAAGS 499

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +++  +     ++  G+NS    G   T NR +  P  V+ L G+       G      L
Sbjct: 500 DYSVALRYDRTLWAWGENSYGQLGDGTTVNRHV--PTRVQGLSGIVAIATGNGH----ML 553

Query: 232 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL------------------------ 265
            +R  G V   G N+ GQLG G T++R TP  +  L                        
Sbjct: 554 AVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGAAHSLAVRYDGTLWA 613

Query: 266 -----------------------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
                                  + +GS V ++A   + LAV  +G ++ +G+ +   LG
Sbjct: 614 WGINNTSQLGDGTGIPRLVPTQVQGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLG 673

Query: 303 HGEQHDELQPRAIQTFR--RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
             + +    P  + T     + +     S G  H +AL S GY+  WG    G LG G  
Sbjct: 674 RNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTG-- 731

Query: 361 IDKTLPEPLSSL 372
           + + +P P+ SL
Sbjct: 732 VPENIPVPVLSL 743


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LIS     +S G + CG LG G  TT+ +    I      +++  +   NH+ FV  
Sbjct: 122 HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIP-EPIPTLKGFNIIHAAVGRNHSLFVTD 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN S  CG   T   I  P  V    G P  +V  G  F+  L   G +H+ 
Sbjct: 181 TGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAEFSMILDCNGALHSF 239

Query: 241 GSNTHGQLGH---GDTLDRPT---------PKSIA------------PLEEVGSVVQIAA 276
           G   +GQLGH   G      T         PK IA            P+++V  +V  + 
Sbjct: 240 GLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDV-DIVDFSC 298

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      YS+G G    LGH EQ DE  PR I+ F  +   V  V  G  + +
Sbjct: 299 GNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVHCGATYSL 358

Query: 337 ALDSSGYVYTWGK 349
           A++  G ++ +G+
Sbjct: 359 AVNEHGALFMFGQ 371



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 101/231 (43%), Gaps = 32/231 (13%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           S  H+  +   G+ ++ G NS    G  DT  R I  P  +  LKG        G N + 
Sbjct: 119 SAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNIIHAAVGRNHSL 176

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS-VVQIAAGPSYMLAVTG 286
           F+T  G V+ CG N   Q G G T    TP+ + P  +   G+ +V++  G  + + +  
Sbjct: 177 FVTDTGTVYACGDNKSAQCGLGHT----TPQILVPTRVRYTGAPIVKVGCGAEFSMILDC 232

Query: 287 NGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRKG----------IH 324
           NG ++SFG      LGH               H E+ P+ I  F  K           + 
Sbjct: 233 NGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVD 292

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           +V  S G+ H VA+DS    Y+WG G  G LGH ++ D+++P  +    S 
Sbjct: 293 IVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQ 343


>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 775

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 15/268 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 475 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 531

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 532 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 587

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 588 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 646

Query: 292 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 647 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 702

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LG G    +T+P     L    AV
Sbjct: 703 TAGVLGDGTTDRRTVPVQAQGLTGARAV 730



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 20/273 (7%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+
Sbjct: 170 SGGVAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVA 226

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A E H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +
Sbjct: 227 AGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHS 282

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 286
             +   G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  
Sbjct: 283 LAVRSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRF 338

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVY 345
           +G V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+
Sbjct: 339 DGTVWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVW 394

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG  + G LG G   ++ +  P+  L   +AV
Sbjct: 395 AWGGNHYGQLGDGTTSERLVAVPVQGLSGVMAV 427



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 16/275 (5%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  
Sbjct: 216 VKKLTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGG 272

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+    H+  V   G V+  G N     G     R +  P   + L GV  + V AG 
Sbjct: 273 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGH 330

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLA 283
           + +  +   G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LA
Sbjct: 331 SLSLAVRFDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALA 386

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V  +G V+++G      LG G   + L    +Q        V+ V+A  EH +A+ S   
Sbjct: 387 VRSDGTVWAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDAT 442

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ WG+ Y G LG G    + +P P+  L S +AV
Sbjct: 443 VWAWGRNYEGQLGDGTTRRREVPVPVPKLSSVVAV 477



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V   G V+  
Sbjct: 339 DGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAW 396

Query: 188 GDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G N     G   T+ R +  P  V+ L GV    V A    +  +     V   G N  G
Sbjct: 397 GGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATVWAWGRNYEG 452

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G      +G G +
Sbjct: 453 QLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTE 509

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P  +          V V+AG+ H + L S G V+ WG  + G LG+G   D  +P
Sbjct: 510 TSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVP 565

Query: 367 EPLSSLKSHLAV 378
             +  L   +AV
Sbjct: 566 VQVQGLSGGVAV 577



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 11/214 (5%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 75  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 131

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 132 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 187

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++GS     LG G  +  L P  ++        VV V+AG++H +A+ S G V+T
Sbjct: 188 DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKL----TGVVAVAAGEKHSLAVRSDGTVWT 243

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           WG    GALG G    + +P  +  L   +AV G
Sbjct: 244 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVAVAG 277


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 97/197 (49%), Gaps = 7/197 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VF  GD      G   +   +F PRLV+ LK      + AG   T  +T  G ++  GSN
Sbjct: 4   VFGRGDMGQLGDG---STEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
              QLG     D   P  +  LE+   V ++A GP++ LAV   G V +FGS     +G 
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQF-QVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G     ++ PR ++  R   +H+VRV+AG  H +AL S+G V++ G G  GALG G    
Sbjct: 120 GPCGARVELPRVVKDLRS--MHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 363 KTLPEPLSSLKSHLAVQ 379
             +P P+S L     VQ
Sbjct: 178 NDVPRPISRLWPLGVVQ 194



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 16/261 (6%)

Query: 93  VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
           V R ++ ++ S D+V  +AG +          + S+  ++  GS+    LG   + +  +
Sbjct: 23  VPRLVKGLK-SRDVVNLAAGALHTAA------VTSDGELYVMGSNEESQLGV-RQRSDAL 74

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           + TR+       V +V+    H   V+  G V   G       G       +  PR+V+ 
Sbjct: 75  APTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKD 134

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+ +   +V AG + T  L+  G V +CG+ + G LG G T     P+ I+ L  +G VV
Sbjct: 135 LRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLG-VV 193

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           QIA G ++  A+T +G V ++G G +     F  GHG+  +   P+ +Q    KGI   +
Sbjct: 194 QIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQAL--KGIVGRQ 251

Query: 328 VSAGDEHVVALDSSGYVYTWG 348
           VS GD+H V L   G VY WG
Sbjct: 252 VSCGDDHTVLLTEDGSVYAWG 272



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 122/256 (47%), Gaps = 13/256 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           V+  G    G LG G  +T+ V   R +    +  VV ++A   H A V   G+++  G 
Sbjct: 2   VWVFGRGDMGQLGDG--STEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGS 59

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     G R  +  +  P  V AL+    ++V  G   T  +   G V   GS  +GQ+G
Sbjct: 60  NEESQLGVRQRSDAL-APTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVG 118

Query: 250 HGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
            G    R   P+ +  L  +  +V++AAG S+ LA++  G V+S G+GS   LG G    
Sbjct: 119 LGPCGARVELPRVVKDLRSM-HIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL-----GHGDEIDK 363
              PR I   R   + VV+++ G+ H  A+ + G V TWG+G    L     GHGD  + 
Sbjct: 178 NDVPRPIS--RLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFENC 235

Query: 364 TLPEPLSSLKSHLAVQ 379
           + P+P+ +LK  +  Q
Sbjct: 236 STPKPVQALKGIVGRQ 251


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   V+ IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 TPVVVEKDRI 310



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 3/202 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N S C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + V+ ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMSIACGQMCSMAVVDTGEVYVWGYNG 233

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LG G   ++  P  +++L+
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQ 255



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   TAG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGTAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T +G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                 V+ V+ G  H + L S G V+ WG    G +G G   ++ +P
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIP 195


>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 750

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 15/268 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 450 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 506

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 507 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 562

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 563 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 621

Query: 292 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 622 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 677

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LG G    +T+P     L    AV
Sbjct: 678 TAGVLGDGTTDRRTVPVQAQGLTGARAV 705



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 20/273 (7%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+
Sbjct: 145 SGGVAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVA 201

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A E H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +
Sbjct: 202 AGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHS 257

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 286
             +   G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  
Sbjct: 258 LAVRSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRF 313

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVY 345
           +G V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+
Sbjct: 314 DGTVWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVW 369

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG  + G LG G   ++ +  P+  L   +AV
Sbjct: 370 AWGGNHYGQLGDGTTSERLVAVPVQGLSGVMAV 402



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V   G V+  
Sbjct: 314 DGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAW 371

Query: 188 GDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G N     G   T+ R +  P  V+ L GV    V A    +  +     V   G N  G
Sbjct: 372 GGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATVWAWGRNYEG 427

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G      +G G +
Sbjct: 428 QLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTE 484

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P  +          V V+AG+ H + L S G V+ WG  + G LG+G   D  +P
Sbjct: 485 TSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVP 540

Query: 367 EPLSSLKSHLAV 378
             +  L   +AV
Sbjct: 541 VQVQGLSGGVAV 552



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 16/275 (5%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  
Sbjct: 191 VKKLTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGG 247

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+    H+  V   G V+  G N     G     R +  P   + L GV  + V AG 
Sbjct: 248 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGH 305

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLA 283
           + +  +   G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LA
Sbjct: 306 SLSLAVRFDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALA 361

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V  +G V+++G      LG G   + L    +Q        V+ V+A  EH +A+ S   
Sbjct: 362 VRSDGTVWAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDAT 417

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+ WG+ Y G LG G    + +P P+  L S +AV
Sbjct: 418 VWAWGRNYEGQLGDGTTRRREVPVPVPKLSSVVAV 452



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 11/214 (5%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 50  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 106

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 107 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 162

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++GS     LG G  +  L P  ++        VV V+AG++H +A+ S G V+T
Sbjct: 163 DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKL----TGVVAVAAGEKHSLAVRSDGTVWT 218

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           WG    GALG G    + +P  +  L   +AV G
Sbjct: 219 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVAVAG 252


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 23/291 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
             V+TWGKG  G LGHGD  D+ +P  + +LK     H+A  G +  A +C
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIAC-GANFTAAIC 419



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 8/209 (3%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSS 371
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS 
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 372 LKSHLAVQGLSVLAEVCPTIVQEDTRSCS 400
           LK+     G+   A +   IV   + S S
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVS 264



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P+ +S      A+ GL V    C T
Sbjct: 172 WIPKRISG-----ALDGLPVAYVSCGT 193


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 21/226 (9%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G +HT+ L  +  +++ G+   G LG+G E+  C     I F S  +VV ++A  + +  
Sbjct: 230 GEFHTVALTKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGRDFSFA 288

Query: 178 VLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +   G++++ G NS    G       D       P LVEA  G+  KQ+ AG +    +T
Sbjct: 289 LTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVT 348

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++  G+    +           P  +  + E   + Q+A G  Y + +T +G V++
Sbjct: 349 EDGRLYMWGAKIWIE-----------PHEMTAVNE-HKMTQVACGRQYTVGLTDDGKVFT 396

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           FG GS+ CLGHG++ ++LQP  IQ     G+++  VS GD H+ A+
Sbjct: 397 FGKGSSNCLGHGDRKNQLQPVKIQAL--AGVNITSVSCGDYHMGAI 440



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNF 227
           A++  QS  V+T G+ +    GH    +   R       P+L EAL+G     V  G + 
Sbjct: 63  ASYATQS-SVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           +  +   G ++  GSN + +LG G++ +  T P+ +  L+ +  +V ++ G  +  AV  
Sbjct: 122 SAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGI-KIVDVSCGDYFTAAVDE 180

Query: 287 NGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +G +YS+G G +       LGH    DE  PR + T   +G+ +  V  G+ H VAL   
Sbjct: 181 DGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKD 240

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           G ++ WG G  G LG+G+     +PEP+
Sbjct: 241 GEIWAWGNGEYGRLGNGESDTCEVPEPI 268



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 45/260 (17%)

Query: 127 SNSSVFSCGSSLCGVLGHG---------------PETTQCVSFTRINFPSAAHVVQVSAS 171
           + SSV++ G+   G LGHG               P+ T+ +            +  V   
Sbjct: 67  TQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEAL--------EGKAITHVEFG 118

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+A + + G+++  G N     G  +++     PR VEALKG+    V+ G  FT  +
Sbjct: 119 ASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAV 178

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL------------DRPTPKSIAPLEEVG-SVVQIAAGP 278
              G +++ G         G T+            D PTP+ +  L + G  +  +  G 
Sbjct: 179 DEDGKMYSWGWG-------GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGE 231

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + +A+T +G ++++G+G    LG+GE      P  I+ F +   +VV ++AG +   AL
Sbjct: 232 FHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFAL 289

Query: 339 DSSGYVYTWGKGYCGALGHG 358
              G +Y+WG      LG G
Sbjct: 290 TDKGELYSWGGNSQNQLGIG 309



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 19/213 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V   E H   + + G+++  G+      G+ +++     P  +E         + AG
Sbjct: 224 IATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEV-PEPIEFFSKDNVVSIAAG 282

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGS---VVQIAAGPS 279
            +F+  LT +G +++ G N+  QLG G  L  D    +SI  L E  +   V QIAAG  
Sbjct: 283 RDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYD 342

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  AVT +G +Y +G+              ++P  +         + +V+ G ++ V L 
Sbjct: 343 HAAAVTEDGRLYMWGA-----------KIWIEPHEMTAVNEH--KMTQVACGRQYTVGLT 389

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             G V+T+GKG    LGHGD  ++  P  + +L
Sbjct: 390 DDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQAL 422


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 103/219 (47%), Gaps = 20/219 (9%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           V+    H   +   G V+  G N     G    TNRP+  P  V  L G+  + V A  +
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV--PVQVGGLSGI--RAVAASSD 200

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  +   G V   G N+ GQLG G T DR TP  +A L    S+ ++AAG  Y LAV G
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLS---SIKRVAAGDGYSLAVHG 257

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSA------GDEHVVALD 339
           +G V+++G  S+  LG G   D L P      R KG+  VV VSA      G  HV+A+ 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRLTPG-----RVKGLSEVVEVSAAKYSLLGSAHVLAVR 312

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G V+ WG    G LG G   D+  P  +S L    A+
Sbjct: 313 GDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAI 351



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 118/258 (45%), Gaps = 23/258 (8%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L +  + +V++ G +  G LG G   T     T +     + + +V+A + ++  V  
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDG---TTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHG 257

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 236
            G V+  G NSS   G   T   +  P  V+ L  V   +V+A     L     L +RG 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRL-TPGRVKGLSEV--VEVSAAKYSLLGSAHVLAVRGD 314

Query: 237 --VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP------SYMLAVTGNG 288
             V   G+N  GQLG G T DR TP  ++ L+ V ++    + P      SY LAV G+G
Sbjct: 315 GTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDG 374

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++GS S   LG G      +P  +         +  VSA  +H +A+   G V++WG
Sbjct: 375 TVWAWGSNSTGQLGDGTTISRSRPAQVNALS----GITAVSASSDHALAMRDDGTVWSWG 430

Query: 349 KGYCGALGHGDEIDKTLP 366
           K   G LG      + +P
Sbjct: 431 KNTNGKLGDETTAHRLIP 448



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 17/246 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S+ +V++ G +  G LG G    +    T        H+V V+ S  H+  +   G V
Sbjct: 618 LRSDGTVWAWGLNSVGQLGDGSTINRS---TPGPVGGLVHIVGVATSGGHSLALRNDGTV 674

Query: 185 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +  G N     G    TN+P  +P  V  L GV  K V A +  +  +   G V   G N
Sbjct: 675 WAWGGNHDGQLGDGTTTNQP--KPVQVSGLSGV--KAVAAAIVSSAVVRDNGTVWAWGDN 730

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G T DR TP  ++ L     V  +A+G  + LA+  +G V+++G      LG 
Sbjct: 731 YSGQLGDGTTTDRLTPVLVSGLS---GVKALASGNHHFLALRNDGTVWAWGDNYYSQLGD 787

Query: 304 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G +     P  +     +G+  V+ ++AG+ H +A+   G V+TWG    G LG+G    
Sbjct: 788 GTRTQRSTPVQV-----RGLSDVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842

Query: 363 KTLPEP 368
             LP P
Sbjct: 843 SALPVP 848



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 18/265 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  G  H++ +  +   ++ G    G+LG G      +SF  +         Q++
Sbjct: 455 SGVRSVAAGESHSVSVREDGKAWAWGYRGMGLLGDG---AMFLSFVPVQTMGLTATAQIA 511

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFT 228
           +  N +  V +   ++  G +S    G   T   P+    L +       K V AG +++
Sbjct: 512 SHGNRSLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDD------VKAVAAGNDYS 565

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +   G +   GSN+ GQLG G T +R TP  +  LE V   V  AA  S  LA+  +G
Sbjct: 566 LAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLENV---VGAAASFSVSLALRSDG 622

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  S   LG G   +   P  +       +H+V V+    H +AL + G V+ WG
Sbjct: 623 TVWAWGLNSVGQLGDGSTINRSTPGPVGGL----VHIVGVATSGGHSLALRNDGTVWAWG 678

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLK 373
             + G LG G   ++  P  +S L 
Sbjct: 679 GNHDGQLGDGTTTNQPKPVQVSGLS 703



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 111/263 (42%), Gaps = 21/263 (7%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+   +AGN       Y   + +N S+++ GS+  G LG G  T +    T +      +
Sbjct: 554 DVKAVAAGN------DYSLAVRNNGSLWAWGSNSIGQLGDGSTTNR---LTPVPVNGLEN 604

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           VV  +AS + +  +   G V+  G NS    G   T NR    P  V  L  +     + 
Sbjct: 605 VVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTINRST--PGPVGGLVHIVGVATSG 662

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G +    L   G V   G N  GQLG G T ++P P  ++ L  V +V            
Sbjct: 663 GHSLA--LRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIV---SSAV 717

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V  NG V+++G   +  LG G   D L P  +         V  +++G+ H +AL + G 
Sbjct: 718 VRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLS----GVKALASGNHHFLALRNDGT 773

Query: 344 VYTWGKGYCGALGHGDEIDKTLP 366
           V+ WG  Y   LG G    ++ P
Sbjct: 774 VWAWGDNYYSQLGDGTRTQRSTP 796



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 64/329 (19%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V+  S++VE SA    +  G  H L +  + +V++ G++  G LG G  TT  ++  +++
Sbjct: 286 VKGLSEVVEVSAAKYSL-LGSAHVLAVRGDGTVWAWGNNGSGQLGDG-TTTDRLTPVQVS 343

Query: 159 FPSAAHVVQV-------SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
                  + V       +++ +++  V   G V+  G NS+   G   T     RP  V 
Sbjct: 344 ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGD-GTTISRSRPAQVN 402

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL G+    V+A  +    +   G V + G NT+G+LG   T  R  P  +  L  V SV
Sbjct: 403 ALSGITA--VSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSGVRSV 460

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF------------- 318
              AAG S+ ++V  +G  +++G      LG G       P  +QT              
Sbjct: 461 ---AAGESHSVSVREDGKAWAWGYRGMGLLGDGAMFLSFVP--VQTMGLTATAQIASHGN 515

Query: 319 ------------------------RRKGIH---------VVRVSAGDEHVVALDSSGYVY 345
                                      G H         V  V+AG+++ +A+ ++G ++
Sbjct: 516 RSLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLW 575

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            WG    G LG G   ++  P P++ L++
Sbjct: 576 AWGSNSIGQLGDGSTTNRLTPVPVNGLEN 604


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 18/277 (6%)

Query: 107 VETSAGNMQITTG----RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           V T AG  ++       R+  LL+S+ +V SCG +  G LG   +  +     R     A
Sbjct: 14  VPTGAGGAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE----ERPGLIKA 69

Query: 163 AHVVQV---SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
              + V   S  + H+  V   G+VF  G  S    G  +    IF P+ ++ L G+   
Sbjct: 70  LETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKII 129

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           QV+ G   +  L+  G V++ G N+ GQLG G     + +P+ +  LE +  + Q+AAG 
Sbjct: 130 QVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGG 188

Query: 279 SYMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           ++  A++ +G  + +GS +   L   G+       +P +I     K + V+ +S G EH 
Sbjct: 189 AHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGAL--KSLDVIYISCGYEHT 246

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             L  +G V+T+G   CG LG+     K  P+ +  +
Sbjct: 247 AVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGI 283


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 22/229 (9%)

Query: 162 AAHVVQVSA---SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           AA V+ VS+      HAA V + G VF  G+      GH   +  +  P+LV+AL GV  
Sbjct: 285 AAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNA 343

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIA 275
           + V  G   T  +T+ G ++T G++    G +GH + +    PK + +PLE V  +  IA
Sbjct: 344 ELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIA 402

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +   V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H 
Sbjct: 403 CGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHT 460

Query: 336 VALD------------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            A+             SSG ++TWG G    LGHGD+  K +P  +++L
Sbjct: 461 AAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAAL 509



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P     +  ++  
Sbjct: 346 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSPLEGVRISSIACG 404

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +   G+  T  +
Sbjct: 405 AWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTVRAACGIWHTAAV 463

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 464 VEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY-NFRQVACGHS 522

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G V++ GS     LG+ +   ++         R    V  +  G  HV AL 
Sbjct: 523 LTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEEIGCGAHHVAALS 580

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 581 SKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 614



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 340 GVNAEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 397

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK      GL  +
Sbjct: 398 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLK------GLKTV 451

Query: 385 AEVC 388
              C
Sbjct: 452 RAAC 455



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 270 GAGSRVDSLVPKALQAAVV--LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 327

Query: 362 DKTLPEPLSSL 372
           D + P+ + +L
Sbjct: 328 DVSEPQLVQAL 338


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 116/248 (46%), Gaps = 10/248 (4%)

Query: 105 DIVETSAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP- 160
           ++VE+  G     I  G  HT+ L S   VFS G+   G LGHG    +  S   I+ P 
Sbjct: 187 NVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDR-YSPLMIDGPL 245

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              +VV V+  ENH+A + + G ++T G    F     D+     +PRLV+AL G    Q
Sbjct: 246 RDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQ 305

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V  G + T  +   G V++ G N  G+LG G       P  +  L    S+ +++ G  +
Sbjct: 306 VACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNLV---SICKVSCGRHH 362

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A+  +GV++ +G G+   LG GE      P  +  F  + +    VS G  H  A+ +
Sbjct: 363 SAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLE--DVSCGYGHTAAITA 420

Query: 341 SGYVYTWG 348
           +G  Y WG
Sbjct: 421 NGVAYCWG 428



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 8/182 (4%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           GH+D ++P F P +VE+L G     +  G + T  L  +G V + G+   G LGHG+  D
Sbjct: 176 GHKD-DKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRD 234

Query: 256 RPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQP 312
           R +P  I  PL +V +VV +A   ++   ++ +G +Y++G    F LG+ +     + +P
Sbjct: 235 RYSPLMIDGPLRDV-NVVHVACYENHSAVISEDGNLYTWGKAGPF-LGYMDDSVTKQTKP 292

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R +      G  +V+V+ G  H + +D  G VY++G    G LG G +   T P  + +L
Sbjct: 293 RLVDALY--GTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNL 350

Query: 373 KS 374
            S
Sbjct: 351 VS 352



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 8/278 (2%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           VE    IV      +Q+ T +   LL  NS  ++  G    G LGH  +  + +    + 
Sbjct: 132 VEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHKDDKPRFLPNV-VE 190

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVP 217
                +V  ++   +H   +   GQVF+ G     C GH +  R  + P +++  L+ V 
Sbjct: 191 SLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNL-RDRYSPLMIDGPLRDVN 249

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              V    N +  ++  G+++T G          D++ + T   +        +VQ+A G
Sbjct: 250 VVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACG 309

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ L +   G VYSFG      LG G      +P  +       + + +VS G  H  A
Sbjct: 310 RSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNL----VSICKVSCGRHHSAA 365

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           +D  G ++ WG G  G LG G+      P P++     
Sbjct: 366 IDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQ 403



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 9/181 (4%)

Query: 115 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ GR+H+  I    V F  G    G LG G E     S T +N  +   +  VS    
Sbjct: 355 KVSCGRHHSAAIDEDGVLFMWGWGARGQLGQG-EPKSLFSPTPVNGFNDQPLEDVSCGYG 413

Query: 174 HAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A +  +G  +  GDN+S  CG        +  PR +    G+   Q+  G NFT  +T
Sbjct: 414 HTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVT 473

Query: 233 IRGHVHTCGSNTHGQLGHGD---TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G + T G N  GQLG+G+   T  +P P  +  L E   V  +A G  ++  + G+G 
Sbjct: 474 SIGQLFTWGCNMSGQLGNGEAKKTFSQPMP--VESLSE-KRVKMVACGEDHIGCLVGHGW 530

Query: 290 V 290
           V
Sbjct: 531 V 531


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 23/274 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  IS S  +F+ G  S   G+LG+    +  +   R++ P     V+ V+  
Sbjct: 314 ISCGEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLP-KRVSGPLEGLQVLFVACG 372

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF---- 227
             H+A +  +G+++T GD +    GH +     + P+ VEAL G    +V  G+      
Sbjct: 373 SWHSALITSTGRLYTFGDGTFGALGHGNRESSAY-PKEVEALNGFRTIKVACGVWHSAAI 431

Query: 228 ------TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                 TG   +   ++T G     +LG GD   R  P  +  L E  +  Q+A G +  
Sbjct: 432 VEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLE-HNFHQLACGQNMT 490

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALD 339
           +A+  +G VY+ GS  N  LG+  + D  QP  +   + K  H  V  +S G  HV  L 
Sbjct: 491 VALATSGHVYTMGSSDNGQLGN-PKSDGKQPCLV---KDKLAHELVEEISCGAAHVAVLT 546

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWG G  G LGHGD  DK  P  + +LK
Sbjct: 547 SRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALK 580



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 17/224 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE++       ++ G
Sbjct: 259 VNQIVCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESISVTIVDFISCG 317

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 318 EFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGL-QVLFVACGSWHS 376

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
             +T  G +Y+FG G+   LGHG +     P+ ++     G   ++V+ G  H  A+   
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEAL--NGFRTIKVACGVWHSAAIVEA 434

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                    S  +YTWG G    LG GD+  + +P  + +L  H
Sbjct: 435 TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEH 478



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 16/227 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +H+ LI S   +++ G    G LGHG   +       +   +    ++V+    H
Sbjct: 369 VACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYP-KEVEALNGFRTIKVACGVWH 427

Query: 175 AAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +A +++          S +++T GD      G  D    +  P  V+AL      Q+  G
Sbjct: 428 SAAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLI-PTCVQALLEHNFHQLACG 486

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N T  L   GHV+T GS+ +GQLG+  + D   P  +        V +I+ G +++  +
Sbjct: 487 QNMTVALATSGHVYTMGSSDNGQLGNPKS-DGKQPCLVKDKLAHELVEEISCGAAHVAVL 545

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           T    VY++G G+N  LGHG+ +D+  P  ++  + +  HV  +S G
Sbjct: 546 TSRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDR--HVKSISCG 590



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 4/171 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 245 VLIPKPLESDVVLDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 304

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 305 SIS-VTIVDFISCGEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRV-SGPLE 362

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L
Sbjct: 363 GLQVLFVACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEAL 413


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 131/271 (48%), Gaps = 19/271 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M I TG   T+ L S+ +V++ GS+  G LG G    + V  T ++  S    +      
Sbjct: 87  MDIHTGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVP-TPVSGLSGIKAISGGLGY 145

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H+  + ++G V+T G N +   G+  T   N P+    LV  L  V    + AG  ++ 
Sbjct: 146 -HSMALTENGTVWTWGKNDNGELGNGTTVQQNSPV----LVIGLSDVTA--IAAGGYYSL 198

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G +   G+N +G+LG G  +D+ TP  ++ L +V   + I AG S+ LA+  +G 
Sbjct: 199 ALKSDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDV---IAITAGGSHSLAIKQDGT 255

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G      LG G + +   P  ++  +    H+  ++ G  H +ALD  G V+ WG 
Sbjct: 256 VWAWGINMYGTLGDGTRTNRTIPVKVRNLQ----HIKAIAGGGHHSLALDQEGNVWGWGD 311

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
              G LG G    +T PE L+ ++  L + G
Sbjct: 312 NSRGQLGLGHNSSRTTPEQLTGIEHVLDIAG 342



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 20/250 (8%)

Query: 121 YHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH++ L  N +V++ G +  G LG+G    Q      I     + V  ++A   ++  + 
Sbjct: 145 YHSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGL---SDVTAIAAGGYYSLALK 201

Query: 180 QSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             G ++  G N +   G     D + P+    L + +       +TAG + +  +   G 
Sbjct: 202 SDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDVIA------ITAGGSHSLAIKQDGT 255

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N +G LG G   +R  P  +  L+ + +   IA G  + LA+   G V+ +G  
Sbjct: 256 VWAWGINMYGTLGDGTRTNRTIPVKVRNLQHIKA---IAGGGHHSLALDQEGNVWGWGDN 312

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           S   LG G       P  +        HV+ ++ G  H  AL   G V+ WG    G +G
Sbjct: 313 SRGQLGLGHNSSRTTPEQLTGIE----HVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIG 368

Query: 357 HGDEIDKTLP 366
            G   D+  P
Sbjct: 369 DGTRNDRNAP 378



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
           ++ AG  +  ++  +G VY +G G    +G    +    P      + +G++ V+ +  G
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTP-----VQARGLNDVMDIHTG 92

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
               +AL S G V+TWG    G LG G   DK +P P+S L    A+ G
Sbjct: 93  VRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSGIKAISG 141


>gi|111220973|ref|YP_711767.1| BNR repeat-containing protein [Frankia alni ACN14a]
 gi|111148505|emb|CAJ60176.1| BNR repeat domain protein (partial) [Frankia alni ACN14a]
          Length = 385

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 123/270 (45%), Gaps = 25/270 (9%)

Query: 106 IVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA- 163
           +V  + G  Q+  G YH++++ S+ +V++ G +L G LG G  T +     R   P +  
Sbjct: 37  VVGLTDGVTQVAAGGYHSVVLRSDGTVWTSGLNLNGELGDGTTTDR-----RTPGPVSGL 91

Query: 164 -HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             + Q++A+ +    +   G V+  G NS    G   T R    P  V  L G+   QV 
Sbjct: 92  TGITQIAANSHFTLALRSDGTVWAWGANSYGQLGDGST-RGRNTPVQVSGLAGI--TQVD 148

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG      L   G V   G N  GQ+G G T  R TP  ++ L     V QIAAG  + L
Sbjct: 149 AGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRSTPTQVSGLT---GVTQIAAGGGHSL 205

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALD-- 339
            V G+G V+ +G   N  LG G   D     +    R  G+  V R++AG+ H +AL   
Sbjct: 206 VVRGDGAVWGWGLNRNGQLGDGTTRD-----STTAVRAAGLTGVARIAAGETHSLALLGG 260

Query: 340 ---SSGYVYTWGKGYCGALGHGDEIDKTLP 366
              SSG V+ WG    G LG     D+  P
Sbjct: 261 AGLSSGQVFAWGDNSSGQLGDRTRTDRVTP 290



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 12/225 (5%)

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G LG G  TT+      +       V QV+A   H+  +   G V+T G N +   G   
Sbjct: 21  GALGDGSTTTRLTPVQVVGLTDG--VTQVAAGGYHSVVLRSDGTVWTSGLNLNGELGD-G 77

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T      P  V  L G+   Q+ A  +FT  L   G V   G+N++GQLG G T  R TP
Sbjct: 78  TTTDRRTPGPVSGLTGI--TQIAANSHFTLALRSDGTVWAWGANSYGQLGDGSTRGRNTP 135

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             ++ L     + Q+ AG ++ LA+  +G V+++G      +G G       P  +    
Sbjct: 136 VQVSGLA---GITQVDAGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRSTPTQVSGL- 191

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                V +++AG  H + +   G V+ WG    G LG G   D T
Sbjct: 192 ---TGVTQIAAGGGHSLVVRGDGAVWGWGLNRNGQLGDGTTRDST 233



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             QV AG   +  L   G V T G N +G+LG G T DR TP    P+  +  + QIAA 
Sbjct: 44  VTQVAAGGYHSVVLRSDGTVWTSGLNLNGELGDGTTTDRRTP---GPVSGLTGITQIAAN 100

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + LA+  +G V+++G+ S   LG G       P  +Q     GI   +V AG  H +A
Sbjct: 101 SHFTLALRSDGTVWAWGANSYGQLGDGSTRGRNTP--VQVSGLAGI--TQVDAGAAHGLA 156

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           L + G V+ WG    G +G G    ++ P  +S L
Sbjct: 157 LRNDGTVWAWGDNEFGQVGDGSTTSRSTPTQVSGL 191



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 89/224 (39%), Gaps = 31/224 (13%)

Query: 111 AGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           AG  Q+  G  H L + N  +V++ G +  G +G G  T++    T         V Q++
Sbjct: 142 AGITQVDAGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRS---TPTQVSGLTGVTQIA 198

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----L 225
           A   H+  V   G V+  G N +   G   T       R    L GV   ++ AG    L
Sbjct: 199 AGGGHSLVVRGDGAVWGWGLNRNGQLGDGTTRDSTTAVR-AAGLTGV--ARIAAGETHSL 255

Query: 226 NFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--------------- 269
              G   +  G V   G N+ GQLG     DR TP  I  L   G               
Sbjct: 256 ALLGGAGLSSGQVFAWGDNSSGQLGDRTRTDRVTPVRIPGLPPAGATTSAAQGSGAAQGP 315

Query: 270 -SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            SV QIA G  + LA+  +G V+++G    + LG G +     P
Sbjct: 316 RSVTQIATGNLHSLALLSDGTVWAWG---RYPLGDGTETTRESP 356


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 129/308 (41%), Gaps = 59/308 (19%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I +G  HTL +S+   V+SCGS+  G LG G       +   ++  S   ++Q+SA  +H
Sbjct: 52  IASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNS------------------------------------------- 191
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    +P  Q++AG  FT  LT  G +   G N  GQLG  
Sbjct: 172 VFIWGQQSDGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P ++     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNKDVVNPCAVP---NINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PNRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 367 EPLSSLKS 374
             + S+++
Sbjct: 342 RVIDSVEN 349



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 24/259 (9%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAH-----VVQVSASENHAAFVLQS 181
           VF C     G LG  P++     Q +   R+ + +        V  +++ E H  F+   
Sbjct: 8   VFGCAGD--GQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSDD 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILASDTPKRVPSLPET---VQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           + H        P  ++ F    I +V++SAG+   +AL +SG ++ WGK   G LG    
Sbjct: 183 IRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTN 233

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
            D   P  + ++ S +AV+
Sbjct: 234 KDVVNPCAVPNINSVVAVE 252



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           IV+ SAGN+      +   L ++ ++F+ G +  G LG   + T          P+   V
Sbjct: 198 IVQISAGNL------FTMALTASGTLFAWGKNEEGQLG---DFTNKDVVNPCAVPNINSV 248

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V   ++H+  +   G+VF+CG +S    G    NR     R +  + G    ++  G 
Sbjct: 249 VAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGR 308

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
             T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 309 CHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASV 353


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 48/306 (15%)

Query: 96  FLQSVEHSSDI-VETSAGNMQITTGRYHTLLISNS-SVFSCGSSL---------CGVLGH 144
           F++S  + ++I  E   G   ++ G +HTL+I++  ++F  G            C +L  
Sbjct: 252 FVRSYVNKTEINEEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQ 311

Query: 145 GPETTQCVSFTRINF-----PSAAHV------VQVSASENHAAFVLQSGQVFTCGDNS-- 191
                Q       NF     P+   V      +QV+   +H+  +  +GQ+FT G N+  
Sbjct: 312 NKSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRG 371

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
               GHR+      +P ++  +  V    + +G   + F++    ++T G+  + +LGHG
Sbjct: 372 QLGQGHRNDQ---LKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHG 426

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            T D   PK +  LE+V  V  ++ G ++ LA+T  G VY++G G +  LG  E +    
Sbjct: 427 VTTDELYPKKVVVLEDV-YVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENN---- 481

Query: 312 PRAIQTFRRKGIHV-VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK----TLP 366
                    K +H+  RVSAG  H +AL   G +Y+WG    G LG G + D     +LP
Sbjct: 482 ---------KSLHLPTRVSAGGLHSMALTDQGILYSWGSSKGGVLGIGFQRDNKDCYSLP 532

Query: 367 EPLSSL 372
           + + ++
Sbjct: 533 QKIRTV 538



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 246 GQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           GQLG+ + ++   PT   + P  +    +Q+A G S+ +A+T NG ++++G  +   LG 
Sbjct: 319 GQLGNENFVNVYEPTELLVWPKRKF---IQVACGSSHSMALTDNGQIFTWGKNTRGQLGQ 375

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G ++D+L+P  I       +    + +GD+H   +     +YTWG G    LGHG   D+
Sbjct: 376 GHRNDQLKPTMIII----EVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDE 431

Query: 364 TLPEPLSSLK 373
             P+ +  L+
Sbjct: 432 LYPKKVVVLE 441



 Score = 38.9 bits (89), Expect = 5.3,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 90/227 (39%), Gaps = 44/227 (19%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTA 223
            ++ +S S  HA  +   G  ++ G N  +  G     +    P+ ++ AL+       T 
Sbjct: 791  IIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMSTC 850

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
               F+  LT +G + T G++  G LGH D  +         + ++  ++ +A+GP  M+A
Sbjct: 851  SDRFSALLTDKGEIWTFGTSDSGVLGH-DEKNYYVVSEPKMINDIPPMIFLASGPQGMMA 909

Query: 284  VT---------GNGVVYSFG---SGSNFCLGH-------GEQHDEL-------------- 310
            +T         GN +    G   + +N  +          +  DE+              
Sbjct: 910  ITEQKRQIYAWGNNLYGQLGIQITNNNMNMNQFGPDIDIDDSQDEIKQKEKKIDLDEQNK 969

Query: 311  ---------QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
                     +P+ ++    + I + ++  G  H VA+D  G++Y+ G
Sbjct: 970  KITKNQIIYKPQKVKIENDRKIQIRQIGMGMFHSVAIDDLGHLYSCG 1016



 Score = 38.5 bits (88), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 234 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G  ++ GSN + QLG G        P+ I    E   ++       +   +T  G +++
Sbjct: 807 KGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMSTCSDRFSALLTDKGEIWT 866

Query: 293 FGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGK 349
           FG+  +  LGH E++  +  +P+ I         ++ +++G + ++A+ +    +Y WG 
Sbjct: 867 FGTSDSGVLGHDEKNYYVVSEPKMINDIPP----MIFLASGPQGMMAITEQKRQIYAWGN 922

Query: 350 GYCGALG 356
              G LG
Sbjct: 923 NLYGQLG 929


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 144/300 (48%), Gaps = 26/300 (8%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRY-HTLLI-SNSSVFSCGSSLCGVLGH 144
           N N  +++RF    EH     E    N+  + G   HTL I S+  ++S G    G LGH
Sbjct: 453 NQNRPKLIRF----EH-----ECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGH 503

Query: 145 GPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NR 202
           G   TQ  S   I  P    VV Q++    H+A +   G ++T GD      GH D  +R
Sbjct: 504 GNHVTQ-KSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSR 562

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKS 261
            I  P LV+ + GV    V+ G +FT  ++     V + G+  +G+LGHGDT     PK 
Sbjct: 563 SI--PTLVKDITGV--GSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKV 618

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRR 320
           I+ L+ +  + ++       LA+T  G V+ +GSG   CLG+G+     L P+ +  F  
Sbjct: 619 ISNLQGL-LIRKVCCASQSSLALTSIGQVFVWGSGP--CLGYGQADATFLVPKRLDEF-- 673

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQ 379
           + + ++ ++ GD H +AL     VY+WG    G  G G+      LP  ++   +H+  Q
Sbjct: 674 QDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQ 733



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H+L ++ +  VFS G    G LGHG    Q     +I       V+ V+    H+A V  
Sbjct: 3503 HSLALTETGEVFSWGDGDYGKLGHGNSERQRRP-RQIEALRGEDVLHVACGHKHSAIVTV 3561

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVHT 239
             G++FT G +     G  +T+     P  V AL+ +  + +  G N T  +T  R  V T
Sbjct: 3562 DGKLFTFGASDLGRLGLGNTSNKKL-PAQVTALQPIMVELIACGANHTVVVTTDRESVWT 3620

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +GQLG G T  + TP+ +    ++ ++ +I  G  + LA+T  G VYS   G N 
Sbjct: 3621 FGEGEYGQLGLGRTTAKMTPQYVDAFSKL-NIKKICCGARFTLALTKEGKVYS--CGHNR 3677

Query: 300  CLGHGE---QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            C G  E   QH +  P+ +     + I    ++AG EH +AL   G V++WG    G LG
Sbjct: 3678 CNGIFEVDTQHADYYPQQVMALSEQFIE--DIAAGYEHALALTKEGDVWSWGNDTDGQLG 3735

Query: 357  HGDEIDKTLPEPLSSLK 373
             G  + +  P  +SSL+
Sbjct: 3736 LGQTLPQREPCLISSLQ 3752



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 8/249 (3%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            QI  G   T +I  + +V +CG    G LG G   +  +    T +       +   +  
Sbjct: 3441 QIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGL 3500

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            E H+  + ++G+VF+ GD      GH ++ R   RPR +EAL+G     V  G   +  +
Sbjct: 3501 EGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPRQIEALRGEDVLHVACGHKHSAIV 3559

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVV 290
            T+ G + T G++  G+LG G+T ++  P  +  L+ +  V  IA G ++ + VT +   V
Sbjct: 3560 TVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPI-MVELIACGANHTVVVTTDRESV 3618

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++FG G    LG G    ++ P+ +  F +  +++ ++  G    +AL   G VY+ G  
Sbjct: 3619 WTFGEGEYGQLGLGRTTAKMTPQYVDAFSK--LNIKKICCGARFTLALTKEGKVYSCGHN 3676

Query: 351  YCGALGHGD 359
             C  +   D
Sbjct: 3677 RCNGIFEVD 3685



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 10/179 (5%)

Query: 199  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            ++ R + +P L  +      KQ+  G N T  +   G V  CG  ++G+LG G++ D P 
Sbjct: 3422 ESGRLVLQPTLTSSFS--KAKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPR 3479

Query: 259  PKSIAPLEEVGSVVQIAAGPS----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
             + I  L+  G VV   A  +    + LA+T  G V+S+G G    LGHG    + +PR 
Sbjct: 3480 LRPITALQ--GFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQ 3537

Query: 315  IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            I+  R  G  V+ V+ G +H   +   G ++T+G    G LG G+  +K LP  +++L+
Sbjct: 3538 IEALR--GEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQ 3594



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + +  G  H+ +++ +  +F+ G+S  G LG G  + + +   ++       V  ++   
Sbjct: 3547 LHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLP-AQVTALQPIMVELIACGA 3605

Query: 173  NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            NH   V    + V+T G+      G   T   +  P+ V+A   +  K++  G  FT  L
Sbjct: 3606 NHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKM-TPQYVDAFSKLNIKKICCGARFTLAL 3664

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V++CG N    +   DT      P+ +  L E   +  IAAG  + LA+T  G V
Sbjct: 3665 TKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSE-QFIEDIAAGYEHALALTKEGDV 3723

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +S+G+ ++  LG G+   + +P  I + + KGI   ++SAG  H  A
Sbjct: 3724 WSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIR--QISAGHNHSAA 3768



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 13/236 (5%)

Query: 116  ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I  G  HT++++    SV++ G    G LG G  TT  ++   ++  S  ++ ++     
Sbjct: 3601 IACGANHTVVVTTDRESVWTFGEGEYGQLGLG-RTTAKMTPQYVDAFSKLNIKKICCGAR 3659

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                + + G+V++CG N        DT    + P+ V AL     + + AG      LT 
Sbjct: 3660 FTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTK 3719

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA--VTGNGVVY 291
             G V + G++T GQLG G TL +  P  I+ L+  G + QI+AG ++  A  V    +  
Sbjct: 3720 EGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKG-IRQISAGHNHSAAWTVAPASIRK 3778

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            +  + S+  LG  E+  E+           GI +  + +  ++++ +  + Y Y+W
Sbjct: 3779 AMATSSSLELGLPERIPEIYGSL------AGIDIQLIRSRLQYLLDMSEAIY-YSW 3827



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   VF  GS  C  LG+G      +   R++      ++ ++  +NH   +     V
Sbjct: 640 LTSIGQVFVWGSGPC--LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDV 697

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++ G+N+S  CG  + N P+  PR V         Q++ G
Sbjct: 698 YSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVG 737


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 11/270 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 31  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--PIQALSTVHIDLVSCG 88

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 89  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 207

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 265

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           G      L H     +  P+ +  +  H++
Sbjct: 266 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVS 295



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 18  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 78  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 134

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 184



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 6/203 (2%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 21  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 79

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 80  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 138

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 196

Query: 334 HVVALDSSGYVYTWGKGYCGALG 356
           H  AL   G  + WG    G L 
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLA 219



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 196 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 255

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 256 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 315

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 316 SLGRGPS 322


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDN-QEVEFLACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDLGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G   D+ +P P+         L++H + + L ++A
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIMIA 365



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---YPSLIEALDNQEVEFLACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+SFGSG +  LG+G   D+L P  ++    + + +   ++  E ++    +  +  W 
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIMIAGGNQSILLWI 375

Query: 349 K 349
           K
Sbjct: 376 K 376


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 11/270 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--PIQALSTVHIDLVSCG 239

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           G      L H     +  P+ +  +  H++
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVS 446



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 335



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 6/203 (2%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 334 HVVALDSSGYVYTWGKGYCGALG 356
           H  AL   G  + WG    G L 
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLA 370



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 4/209 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  V+    H+A V+ SG+V   G+N    CG   T      P  V +L GV C  V+ 
Sbjct: 30  QVRDVACGLVHSAMVMGSGEVLCWGENKYGQCG-TGTQEQTEHPTFVGSLFGVACMSVSC 88

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  ++  G V + G   +GQLGHG   +  TP  +  +     V+ +  G  + + 
Sbjct: 89  GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGR-DVLAVTCGVGHTVI 147

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V   G +Y+ G   N   G G   D L P+ +++ R +G+     S G  H   +   G 
Sbjct: 148 VLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQ--HASCGAGHTAVVTGGGE 205

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           V+T+G G CG LGHGD  D ++P  + +L
Sbjct: 206 VFTFGSGSCGQLGHGDCQDLSMPRRVGAL 234



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 22/245 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VV 166
           M ++ G  HT+++S +  VFS G    G LGHG       S   +  PS         V+
Sbjct: 84  MSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG-------SRDNLTTPSVVQAMRGRDVL 136

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V+    H   VL  G+++TCG N +  CG   T+  +  P+ VE+L+G   +  + G  
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTS-DLLSPQCVESLRGEGVQHASCGAG 195

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT 285
            T  +T  G V T GS + GQLGHGD  D   P+ +  L  VG V+  +A G  Y +   
Sbjct: 196 HTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGAL--VGIVMSMVACGEEYTVCAA 253

Query: 286 GNGVVYSFGSGSNFCLGHGE-QHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  V+ FG  +   LG     H  L +PR ++  + + + + + +     V+AL   G 
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCN--QSEVIALTRRGA 311

Query: 344 VYTWG 348
           +  WG
Sbjct: 312 LRAWG 316



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 8/255 (3%)

Query: 116 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  H+ ++  S    C G +  G  G G  E T+  +F    F  A   + VS    
Sbjct: 34  VACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVAC--MSVSCGGA 91

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V + G+VF+ G  ++   GH   +  +  P +V+A++G     VT G+  T  +  
Sbjct: 92  HTVVVSEDGRVFSWGLGANGQLGHGSRDN-LTTPSVVQAMRGRDVLAVTCGVGHTVIVLA 150

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++TCG N +GQ G G T D  +P+ +  L   G V   + G  +   VTG G V++F
Sbjct: 151 GGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEG-VQHASCGAGHTAVVTGGGEVFTF 209

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GSGS   LGHG+  D   PR +      GI +  V+ G+E+ V       V+ +G    G
Sbjct: 210 GSGSCGQLGHGDCQDLSMPRRVGAL--VGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVG 267

Query: 354 ALGHGDEIDKTLPEP 368
            LG        L EP
Sbjct: 268 QLGASSTSHPYLSEP 282



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 3/167 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PR+++   G   + V  GL  +  +   G V   G N +GQ G G       P  +  L 
Sbjct: 20  PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLF 79

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            V + + ++ G ++ + V+ +G V+S+G G+N  LGHG + +   P  +Q  R  G  V+
Sbjct: 80  GV-ACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMR--GRDVL 136

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V+ G  H V + + G +YT G    G  G G   D   P+ + SL+
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLR 183


>gi|405961464|gb|EKC27265.1| Serine/threonine-protein kinase Nek9 [Crassostrea gigas]
          Length = 627

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 86/170 (50%), Gaps = 11/170 (6%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           +KG    Q+ AG +    +T+   V+T      GS   GQLGHG+T     PK +  LE+
Sbjct: 343 VKGKSAIQIAAGHSHFAVVTMEKEVYTWANVQGGSEIVGQLGHGNTSAYKAPKKVEELED 402

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVV 326
           V   +Q++ G  +   V+  G VY+FGS    CLG  E+ D  L P  +  F    +   
Sbjct: 403 V---IQVSCGEDFTFCVSDEGKVYAFGSNYYGCLGLEEEDDTVLSPVPLPFFSSNPVE-- 457

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            +S G+ HV AL   G VYTWG G  G LG G E D + P+ +++   HL
Sbjct: 458 EISCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHL 507



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 24/257 (9%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQCVSFT 155
              DI       +QI  G  H  +++    V++      GS + G LGHG  T+   +  
Sbjct: 337 QKQDIFVKGKSAIQIAAGHSHFAVVTMEKEVYTWANVQGGSEIVGQLGHG-NTSAYKAPK 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           ++       V+QVS  E+    V   G+V+  G N   C G  + +  +  P  +     
Sbjct: 396 KVE--ELEDVIQVSCGEDFTFCVSDEGKVYAFGSNYYGCLGLEEEDDTVLSPVPLPFFSS 453

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQI 274
            P ++++ G N    LT  G V+T G    G+LG G   D  TP+ +A P + +   V  
Sbjct: 454 NPVEEISCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHLFKHVVC 513

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---------- 324
            +  ++++ V  NG V + GS  +  LG   +   L+   +Q +     +          
Sbjct: 514 GSDGTFLITV--NGRVLAAGSNEHNKLGFNSETSGLRKSKVQVYDIPCKYTFSTVKPLTR 571

Query: 325 --VVRVSAGDEHVVALD 339
             + +V+AG +H  A+D
Sbjct: 572 YIITKVAAGKDHSAAVD 588


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 14/254 (5%)

Query: 143 GHGPETTQCVSFTRINFPS---AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G  P      S   + F S      ++Q++  + H+  + + G++F  G N     G   
Sbjct: 115 GGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGR 174

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
                  P++VE L G+P  Q++AG   +  L++ G++++ G N  GQLG   T  + +P
Sbjct: 175 KFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSP 234

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             I  L+    V  +A G S+   +T +G++++FG+G +  LGH    +EL+P  +    
Sbjct: 235 SLIEALDN-QKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL- 292

Query: 320 RKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLS-------S 371
             G  V +++ G  H +A  S  G V+++G G  G LG+G   D+ +P P+         
Sbjct: 293 -AGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLK 351

Query: 372 LKSHLAVQGLSVLA 385
            +SH + + L ++A
Sbjct: 352 FESHTSEKELIMIA 365



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 4/238 (1%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   S   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +++ G N     G  D       P L+EAL     + +  G + T  LT
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLG-LDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVY 291
             G + T G+  HGQLGH  T +   P  +A L     V QIA G  + LA V+  G V+
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAG-NRVTQIACGRWHTLAYVSDLGKVF 318

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           SFGSG    LG+G   D+L P  ++    + +     ++  E ++    +  +  W K
Sbjct: 319 SFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGENQSILLWIK 376


>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
           nagariensis]
 gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
           nagariensis]
          Length = 942

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 142/324 (43%), Gaps = 25/324 (7%)

Query: 73  GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSV 131
           G+S + Q+ +  R N    +V+  L  V+    I   S     +  G  +T+ L +   V
Sbjct: 257 GVSEDGQLGVEERENVVAPKVVEALLGVQ----ISGRSFCRTPLVAGSRNTMALDAAGQV 312

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +S G +  G LGHG    +     RI       +VQV+    H   +   G +F  G N 
Sbjct: 313 WSFGWNDRGTLGHGHRDVETKP-KRIPALKGIRIVQVAIGGWHCLALSDRGTMFAWGGNE 371

Query: 192 SFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
              CG      RD   P+  P  +        +QV+AG   +  L   G V   G N   
Sbjct: 372 YGQCGSVLPGQRDITEPM--PVDLGLGPSQRVRQVSAGGMHSLALLEDGMVWQWGEN--- 426

Query: 247 QLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
               GD   RP  TP+ +A   + G V  ++ G  + LA+T  G V S+G      LG+G
Sbjct: 427 ---WGDFSMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGRVLSWGMNDYGQLGNG 483

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--ID 362
                  PR +     +G+ V  ++AG  H  AL S+G V+ WG+G  G LG GD     
Sbjct: 484 STTYATTPRPV--LDMEGVVVADIAAGGWHSCALSSAGEVWVWGRGEYGRLGLGDRSGSS 541

Query: 363 KTLPEPLSSLKSHLAVQGLSVLAE 386
           K  P+ +  L+SH+ VQG  V+AE
Sbjct: 542 KLRPQKVRGLESHVVVQGRWVMAE 565


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 11/270 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--PIQALSTVHIDLVSCG 239

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           G      L H     +  P+ +  +  H++
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVS 446



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 335



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 6/203 (2%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 334 HVVALDSSGYVYTWGKGYCGALG 356
           H  AL   G  + WG    G L 
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLA 370



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
           latipes]
          Length = 531

 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 6/251 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           +  VF  G +    LG G   +  V   +++F +   +V +S  S  H     + G++F 
Sbjct: 40  DDEVFVLGLNCSNCLGTGDSQSTIVP-KKLDFLNGRKIVSLSYGSGPHVLMATEDGELFA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G N     G+  TN+ +  P LV A +      +V  G + +  LT  G V+  G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-APVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNC 157

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             ++L P  +     +G+ V+++  G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTPCRLVAL--QGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLS 275

Query: 366 PEPLSSLKSHL 376
           P  + S K  +
Sbjct: 276 PVQIMSEKERI 286



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 9/220 (4%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A +V    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV-PKKLDFLNGRKIVSLSYGSGPHV 87

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            + T  G +   G N + QLG+G T     P  ++       VV++A G  + +A+T +G
Sbjct: 88  LMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVGIVCGQTSSLAVVDNGEVYGWG 206

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
               G LG G+  ++  P  L      +A+QGL VL  VC
Sbjct: 207 YNGNGQLGLGNNGNQLTPCRL------VALQGLCVLQIVC 240



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 8/188 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           VV+V+   +H+  +  SG+V+  G N+    G   T N+P  R R+   L+      +  
Sbjct: 130 VVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPR-RVSSCLQNKVAVGIVC 188

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G V+  G N +GQLG G+  ++ TP  +  L+ +  V+QI  G ++ LA
Sbjct: 189 GQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGL-CVLQIVCGYAHCLA 247

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA--GDEHVVALDSS 341
           ++  GV+Y++GS +   LG G + ++L P  I + + +   +V V+A        A   S
Sbjct: 248 LSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQIMSEKER---IVEVAACHSTHTSAAKTQS 304

Query: 342 GYVYTWGK 349
           G VY WG+
Sbjct: 305 GQVYMWGQ 312


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 17/263 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSN----FCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             SFG GSN      L G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257

Query: 345 YTWGKGYCGALGHGDEIDKTLPE 367
           +T+G    G LGH    +K  P+
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQ 280



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 9/240 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A + ++G V ++G+G
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 9/215 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
             + WG    G L   G+   + +  P  + +LK+
Sbjct: 201 TSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKT 235



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G N++        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            +++Q A+G  + L +  +G V S G  S   LG        QP  I     + +HV  V
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPAL--ETLHVALV 80

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSL 372
           S G EH +A+   G V+ WG    G LG G+  + T +P+ + +L
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 12/273 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
             +D  ++     +++ G  HTL L+ + ++ SCG +  G LG     +   S  +I+  
Sbjct: 25  KENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNS---SIEQISSL 81

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            A  +V +S   NH+  V   G +++ GD S    G  + +   F P+ +  L      Q
Sbjct: 82  EAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQ 141

Query: 221 VTAGLNFTGF-LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++ G NF    L+  G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG 
Sbjct: 142 ISCG-NFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGG 199

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           S   A++ +G V+++G  +   LG          +P A+ + R  G  V  +S G+EH  
Sbjct: 200 SQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG--VAYISCGEEHTA 257

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L   G VYT+G    G LG       ++P+ +
Sbjct: 258 VLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKI 290



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 14/244 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  H++ +S+  S++S G    G LG G  +++  +  +I       ++Q+S   
Sbjct: 87  VDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 229
            H+  + + G+VF+ G N    CG       I     P+LV++LKG+P  QVTAG + + 
Sbjct: 147 FHSLALSEDGRVFSWGQNK---CGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSF 203

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L++ G V   G N  GQLG      + T  P ++  L  +G V  I+ G  +   ++ +
Sbjct: 204 ALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG-VAYISCGEEHTAVLSKD 262

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYT 346
           G VY+FG  ++  LG    +    P+ I+ +  +   V +V+ G  H ++ + S   + +
Sbjct: 263 GSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQ---VSQVACGRYHTLLYVFSCNRIVS 319

Query: 347 WGKG 350
           +GKG
Sbjct: 320 FGKG 323


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 7/201 (3%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGV 216
           P+   VV V+  E H   +   G V +CGDNS    G R      +  + P L++AL+  
Sbjct: 34  PADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ 93

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V+ G   +  +  +G V++ G+ T GQLG G+  DR  PK+I  L +   V+Q+A 
Sbjct: 94  KVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKY-KVIQVAC 152

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+T +G ++S+G   +  LG G+    +  P+ +      GI + +V+AG  H 
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSAL--DGIPLAQVAAGGAHS 210

Query: 336 VALDSSGYVYTWGKGYCGALG 356
            AL  SG VY WG+     LG
Sbjct: 211 FALSLSGVVYGWGRNNAHQLG 231



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 28/258 (10%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLG-----------HGPETTQCVSFTRINFPSAA 163
           +  G  HTLL+ +   V SCG +  G LG           +GPE  Q +   +       
Sbjct: 42  VACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQK------- 94

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            VV VS  + H+  V   G+V++ G  +    G  +    +  P+ + AL      QV  
Sbjct: 95  -VVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLI-PKTINALSKYKVIQVAC 152

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  LT  G + + G N HGQLG G D   + +P+ ++ L+ +  + Q+AAG ++  
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGI-PLAQVAAGGAHSF 211

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           A++ +GVVY +G  +   LG  +   + Q   P +I   R   + V  VS G EH   L 
Sbjct: 212 ALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALR--SLDVAFVSCGAEHTAVLT 269

Query: 340 SSGYVYTWGKGYCGALGH 357
            +G VYT+G    G LG 
Sbjct: 270 QNGSVYTFGDDSAGQLGR 287



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAA 276
           V  G   T  L   G V +CG N+ GQLG     G       P+ I  LE    VV ++ 
Sbjct: 42  VACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALE-TQKVVHVSC 100

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + LAV   G VYS+G+G+   LG GE  D L P+ I    +    V++V+ G +H +
Sbjct: 101 GKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSK--YKVIQVACGHDHSI 158

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSL 372
           AL + G +++WG+   G LG G +I  +  P+ +S+L
Sbjct: 159 ALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSAL 195



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 237 VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSF 293
           ++  G  + GQLG   G+ +  P P    P      +VV +A G  + L +  +G V S 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 294 GSGSNFCLGH----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           G  S   LG     G++     P  IQ    +   VV VS G EH +A+ + G VY+WG 
Sbjct: 62  GDNSRGQLGRRLPSGQEKRSYGPELIQALETQ--KVVHVSCGKEHSLAVCNKGRVYSWGA 119

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LG G+  D+ +P+ +++L  +  +Q
Sbjct: 120 GTFGQLGTGELGDRLIPKTINALSKYKVIQ 149



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 9/189 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H++ ++N   +FS G ++ G LG G + +   S  +++      + QV+A  
Sbjct: 148 IQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGG 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG V+  G N++   G         IF+P  + AL+ +    V+ G   T  
Sbjct: 208 AHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAV 267

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPLEEVGSVVQIAAGPSY--MLAVTGN 287
           LT  G V+T G ++ GQLG   +    +PK     +E +   V + A  SY  ++ ++ +
Sbjct: 268 LTQNGSVYTFGDDSAGQLGRNSS---SSPKFGPQKVEWIDGPVSLLACGSYHTLVRISTS 324

Query: 288 GVVYSFGSG 296
           G + SFG G
Sbjct: 325 GQLLSFGRG 333


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 22/229 (9%)

Query: 162 AAHVVQVSA---SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           AA V+ VS+      HAA V + G VF  G+      GH   +  +  P+LV+AL GV  
Sbjct: 276 AAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNT 334

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIA 275
           + V  G   T  +T+ G ++T G++    G +GH + +    PK + +PLE V  +  IA
Sbjct: 335 ELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIA 393

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +   V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H 
Sbjct: 394 CGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHT 451

Query: 336 VALD------------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            A+             SSG ++TWG G    LGHGD+  K +P  +++L
Sbjct: 452 AAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAAL 500



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P     +  ++  
Sbjct: 337 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSPLEGVRISSIACG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +   G+  T  +
Sbjct: 396 AWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTVRAACGIWHTAAV 454

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 455 VEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY-NFRQVACGHS 513

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G V++ GS     LG+ +   ++         R    V  +  G  HV AL 
Sbjct: 514 LTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEEIGCGAHHVAALS 571

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 572 SKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 605



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 331 GVNTEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 388

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK      GL  +
Sbjct: 389 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLK------GLKTV 442

Query: 385 AEVC 388
              C
Sbjct: 443 RAAC 446



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 261 GAGSRVDSLVPKALQAAVV--LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 318

Query: 362 DKTLPEPLSSL 372
           D + P+ + +L
Sbjct: 319 DVSEPQLVQAL 329


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 132/325 (40%), Gaps = 56/325 (17%)

Query: 115 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 171 SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 206
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 207 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 265 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 367 EPLSSLKSHLAVQGLSVLAEVCPTI 391
             +          G+ VL   C T 
Sbjct: 348 RKVEGFG------GVPVLQVACGTF 366



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 27/295 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 164
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 165 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 212
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V  L  +  V
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGV 474



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 116/302 (38%), Gaps = 59/302 (19%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSAS 171
           +Q+  G +HTL ++   +VF+ G+ L    G G + +   V+  +      A V+ ++A 
Sbjct: 359 LQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAG 418

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 215
             H+A V   G +   G   S   GH D     F P+ V  L+                 
Sbjct: 419 PYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPF-PKYVADLRNRMYVSDLQSMLGVSRL 477

Query: 216 -----------VP-----------CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
                      VP            + +  G + T  LT  G V   GSN  GQLG G+ 
Sbjct: 478 KREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED 537

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           ++    + +        + +IA G  + LAV   G V+++G+  N  LG G      +P 
Sbjct: 538 VEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDS--------------SGYVYTWGKGYCGALGHGD 359
           A+   R      V V  GD++   + S               G ++ WG    G LG G+
Sbjct: 598 AVTALR----QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGE 653

Query: 360 EI 361
           ++
Sbjct: 654 DV 655



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 86/232 (37%), Gaps = 43/232 (18%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 286
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 287 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 317
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 318 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTP 734



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G  +  G+  +G+LG G T +  TP      + V  +  +AAG  + LA++ +G +
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDL 764

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVVALDSSGYVYTWG 348
           + +G   + C       + + PR       +G    V  +SA + H +A+  +G V+ WG
Sbjct: 765 WFWGRREDTC----STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820

Query: 349 KGYCGALGHGDEIDKTL--PEPLSSLKS 374
                  G G    + L  PE ++ L S
Sbjct: 821 DNKLYQTGCGKRQAERLDRPERVAGLPS 848


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS---SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  +S S     +  G+   G+LGHG E +  +    +N P     VV ++  
Sbjct: 254 VACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIP-KMVNGPLEGLQVVSIACG 312

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+A    +G++FT GD +    GH D    ++ P+ V+ L G+   +V  G+  T  +
Sbjct: 313 TWHSALATSNGKLFTFGDGAFGVLGHGD-QESVWYPKEVQLLTGLKTIKVACGVWHTAAI 371

Query: 232 ----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                     +    + T G     +LGHG+      P  +APL E  +  Q+  G +  
Sbjct: 372 IEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEY-NFHQVECGHNMT 430

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G   +  LG+     ++ P  +Q  +  G  V ++S G  HV  L + 
Sbjct: 431 IALTTSGHVFTMGGTEHGQLGNPMSLGKI-PTLVQD-KLLGEFVEKISCGAHHVAILTNK 488

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +YTWG G  G LGHGD  D+  P  + +LK
Sbjct: 489 SEIYTWGMGANGRLGHGDVEDRKSPTLVVALK 520



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 22/230 (9%)

Query: 149 TQCVSFTRINFPSAAH-----VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
           TQ  S T +  P A       V  ++   +H A   + G VFT G  S    GH   ++ 
Sbjct: 178 TQIPSKTDVLIPKALESNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGH-GIDKD 236

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKS 261
              P LVE L+G   + V  G   T  L+    ++T G  TH  G LGHG       PK 
Sbjct: 237 FSSPVLVEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKM 296

Query: 262 I-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  PLE +  VV IA G  +    T NG +++FG G+   LGHG+Q     P+ +Q    
Sbjct: 297 VNGPLEGL-QVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLL-- 353

Query: 321 KGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALGHGDE 360
            G+  ++V+ G  H  A+           SS  ++TWG G    LGHG++
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNK 403



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   +    ++V+  
Sbjct: 307 VSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ--ESVWYPKEVQLLTGLKTIKVACG 364

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +      +P  V  L      QV
Sbjct: 365 VWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGN-KETYLQPTRVAPLMEYNFHQV 423

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSY 280
             G N T  LT  GHV T G   HGQLG+  +L + PT      L E   V +I+ G  +
Sbjct: 424 ECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF--VEKISCGAHH 481

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    +Y++G G+N  LGHG+  D   P  +   + + I  V
Sbjct: 482 VAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNV 527



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 11/134 (8%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           PK++     V  V  IA G  ++   T  G V+++G  S   LGHG   D   P  ++  
Sbjct: 189 PKALE--SNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFL 246

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHL 376
             +G +   V+ G+ H  AL  S  +YTWG G    G LGHG E    +P+ ++      
Sbjct: 247 --EGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNG----- 299

Query: 377 AVQGLSVLAEVCPT 390
            ++GL V++  C T
Sbjct: 300 PLEGLQVVSIACGT 313



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 15/171 (8%)

Query: 109 TSAGNMQITTGRYHTLLI--------SNSS---VFSCGSSLCGVLGHGPETTQCVSFTRI 157
           T    +++  G +HT  I        SNSS   +F+ G      LGHG + T  +  TR+
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETY-LQPTRV 412

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGV 216
                 +  QV    N    +  SG VFT G       G+  +   I  P LV + L G 
Sbjct: 413 APLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKI--PTLVQDKLLGE 470

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             ++++ G +    LT +  ++T G   +G+LGHGD  DR +P  +  L++
Sbjct: 471 FVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKD 521


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 33/293 (11%)

Query: 97  LQSVEHSSDIV----ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQC 151
           LQ+V   SD V     T +G      G  HTL L +N +V++ G    G LG+G  T   
Sbjct: 21  LQAVADESDSVVAAKSTYSGIRMAAGGESHTLALNANGTVWAWGG---GQLGNGSTTGSP 77

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPR 208
                 +  S   V  ++A  +H   +   G V+  G N     G   T   N P+    
Sbjct: 78  APVQVQDLHS---VEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPV---- 130

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            VE L+ +    V A  ++   L ++  G V   G N +GQLG G   DR TP  +  L+
Sbjct: 131 QVEGLRSI----VGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLD 186

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-V 325
              SVV I++G  Y LAV  +G V+++G      LG+G       P  +Q     G+H V
Sbjct: 187 ---SVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQ-----GLHSV 238

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             V++GD H +A+   G V++WG    G LG G ++D+  P  +    S + V
Sbjct: 239 TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEGFSSAVDV 291



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L L S+ +V++ G +  G LG G +T +    T +       VV +S+   ++  V  
Sbjct: 147 HSLALKSDGTVWAWGRNEYGQLGDGSKTDR---HTPVRVKGLDSVVAISSGFGYSLAVKS 203

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  G N     G+  T +    P  V+ L  V    V +G      +   G V + 
Sbjct: 204 DGTVWAWGKNEYGQLGNGSTTQSS-APVQVQGLHSVTA--VASGDYHNLAIKRDGTVWSW 260

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G  +DR TP  +   E   S V + AG  + LA+  +G V+++G+     
Sbjct: 261 GPNLAGQLGDGSDMDRYTPVQV---EGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNE 317

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            G G       P  +Q        VV ++AG +H +A+ + G V+ WGK   G LG G  
Sbjct: 318 WGFGSS----TPVQVQELDS----VVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTS 369

Query: 361 IDKTLP 366
             +  P
Sbjct: 370 TARLTP 375



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 16/205 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I++G  ++L + S+ +V++ G +  G LG+G  TTQ  +  ++       V  V++ + H
Sbjct: 191 ISSGFGYSLAVKSDGTVWAWGKNEYGQLGNG-STTQSSAPVQVQ--GLHSVTAVASGDYH 247

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              + + G V++ G N +   G   D +R  + P  VE         V AG   +  L  
Sbjct: 248 NLAIKRDGTVWSWGPNLAGQLGDGSDMDR--YTPVQVEGFSS--AVDVDAGFGHSLALKS 303

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G+    + G G +    TP  +   +E+ SVV IAAG  + LAV  +G V+++
Sbjct: 304 DGTVWAWGNYQFNEWGFGSS----TPVQV---QELDSVVDIAAGTQHSLAVRNDGTVWAW 356

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTF 318
           G   N  LG G     L P  +Q F
Sbjct: 357 GKNDNGQLGDGTSTARLTPIKVQGF 381


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 132/325 (40%), Gaps = 56/325 (17%)

Query: 115 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 171 SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 206
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 207 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 265 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 367 EPLSSLKSHLAVQGLSVLAEVCPTI 391
             +          G+ VL   C T 
Sbjct: 348 RKVEGFG------GVPVLQVACGTF 366



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 27/295 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 164
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 165 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 212
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V  L  +  V
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGV 474



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 116/302 (38%), Gaps = 59/302 (19%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSAS 171
           +Q+  G +HTL ++   +VF+ G+ L    G G + +   V+  +      A V+ ++A 
Sbjct: 359 LQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAG 418

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 215
             H+A V   G +   G   S   GH D     F P+ V  L+                 
Sbjct: 419 PYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPF-PKYVADLRNRMYVSDLQSMLGVSRL 477

Query: 216 -----------VP-----------CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
                      VP            + +  G + T  LT  G V   GSN  GQLG G+ 
Sbjct: 478 KREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED 537

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           ++    + +        + +IA G  + LAV   G V+++G+  N  LG G      +P 
Sbjct: 538 VEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDS--------------SGYVYTWGKGYCGALGHGD 359
           A+   R      V V  GD++   + S               G ++ WG    G LG G+
Sbjct: 598 AVTALR----QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGE 653

Query: 360 EI 361
           ++
Sbjct: 654 DV 655



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 86/232 (37%), Gaps = 43/232 (18%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 286
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 287 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 317
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 318 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTP 734



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G  +  G+  +G+LG G T +  TP      + V  +  +AAG  + LA++ +G +
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDL 764

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVVALDSSGYVYTWG 348
           + +G   + C       + + PR       +G    V  +SA + H +A+  +G V+ WG
Sbjct: 765 WFWGRREDTC----STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820

Query: 349 KGYCGALGHGDEIDKTL--PEPLSSLKS 374
                  G G    + L  PE ++ L S
Sbjct: 821 DNKLYQTGCGKRQAERLDRPERVAGLPS 848


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   V+ I+ G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 TPVVVEKDRI 310



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 3/202 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N S C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + V+ +S G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNISCGQMCSMAVVDTGEVYVWGYNG 233

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LG G   ++  P  +++L+
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQ 255



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T +G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
                 V+ V+ G  H + L S G V+ WG    G +G G   ++ +P  ++    +  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 379 QGLS 382
             +S
Sbjct: 208 MNIS 211


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 20/261 (7%)

Query: 112 GNMQ-ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
            N+Q I  G+Y T ++  N S+  CG    G LG G    Q        FP    V  ++
Sbjct: 99  NNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMA 158

Query: 170 AS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            S   + H+  V ++G+V++ G+      GH + N     P+L+  L     + V+ G  
Sbjct: 159 TSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGN-NTTQKTPKLIAGLSNKVIRSVSCGNR 217

Query: 227 FTGFLTIRGHVHTCGSNTHGQL--------GHGDTLDRPTPKSIAPLEEVGSVVQ-IAAG 277
            +  +TI   + T G   HG+L        GHGDT  +  PK I  L+  G ++Q ++A 
Sbjct: 218 HSAAVTIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALK--GQLIQKVSAA 275

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + +A+T  G +YSFG GS   LG  +      P+ IQ+     + ++ V+ GD H +A
Sbjct: 276 NQFSIALTKTGKLYSFGKGSGTGLGTPDTSYS-TPQLIQSL--ADVIIIDVTTGDGHCLA 332

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           L   G VY WG    G  G G
Sbjct: 333 LTQRGDVYGWGTNSMGQCGQG 353



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 14/225 (6%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L +  N  V+S G    G LGHG  TTQ      I   S   +  VS    H+A V  
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTP-KLIAGLSNKVIRSVSCGNRHSAAVTI 224

Query: 181 SGQVFTCGDNSSFCCGHRDTNR-------PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             +++T G+      GH DT R          +P+++EALKG   ++V+A   F+  LT 
Sbjct: 225 DNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTK 284

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +++ G  +   LG  DT    TP+ I  L +V  ++ +  G  + LA+T  G VY +
Sbjct: 285 TGKLYSFGKGSGTGLGTPDT-SYSTPQLIQSLADV-IIIDVTTGDGHCLALTQRGDVYGW 342

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           G+ S    G G  ++ + +P  ++     G+ V ++SAG  H + 
Sbjct: 343 GTNSMGQCGQGHNNNSISKPGKVEGL--DGVQVQQISAGTSHSIV 385



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 11/156 (7%)

Query: 213 LKGVPC------KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           LK  P       + + AG   T  +   G +  CG  ++G+LG G +  + + K +    
Sbjct: 90  LKATPVPHMNNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFP 149

Query: 267 E---VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           E   V S+        + LAV  NG VYS+G G    LGHG    +  P+ I     K I
Sbjct: 150 EGTLVKSMATSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVI 209

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
               VS G+ H  A+     ++TWG+G  G LGHGD
Sbjct: 210 R--SVSCGNRHSAAVTIDNELWTWGEGEHGRLGHGD 243



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 12/147 (8%)

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V++ G   +G+LGHG+   + TPK IA L     +  ++ G  +  AVT +  ++++
Sbjct: 173 NGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSN-KVIRSVSCGNRHSAAVTIDNELWTW 231

Query: 294 GSGSNFCLGHGEQ--------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           G G +  LGHG+           +++P+ I+    KG  + +VSA ++  +AL  +G +Y
Sbjct: 232 GEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEAL--KGQLIQKVSAANQFSIALTKTGKLY 289

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSL 372
           ++GKG    LG  D    T P+ + SL
Sbjct: 290 SFGKGSGTGLGTPDTSYST-PQLIQSL 315



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           + F G L    +    GSN+  QL  G T  L + TP     +  + ++  I AG     
Sbjct: 60  MEFIGQLICEAYAF--GSNSSHQLAMGSTEKLLKATP-----VPHMNNIQSIIAGQYCTF 112

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVAL 338
            V  NG +   G GS   LG G    +   + + TF      K +   R S G  H +A+
Sbjct: 113 MVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMATSRGSDG--HSLAV 170

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           D +G VY+WG+G  G LGHG+   +  P+ ++ L + +
Sbjct: 171 DKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKV 208


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 16/260 (6%)

Query: 117 TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           + G  H++ ++ + SV++ GS+  G LG G  T + V    +  P  + VV V+A+ +  
Sbjct: 201 SAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVP---VQVPGMSDVVAVAAAGSRT 257

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
             +   G V+T G NSS   G   T   +  P  V  L GV    + AGL  T  +   G
Sbjct: 258 VALKADGTVWTWGINSSGELGDGTTTHSLL-PIQVPNLSGV--TNIAAGLWHTLAVKKDG 314

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
              + G+N +GQLG G TL+R  P  +A L     V  ++ G  + +A+  +G  + +G 
Sbjct: 315 SAWSWGNNAYGQLGDGTTLNRLRPVLVAGLT---GVRALSGGVVHTVALKWDGTAWGWGY 371

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            S   LG+G   +   P  +    +     V + AG  H +A    G +Y WG  + GAL
Sbjct: 372 NSAGQLGNGTTTNSSIPVQVAALTQA----VEIDAGGYHTLARRQDGTLYAWGDNFYGAL 427

Query: 356 GHGDEIDKTLP--EPLSSLK 373
           G G+    ++P   PLS ++
Sbjct: 428 GTGNTTSSSVPVQVPLSGVR 447



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 128/275 (46%), Gaps = 19/275 (6%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           S IV+T+ G+       +   L +  +V++ G +  G LG+G   T     T    P  +
Sbjct: 499 SGIVKTAGGSA------HSVALGAGGAVWTWGYNAYGQLGNG---TTTQVVTPTQLPGMS 549

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ V+A  NH   +   G V   G N+    G+  T   +  P+ V  L GV    ++A
Sbjct: 550 GVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQL-TPQSVPELDGVTA--ISA 606

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  L   G V   GSN +GQLG G    R +P  +  LE   +VV IAAG  + +A
Sbjct: 607 GSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLE---NVVSIAAGHFHTVA 663

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V G+G ++ +G G    LG G   ++  P  +        H V ++AG  H VAL ++G 
Sbjct: 664 VKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG----HAVAIAAGGYHTVALLANGQ 719

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           V+TWG    G LG    I +  P  +  L + +A+
Sbjct: 720 VWTWGYNSSGQLGDATIIQRYSPVLVPGLTNVIAL 754



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 14/249 (5%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++F+ G +  G LG G  TTQ  S T +     + +V+ +    H+  +   G V+T G 
Sbjct: 470 TLFAWGHNTNGELGDG-TTTQRTSPTAV---VVSGIVKTAGGSAHSVALGAGGAVWTWGY 525

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N+    G+  T + +   +L   + GV    V AG+N T  L+  G V   G N +GQLG
Sbjct: 526 NAYGQLGNGTTTQVVTPTQL-PGMSGV--IDVAAGVNHTVALSADGTVAAWGYNAYGQLG 582

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           +G T ++ TP+S+  L+    V  I+AG ++ +A+  +G V+++GS     LG G     
Sbjct: 583 NGTTANQLTPQSVPELD---GVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHR 639

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             P  + +      +VV ++AG  H VA+   G ++ WG G  G LG G   ++++P  +
Sbjct: 640 SSPVQVPSLE----NVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQV 695

Query: 370 SSLKSHLAV 378
           S L   +A+
Sbjct: 696 SGLGHAVAI 704



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 12/214 (5%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           VS    H   V   G ++  G+N S   G+ + T R    P  V  L  V     +AG  
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRN--APTRVRGLNQV--VSASAGAE 205

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  +T  G V T GSN +GQLG G    R  P  +  + +V   V +AA  S  +A+  
Sbjct: 206 HSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDV---VAVAAAGSRTVALKA 262

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++G  S+  LG G     L P  IQ     G  V  ++AG  H +A+   G  ++
Sbjct: 263 DGTVWTWGINSSGELGDGTTTHSLLP--IQVPNLSG--VTNIAAGLWHTLAVKKDGSAWS 318

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           WG    G LG G  +++  P  ++ L    A+ G
Sbjct: 319 WGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSG 352



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 17/263 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  HT+ L ++ +V++ GS+L G LG G  T +    + +  PS  +VV ++A
Sbjct: 600 GVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRS---SPVQVPSLENVVSIAA 656

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H   V   G ++  G       G    TN+ +  P  V  L       + AG   T 
Sbjct: 657 GHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV--PVQVSGLG--HAVAIAAGGYHTV 712

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V T G N+ GQLG    + R +P  +  L    +V+ +AAG      +  +G 
Sbjct: 713 ALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLT---NVIALAAGGYTTAVLKRDGT 769

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++FG   N  LG G       P A  T       VV +S+G  H++ L    +V   G 
Sbjct: 770 VWAFGYNPNGQLGDGTTTSRSSPTA--TLMNS---VVDLSSGVNHMMGLRKDAWVRACGY 824

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
              G LG G    +  P  +++L
Sbjct: 825 NSAGQLGDGTTTQRPTPVQVTNL 847



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           C  V+ G+  T  +   G +   G+N  GQLG+G    R  P  +  L +   VV  +AG
Sbjct: 147 CPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQ---VVSASAG 203

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + +AVT +G V+++GS +   LG G       P  +         VV V+A     VA
Sbjct: 204 AEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMS----DVVAVAAAGSRTVA 259

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           L + G V+TWG    G LG G      LP  + +L 
Sbjct: 260 LKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLS 295



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ L++N  V++ G +  G LG   + T    ++ +  P   +V+ ++A  
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATIIQRYSPVLVPGLTNVIALAAGG 758

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              A + + G V+  G N +   G    T+R      L+ ++       +++G+N    L
Sbjct: 759 YTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVV-----DLSSGVNHMMGL 813

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                V  CG N+ GQLG G T  RPTP  +  L   GS+V
Sbjct: 814 RKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNLPGDGSIV 854


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 118/229 (51%), Gaps = 11/229 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L G+P  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG   T  + +P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDN-QKVEFLACGGSHTALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A  S  G 
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--AGNRVTQIACGRWHTLAYVSDLGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
           V+++G G  G LG+G   D+ +P P+          +SH + + L ++A
Sbjct: 317 VFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIA 365



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 4/238 (1%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +++ G N     G  D       P L+EAL     + +  G + T  LT
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLG-LDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVY 291
             G + T G+  HGQLGH  T +   P  +A L     V QIA G  + LA V+  G V+
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAG-NRVTQIACGRWHTLAYVSDLGKVF 318

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           SFGSG    LG+G   D+L P  ++    + +     ++  E ++    +  +  W K
Sbjct: 319 SFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGENQSILLWIK 376


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 26/292 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +  + I  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + +T +G V++ G   N   G  G  + + +P  +   +    HV++V+ G  HV  L S
Sbjct: 312 VGLTTSGKVWTMG---NSVYGQLGNPNSDGRP-CLVGDKITNEHVLQVACGSYHVSVLTS 367

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
              V+TWGKG  G LGHGD  D+ +P  + +LK     H+A  G +  A +C
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIAC-GANFTAAIC 418



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V +SG+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG  +    P+ I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   S+G ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 256 VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASL 296



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 7/199 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGALEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGL 381
           V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+     G+
Sbjct: 186 VAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 382 SVLAEVCPTIVQEDTRSCS 400
              A +   IV + + + S
Sbjct: 246 WHTAAIVEVIVTQSSATVS 264



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT +G V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P  +S      A++GL V    C T
Sbjct: 172 WIPRRISG-----ALEGLQVAYVSCGT 193


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 21/266 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGS--SLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  +++S  V++ G+  S   ++  G   +Q ++  +++ P     +  ++  
Sbjct: 361 VACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTH-KLSLPVEGISISSIACG 419

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 229
           E H A V   G++FT GD +    GH  +      P+ VE+LKG+  + V  G   T   
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGH-GSYHSFSSPKEVESLKGLCVRSVACGTWHTAAI 478

Query: 230 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                    + T  G + T G    G+LGH D +++  P  ++ L +    VQ++ G   
Sbjct: 479 IEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY-DFVQVSCGRMM 537

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+T  G V++ GS     LG+    D      +     K  +V  +S G  HV  L S
Sbjct: 538 TLALTNMGKVFAMGSAKYGQLGNPHVKDRA---VVVEGMLKQEYVKMISCGSYHVAVLTS 594

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG VYTWGKG  G LG GD  ++  P
Sbjct: 595 SGSVYTWGKGENGELGLGDTENRYTP 620



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 26/233 (11%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V+ L  +  K V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDTLSDIRVKNVACG 364

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-------TPKSIAPLEEVGSVVQIAAG 277
              T  LT  G V+  G++    +   D +D         T K   P+E + S+  IA G
Sbjct: 365 EYHTCALTDSGEVYAWGND----VSCSDLVDEGRIRSQWLTHKLSLPVEGI-SISSIACG 419

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +   V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESL--KGLCVRSVACGTWHTAA 477

Query: 338 L-----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           +            S+G ++TWG    G LGH D ++K +P  +S L  +  VQ
Sbjct: 478 IIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQ 530



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  + V  G N    +T +G V+  G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLS 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-----K 321
           ++  V  +A G  +  A+T +G VY++G+     +   +  DE + R+     +     +
Sbjct: 355 DI-RVKNVACGEYHTCALTDSGEVYAWGND----VSCSDLVDEGRIRSQWLTHKLSLPVE 409

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           GI +  ++ G+ H   + S G ++T+G G  G LGHG     + P+ + SLK      GL
Sbjct: 410 GISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLK------GL 463

Query: 382 SVLAEVCPT 390
            V +  C T
Sbjct: 464 CVRSVACGT 472



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           + V  V+ G  H   +   G VY WG+G CG LG   ++D + P+ + +L S + V+ ++
Sbjct: 304 LDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTL-SDIRVKNVA 362

Query: 383 -------VLAEVCPTIVQEDTRSCSDII 403
                   L +        +  SCSD++
Sbjct: 363 CGEYHTCALTDSGEVYAWGNDVSCSDLV 390


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVS-ASENH 174
           T+      + S+  V++ G +    LG G   +QC +   +++  S   VV +S  S  H
Sbjct: 29  TSANEAIYITSDDEVYAFGLNCSNCLGTGD--SQCTIVPKKVDILSGRKVVSLSYGSGPH 86

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTI 233
                + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT 
Sbjct: 87  ILLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSATLLNRKVTEVACGSHHSMALTD 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +     +G+ V +V +G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQVVSGYAHSLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHL 376
            LG G++ ++  P  + + K  +
Sbjct: 264 QLGTGNKSNQLSPVQIMTEKERI 286



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 8/153 (5%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 288
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 36  YITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 94

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            ++++G      LG+G  +  + P  +      RK   V  V+ G  H +AL  SG VY 
Sbjct: 95  ELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRK---VTEVACGSHHSMALTDSGEVYA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
           WG   CG +G G   ++  P  +SS L++ +AV
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAV 184


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 4/222 (1%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCK 219
           S   V QV+    H   + + GQV+T G NS    G  ++    I  P+ V +L  +P  
Sbjct: 120 SGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVV 179

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV+AG + +  L++ G V   G N  GQLG GDT DR TP  +  L  +   V  A G  
Sbjct: 180 QVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLN-MKKTVFAACGKD 238

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +   +T +G V++FGSG    LGH    + L PR +      G  V +++ G  H + L 
Sbjct: 239 HTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELW--GAKVTKIACGRYHTLVLT 296

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
               VY++G    G LG  +E    +P P+   +    +Q +
Sbjct: 297 DHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREGPIIQNI 338



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 83/170 (48%), Gaps = 12/170 (7%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC    D+  P F PR +EAL G+   QV  G   T  L+  G V+T G N+ GQLG G 
Sbjct: 102 FCV---DSPHPPFTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGK 158

Query: 253 T--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHD 308
                  +P+ +  L  +  VVQ++AG  +  A++ +G V  FG G N C  LG G+  D
Sbjct: 159 EGCSSISSPQCVRSLSSM-PVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTD 215

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              P  +     K    V  + G +H   L   G V+T+G G+ G LGH 
Sbjct: 216 RETPTLVHYLNMK--KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHN 263



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 7/226 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 172
           Q+  G  HT+++S +  V++ G +  G LG G E    +S  + +   S+  VVQVSA  
Sbjct: 126 QVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGG 185

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H+  +  SG VF  G N     G  DT +R    P LV  L          G + T  L
Sbjct: 186 DHSFALSVSGSVFGWGRNDCGQLGLGDTTDRET--PTLVHYLNMKKTVFAACGKDHTAVL 243

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T+ G V T GS  +GQLGH    +   P+ +A L     V +IA G  + L +T +  VY
Sbjct: 244 TMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWG-AKVTKIACGRYHTLVLTDHMKVY 302

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           SFG   +  LG  E+     P  +Q   R+G  +  + AG +   A
Sbjct: 303 SFGCNEHGQLGPREETHPCVPLPVQ-LPREGPIIQNIFAGGDSSFA 347



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 5/111 (4%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAI 315
           TP+S+  L  + +V Q+A G  + + ++ +G VY++G  S   LG G++       P+ +
Sbjct: 112 TPRSLEALSGI-TVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           ++     + VV+VSAG +H  AL  SG V+ WG+  CG LG GD  D+  P
Sbjct: 171 RSL--SSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETP 219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 3/137 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H+  +S S SVF  G + CG LG G +TT   + T +++ +    V  +  +
Sbjct: 179 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLG-DTTDRETPTLVHYLNMKKTVFAACGK 237

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A +   G VFT G       GH ++ R    PRLV  L G    ++  G   T  LT
Sbjct: 238 DHTAVLTMDGTVFTFGSGHYGQLGH-NSFRNALCPRLVAELWGAKVTKIACGRYHTLVLT 296

Query: 233 IRGHVHTCGSNTHGQLG 249
               V++ G N HGQLG
Sbjct: 297 DHMKVYSFGCNEHGQLG 313


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 17/225 (7%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   VV V+     +  +L +G V+T G +     G+          R       VP   
Sbjct: 39  SQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKR-------VPIYN 91

Query: 221 VTAGLN-FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           VT+  + F     ++  G V T G N +GQLG G T+D  TP  +  L   G+V  +A G
Sbjct: 92  VTSVDSCFASVAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGL---GNVRAVAVG 148

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+MLA+  +G V+++G  +   LG G   D + P  +    R    +V +SAG  H +A
Sbjct: 149 ISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLPR----IVAISAGYNHNLA 204

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           +D +G V+TWG   CG LG G  I    P+ +  L +  AV G S
Sbjct: 205 IDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGLANVTAVAGGS 249



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 36/280 (12%)

Query: 99  SVEHSSDIVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +++H++  +    GN++ +  G  H L + N  +V++ G + CG LG G   T   S T 
Sbjct: 127 TMDHNTPGMVGGLGNVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDG---TNVDSMTP 183

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALK 214
           +       +V +SA  NH   +  +G V+T G N    CG     TN     P+ V+ L 
Sbjct: 184 VRVSGLPRIVAISAGYNHNLAIDDAGNVWTWGLND---CGQLGDGTNISSPNPKKVKGLA 240

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
            V    V  G +F+  L   G +   GSN  G+LG G T D P P  +  L    +V++I
Sbjct: 241 NVTA--VAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKVQGLT---NVIRI 295

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-------HDELQPRAIQTFRRKGIHVVR 327
           AAG     A+T +G ++ +        GH EQ        D   PR     R  G+  V+
Sbjct: 296 AAGGETSAAITNDGSLWVW--------GHNEQGKYISGGEDASSPR-----RASGLSNVK 342

Query: 328 -VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            V  G  +++AL++ G ++  G    G LG G+  D+ +P
Sbjct: 343 LVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMP 382



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           +   L  + ++++ GS++ G LG G  T  C    ++      +V++++A    +A +  
Sbjct: 251 FSLALKDDGTIWAWGSNVQGELGVG-TTKDCPLPVKVQ--GLTNVIRIAAGGETSAAITN 307

Query: 181 SGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            G ++  G N    +  G  D + P    R    L  V  K V  G      L   G + 
Sbjct: 308 DGSLWVWGHNEQGKYISGGEDASSP----RRASGLSNV--KLVDIGTINIIALENDGSLW 361

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             G N  GQLG G+T DR  P  +A    VG
Sbjct: 362 VVGDNQFGQLGTGNTYDRNMPARVAIGSNVG 392


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 147/340 (43%), Gaps = 29/340 (8%)

Query: 46  HGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSD 105
           + L P+   S   L    + AL   +A ++   Q E+    +G W R+ + +     S  
Sbjct: 291 YSLVPKLLESTAMLDVHNI-ALGGKHAALATK-QGEVFCWGHGKWGRLGQKIDMDISSPK 348

Query: 106 IVETSAG--NMQITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP 160
           IV++  G     +  G YHT  +++S  V++ G+ +C   +L  G   +Q +        
Sbjct: 349 IVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSL 408

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               +  V+  E H A V   G++FT GD +    GH D  R    P+ VE+L G+  + 
Sbjct: 409 DGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLSGLRVRS 467

Query: 221 VTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
              G   T            + +  G + T G    G+LGH D   +  P  +  L +  
Sbjct: 468 AACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDY- 526

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVV 326
             VQ++ G    +A+T  G V++ GS     LG+    D+   ++ +  Q F      V 
Sbjct: 527 DFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEF------VK 580

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +S G  HV  L S G VYTWG+G  G LG GD  D+  P
Sbjct: 581 VISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTP 620



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 16/220 (7%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA   + G+VF  G       G +  +  I  P++V++L G+  K V  G   T  LT
Sbjct: 314 KHAALATKQGEVFCWGHGKWGRLGQK-IDMDISSPKIVDSLNGLHVKNVACGEYHTCALT 372

Query: 233 IRGHVHTCGSNT--HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G V+T G++      L  G T  +  P+ +    +  S+  +A G  +   V+  G +
Sbjct: 373 DSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSSCGRL 432

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           +++G G+   LGHG+      P+ +++    G+ V   + G  H  A+            
Sbjct: 433 FTYGDGTFGVLGHGDLRSYSSPKEVESL--SGLRVRSAACGSWHTAAIVEVMFDRFRYNS 490

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           +SG ++TWG G  G LGH D   K +P  ++ L  +  VQ
Sbjct: 491 ASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQ 530



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 18/224 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT ++S+   +F+ G    GVLGHG       P+  + +S  R+   +      
Sbjct: 416 VACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHT 475

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V    +   +   SG++FT GD      GH D    +  P  V  L      QV+
Sbjct: 476 AAIVEVMF--DRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLV-PTRVTQLVDYDFVQVS 532

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V   GS  +GQLG+    D+         +E   V  I+ G  ++ 
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEFVKV--ISTGSYHVA 590

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T  G VY++G G N  LG G+  D   P  ++  R + ++ +
Sbjct: 591 VLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTI 634



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 14/186 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +    +  G       T +G V   G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC----LGHGEQHDELQPRAIQTFRRKG 322
            +  V  +A G  +  A+T +G VY++G+  + C    L  G    +  P+ +      G
Sbjct: 355 GL-HVKNVACGEYHTCALTDSGEVYTWGN--DVCCADLLIEGRTRSQWIPQKLGG-SLDG 410

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           I +  V+ G+ H   + S G ++T+G G  G LGHGD    + P+ + SL       GL 
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESL------SGLR 464

Query: 383 VLAEVC 388
           V +  C
Sbjct: 465 VRSAAC 470



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 18/187 (9%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H++ IVE     +     RY++   ++  +F+ G    G LGH    ++ V  TR+    
Sbjct: 474 HTAAIVE-----VMFDRFRYNS---ASGKLFTWGDGDEGRLGHVDNGSKLVP-TRVTQLV 524

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR--LVEA-LKGVPC 218
               VQVS        +   G+VF  G       G+     P  R +  +VE  LK    
Sbjct: 525 DYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGN-----PHARDKAVMVEGQLKQEFV 579

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ G      LT  G V+T G   +GQLG GDT DR TP  +  L +   V  I  GP
Sbjct: 580 KVISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDR-QVNTITCGP 638

Query: 279 SYMLAVT 285
           S+  A++
Sbjct: 639 SFTAAIS 645


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 118/267 (44%), Gaps = 20/267 (7%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT  L+S+  V   G +  G LG G  T +         PS   V  ++A   H
Sbjct: 364 IAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPSG--VTAIAAGRLH 421

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                 SG V+  GDNS    G     D++ P+    L   ++      + AG   T  L
Sbjct: 422 TCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVE-----TIAAGGWHTCAL 476

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G N  GQLG G T+   TP +++ L     V  IAAG  +  A+TG+G V+
Sbjct: 477 TGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS--GVTAIAAGGVHTCALTGSGGVW 534

Query: 292 SFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            +G   NF   LG G   D   P A+         V  ++AGD H  AL  SG V+ WG 
Sbjct: 535 CWGG--NFAGQLGDGTTTDRSTPVAVSGLPSG---VTAIAAGDIHTCALTGSGGVWCWGG 589

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHL 376
              G LG G   +++ P  +S L S +
Sbjct: 590 NDFGQLGDGTTTNRSTPVAVSGLPSGV 616



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 120/274 (43%), Gaps = 24/274 (8%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 308 SGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSG--VETIA 365

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-----PIFRPRLVEALKGVP--CKQVT 222
           A + H   ++ SG V         C GH D  +        R   V A+ G+P     + 
Sbjct: 366 AGDYHTCALMSSGGVR--------CWGHNDRGQLGDGTTTARSTPV-AVSGLPSGVTAIA 416

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T   T  G V   G N+ GQLG G   D  TP +++ L     V  IAAG  +  
Sbjct: 417 AGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLAS--GVETIAAGGWHTC 474

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+TG+G V+ +G  ++  LG G     + P A+         V  ++AG  H  AL  SG
Sbjct: 475 ALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGGVHTCALTGSG 531

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            V+ WG  + G LG G   D++ P  +S L S +
Sbjct: 532 GVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSGV 565



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 118/272 (43%), Gaps = 20/272 (7%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L S+  V+  GS+  G LG G  TT+         PS   V  ++
Sbjct: 104 SGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG--VTAIA 161

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCK--QVTAG 224
           A   H      SG V+  G N     G     D + P+       A+ G+P +   + AG
Sbjct: 162 AGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPV-------AVSGLPSEVTAIAAG 214

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T      G V   G N +GQLG G   D  TP +++ L     V  IAAG  +  A+
Sbjct: 215 DAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPS--GVTAIAAGGVHTCAL 272

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           TG+G V  +G+  +  LG+G       P A+         V  ++AGD H  AL  SG V
Sbjct: 273 TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGDYHTCALTGSGGV 329

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           + WG  Y G LG G    ++ P  +S L S +
Sbjct: 330 WCWGGNYSGQLGDGTTTARSTPVAVSGLPSGV 361



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 115/262 (43%), Gaps = 21/262 (8%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 512 SGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG--VTAIA 569

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVP--CKQVTAG 224
           A + H   +  SG V+  G N     G    TNR  P+       A+ G+P     + AG
Sbjct: 570 AGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPV-------AVSGLPSGVTAIAAG 622

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           L +T  LT  G V   G N  GQL  G T  R TP +++ L     V  IAAG  Y  A 
Sbjct: 623 LRYTCALTGSGGVWCWGYNLSGQLDDG-TTSRSTPVAVSGLPS--GVTAIAAGGWYTCAR 679

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V  +G+  +  LG G       P A+         V  ++AG EH  AL SSG V
Sbjct: 680 TSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPSG---VTAIAAGGEHTCALMSSGGV 736

Query: 345 YTWGKGYCGALGHGDEIDKTLP 366
           + WG+   G LG G  + +T P
Sbjct: 737 WCWGRNDSGQLGDGRPLYRTTP 758



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 115/273 (42%), Gaps = 21/273 (7%)

Query: 110 SAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           ++G   I  G +HT  ++ S  V+  G +  G LG G              PS   V  +
Sbjct: 460 ASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAI 517

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVP--CKQVTA 223
           +A   H   +  SG V+  G N +   G     D + P+       A+ G+P     + A
Sbjct: 518 AAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPV-------AVSGLPSGVTAIAA 570

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G N  GQLG G T +R TP +++ L     V  IAAG  Y  A
Sbjct: 571 GDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPS--GVTAIAAGLRYTCA 628

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +TG+G V+ +G   +  L  G       P A+         V  ++AG  +  A  SSG 
Sbjct: 629 LTGSGGVWCWGYNLSGQLDDGTTSRS-TPVAVSGLPSG---VTAIAAGGWYTCARTSSGG 684

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           V  WG    G LG G    ++ P  +S L S +
Sbjct: 685 VRCWGANGSGQLGDGTTTKRSTPVAVSGLPSGV 717



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 76/164 (46%), Gaps = 7/164 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T   T  G V   G N  G+LG G   D  TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPS--GVT 107

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG ++  A+T +G V+ +GS     LG G       P A+         V  ++AG 
Sbjct: 108 AIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG---VTAIAAGG 164

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            H  A  SSG V+ WG  Y G LG G   D++ P  +S L S +
Sbjct: 165 WHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEV 208



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 16/220 (7%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 563 SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSG--VTAIA 620

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR--PIFRPRLVEALKGVP--CKQVTAGL 225
           A   +   +  SG V+  G N S       T+R  P+       A+ G+P     + AG 
Sbjct: 621 AGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPV-------AVSGLPSGVTAIAAGG 673

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +T   T  G V   G+N  GQLG G T  R TP +++ L     V  IAAG  +  A+ 
Sbjct: 674 WYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPS--GVTAIAAGGEHTCALM 731

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            +G V+ +G   +  LG G       P  + T    G+++
Sbjct: 732 SSGGVWCWGRNDSGQLGDGRPLYRTTPVDVVTSASWGVYL 771


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 11/251 (4%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  HT LL  +  VF+ G +  G LG G  T      TRI    A  V QV+   
Sbjct: 28  LHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLG-HTKPVTKPTRIKSLKAEKVHQVACGR 86

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H     +SG++++ G N+    G    +  +  P +++ L+    K ++AG+  +  LT
Sbjct: 87  SHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSCVLT 146

Query: 233 IRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            +G V+  G    GQLG G D     TP+ +   +E   VV IA G  +   VT  G + 
Sbjct: 147 DKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDE---VVCIACGYYHTALVTAGGKLL 203

Query: 292 SFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +FG      LG G +  D   P+ +        HVV V+ G  H VA+ +   VYT+G G
Sbjct: 204 TFGETDEGKLGRGSDTGDNCLPKVVDGIEG---HVVSVACGGAHTVAI-TGWLVYTFGNG 259

Query: 351 YCGALGHGDEI 361
             G LGHG+ +
Sbjct: 260 SSGQLGHGNML 270



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 17/219 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           V+ +S  + H + +   G+VFT GDN+      GH    +P+ +P  +++LK     QV 
Sbjct: 27  VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGH---TKPVTKPTRIKSLKAEKVHQVA 83

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T   T  G +++ G N   QLG G D     +P  I  LE   +V  ++AG  + 
Sbjct: 84  CGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESH-AVKMLSAGMYHS 142

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGE---QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G VY +G G    LG GE   +H+  +   +         VV ++ G  H   +
Sbjct: 143 CVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDD------EVVCIACGYYHTALV 196

Query: 339 DSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHL 376
            + G + T+G+   G LG G D  D  LP+ +  ++ H+
Sbjct: 197 TAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEGHV 235



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 13/227 (5%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G YH+ +L    SV+  G    G LG G + T+  +  R++      VV ++    H
Sbjct: 135 LSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDD--EVVCIACGYYH 192

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG---LNFTGFL 231
            A V   G++ T G+      G          P++V+ ++G        G   +  TG+L
Sbjct: 193 TALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEGHVVSVACGGAHTVAITGWL 252

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                V+T G+ + GQLGHG+ L    TP  I   ++   V   + G ++   VT  G +
Sbjct: 253 -----VYTFGNGSSGQLGHGNMLLQADTPHKIV-WQKPTKVRSASCGENHTALVTDRGQL 306

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++ G G +  L  GE++   Q +   + R     V +VS G  H +A
Sbjct: 307 WTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLA 353



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           + +  G  HT+ I+   V++ G+   G LGHG    Q  +  +I +     V   S  EN
Sbjct: 236 VSVACGGAHTVAITGWLVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGEN 295

Query: 174 HAAFVLQSGQVFTCGD 189
           H A V   GQ++TCGD
Sbjct: 296 HTALVTDRGQLWTCGD 311



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ I+ G  +   + G+G V++FG  +   LG G      +P  I++ + + +H  +V+ 
Sbjct: 27  VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVH--QVAC 84

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQGLSV 383
           G  H +    SG +Y++G      LG G + +K   P  +  L+SH AV+ LS 
Sbjct: 85  GRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESH-AVKMLSA 137


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 112/213 (52%), Gaps = 11/213 (5%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG++F  G N     G          P++VE L GVP  Q++AG   +  L++ G++++ 
Sbjct: 89  SGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 148

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G T  + +P  I  L+    V  +A G S+   +T +G++++FG+G +  
Sbjct: 149 GKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGD 359
           LGH    +EL+P  +      G  V +++ G  H +A  S  G V+++G G  G LG+G 
Sbjct: 208 LGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGG 265

Query: 360 EIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
            +D+ +P P+         L+SH + + L ++A
Sbjct: 266 TLDQLIPLPVKVSSSEELKLESHTSEKELIMIA 298



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 9/224 (4%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +F+ G +L G LG G +     +   +   +   + Q+SA E H+  +  SG +++ G 
Sbjct: 91  ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGK 150

Query: 190 NS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           N       GH ++      P L+EAL     + +  G + +  LT  G + T G+  HGQ
Sbjct: 151 NEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 248 LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T +   P  +A L  VG+ V QIA G  + LA V+  G V+SFGSG +  LG+G 
Sbjct: 208 LGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGG 265

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
             D+L P  ++    + + +   ++  E ++    +  +  W K
Sbjct: 266 TLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIK 309



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 20/170 (11%)

Query: 207 PRLVEALK----GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PR +  L+    GV   QV AG    G  T  G +   G N HGQLG G    R  P + 
Sbjct: 60  PRRLAVLERGGAGVQVHQVLAGSG--GARTPSGELFAWGQNLHGQLGVG----RKFPSTT 113

Query: 263 AP--LEEVGSV--VQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQ 316
            P  +E +  V   QI+AG ++ +A++ +G +YS+G        LGH E  D   P  I+
Sbjct: 114 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--SPSLIE 171

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
               + +    ++ G  H   L   G ++T+G G  G LGH    ++  P
Sbjct: 172 ALDNQKVEF--LACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 219


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 95/201 (47%), Gaps = 12/201 (5%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK---QVTAGLNFTGF 230
           H+  V   G V+  GDNSS   G   TN+    P  V    G P     +V AG   +  
Sbjct: 66  HSLVVKNDGTVWAWGDNSSGQLG-IGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLA 124

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYMLAVT 285
           LT +G V T G N+ GQLG G   +R +P  +      PLE   ++V  A G  + LAV 
Sbjct: 125 LTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLE---NIVGAACGGKHSLAVA 181

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++GS S+  +G G   +   PR +  F +    V  V+AG  H +AL   G V+
Sbjct: 182 SDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVW 241

Query: 346 TWGKGYCGALGHGDEIDKTLP 366
            WG    G LG   + D+  P
Sbjct: 242 AWGDNEFGQLGDCSDYDRKAP 262



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 19/253 (7%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENH 174
           G YH+L++ N  +V++ G +  G LG G      +S  R+   S A    V++V+A E H
Sbjct: 63  GGYHSLVVKNDGTVWAWGDNSSGQLGIG-TNKASLSPVRVMHKSGAPLNGVLKVAAGERH 121

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPI----FRPRLVEALKGVPCKQVTAGLNF 227
           +  +   G+V+T GDNS    G     +   P+     R   +E + G  C     G   
Sbjct: 122 SLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAAC-----GGKH 176

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTG 286
           +  +   G V   GSN+ GQ+G G   +R  P+ +    + +  V  +AAG ++ LA++ 
Sbjct: 177 SLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSV 236

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           +G V+++G      LG    +D   P + + +  R   +VV ++AG    +AL   G V+
Sbjct: 237 DGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVW 296

Query: 346 TWGKGYCGALGHG 358
            WG    G LG G
Sbjct: 297 AWGNNGVGQLGMG 309



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 19/260 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSASENHAAF 177
           G++   + S+ +V++ GS+  G +G G    +      + F    A V  V+A   H+  
Sbjct: 174 GKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLA 233

Query: 178 VLQSGQVFTCGDNSSFC----CGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLT 232
           +   G V+  GDN  F     C   D   P+     V+  L  V    + AG  F+  LT
Sbjct: 234 LSVDGTVWAWGDNE-FGQLGDCSDYDRKAPVQVMHSVDRPLDNVVA--IAAGRAFSLALT 290

Query: 233 IRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G V   G+N  GQLG   H   +  P P   A    +  V  I A   + LA+  +G 
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGS 350

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V ++G+G    LG G Q+ E  P            V+ ++AG  H +A+  +G V  WG 
Sbjct: 351 VLAWGAGDRGQLGQGAQNHEDHPTLASLHS-----VICLAAGRYHSLAVAENGAVLAWGD 405

Query: 350 GYCGALGHG--DEIDKTLPE 367
              G LG G  D+    LPE
Sbjct: 406 NQKGQLGIGKADKNFHALPE 425



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 17/172 (9%)

Query: 217 PCKQVTAGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTP-----KSIAPLEEVGS 270
           P   + AG  +   +    G V   G N+ GQLG G      +P     KS APL     
Sbjct: 55  PVWGIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLN---G 111

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVS 329
           V+++AAG  + LA+T  G V+++G  S   LG G  ++   P  ++  R   + ++V  +
Sbjct: 112 VLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAA 171

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-------EPLSSLKS 374
            G +H +A+ S G V+ WG    G +G G   ++  P       +PL+ +K+
Sbjct: 172 CGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKA 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)

Query: 271 VVQIAAGPSY-MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VV 326
           V  IAAG  Y  L V  +G V+++G  S+  LG G     L P  ++   + G     V+
Sbjct: 56  VWGIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSP--VRVMHKSGAPLNGVL 113

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           +V+AG+ H +AL + G V+TWG    G LG G   ++  P  +  ++++
Sbjct: 114 KVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTN 162


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 14/278 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           HS  +V  ++G + ++ G   T+ + N  +V+S G +  G LG G   T   S + +   
Sbjct: 26  HSQKVVAGTSGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQVK 82

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               +  +SA   H   +   G V+T G   S   G   TN     P  +  L G+    
Sbjct: 83  GLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA-- 139

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG N T  L   G + + G N +GQLG G+T +   P  +    ++G +  I++G  +
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGGH 196

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            L +  +G V+S+G  +   LG+G   +   P  I         ++ VSAG  H  AL S
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALKS 252

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G V+ WG  + G L +G++ID  +P   + L   +A+
Sbjct: 253 DGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIAI 290



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 20/272 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  H + L S+ +V++ G    G LG G   T  +  T         +  +SA
Sbjct: 86  GITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG---TNSLRTTPAPINGLTGITAISA 142

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNF 227
             NH   +   G +++ G N     G  +T   N P+  P  +          +++G   
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG------ITSISSGGGH 196

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +   G V + G N  GQLG+G   + PTP  I+ L     ++ ++AG  +  A+  +
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN---GIINVSAGVIHSTALKSD 253

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G      L +G + D   P  +Q     GI  + ++AG E   A+ S G  + W
Sbjct: 254 GTVWNWGCNFRGELANGNKIDSYIP--VQANGLNGI--IAITAGWEFSSAIKSDGTFWVW 309

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G    G LG+G + D T P  +SSL    A+ 
Sbjct: 310 GVNDYGQLGNGSKSDVTSPMQVSSLSGITAID 341



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 16/270 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+
Sbjct: 136 GITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISS 192

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H+  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  + 
Sbjct: 193 GGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHST 248

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N  G+L +G+ +D   P     L     ++ I AG  +  A+  +G 
Sbjct: 249 ALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLN---GIIAITAGWEFSSAIKSDGT 305

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            + +G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +G+
Sbjct: 306 FWVWGVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAFGE 361

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              G LG+G     T PE +S   +++A  
Sbjct: 362 NTYGQLGNGTTTGSTTPELVSIGDTYVATD 391


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 128/284 (45%), Gaps = 24/284 (8%)

Query: 98   QSVEHSSDIVE--TSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            +++E S  +VE      N  +  G  HT LI N ++++ G ++ G LG GP      + +
Sbjct: 808  KTMESSGTLVELFNKKINSVLNCGYGHTALIRNGTIYTWGQTVKGCLGQGP------TMS 861

Query: 156  RINFPS--------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
            R + PS           V+ V+  +NH   +  +G V+  G +     G  D     + P
Sbjct: 862  RHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPY-P 919

Query: 208  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            RL+ +L       ++ G   T  LT +G V   G   HGQLG G+  D+  P  +  L++
Sbjct: 920  RLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKD 979

Query: 268  VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV- 326
               +  IAAG  + L ++  G ++SFGSG    LG G       P  IQ    K I +  
Sbjct: 980  -QVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIAT 1038

Query: 327  ----RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                 +S G  H   L  SG VYTWG+   G LG+G   + T P
Sbjct: 1039 GYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAP 1082



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIH 324
           +++ SV+    G +   A+  NG +Y++G     CLG G        P  I       + 
Sbjct: 822 KKINSVLNCGYGHT---ALIRNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLE 878

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           V+ V+ G  H  AL ++G VY WG    G LG GD  +   P  ++SL
Sbjct: 879 VLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSL 925


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 6/262 (2%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      + ++  V++ G +    LG G   +  V   +++  S   VV +S  S  H 
Sbjct: 44  TSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVP-KKVDILSGRKVVSLSYGSGPHI 102

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIR 234
               + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  
Sbjct: 103 LLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDS 161

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G
Sbjct: 162 GEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWG 221

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              N  LG G   ++L P  +     +G+ V ++ +G  H +AL   G +Y WG    G 
Sbjct: 222 YNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQ 279

Query: 355 LGHGDEIDKTLPEPLSSLKSHL 376
           LG G++ ++  P  + + K  +
Sbjct: 280 LGTGNKSNQLSPVQIMTEKERI 301



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 8/153 (5%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 288
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 51  YITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 109

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            ++++G      LG+G  +  + P  +      +K   V  V+ G  H +AL  SG VY 
Sbjct: 110 ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK---VTEVACGSHHSMALTDSGEVYA 166

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
           WG   CG +G G   ++  P  +SS L++ +AV
Sbjct: 167 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAV 199


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 18/272 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +  +++ G  +   G+LG+G + +  +            V  V+   
Sbjct: 333 VACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 392

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +  +GQ+FT GD +    GH D  + I  PR V++L G+    V  G+  T  + 
Sbjct: 393 WHTALISSTGQLFTFGDGTFGVLGHGD-KKSISYPREVDSLTGLRTIAVACGVWHTAAVV 451

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +  L +  +  +IA G S  
Sbjct: 452 EVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSIT 510

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V++ GS     LG+    D  QP  ++  +  G     V+ G  HV+ L S 
Sbjct: 511 IGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTSK 568

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 569 NEVYTWGKGANGRLGHGDVEDRKSPTLVESLK 600



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 16/206 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 287 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 345

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 346 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 405

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 340
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 406 TFGDGTFGVLGHGDKKSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 463

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG ++TWG G    LGHGD+  +  P
Sbjct: 464 SGKLFTWGDGDKNRLGHGDKEPRLKP 489



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +HT LIS++  +F+ G    GVLGHG +  + +S+ R ++  +    + V+    
Sbjct: 388 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVW 445

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 446 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 504

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 505 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 561

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 562 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 617


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 27/256 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 340 SSGYVYTWGKGYCGAL 355
             G V+T+G    G L
Sbjct: 252 EEGQVFTFGGNSSGQL 267



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 11/231 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             +G  + WG    G L   G+++ + + +P     S  A++ LSV+   C
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKP----HSIGALKNLSVIYISC 242



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 6/171 (3%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLK 373
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLE 178



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 15/247 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H++ + +   VF+ G+   G LG G         T+I   +   ++QVS    H
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A     YVYT G+  
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ-- 307

Query: 352 CGALGHG 358
             +LG G
Sbjct: 308 VVSLGRG 314


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 27/256 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 340 SSGYVYTWGKGYCGAL 355
             G V+T+G    G L
Sbjct: 252 EEGQVFTFGGNSSGQL 267



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 11/231 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             +G  + WG    G L   G+++ + + +P     S  A++ LSV+   C
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKP----HSIGALKNLSVIYISC 242



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 6/171 (3%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLK 373
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLE 178



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 15/247 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H++ + +   VF+ G+   G LG G         T+I   +   ++QVS    H
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A     YVYT G+  
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ-- 307

Query: 352 CGALGHG 358
             +LG G
Sbjct: 308 VVSLGRG 314


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 24/291 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 149 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGT 208

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +  +GQ+FT GD +    GH +    I  PR VE+L G+    V  G+  T  + 
Sbjct: 209 WHTALITSTGQLFTFGDGTFGVLGHGN-RESIPCPREVESLSGLKTIAVACGVWHTAAVV 267

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 268 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDY-DFHRIACGHSLT 326

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V+  G+     LG+     +L P  ++     G +VV+V+ G  HV  L   
Sbjct: 327 VGLTTSGQVWGMGNTVYGQLGNPRSDGKL-PCLVEDI--MGENVVQVACGSYHVAVLTVK 383

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
             V+TWGKG  G LGHGD  D+ +P  +  L+     H+A  G +  A +C
Sbjct: 384 SEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIAC-GANFTAAIC 433



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 16/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH  +      P LVE+L       V  G
Sbjct: 94  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGH-GSREDYIHPSLVESLAVSNVDFVACG 152

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG  L    PK I+   E   V  ++ G  +  
Sbjct: 153 EFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTA 212

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 213 LITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESL--SGLKTIAVACGVWHTAAVVEVI 270

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SSG ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 271 VTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASL 311



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 7/196 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P  + 
Sbjct: 80  VLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVE 139

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +   +
Sbjct: 140 SL-AVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRI-SGALE 197

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV 378
           G  V  VS G  H   + S+G ++T+G G  G LGHG+      P   E LS LK+    
Sbjct: 198 GQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVA 257

Query: 379 QGLSVLAEVCPTIVQE 394
            G+   A V   IV +
Sbjct: 258 CGVWHTAAVVEVIVTQ 273



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 15/107 (14%)

Query: 288 GVVYSFG---------SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G VY +G         +GS+  +    +HD L P+ +++  +  + V  V  G +H   +
Sbjct: 50  GDVYVWGEVICENSVRAGSDAVIRSTVRHDVLLPKPLES--KLVLDVYHVDCGVKHAALV 107

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
             +G V+TWG+   G LGHG   D   P    SL   LAV  +  +A
Sbjct: 108 TKNGEVFTWGEESGGRLGHGSREDYIHP----SLVESLAVSNVDFVA 150



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++  V+  G+++ G LG+     +      +      +VVQV+    H A +    +V
Sbjct: 329 LTTSGQVWGMGNTVYGQLGNPRSDGKLPCL--VEDIMGENVVQVACGSYHVAVLTVKSEV 386

Query: 185 FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           FT G  ++   GH D  +R I  P LVE L+    + +  G NFT  +  R
Sbjct: 387 FTWGKGANGRLGHGDIEDRKI--PTLVEVLRDRGVRHIACGANFTAAICQR 435


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 5/239 (2%)

Query: 134 CGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
            G +  G LG G  T   +   +I       +  V+A   H A V + G++F  G     
Sbjct: 1   WGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             G  D N  +  P+ V ++ G     V  G   T  ++  G ++T G + +GQLGHGD 
Sbjct: 60  NLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
            DR  P  +  L    ++ QI+ G  + +A+T +G +Y +G      +G G+  D   P 
Sbjct: 119 EDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSP- 176

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            IQ    +   V+++S G  H +A+     V++WG+G  G LGHG+ +D+  P  L +L
Sbjct: 177 -IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 14/213 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 34  VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 92

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGF 230
              V   G ++T G +     GH D     F  RLV    EAL+G    Q++ G   T  
Sbjct: 93  TISVSSLGGLYTYGWSKYGQLGHGD-----FEDRLVPHRLEALRGDNISQISGGWRHTMA 147

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    
Sbjct: 148 LTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQN 205

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           V+S+G G+N  LGHGE  D   P  ++     G
Sbjct: 206 VFSWGRGTNGQLGHGESVDRNTPMILEALSVDG 238



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +G G   
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G LGHGD
Sbjct: 60  NLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 360 EIDKTLPEPLSSLK 373
             D+ +P  L +L+
Sbjct: 118 FEDRLVPHRLEALR 131


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 14/278 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           HS  +V  ++G + ++ G   T+ + N  +V+S G +  G LG G   T   S + +   
Sbjct: 26  HSQKVVAGTSGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQVK 82

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               +  +SA   H   +   G V+T G   S   G   TN     P  +  L G+    
Sbjct: 83  GLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA-- 139

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG N T  L   G + + G N +GQLG G+T +   P  +    ++G +  I++G  +
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGGH 196

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            L +  +G V+S+G  +   LG+G   +   P  I         ++ VSAG  H  AL S
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALKS 252

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G V+ WG  + G L +G++ID  +P   + L   +A+
Sbjct: 253 DGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIAI 290



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 20/272 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  H + L S+ +V++ G    G LG G   T  +  T         +  +SA
Sbjct: 86  GITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG---TNSLRTTPAPINGLTGITAISA 142

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNF 227
             NH   +   G +++ G N     G  +T   N P+  P  +          +++G   
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG------ITSISSGGGH 196

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +   G V + G N  GQLG+G   + PTP  I+ L     ++ ++AG  +  A+  +
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN---GIINVSAGVIHSTALKSD 253

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G      L +G + D   P  +Q     GI  + ++AG E   A+ S G  + W
Sbjct: 254 GTVWNWGCNFRGELANGNKIDSYIP--VQANGLNGI--IAITAGWEFSSAIKSDGTFWVW 309

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G    G LG+G + D T P  +SSL    A+ 
Sbjct: 310 GVNDYGQLGNGSKSDVTSPMQVSSLSGITAID 341



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 20/272 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+
Sbjct: 136 GITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISS 192

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H+  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  + 
Sbjct: 193 GGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHST 248

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 287
            L   G V   G N  G+L +G+ +D     S  P++  G   ++ I AG  +  A+  +
Sbjct: 249 ALKSDGTVWNWGCNFRGELANGNKID-----SYIPVQANGLNGIIAITAGWEFSSAIKSD 303

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G  + +G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +
Sbjct: 304 GTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAF 359

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G+   G LG+G     T PE +S   +++A  
Sbjct: 360 GENTYGQLGNGTTTGSTTPELVSIGDTYVATD 391


>gi|145527604|ref|XP_001449602.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417190|emb|CAK82205.1| unnamed protein product [Paramecium tetraurelia]
          Length = 399

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 115/219 (52%), Gaps = 18/219 (8%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + ++G ++T G +S  C  + D+     +PR ++A  G   ++V     FT  +T  G +
Sbjct: 18  LYKAGNLYTWGVHSLGCGINHDSQSDQLKPRRIDAFNG-NVQKVYPSEYFTAVITDNGDL 76

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +T G+N +GQLG G+T ++ TP+ +    + G  VV +A G ++ +A+  +G VY++GS 
Sbjct: 77  YTFGNNNYGQLGLGNTEEQQTPQLVKYFRDKGLKVVDVALGSNHGVALASDGNVYTWGSA 136

Query: 297 SN------FC----LGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSGYV 344
           +N       C    LG    ++ LQP+ ++      KG     VSAG  + + ++ +  V
Sbjct: 137 NNSFLDQLLCRPNGLGDNYTNNLLQPQVVEKLAGSAKGKF---VSAGINYSIVVNENNQV 193

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           Y WG G  G LG+G  ++   PE L+ +   LA  G ++
Sbjct: 194 YVWGAGKRGELGNGCSLNFKYPE-LNPIFEQLAKSGYTI 231



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 11/167 (6%)

Query: 235 GHVHTCGSNTHG-QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G+++T G ++ G  + H    D+  P+ I      G+V ++     +   +T NG +Y+F
Sbjct: 22  GNLYTWGVHSLGCGINHDSQSDQLKPRRIDAFN--GNVQKVYPSEYFTAVITDNGDLYTF 79

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--- 350
           G+ +   LG G   ++  P+ ++ FR KG+ VV V+ G  H VAL S G VYTWG     
Sbjct: 80  GNNNYGQLGLGNTEEQQTPQLVKYFRDKGLKVVDVALGSNHGVALASDGNVYTWGSANNS 139

Query: 351 -----YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
                 C   G GD     L +P    K   + +G  V A +  +IV
Sbjct: 140 FLDQLLCRPNGLGDNYTNNLLQPQVVEKLAGSAKGKFVSAGINYSIV 186



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 18/210 (8%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQ 220
            +V +V  SE   A +  +G ++T G+N+    G  +T      P+LV+    KG+    
Sbjct: 55  GNVQKVYPSEYFTAVITDNGDLYTFGNNNYGQLGLGNTEEQQ-TPQLVKYFRDKGLKVVD 113

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQL--------GHGD--TLDRPTPKSIAPLEEVGS 270
           V  G N    L   G+V+T GS  +  L        G GD  T +   P+ +  L     
Sbjct: 114 VALGSNHGVALASDGNVYTWGSANNSFLDQLLCRPNGLGDNYTNNLLQPQVVEKLAGSAK 173

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG----EQHDELQPRAIQTFRRKGIHVV 326
              ++AG +Y + V  N  VY +G+G    LG+G     ++ EL P   +   + G  + 
Sbjct: 174 GKFVSAGINYSIVVNENNQVYVWGAGKRGELGNGCSLNFKYPELNP-IFEQLAKSGYTIQ 232

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           ++ +     +AL + G V  WG+ Y G+LG
Sbjct: 233 KIKSCFAGTLALLNEGIVVGWGRSYYGSLG 262


>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 419

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 26/285 (9%)

Query: 130 SVFSCGSSLCGVLGHGPE-TTQCVSFTRINF------PSAAHVVQVSASENHAAFVLQSG 182
           +  S G+   G LGHG   T   VSF   N+           V Q +A   H+ F+   G
Sbjct: 26  TALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSIFLAHGG 85

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            VF CG N+    GH   +  +    LV+    V   +V AG N T  + + G V   G 
Sbjct: 86  FVFACGLNNYGQLGHGKHSAHVPEAALVDL--DVEVVRVAAGNNHTLCVDVDGGVWAFGK 143

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           N  GQLG G  LD   P+ I  L   G +V +A+G  + LA++ +  VYS+G+ ++  LG
Sbjct: 144 NEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADGVLG 203

Query: 303 HG-EQHDE----------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           HG E  +E           +PR ++        V  ++AG  H   +D  G ++TWG+G 
Sbjct: 204 HGSETWNEGWFYRTAKTVAKPRLLRALSE--TKVRSIAAGHMHSACVDERGELFTWGQGR 261

Query: 352 CGALGHGDE-ID-KTLPEPLSSLK--SHLAVQGLSVLAEVCPTIV 392
              LG   + +D +T P+ + +L+    +   GL  LA     +V
Sbjct: 262 FNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAGVV 306



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 131/289 (45%), Gaps = 33/289 (11%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H++ +++   VF+CG +  G LGHG  +        ++      VV+V+A  N
Sbjct: 70  QCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDLD--VEVVRVAAGNN 127

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 231
           H   V   G V+  G N     G    +   F+PR +E  AL+G     V +G   +  L
Sbjct: 128 HTLCVDVDGGVWAFGKNEGGQLG-TGLDLDGFQPRRIETLALEG-KIVDVASGAEHSLAL 185

Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDR----------PTPKSIAPLEEVGSVVQIAAGPSY 280
           +    V++ G++  G LGHG +T +             P+ +  L E   V  IAAG  +
Sbjct: 186 SEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSET-KVRSIAAGHMH 244

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              V   G ++++G G    LG   ++   E  P+++ T R     V +V+ G  H +A 
Sbjct: 245 SACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLR----FVHQVTCGGLHTLAS 300

Query: 339 DSSGYVYTWGKGYCGALGHGDEID--KTLPEPLSSLKSHLAVQGLSVLA 385
            S+G V +WG    G LGHG   D    +P+P+      L+ +G S L+
Sbjct: 301 TSAG-VVSWGANQHGELGHGSNSDAKSAIPKPIK-----LSSRGWSKLS 343



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 25/263 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL +  +  V++ G +  G LG G +                 +V V++  
Sbjct: 120 VRVAAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGA 179

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD----------TNRPIFRPRLVEALKGVPCKQVT 222
            H+  + +  +V++ G ++    GH            T + + +PRL+ AL     + + 
Sbjct: 180 EHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIA 239

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPT-PKSIAPLEEVGSVVQIAAGPSY 280
           AG   +  +  RG + T G     QLG     +D  T PKS+  L     V Q+  G  +
Sbjct: 240 AGHMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLR---FVHQVTCGGLH 296

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            LA T  GVV S+G+  +  LGHG   D     P+ I+   R      ++SAG +H   +
Sbjct: 297 TLASTSAGVV-SWGANQHGELGHGSNSDAKSAIPKPIKLSSRG---WSKLSAGWKHSAGV 352

Query: 339 DSSGYVYTWGKGYCGALG-HGDE 360
            + G ++ W  G+ G++G H DE
Sbjct: 353 SNDGKLFAW--GFGGSVGSHSDE 373



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 114/253 (45%), Gaps = 39/253 (15%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR----------INFPSA 162
           + + +G  H+L +S ++ V+S G+S  GVLGHG ET     F R          +   S 
Sbjct: 173 VDVASGAEHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSE 232

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI---FRPRLVEALKGVPCK 219
             V  ++A   H+A V + G++FT G       G   T++ +     P+ V+ L+ V   
Sbjct: 233 TKVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQ--TSKYVDHETAPKSVDTLRFV--H 288

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAG 277
           QVT G   T   T  G V + G+N HG+LGHG   D  +  PK I  L   G   +++AG
Sbjct: 289 QVTCGGLHTLASTSAG-VVSWGANQHGELGHGSNSDAKSAIPKPI-KLSSRG-WSKLSAG 345

Query: 278 PSYMLAVTGNGVVYSFGSG------------SNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             +   V+ +G ++++G G            S   LG G   D  +P  +          
Sbjct: 346 WKHSAGVSNDGKLFAWGFGGSVGSHSDEKLSSGGQLGLGNDFDYWEPTEVWLPG----DA 401

Query: 326 VRVSAGDEHVVAL 338
           V VS G  H +AL
Sbjct: 402 VGVSCGFNHTLAL 414



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSS--DIV 107
           P+  R+L +     + A H   A +    + EL     G + ++ +  + V+H +    V
Sbjct: 224 PRLLRALSETKVRSIAAGHMHSACVDE--RGELFTWGQGRFNQLGQTSKYVDHETAPKSV 281

Query: 108 ETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +T     Q+T G  HTL  +++ V S G++  G LGHG  +    +  +    S+    +
Sbjct: 282 DTLRFVHQVTCGGLHTLASTSAGVVSWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWSK 341

Query: 168 VSASENHAAFVLQSGQVFTCG 188
           +SA   H+A V   G++F  G
Sbjct: 342 LSAGWKHSAGVSNDGKLFAWG 362


>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 230

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 9/223 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S  HV+ +SA  +H   +L    V + G       GH DT+  +  P  + A  G     
Sbjct: 10  SPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVS 68

Query: 221 VTAGLNFTGFLTIRGH-VHTCG---SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           VT G ++T   +  G  V++ G    N +G+LG G T D   P+ I   E +  +  +AA
Sbjct: 69  VTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAA 127

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + +A+T +G +Y +G G    LG G+ +D L P  +      G  +V VS G  H +
Sbjct: 128 GAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTI 184

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           ++ SSG +YT G    G LGHGD  D  +P  + +L   L  Q
Sbjct: 185 SISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQ 227



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  HT+ L++ + V S G    G LGHG +T   +  T+++      +V V+   
Sbjct: 15  LLISAGASHTVALLTGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGA 73

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN--------RPIFRPRLVEALKGVPCKQVTAG 224
           ++     +SG+     D  S+ C  R+ N        +    P+ + A +G+  K V AG
Sbjct: 74  DYTVARSKSGK-----DVYSWGCWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAG 128

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +T  G ++  G   +G LG GDT DR  P+ +    +   +V ++ G  + +++
Sbjct: 129 AEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISI 186

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           + +G +Y+ G      LGHG+  D L PR +Q    K I  V
Sbjct: 187 SSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 228


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 39/298 (13%)

Query: 116 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPE----TTQCVSFTRINFPSAAHVVQVS 169
           ++ G  H+   SN S  V+  G  L G LG+  E      Q +   +I       V+Q+S
Sbjct: 165 LSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQIS 224

Query: 170 ASENHAAFVLQ----------SGQVFTCGDNSSFCCGHRD----TNRPIFRPRLVEA--- 212
             ENH   ++Q            ++F  G+N     G  +     N  +   R +     
Sbjct: 225 CGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQ 284

Query: 213 LKGVPCKQVTAGLN-------------FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           L   P +  T   N             ++  LT  G+V+T GS   G+LG+ D   +P P
Sbjct: 285 LDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQP 344

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           K +  L     V +I+ G  +  A+T  G V+S+G G N  LGHG   +E Q R +   +
Sbjct: 345 KVLKELTGF-QVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQ 403

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              IH++ +S G+ H +AL + G VY+WG G  G LGHGD + ++LP  +++L+ ++A
Sbjct: 404 N--IHIIDISCGESHTLALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIA 459



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 5/195 (2%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           +  ++ V AS  ++A +  +G V+T G       G+ D  +   +P++++ L G    ++
Sbjct: 300 SNQLIGVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQP-QPKVLKELTGFQVTRI 358

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G      +T +G V + G   +GQLGHG  L+    + ++ L+ +  ++ I+ G S+ 
Sbjct: 359 SLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNI-HIIDISCGESHT 417

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+T  G VYS+G G    LGHG+   +  P  +        ++ ++SAG  H  AL   
Sbjct: 418 LALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLED---NIAQISAGKRHSSALTDD 474

Query: 342 GYVYTWGKGYCGALG 356
           G ++TWG    G LG
Sbjct: 475 GKLFTWGSNEYGQLG 489



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 16/188 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           Y   L SN +V++ GS   G LG+      P+       T         V ++S    H 
Sbjct: 312 YSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELT------GFQVTRISLGYYHG 365

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A + + GQVF+ G   +   GH    N    RP  V AL+ +    ++ G + T  LT +
Sbjct: 366 AAITEQGQVFSWGRGINGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHTLALTNK 423

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V++ G    GQLGHGD L +  P  +A LE+  ++ QI+AG  +  A+T +G ++++G
Sbjct: 424 GEVYSWGGGQLGQLGHGDFLRQSLPIKVANLED--NIAQISAGKRHSSALTDDGKLFTWG 481

Query: 295 SGSNFCLG 302
           S     LG
Sbjct: 482 SNEYGQLG 489



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 46/242 (19%)

Query: 188 GDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGS 242
           G+NSS     R+  R + R   P  V AL+     QV  G + T  +T     HV + GS
Sbjct: 66  GNNSS---QQRNQQRGMIRDPRPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGS 122

Query: 243 NTHGQLGHG--------------DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-N 287
           N + +LGH                 + +PT   I    E   +  ++ G S+  A +  +
Sbjct: 123 NQNAKLGHSYYKPSPNNVSSSSIQIVKQPT---IVKALENQKIDGLSCGTSHSFAWSNES 179

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR---RKGIHVVRVSAGDEHVVAL------ 338
           G+VY +G G N  LG+  +    +P+ ++  +      + V+++S G+ H +AL      
Sbjct: 180 GLVYGWGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQ 239

Query: 339 ----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQE 394
                S   ++ WG      LG  ++ D    E + S +       +SV  ++ P   Q 
Sbjct: 240 NEGETSQNKLFVWGNNDKLQLGMDNQADGN-NEDMQSARE------ISVPHQLDPDPFQH 292

Query: 395 DT 396
           DT
Sbjct: 293 DT 294



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 45/234 (19%)

Query: 184 VFTCGDNSSFCCGHRDTN-----------RPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           VF+ G N +   GH               + + +P +V+AL+      ++ G + +  + 
Sbjct: 117 VFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVKALENQKIDGLSCGTSHSFAWS 176

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----PLEEVGSVVQIAAGPSYMLAV--- 284
              G V+  G   +G+LG+ +      P+ +      +E    V+QI+ G ++ LA+   
Sbjct: 177 NESGLVYGWGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQM 236

Query: 285 -------TGNGVVYSFGSGSNFCLGHGEQHD----------------ELQPRAIQ---TF 318
                  T    ++ +G+     LG   Q D                +L P   Q     
Sbjct: 237 PPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDN 296

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +     ++ V A   +  AL S+G VYTWG G  G LG+ D   +  P+ L  L
Sbjct: 297 KNYSNQLIGVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKEL 350


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 14/268 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H++ L S+ +V + G ++ G LG G  T + +    +      +V  ++   
Sbjct: 61  LQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIP---VQVKDLNNVTAIAGGA 117

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+T G N +   G   T +   +P  V  LK +         N    L 
Sbjct: 118 WHSVALTSDGTVWTWGSNWAGQLGD-GTTKSRNKPVQVNNLKNITAIASKGLHNLA--LK 174

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +GQLG G T DR TP     L    +++ IA G  + LA   +G +++
Sbjct: 175 SDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN---TIISIAGGGYHSLAQKADGTIWT 231

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      LG G   +   P  +   +     V  +  G +H + L ++G ++ WG    
Sbjct: 232 WGLNQYGQLGDGTITNRTIPVLVNGIK----DVSMIRCGGDHSIVLKNNGTIWIWGFNQH 287

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           G LG     +++ P P+  LK+ + + G
Sbjct: 288 GQLGDRSTDNRSTPVPMGDLKNIMTIDG 315



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 15/249 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G ++  L S+ +V++ G ++ G LG G  T +    T +   S   ++ ++    H+   
Sbjct: 167 GLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRN---TPVQTRSLNTIISIAGGGYHSLAQ 223

Query: 179 LQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
              G ++T G N     G    TNR I  P LV  +K V    +  G + +  L   G +
Sbjct: 224 KADGTIWTWGLNQYGQLGDGTITNRTI--PVLVNGIKDVSM--IRCGGDHSIVLKNNGTI 279

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G N HGQLG   T +R TP    P+ ++ +++ I  G  + L +  +G V+++G+  
Sbjct: 280 WIWGFNQHGQLGDRSTDNRSTP---VPMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNE 336

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           N  LG G       P    T      +V  +++G++H +AL S G ++ WG    G LG 
Sbjct: 337 NGQLGDGTTMSRATPIQASTLS----NVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGD 392

Query: 358 GDEIDKTLP 366
           G   +++ P
Sbjct: 393 GSISNRSTP 401



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQ 220
           A+ ++QVS    H+  +   G V T G N     G   +T+R I  P  V+ L  V    
Sbjct: 57  ASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKI--PVQVKDLNNVTA-- 112

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G   +  LT  G V T GSN  GQLG G T  R  P  +  L+   ++  IA+   +
Sbjct: 113 IAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLK---NITAIASKGLH 169

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            LA+  +G V+++G      LG G   D    +Q R++ T       ++ ++ G  H +A
Sbjct: 170 NLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNT-------IISIAGGGYHSLA 222

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             + G ++TWG    G LG G   ++T+P  ++ +K
Sbjct: 223 QKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIK 258



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 6/118 (5%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +++Q++ G  + +A+  +G V ++G   +  LG G   D   P  ++       +V  ++
Sbjct: 59  TILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN----NVTAIA 114

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK--SHLAVQGLSVLA 385
            G  H VAL S G V+TWG  + G LG G    +  P  +++LK  + +A +GL  LA
Sbjct: 115 GGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAIASKGLHNLA 172


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 136/325 (41%), Gaps = 56/325 (17%)

Query: 115 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           ++  G YHTL++        + + G +   VLG G ET + V    + F S   V +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEVSC 109

Query: 171 SENHAAFVLQ-----SGQVFTCGDNSSFCCGH-------------------RDTNRPIFR 206
             N++A +++      G+V+T G  +    G+                   ++     F 
Sbjct: 110 GTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFT 169

Query: 207 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  +P  +  
Sbjct: 170 PKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLL 229

Query: 265 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             E GS                  V   AAG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              L P  +     +   VV VSAGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDR--DVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 367 EPLSSLKSHLAVQGLSVLAEVCPTI 391
             +          G+ VL   C T 
Sbjct: 348 RKVEGFG------GVPVLQVACGTF 366



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 27/292 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 164
           +I+ G  HTL +S+  ++++ G    G LG G +T+   S  R+   S            
Sbjct: 185 RISCGADHTLALSDGGALYAWGVGSYGNLGQG-DTSDAYSPVRVLLGSEKGSGKKKENLG 243

Query: 165 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 212
                     V   +A   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 IGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +       V+AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+A G  + LA+T  G V+++G+G    LG GE          +      + V+ V+AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGP 419

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVL 384
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V  L  +
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSM 471



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 30/252 (11%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-AAHVVQVSASENHAA 176
           G  HT+ ++ + +V+  GS+  G LG G E  +   +  +     +  + +++    H  
Sbjct: 509 GENHTVALTGTGAVWVWGSNDEGQLGLG-EQVEEDQYEPVKLDCFSTPIRRIACGSKHCL 567

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG- 235
            V Q G VF  G N     G     RP F P  V AL+      V  G +++  +T  G 
Sbjct: 568 AVAQYGDVFAWGANDDGQLG-LGVLRPSFEPAAVTALR--QAIDVFCGDDYSACITSNGG 624

Query: 236 ---------------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---G 277
                           + T G+   G+LG G+ +      SI   ++V   V + A   G
Sbjct: 625 AQTVSLALESGTEFGDLWTWGAAESGKLGLGEDV---ASGSILTPQKVPFSVPVCACSLG 681

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ LA+T  G  Y++G+G    LG G   +   P        KG+ +  V+AG  H +A
Sbjct: 682 TSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDF--PKGVRIRSVAAGASHSLA 739

Query: 338 LDSSGYVYTWGK 349
           L   G ++ WGK
Sbjct: 740 LSMDGDLWIWGK 751



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 154 FTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLV 210
           F ++  PS    V+ ++A+E+H+  V ++G+VF  GDN  +   CG R   R + RP ++
Sbjct: 767 FMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQAER-LDRPEMI 825

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L  V C+ V  G   + F+   G V+  G    G+LG G +  +      A L     
Sbjct: 826 AGLPNV-CQWVATGPQASFFVLCSGEVYAAGVINGGRLGTGWSKRKYQFAPAAVLTHWAD 884

Query: 271 VVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
              IA   G        GNG +      +   L    Q  EL  + IQTF
Sbjct: 885 FGDIAFQNGDEGFSLGFGNGELLPASGAAGDELAKSNQ--ELSEKTIQTF 932



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 80/215 (37%), Gaps = 28/215 (13%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           ENH   +  +G V+  G N     G         + P  ++     P +++  G      
Sbjct: 510 ENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFS-TPIRRIACGSKHCLA 568

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-- 288
           +   G V   G+N  GQLG G       P ++  L +    + +  G  Y   +T NG  
Sbjct: 569 VAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQA---IDVFCGDDYSACITSNGGA 625

Query: 289 --------------VVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAG 331
                          ++++G+  +  LG GE       L P+ +       + V   S G
Sbjct: 626 QTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPF----SVPVCACSLG 681

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             H +A+ + G  Y WG GY G LG G   +   P
Sbjct: 682 TSHALAITARGECYAWGAGYYGRLGIGTTANAYAP 716


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 10/272 (3%)

Query: 102 HSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
             +D  +      +++ G  H+L L+ + ++ SCG +  G LG     ++    + +   
Sbjct: 25  KENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRIEQISSL--- 81

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            A  +V VS   NH+  +   G +++ GD S    G    +   F P+ +  L      Q
Sbjct: 82  EAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQ 141

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++ G   +  L   G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S
Sbjct: 142 ISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGS 200

Query: 280 YMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              A++ +G V+++G  +   LG  +  +    +P A+ + R  G  V  +S G+EH   
Sbjct: 201 QTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG--VAYISCGEEHTAV 258

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L+  G VYT+G    G LG       ++P+ +
Sbjct: 259 LNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKI 290



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 14/265 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H++ + +  +++S G    G LG G  +++  +  RI       ++Q+S   
Sbjct: 87  VDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 229
            H+  + + G+VF+ G N    CG       I     P+LV++LKG+P  QVTAG + T 
Sbjct: 147 FHSVALAEDGRVFSWGQNK---CGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTF 203

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L++ G V   G N  GQLG  +   + T  P ++  L ++G V  I+ G  +   +  +
Sbjct: 204 ALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG-VAYISCGEEHTAVLNKD 262

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYT 346
           G+VY+FG  +   LG    +    P+ I+ + R+   V +V+ G  H ++ + +   + +
Sbjct: 263 GIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQ---VSQVACGRYHTLLYVFTCNRIVS 319

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS 371
           +GKG     G+ +  D+     L S
Sbjct: 320 FGKGSQRQQGNDESSDQAEASQLPS 344


>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1073

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 8/244 (3%)

Query: 115 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASE 172
           Q + G+  +L + +  V +S G++  G LG  P  +       R++ P+  H +Q+SA +
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPC-KQVTAGLNFTGF 230
           ++A  +  +  +++ G+N     G   ++ P   P +++ ++       QV+ G N+   
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 231 LTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTG 286
           +   G V++ G N+ GQLG   G T+    P +  P  L +   + Q+ AG    LA+  
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKASLALAS 255

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G VYS+G  S+  LG      E   RA +     G++  ++SAG  H++A+DS G  Y+
Sbjct: 256 DGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDSDGNTYS 315

Query: 347 WGKG 350
           WG G
Sbjct: 316 WGYG 319



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 10/199 (5%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGL 225
           Q SA ++ +  +   G +++ G+NS    G   T+  P  RP  V+   G    Q++AG 
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           ++   + I  H+++ G+N  GQ G G   +   P  + I  +    S VQ++ GP+Y+LA
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 284 VTGNGVVYSFGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           V  +G VYS+G  S+  LG         +    P  +     KG+ + +V+AG +  +AL
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSL--PKGVKITQVTAGGKASLAL 253

Query: 339 DSSGYVYTWGKGYCGALGH 357
            S G VY+WG    G LG 
Sbjct: 254 ASDGSVYSWGDNSSGQLGR 272



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 50/294 (17%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVS 169
           +QI+ G  + + I  N  ++S G++  G  G G  ++  +   ++  PS       VQVS
Sbjct: 129 LQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQV-IPSVNATQSFVQVS 187

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLVEALKGVPCKQVTAGL 225
              N+   V   G V++ GDNSS   G       T+     P  V   KGV   QVTAG 
Sbjct: 188 TGPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGG 247

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 284
             +  L   G V++ G N+ GQLG   +   P  ++       G +  QI+AG  ++LAV
Sbjct: 248 KASLALASDGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAV 307

Query: 285 TGNGVVYSFGSG-----SNFCLGHGEQ-------HD------------------------ 308
             +G  YS+G G     S   L  G +       HD                        
Sbjct: 308 DSDGNTYSWGYGGTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIYSWGDNSSGQLGQ 367

Query: 309 ----ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
               E   +  +     G+   +  AG  H++A+ S GY+Y WG      LG G
Sbjct: 368 DTGGETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWGDNSSSQLGTG 421



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 20/235 (8%)

Query: 144 HGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVL---QSGQVFTCGDNSSFCCGHRD 199
            GP+T  Q V  T    P     ++ S  ++ A F L     G +++ G N  +  GH  
Sbjct: 583 EGPQTGGQSVKLTP---PQGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGHTT 639

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---GDTLDR 256
           +++P+    +VE   GV   Q  AG  F   L   G+V+T G+NT+ QLG    G+  + 
Sbjct: 640 SDKPV----VVETPAGVRYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHN- 694

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P  + P   +    ++ AG  + LA+  +G +Y++G  S   LG G      +   ++
Sbjct: 695 -APDKVTPPAGI-HYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQGRIGATSR-NPLR 751

Query: 317 TFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
               +GI   +V  G   +HV+AL S G +Y+WG      LG        L +PL
Sbjct: 752 VVAPEGITFTQVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNALTALGDPL 806



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 14/247 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV--SASENHAAFVLQSG 182
           L S+ ++++ G +  G LG G       +  R+  P      QV    S  H   +   G
Sbjct: 720 LGSDGNLYAWGDNSAGALGQGRIGATSRNPLRVVAPEGITFTQVFTGPSSKHVLALGSDG 779

Query: 183 QVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +++ G + SF  G +         P+  P  V+A  G+   Q + GLNF+  L    ++
Sbjct: 780 NLYSWGYDDSFQLGRQRNALTALGDPL--PGKVQAPAGITFTQASTGLNFSLALGSDNNL 837

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           ++ G+    QLG+   +       I P     +  +  AG  + +A   +G +YS+G   
Sbjct: 838 YSWGNGLKSQLGNAQMISMYPSNVIMPSGI--NFTRFVAGRYFAIAAGSDGNLYSWGYND 895

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              LG       +  P  ++     GI +++  AGD H  A+ S G  Y+WGK   G LG
Sbjct: 896 YGQLGRDISDKSDYMPTKLEA--PAGITLIQPQAGDNHSSAIGSDGNTYSWGKSADGVLG 953

Query: 357 HGDEIDK 363
                D+
Sbjct: 954 RDTSGDQ 960



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 25/178 (14%)

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           A+  +   Q +AG +F+  L   G +++ G+N+ GQLG        TP    P +  G V
Sbjct: 68  AIGDIRFSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGR-------TPTDSDPADRPGRV 120

Query: 272 --------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKG 322
                   +QI+AG  Y +A+  N  +YS+G+      G G      L P  +       
Sbjct: 121 DVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNAT 180

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-------PEPLSSLK 373
              V+VS G  +V+A+ S G VY+WG    G LG   E+  T+       P P+S  K
Sbjct: 181 QSFVQVSTGPNYVLAVCSDGTVYSWGDNSSGQLGR--EVGGTMTHYGPGNPNPVSLPK 236



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G+T    TP +I  +       Q +AG  + LA+   GV+YS+G+ S   LG      + 
Sbjct: 58  GNTTATLTPPAIGDIR----FSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDP 113

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             R  +     G H +++SAGD++ VA+D + ++Y+WG    G  G G     +LP
Sbjct: 114 ADRPGRVDVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLP 169


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 116/268 (43%), Gaps = 16/268 (5%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFV 178
           R+  ++     VF+ G    G LGHG          RI+ P     V  V+    H A V
Sbjct: 288 RHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALV 347

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT------ 232
              GQ+FT GD +    GH +     + PR VE+L G+    V  G+  T  +       
Sbjct: 348 TSMGQLFTFGDGTFGVLGHGNRENVAY-PREVESLAGLRTIAVACGVWHTAAVVEVIVTQ 406

Query: 233 -----IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
                  G + T G     +LGHGD   R  P  +  L +  +  +IA G S  + +T  
Sbjct: 407 SSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDY-NFHKIACGHSLTVGLTTA 465

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V++ GS     LG+    D   P  ++  +  G  V  ++ G  HV AL S   VYTW
Sbjct: 466 GHVFTMGSTVYGQLGN-PCADGKVPCLVED-KLYGESVEEIACGAYHVAALTSRNEVYTW 523

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           GKG  G LGHGD  D+  P  + +LK  
Sbjct: 524 GKGANGRLGHGDGEDRKTPTIVEALKDR 551



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+ S   +F+ G    GVLGHG    + V++ R +   +    + V+    
Sbjct: 337 VTCGPWHTALVTSMGQLFTFGDGTFGVLGHG--NRENVAYPREVESLAGLRTIAVACGVW 394

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P   P  V AL      ++ 
Sbjct: 395 HTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGD-KEPRLEPTCVPALIDYNFHKIA 453

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV T GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 454 CGHSLTVGLTTAGHVFTMGSTVYGQLGN-PCADGKVPCLVEDKLYGESVEEIACGAYHVA 512

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 513 ALTSRNEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDR--HVKYIACGANYSAAI 566



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 16/180 (8%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RP 257
           T   +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   D  +P
Sbjct: 262 TRADVLLPRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQP 321

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             +   PLE +  V  +  GP +   VT  G +++FG G+   LGHG + +   PR +++
Sbjct: 322 CLRISGPLEGL-QVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVES 380

Query: 318 FRRKGIHVVRVSAGDEHVVAL-----------DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
               G+  + V+ G  H  A+            SSG ++TWG G    LGHGD+  +  P
Sbjct: 381 L--AGLRTIAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEP 438


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           + ++  VF  G +    LG G   +  V   +++F S   VV +S  S  H     + G+
Sbjct: 37  ITNDDEVFVFGLNCSNCLGTGDSLSTIVP-KKLDFLSGRKVVSLSYGSGPHILLATEDGE 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  G V+  G 
Sbjct: 96  LFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGY 154

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG
Sbjct: 155 NNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLG 214

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            G   +++ P   +    +G+ V ++ +G  H +AL   G +Y WG    G LG G++ +
Sbjct: 215 LGNNGNQVTP--CRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSN 272

Query: 363 KTLPEPLSSLKSHL 376
           +  P  + + K  +
Sbjct: 273 QLSPVQILTEKERI 286



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 4/211 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A ++    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIV-PKKLDFLSGRKVVSLSYGSGPHI 87

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L T  G +   G N + QLG+G T     P  ++       V ++A G  + +A+T  G
Sbjct: 88  LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVSIVCGQTSSLAVVDNGEVYGWG 206

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
               G LG G+  ++  P  L  L+  L VQ
Sbjct: 207 YNGNGQLGLGNNGNQVTPCRLVGLQG-LCVQ 236


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 123/271 (45%), Gaps = 35/271 (12%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y  +      + S G++  GVLGH     Q      I   S+  V  V+A E H+  + +
Sbjct: 559 YKNIKEQTGLILSWGANSDGVLGHTGGIEQLWPLA-IESLSSVQVKMVAAGEFHSLCLTE 617

Query: 181 SGQVFTCGDNSSFCCGHRDTN-------RPIFRPR---LVEALKGVPCKQVTAGLNFTGF 230
           +G+V + G N    CG   T          + RPR   L + L+      + AG   +  
Sbjct: 618 NGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSAL 677

Query: 231 LTIRGHVHTCGSNTHGQLGH---------GDTLD-----------RPTPKSIAPLEEVGS 270
           +T  G ++T G     QLGH         G+ L            +P P  ++ L   G 
Sbjct: 678 VTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALN--GQ 735

Query: 271 VV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           VV Q+A G  +   VT  G +Y++G G+N  LGHG+  D+  P+ ++   +  I +V+V+
Sbjct: 736 VVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKI-MVKVA 794

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            G+ H  A+DS+G +YT G    G LG GDE
Sbjct: 795 CGENHSAAVDSAGVIYTTGGDESGQLGKGDE 825



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 129/309 (41%), Gaps = 48/309 (15%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHG----PETTQCVSFTR---INFPS---AAH 164
           +  G +H+L L  N  V S G +  G  G       E++   +  R   I  P       
Sbjct: 605 VAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKT 664

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-----------------RDTNRPIFRP 207
           VV ++A   H+A V   G+++T G    F  GH                        F+P
Sbjct: 665 VVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQP 724

Query: 208 R--LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +   + AL G   KQV  G   +  +T  G ++T G   +GQLGHGD  D+ TPK +   
Sbjct: 725 KPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAG 784

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYS--------FGSGSNF--------CLGHGEQHDE 309
            +   +V++A G ++  AV   GV+Y+         G G  +        C G G    E
Sbjct: 785 IKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQE 844

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             P  +     + +  V ++ G     A+ + G +YTWGKG   ALG G   D + P  L
Sbjct: 845 RIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSEPTHL 902

Query: 370 SSLKSHLAV 378
           SS+   ++V
Sbjct: 903 SSIDGVVSV 911



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 113/281 (40%), Gaps = 45/281 (16%)

Query: 116 ITTGRYHTLLIS---------NSSVFSCGSSLCGVLGHG-------PETTQCVSF----T 155
           I  G YH+ L++             F  G      LG G         + Q   F    T
Sbjct: 668 IAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPT 727

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R++  +   V QV+    H+A V + G ++T G  ++   GH D        R+   +K 
Sbjct: 728 RLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKD 787

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-----------------DR-P 257
               +V  G N +  +   G ++T G +  GQLG GD                   +R P
Sbjct: 788 KIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIP 847

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           T  SI  +  V   V IA G  +  A+T  G++Y++G G+   LG G   D  +P  + +
Sbjct: 848 TFLSILSVRHV-QFVDIACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSEPTHLSS 904

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
                  VV V+ GD H  AL   G +Y WG    G LG G
Sbjct: 905 ID----GVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDG 941


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 12/226 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
           V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 480 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 538

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 539 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 597

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 598 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 655

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
                  P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG
Sbjct: 656 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 427 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 485

Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 486 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 545

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 546 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 603

Query: 361 IDKTLPEPLSSLKSHLAVQ 379
             +  P+ +  L  H  +Q
Sbjct: 604 TTQLKPKMVKVLLGHRVIQ 622



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 457 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 514

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 515 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 573

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 574 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 631

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +AL   G V++WG G  G LG G      +P+ +  L      Q
Sbjct: 632 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 676



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 523 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 581

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 582 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 640

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 641 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 699


>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
 gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
           Y-400-fl]
          Length = 790

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 116/261 (44%), Gaps = 12/261 (4%)

Query: 116 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I TGRYHT  ++      C G +  G LG G    +      +   S   V  ++A  +H
Sbjct: 72  IATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDVVGLESG--VAAIAAGGSH 129

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G V   G N S   G+ +T  P   P  +VE  +GV    +TAG   T  LT 
Sbjct: 130 TCALTTNGGVKCWGANVSGQLGN-ETQIPYSAPVDVVELGRGV--FDITAGWEHTCALTT 186

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG G T DR TP  +A LE    V  IAAG  +  A+T +G V  +
Sbjct: 187 GGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLES--GVAAIAAGEGHTCALTTSGGVKCW 244

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G  +  + P  +         V  ++ G EH  AL + G V  WG    G
Sbjct: 245 GDNLEGQLGGGTIYSHITPVDVAGLESD---VAAIAVGWEHTCALTTVGGVRCWGNNSSG 301

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LG G   ++ +P  +  L+S
Sbjct: 302 QLGDGTMTERNVPVGVIGLES 322



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 111/273 (40%), Gaps = 10/273 (3%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D+VE   G   IT G  HT  ++      C G +  G LG G    +          S  
Sbjct: 163 DVVELGRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESG- 221

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  ++A E H   +  SG V   GDN     G       I  P  V  L+      +  
Sbjct: 222 -VAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIYSHI-TPVDVAGLE-SDVAAIAV 278

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G+N+ GQLG G   +R  P  +  LE    V  I AG  +  A
Sbjct: 279 GWEHTCALTTVGGVRCWGNNSSGQLGDGTMTERNVPVGVIGLES--GVTAITAGGGHTCA 336

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G V  +G+     LG+   H   QP         GI VV ++AG  H  AL +SG 
Sbjct: 337 LTTGGGVKCWGNNFYGQLGNVTAH---QPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGG 393

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           V  WG  Y   LG G    ++ P  +S L+S +
Sbjct: 394 VKCWGYNYDVQLGDGTTTARSTPVDVSGLESDV 426



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 118/264 (44%), Gaps = 11/264 (4%)

Query: 105 DIVETSAGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D++  +     I  G +HT  L+++  V   G++  G LG G  + + +        S  
Sbjct: 520 DVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSDRSIPVDVSGLGSG- 578

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  ++A   H   +  SG V   G NSS+  G+    +P     +     GV    +TA
Sbjct: 579 -VAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQPYIPVDVFGLWSGV--TAITA 635

Query: 224 GLNFTGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           GL+ T  LT     V   G N  GQLG G T  R  P+++  LE  GS   IAAG ++  
Sbjct: 636 GLHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLRRFPQTVIGLE--GSETAIAAGGAHTC 693

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G +  +G      LG G  HD   P  +   R +  +V  ++AG  H  AL +  
Sbjct: 694 ALTVSGGMKCWGDNFYGQLGDGSMHDRSTP--VDVIRLES-NVDAIAAGFFHTCALTTDK 750

Query: 343 YVYTWGKGYCGALGHGDEIDKTLP 366
            V  WG  +   LG G  + +++P
Sbjct: 751 GVKCWGDNFYAQLGDGRPLWRSVP 774



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V   G N+ GQLG G   DR TP  +  LE    V  IAAG S+  A+T NG V
Sbjct: 82  LTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDVVGLES--GVAAIAAGGSHTCALTTNGGV 139

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
             +G+  +  LG+  Q     P  +    R    V  ++AG EH  AL + G V  WG  
Sbjct: 140 KCWGANVSGQLGNETQIPYSAPVDVVELGRG---VFDITAGWEHTCALTTGGGVKCWGDN 196

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   D+  P  ++ L+S +A
Sbjct: 197 SSGQLGDGTTNDRNTPVDVAGLESGVA 223



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 110/273 (40%), Gaps = 10/273 (3%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D+    +G   I  G  HT  ++ S    C G +L G LG G   +           S  
Sbjct: 214 DVAGLESGVAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLES-- 271

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  ++    H   +   G V   G+NSS   G            ++    GV    +TA
Sbjct: 272 DVAAIAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTMTERNVPVGVIGLESGV--TAITA 329

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G+N +GQLG+        P  +A L     VV IAAG ++  A
Sbjct: 330 GGGHTCALTTGGGVKCWGNNFYGQLGNVTAHQPGIPVDVAGLGI--GVVAIAAGGAHTCA 387

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G V  +G   +  LG G       P  +         VV ++AG  H  AL +SG 
Sbjct: 388 LTTSGGVKCWGYNYDVQLGDGTTTARSTPVDVSGLESD---VVTITAGGAHTCALTTSGG 444

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           V  WG+ +   LG G  ID+  P  +  L S +
Sbjct: 445 VKCWGRNFNFQLGDGTMIDRNTPVDVIGLGSRV 477



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 94/223 (42%), Gaps = 13/223 (5%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALK 214
           + PS  ++  ++    H   +   G V   GDNSS   G     D N P+    +V    
Sbjct: 62  SLPSLRNITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPV---DVVGLES 118

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           GV    + AG + T  LT  G V   G+N  GQLG+   +    P  +  L     V  I
Sbjct: 119 GV--AAIAAGGSHTCALTTNGGVKCWGANVSGQLGNETQIPYSAPVDVVELGR--GVFDI 174

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
            AG  +  A+T  G V  +G  S+  LG G  +D   P  +         V  ++AG+ H
Sbjct: 175 TAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESG---VAAIAAGEGH 231

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
             AL +SG V  WG    G LG G       P  ++ L+S +A
Sbjct: 232 TCALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESDVA 274



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 115/311 (36%), Gaps = 55/311 (17%)

Query: 116 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++      C G++  G LG G  T + V    I   S   V  ++A   H
Sbjct: 276 IAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTMTERNVPVGVIGLESG--VTAITAGGGH 333

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G V   G+N     G+   ++P   P  V  L G+    + AG   T  LT  
Sbjct: 334 TCALTTGGGVKCWGNNFYGQLGNVTAHQPGI-PVDVAGL-GIGVVAIAAGGAHTCALTTS 391

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N   QLG G T  R TP  ++ LE    VV I AG ++  A+T +G V  +G
Sbjct: 392 GGVKCWGYNYDVQLGDGTTTARSTPVDVSGLES--DVVTITAGGAHTCALTTSGGVKCWG 449

Query: 295 SGSNFCLGHGEQHDELQP-------RAIQTFRRKGIH----------------------- 324
              NF LG G   D   P         +      G H                       
Sbjct: 450 RNFNFQLGDGTMIDRNTPVDVIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGH 509

Query: 325 ------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                             V  ++AG  H  AL + G V  WG    G LG G   D+++P
Sbjct: 510 GTMNFYGTPVDVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSDRSIP 569

Query: 367 EPLSSLKSHLA 377
             +S L S +A
Sbjct: 570 VDVSGLGSGVA 580



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 117/276 (42%), Gaps = 15/276 (5%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D++   +    IT G  HT  ++ S    C GS+L G LGHG           I      
Sbjct: 469 DVIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGHGTMNFYGTPVDVIGLN--G 526

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVT 222
            V  ++A   H   ++  G V   G N S   G    ++R I  P  V  L G     +T
Sbjct: 527 DVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSDRSI--PVDVSGL-GSGVAAIT 583

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
           AGL  T  LT  G V   GSN+  QLG+  T+ +P  P  +  L     V  I AG  + 
Sbjct: 584 AGLFHTCALTTSGGVKCWGSNSSWQLGN-ITVGQPYIPVDVFGLWS--GVTAITAGLHHT 640

Query: 282 LAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            A+T G+  V  +G   +  LG G  +    P+ +            ++AG  H  AL  
Sbjct: 641 CALTTGSAQVQCWGGNYDGQLGDGTTNLRRFPQTVIGLEGS---ETAIAAGGAHTCALTV 697

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           SG +  WG  + G LG G   D++ P  +  L+S++
Sbjct: 698 SGGMKCWGDNFYGQLGDGSMHDRSTPVDVIRLESNV 733


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 16/262 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + ++ G  H+L ++S+  V + G +  G LG G  T +   +T +   S   V
Sbjct: 183 VQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTER---WTPVLVSSLTGV 239

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             V A   H+  +   G V   G+N S   G    T RP+  P +V  L  V  + + AG
Sbjct: 240 KSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPV--PVVVPGLTNV--QALAAG 295

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L   G V   G+N HGQ+G+G    + TP  +     VG +  IAAG ++ LA+
Sbjct: 296 SAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAM 352

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G+ +++G  S   LG G+   +L+P  +   R +    + +  G+ H +AL + G V
Sbjct: 353 RADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIR----MPLGTGNRHSLALHADGTV 408

Query: 345 YTWGKGYCGALGHGDEIDKTLP 366
           + WG    G LG G ++ +TLP
Sbjct: 409 WAWGVNTAGQLGDGTDLPRTLP 430



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 16/267 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L++ ++ +  S G++  G LG G  T   V    +  P  + +  V+A  
Sbjct: 690 VALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVP---VQVPGPSAMKGVAAGG 746

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  V   G V+  G+N S   G       + RPR V+         V+AG N +  + 
Sbjct: 747 SHSLAVRSDGTVWAWGNNGS---GELGDGTGLQRPRPVQVQGLGSAVAVSAGTNHSLAVQ 803

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N+ GQLG G  + R  P  ++ L     V+ ++AG ++ LA+  +G V++
Sbjct: 804 SDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLN---GVMAVSAGSAHSLALRSDGTVWA 860

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G   NF   +G+  D    + +   +  G+  VV ++AG  H +A+ S G V+ WG  +
Sbjct: 861 WGY--NF---YGQLGDATSTQRLVPIQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNF 915

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LG G +I ++ P  +  L   ++V
Sbjct: 916 YGQLGDGTKIQRSPPVQVPGLAGMVSV 942



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 116/257 (45%), Gaps = 14/257 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L + S+ +V++ G++  G LG G   T       +        V VSA  NH
Sbjct: 742 VAAGGSHSLAVRSDGTVWAWGNNGSGELGDG---TGLQRPRPVQVQGLGSAVAVSAGTNH 798

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G NS    G   T    + P  V  L GV    V+AG   +  L   
Sbjct: 799 SLAVQSDGTVWAWGGNSQGQLGD-GTGITRYVPVRVSGLNGV--MAVSAGSAHSLALRSD 855

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N +GQLG   +  R  P  +  L     VV IAAG  + LAV  +G V+++G
Sbjct: 856 GTVWAWGYNFYGQLGDATSTQRLVPIQVPGLT---GVVSIAAGTHHSLAVRSDGTVWAWG 912

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG G +     P  +Q     G+  V V+AG  H +A+ S+G V+ WG    G 
Sbjct: 913 YNFYGQLGDGTKIQRSPP--VQVPGLAGM--VSVAAGTYHSLAVHSNGTVWAWGYNNHGQ 968

Query: 355 LGHGDEIDKTLPEPLSS 371
           LG G    + LP P+SS
Sbjct: 969 LGDGTTTQRLLPVPISS 985



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 29/291 (9%)

Query: 94  LRFLQSVEHS--SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           LR L  V+    S +V  +AGN       Y   + +  SV++ G +  G LG G  T + 
Sbjct: 575 LRRLSPVQVPGLSGVVALAAGN------GYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRV 628

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPR 208
              T    P+ + VV ++A ++H+  +   G  +  G N     G   T   + P   P 
Sbjct: 629 ---TPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAVPG 685

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEE 267
           L   +       + AG   +  L   G   + G+N +GQLG G +   P P  +  P   
Sbjct: 686 LAHVVA------LAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGPSAM 739

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
            G    +AAG S+ LAV  +G V+++G+  +  LG G      +P  +Q         V 
Sbjct: 740 KG----VAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLGSA----VA 791

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           VSAG  H +A+ S G V+ WG    G LG G  I + +P  +S L   +AV
Sbjct: 792 VSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMAV 842



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           ++ +V++ G +  G LG G  T + +    +  P  A V  VS+   H+  V + G V+ 
Sbjct: 454 ADGTVWAWGDNAFGQLGDGTTTQRLLP---VQVPGLAGVDTVSSMHQHSLAVSRDGTVWA 510

Query: 187 CGDNSSFCCGHRDT-NR--PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            G N S   G   T +R  P+  P L   +       V AG   +  L   G V   G N
Sbjct: 511 WGFNGSGRLGDGTTLSRLTPVQVPGLSSMVA------VAAGSTHSLALRADGTVWAWGDN 564

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           ++G LG G TL R +P  +  L     VV +AAG  Y LAV   G V+++G      LG 
Sbjct: 565 SNGALGDGTTLRRLSPVQVPGLS---GVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGD 621

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       PR   T       VV ++AGD H +AL + G  + WG    G LG    +++
Sbjct: 622 GTT----TPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLER 677

Query: 364 TLPEPLSSL 372
           + P  +  L
Sbjct: 678 STPAAVPGL 686



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 114/262 (43%), Gaps = 19/262 (7%)

Query: 112  GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G M ++ G  H+L L S+ +V++ G +  G LG    T + V    I  P    VV ++A
Sbjct: 838  GVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVP---IQVPGLTGVVSIAA 894

Query: 171  SENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              +H+  V   G V+  G N       G +    P   P  V  L G+    V AG   +
Sbjct: 895  GTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP---PVQVPGLAGM--VSVAAGTYHS 949

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              +   G V   G N HGQLG G T  R  P    P+     V+  AA   + L V  +G
Sbjct: 950  LAVHSNGTVWAWGYNNHGQLGDGTTTQRLLP---VPISSSSGVIAAAAN-WHSLVVRTDG 1005

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V+ +GS +   LG G   D    R + T       V  +S+G  H +AL S G V+ WG
Sbjct: 1006 TVWGWGSNNASQLGDGSTSD----RKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWG 1061

Query: 349  KGYCGALGHGDEIDKTLPEPLS 370
             G  G LG G    + +P  +S
Sbjct: 1062 FGNSGQLGDGVMSMRLVPAGVS 1083



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 86/177 (48%), Gaps = 18/177 (10%)

Query: 208 RLVEALKGVPC--KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           R+  AL   P   +QV AG   +  L   G V   G NT+GQLG G  + +  P  +  L
Sbjct: 27  RIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSL 86

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +   SVV +A G  + LA+  +G V+++G   NF    G+  D      IQ +   G  V
Sbjct: 87  D---SVVALAVGYQHSLALRSDGTVWAWGD--NFFGQLGDGSDAQSQVPIQVWSLNG--V 139

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           V ++AGD H +AL S G V+ WG    G LG     D T+  PL      + VQGLS
Sbjct: 140 VAIAAGDHHSLALLSDGSVWAWGYNAHGQLGD----DTTVASPLP-----VQVQGLS 187



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           QV+A   H+  +   G V+  GDN+    G   T      P  V++L  V    V   + 
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGD-GTGITQRLPVRVQSLDSV----VALAVG 95

Query: 227 FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +   L +R  G V   G N  GQLG G       P  +  L     VV IAAG  + LA+
Sbjct: 96  YQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLN---GVVAIAAGDHHSLAL 152

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             +G V+++G  +     HG+  D+     P  +Q     G  VV +SAG  H +A+ S 
Sbjct: 153 LSDGSVWAWGYNA-----HGQLGDDTTVASPLPVQVQGLSG--VVALSAGSTHSLAVLSD 205

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G V  WG  Y G LG G   ++  P  +SSL
Sbjct: 206 GKVKAWGDNYYGQLGDGSSTERWTPVLVSSL 236



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 111/273 (40%), Gaps = 23/273 (8%)

Query: 112 GNMQ-ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQC----VSFTRINFPSAAHV 165
           G M+ I  G  H+L +    + ++ G    G LG G  + Q     V   RI  P     
Sbjct: 337 GRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP----- 391

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             +     H+  +   G V+  G N++   G   T+ P   P  V  L GV     T   
Sbjct: 392 --LGTGNRHSLALHADGTVWAWGVNTAGQLGD-GTDLPRTLPVQVPGLAGVHTLSATTSH 448

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           +        G V   G N  GQLG G T  R  P  +  L  V +V  +     + LAV+
Sbjct: 449 SLA--ARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMH---QHSLAVS 503

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++G   +  LG G     L P  +         +V V+AG  H +AL + G V+
Sbjct: 504 RDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGLSS----MVAVAAGSTHSLALRADGTVW 559

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG    GALG G  + +  P  +  L   +A+
Sbjct: 560 AWGDNSNGALGDGTTLRRLSPVQVPGLSGVVAL 592


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASEN 173
           I  G +HTL+I  N+ ++S G    G+LG+  E  + V    ++N       VQV+    
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTGLLGN--EHLEDVKIPQQLNLKQK--FVQVACGAT 81

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +  SG +F+ G N     GH + N    +P+ V     +  + +  G   + F++ 
Sbjct: 82  HSLALTISGIIFSWGKNLRGQLGHGNQN-DCLKPKEV-IQNDIIAEYIDCGDQHSAFVSK 139

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
              ++T G+  + +LGHG T D   PK +  LE+   V  ++ G ++ L VTG G VY++
Sbjct: 140 NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDY-YVTHVSCGMNHTLIVTGEGFVYAW 198

Query: 294 GSGSNFCLGHGEQ-HDELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           G G    LG  E    +  P  +    + FR+  ++  +V+AG  H +AL ++G ++TWG
Sbjct: 199 GDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYY-QVAAGSMHSLALSTNGQIFTWG 257

Query: 349 KGYCGALGHGDEID----KTLPEPLS 370
               G LG G   D     T P+ +S
Sbjct: 258 SSKSGNLGIGYNKDIQDYYTQPQKIS 283



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 8/205 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             ++ ++   +H   + ++ Q+++ G   +   G+          +L    K V   QV 
Sbjct: 21  KEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKFV---QVA 77

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   +  LTI G + + G N  GQLGHG+  D   PK +   + +     I  G  +  
Sbjct: 78  CGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEY--IDCGDQHSA 135

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            V+ N  +Y++G+G  + LGHG   DEL P+ +     +  +V  VS G  H + +   G
Sbjct: 136 FVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVL--EDYYVTHVSCGMNHTLIVTGEG 193

Query: 343 YVYTWGKGYCGALGHGDEID-KTLP 366
           +VY WG G  G LG  ++   +TLP
Sbjct: 194 FVYAWGDGMYGKLGVSEDCKTQTLP 218



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 6/142 (4%)

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
              +++ G    G LG+    D   P+ +   ++    VQ+A G ++ LA+T +G+++S+
Sbjct: 39  NNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKF---VQVACGATHSLALTISGIIFSW 95

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG Q+D L+P+ +    +  I    +  GD+H   +  +  +YTWG G   
Sbjct: 96  GKNLRGQLGHGNQNDCLKPKEV---IQNDIIAEYIDCGDQHSAFVSKNKELYTWGNGQYY 152

Query: 354 ALGHGDEIDKTLPEPLSSLKSH 375
            LGHG   D+ +P+ +  L+ +
Sbjct: 153 RLGHGVTTDELIPKKVVVLEDY 174



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)

Query: 114 MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L ++ S + FS G +L G LGHG +   C+    +   +      +   +
Sbjct: 74  VQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQND-CLKPKEV-IQNDIIAEYIDCGD 131

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+AFV ++ +++T G+   +  GH  T   +  P+ V  L+      V+ G+N T  +T
Sbjct: 132 QHSAFVSKNKELYTWGNGQYYRLGHGVTTDELI-PKKVVVLEDYYVTHVSCGMNHTLIVT 190

Query: 233 IRGHVHTCGSNTHGQLG-HGDTLDRPTPKSI----APLEEVGSVVQIAAGPSYMLAVTGN 287
             G V+  G   +G+LG   D   +  P  +        +     Q+AAG  + LA++ N
Sbjct: 191 GEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTN 250

Query: 288 GVVYSFGSGSNFCLGHGEQHD----ELQPRAI 315
           G ++++GS  +  LG G   D      QP+ I
Sbjct: 251 GQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKI 282



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/219 (20%), Positives = 97/219 (44%), Gaps = 29/219 (13%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGD-------NSSFCCGHR-------------DTNR 202
           ++++   AS+N++ F+  +GQ+F CG        N +     +             DT+ 
Sbjct: 354 SNIIFCQASQNNSFFLANNGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDL 413

Query: 203 PIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPK 260
             F RP  ++  K    + ++        ++ +G  +  G N + QLG G + +    P+
Sbjct: 414 NDFNRPFQIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQ 473

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTF 318
            +  + E  +++  A    +   +T  G V++FG+     LGH E++  +  +P+ +   
Sbjct: 474 KLQGILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDI 533

Query: 319 RRKGIHVVRVSAGDEHVVALDS-SGYVYTWGKGYCGALG 356
            +    ++ ++ G + +V++ +    +Y WG    G LG
Sbjct: 534 PQ----MIYIACGPQGMVSISAHKRQLYAWGNNIYGQLG 568



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 39/261 (14%)

Query: 124 LLISNSSVFSCGSSLCGV-----------LGHGPET-------TQCVSFTR---INFPSA 162
            L +N  +F+CGS   G+           L    +T       T    F R   I +   
Sbjct: 368 FLANNGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKN 427

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             +  +S S  HA  + Q GQ +  G N  +  G   +    + P+ ++ +       ++
Sbjct: 428 NIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMS 487

Query: 223 A-GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPS 279
           A    F+  LT +G V T G++  G LGH +      P PK +    ++  ++ IA GP 
Sbjct: 488 ACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMV---NDIPQMIYIACGPQ 544

Query: 280 YMLAVTGNG-VVYSFGSGSNFCLG--------HGEQHDELQPRAIQT---FRRKGIHVVR 327
            M++++ +   +Y++G+     LG        +  ++DE +    Q     + + + +  
Sbjct: 545 GMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIKS 604

Query: 328 VSAGDEHVVALDSSGYVYTWG 348
           V  G  H VA+D++G +Y+ G
Sbjct: 605 VDMGMFHSVAIDNNGKIYSCG 625



 Score = 41.6 bits (96), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 39/216 (18%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTA 223
           ++  + S+  +A +   G+V+T G +     GH++ N  +   P++V     +P + +  
Sbjct: 484 IIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVN---DIP-QMIYI 539

Query: 224 GLNFTGFLTIRGH---VHTCGSNTHGQLG--------------HGDTLDRPTPKSIAPLE 266
                G ++I  H   ++  G+N +GQLG                    +   + I P E
Sbjct: 540 ACGPQGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKP-E 598

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYS------FGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           EV  +  +  G  + +A+  NG +YS       G  + F +   +  D+ Q   I+T   
Sbjct: 599 EV-QIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDD-QFILIRTNEL 656

Query: 321 KGIHVVRVSAGDEHVVALD--------SSGYVYTWG 348
           +    ++VS  + H +AL         +  YVY WG
Sbjct: 657 QNQQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWG 692


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G    G LGH    +K  P+
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQ 280



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 124/240 (51%), Gaps = 9/240 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A + ++G V ++G+G
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 9/215 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
             + WG    G L   G+   + +  P  + +LK+
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKT 235



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G NS+        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +++Q A+G  + L +  +G V S G  S   LG        QP  I     + ++V  VS
Sbjct: 24  TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPAL--ETLNVALVS 81

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSL 372
            G EH +A+   G V+ WG    G LG G+  + T +P+ + +L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 32/280 (11%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS  +  L   G+  +    +P +I     K + V+ +S G EH   L   
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEE 253

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGL 381
           G V+T+G    G L          P P S  +    ++G+
Sbjct: 254 GQVFTFGGNSSGQL---------QPSPRSGQRGPQLIEGI 284



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 11/231 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             +G  + WG    G L   G+++ + + +P     S  A++ LSV+   C
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKP----HSIGALKNLSVIYISC 242



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 6/171 (3%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLK 373
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLE 178



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 13/238 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H++ + +   VF+ G+   G LG G         T+I   +   ++QVS    H
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A     YVYT G+
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ 307


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G    G LGH    +K  P+
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQ 280



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 124/240 (51%), Gaps = 9/240 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A + ++G V ++G+G
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 9/215 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
             + WG    G L   G+   + +  P  + +LK+
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKT 235



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G NS+        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            +++Q A+G  + L +  +G V S G  S   LG        QP  I     + ++V  V
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPAL--ETLNVALV 80

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSL 372
           S G EH +A+   G V+ WG    G LG G+  + T +P+ + +L
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 8/253 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   L S  +V + G ++ G LG+G  TT   +   ++ P+    V V+A  +H+  + 
Sbjct: 97  RHGLALTSAGTVLAWGRNIEGQLGNG-STTSSSTPVAVSLPTGTRAVAVAAGADHSLALT 155

Query: 180 QSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
            +G +   GDN+    G    T+R    P  V    G     + AG +    LT  G  +
Sbjct: 156 SAGTILAWGDNTFGQLGDGSTTDR--STPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTL 213

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            T G NT GQLG G T  R TP ++  L    +V  +A G  + L +T +    ++G  S
Sbjct: 214 LTWGKNTRGQLGDGTTTGRDTPVAVT-LPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNS 272

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG+G   D L P A+      G     ++AG  H  AL S G  + WG    G LG+
Sbjct: 273 FGQLGNGTTTDSLVPIAVA--LPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGN 330

Query: 358 GDEIDKTLPEPLS 370
           G   D + P  +S
Sbjct: 331 GSTTDSSEPVAVS 343



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 111/264 (42%), Gaps = 16/264 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L L S  ++ + G +  G LG G  TT   +   ++ P+   V  ++A  
Sbjct: 142 VAVAAGADHSLALTSAGTILAWGDNTFGQLGDG-STTDRSTPVAVSLPAGTTVAAIAAGR 200

Query: 173 NHAAFVLQSG-QVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +H   +  +G  + T G N+    G      RDT      P  V    GV    V  G +
Sbjct: 201 DHNLVLTSTGPTLLTWGKNTRGQLGDGTTTGRDT------PVAVTLPPGVTVTSVAGGRD 254

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  LT        G N+ GQLG+G T D   P ++A L        IAAG  +  A+T 
Sbjct: 255 HSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVA-LPTGTEATAIAAGRLHSAALTS 313

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G  +++G      LG+G   D  +P A+       +  +     D H V + S+G    
Sbjct: 314 EGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSD-HNVTITSAGAALA 372

Query: 347 WGKGYCGALGHGDEIDKTLPEPLS 370
           WG    G LG G   D++ P  +S
Sbjct: 373 WGANANGELGDGSTTDRSTPVAVS 396



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 10/250 (4%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           R     + + ++ + G +  G LG+G   ++++ V+   ++ P+   V  V+  + H   
Sbjct: 45  RSAATAVVSDTILAWGENDGGQLGNGTMIDSSEPVA---VSLPAGTAVAAVAVGDRHGLA 101

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G V   G N     G+  T      P  V    G     V AG + +  LT  G +
Sbjct: 102 LTSAGTVLAWGRNIEGQLGNGSTTS-SSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTI 160

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VVYSFGSG 296
              G NT GQLG G T DR TP +++ L    +V  IAAG  + L +T  G  + ++G  
Sbjct: 161 LAWGDNTFGQLGDGSTTDRSTPVAVS-LPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKN 219

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           +   LG G       P A+      G+ V  V+ G +H + L S      WG    G LG
Sbjct: 220 TRGQLGDGTTTGRDTPVAVT--LPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLG 277

Query: 357 HGDEIDKTLP 366
           +G   D  +P
Sbjct: 278 NGTTTDSLVP 287



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG+G  +D   P +++ L    +V  +A G  + LA+T  G V ++G      
Sbjct: 60  GENDGGQLGNGTMIDSSEPVAVS-LPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEGQ 118

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG+G       P A+      G   V V+AG +H +AL S+G +  WG    G LG G  
Sbjct: 119 LGNGSTTSSSTPVAVS--LPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGST 176

Query: 361 IDKTLPEPLS 370
            D++ P  +S
Sbjct: 177 TDRSTPVAVS 186



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 19/175 (10%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           GR H+L L S+ +  + G +  G LG+G  T   V    +  P+      ++A   H+A 
Sbjct: 252 GRDHSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVPIA-VALPTGTEATAIAAGRLHSAA 310

Query: 178 VLQSGQVFTCGDNSSFCCGH---RDTNRPIF-----RPRLVEALKGVPCKQVTAGLNFTG 229
           +   G  F  G N     G+    D++ P+        RL  A+ G          N T 
Sbjct: 311 LTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLT-AIAGRDSDH-----NVT- 363

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            +T  G     G+N +G+LG G T DR TP +++ L     V  IAAG    +A+
Sbjct: 364 -ITSAGAALAWGANANGELGDGSTTDRSTPVAVS-LPAGTRVAAIAAGDDQSMAL 416


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 125/293 (42%), Gaps = 14/293 (4%)

Query: 89  NWKRVLRFLQSVEHSS--DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHG 145
           NW   L    + E S+  D+V  S+G   I  G  HT  I+     SC G +    LG G
Sbjct: 287 NWSGQLGDGTTDERSTPVDVVGLSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDG 346

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T Q          S A    ++A + H   +   G V   G N S   G   T +   
Sbjct: 347 TTTQQSTPVVVNGLSSRA--AAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQR-R 403

Query: 206 RPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P  VE L  GV    +TAG + T  L+  G V   G+N  GQLG G T+ R TP  +  
Sbjct: 404 TPMQVEGLSSGV--ADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVEG 461

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     VV I AG S+  A++  G V  +G   +  LG+G       P  ++        
Sbjct: 462 LSS--GVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSG--- 516

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           V+ ++AGD H  AL + G V  WG  + G LG G    + +P  +  L S +A
Sbjct: 517 VMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVA 569



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 111/270 (41%), Gaps = 12/270 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G   I  G YHT  ++     +C GS+  G LG G  T +          S   V  +
Sbjct: 157 SSGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG--VTAI 214

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNF 227
           +A  +H   +   G V   G N +   G   T +   R   V  L        +TAG  +
Sbjct: 215 TAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQ---RSTPVNVLGLSSEVAAITAGDVY 271

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G+N  GQLG G T +R TP  +  L     V  IAAG  +  A+T  
Sbjct: 272 TCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSS--GVTAIAAGNDHTCAITTG 329

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  +G      LG G    +  P  +     +      ++AGD H  A+ + G V  W
Sbjct: 330 GGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSSR---AAAIAAGDGHTCAMTTGGGVSCW 386

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           G+ + G LG G    +  P  +  L S +A
Sbjct: 387 GRNWSGQLGDGTTTQRRTPMQVEGLSSGVA 416



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 9/256 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L +NS+V   G++  G LG G  T Q  +   +N  S+  VV ++A   H   +  
Sbjct: 67  YTCALTTNSAVICWGNNEFGQLGDG-TTIQRNTPVAVNGLSSG-VVAIAAGYAHTCALTT 124

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG V   G+N S   G+  T +     ++     GV    + AG   T  LT  G V   
Sbjct: 125 SGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSSGV--AAIAAGEYHTCALTTDGAVTCW 182

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSN +GQLG G T  R TP  +A L     V  I AG S+  A+T  G V  +G   N  
Sbjct: 183 GSNGYGQLGDGTTTQRSTPVQVAGLSS--GVTAITAGGSHTCALTTGGAVTCWGRNGNGQ 240

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G       P  +     +   V  ++AGD +  AL + G V  WG  + G LG G  
Sbjct: 241 LGDGTTTQRSTPVNVLGLSSE---VAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTT 297

Query: 361 IDKTLPEPLSSLKSHL 376
            +++ P  +  L S +
Sbjct: 298 DERSTPVDVVGLSSGV 313



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 124/270 (45%), Gaps = 12/270 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G   IT G  HT  +S     +C G++  G LG G  T Q  +  ++   S+  VV +
Sbjct: 412 SSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDG-TTIQRSTPVQVEGLSSG-VVAI 469

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNF 227
           +A ++H   +   G V   G N S   G+  T +    P  VE L  GV    +TAG + 
Sbjct: 470 TAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQR-STPVQVEGLSSGV--MAITAGDSH 526

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N +GQLG G T  R  P ++  L     V  IAAG S+  A++  
Sbjct: 527 TCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSS--GVAAIAAGGSHTCALSTE 584

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  +G  +   LG G + +   P  ++        V  ++AG  H  AL +SG V  W
Sbjct: 585 GGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSSG---VAAIAAGYAHTCALITSGEVTCW 641

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           G  + G LG G    +  P  ++ L S +A
Sbjct: 642 GWNWYGQLGDGTTTQRMTPVVVNGLSSEVA 671



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 110/274 (40%), Gaps = 15/274 (5%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           SS++   +AG++      Y   L +   V   G++  G LG G    +      +   S 
Sbjct: 259 SSEVAAITAGDV------YTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSG 312

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             V  ++A  +H   +   G V   G N     G   T +    P +V  L       + 
Sbjct: 313 --VTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQ-STPVVVNGLS-SRAAAIA 368

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T  +T  G V   G N  GQLG G T  R TP  +  L     V  I AG S+  
Sbjct: 369 AGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGLSS--GVADITAGDSHTC 426

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A++  G V  +G+  +  LG G       P  ++        VV ++AGD H  AL + G
Sbjct: 427 ALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVEGLSSG---VVAITAGDSHTCALSTEG 483

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            V  WG    G LG+G    ++ P  +  L S +
Sbjct: 484 GVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSGV 517



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 93/223 (41%), Gaps = 13/223 (5%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALK 214
           N  SA H   ++A + +   +  +  V   G+N     G   T   N P+    L   + 
Sbjct: 51  NIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVAVNGLSSGVV 110

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
                 + AG   T  LT  G V   G+N  GQLG+G T+ R TP  +A L     V  I
Sbjct: 111 -----AIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSS--GVAAI 163

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           AAG  +  A+T +G V  +GS     LG G       P  +         V  ++AG  H
Sbjct: 164 AAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG---VTAITAGGSH 220

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
             AL + G V  WG+   G LG G    ++ P  +  L S +A
Sbjct: 221 TCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSSEVA 263



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 108/268 (40%), Gaps = 10/268 (3%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G   IT G  HT  ++     +C G +  G LG G  T +      +   S   V  +
Sbjct: 208 SSGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSS--EVAAI 265

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A + +   +   G V   G N S   G   T+       +V    GV    + AG + T
Sbjct: 266 TAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGV--TAIAAGNDHT 323

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +T  G V   G N + QLG G T  + TP  +  L        IAAG  +  A+T  G
Sbjct: 324 CAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSS--RAAAIAAGDGHTCAMTTGG 381

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V  +G   +  LG G       P  ++        V  ++AGD H  AL + G V  WG
Sbjct: 382 GVSCWGRNWSGQLGDGTTTQRRTPMQVEGLSSG---VADITAGDSHTCALSTEGGVTCWG 438

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHL 376
               G LG G  I ++ P  +  L S +
Sbjct: 439 NNESGQLGDGTTIQRSTPVQVEGLSSGV 466



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 112/269 (41%), Gaps = 10/269 (3%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G + I  G  HT  ++ S   SC G++  G LG+G    +          S   V  +
Sbjct: 106 SSGVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSSG--VAAI 163

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A E H   +   G V   G N     G   T +     ++     GV    +TAG + T
Sbjct: 164 AAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGV--TAITAGGSHT 221

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G V   G N +GQLG G T  R TP ++  L     V  I AG  Y  A+T  G
Sbjct: 222 CALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSS--EVAAITAGDVYTCALTTGG 279

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V  +G+  +  LG G   +   P  +         V  ++AG++H  A+ + G V  WG
Sbjct: 280 GVTCWGANWSGQLGDGTTDERSTPVDVVGLSSG---VTAIAAGNDHTCAITTGGGVSCWG 336

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
                 LG G    ++ P  ++ L S  A
Sbjct: 337 VNQYSQLGDGTTTQQSTPVVVNGLSSRAA 365



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 112/272 (41%), Gaps = 14/272 (5%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G M IT G  HT  ++     +C G +  G LG G  T + +    +   S   V  +
Sbjct: 514 SSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSG--VAAI 571

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALK-GVPCKQVTAGLN 226
           +A  +H   +   G V   G N+    G  D  R     P  VE L  GV    + AG  
Sbjct: 572 AAGGSHTCALSTEGGVTCWGWNTYDQLG--DGTRTNHNTPVQVEGLSSGV--AAIAAGYA 627

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  L   G V   G N +GQLG G T  R TP  +  L     V  I AG ++  A++ 
Sbjct: 628 HTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSS--EVAAIVAGYAHTCALST 685

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G V  +G    + LG+G       P  +         V  ++AGD H   L + G V  
Sbjct: 686 GGGVTCWGWNKYYQLGNGTISQRSIPMDVDGLSSG---VAALAAGDAHTCGLSTGGGVTC 742

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           WG    G LG G    +T P  ++ L  +L V
Sbjct: 743 WGWDVYGQLGVGTIAYRTTPVDVTVLFVYLPV 774


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+S    H A V + G+VFT G+ S    GH   +     P+LVE+L       V  G
Sbjct: 267 VHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH-FTHPKLVESLAVTNIDYVACG 325

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + T G  SN  G LGHG  +    PK ++ PLE +  V+ IA G  + 
Sbjct: 326 EYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGL-QVLSIACGTWHS 384

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG++     P+ +Q+    G+  ++V+ G  H  A+   
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSL--NGLKTIKVACGVWHTAAIVEV 442

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 443 MSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSL 483



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  IS S     +  GS+  G+LGHG + +  +   R++ P     V+ ++  
Sbjct: 322 VACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIP-KRVSGPLEGLQVLSIACG 380

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 229
             H+A    +G++FT GD +    GH D  + +  P+ +++L G+   +V  G+  T   
Sbjct: 381 TWHSALATSNGKLFTFGDGTFGALGHGD-RKSVSSPKELQSLNGLKTIKVACGVWHTAAI 439

Query: 230 --FLTIRG------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              ++  G       + T G     +LGHG+      P  ++ L +  +  Q+A G +  
Sbjct: 440 VEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDY-NFQQLACGHTMT 498

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  +   LG+   + ++ P  +Q  R  G  V  +S G  H   L S 
Sbjct: 499 VALTTSGHVFTMGGSAYGQLGNPSSNGKI-PCLVQD-RLVGEFVEEISCGAYHTAVLTSR 556

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWG+G  G LGHGD  D+ LP  + +LK
Sbjct: 557 SEVFTWGRGANGQLGHGDTEDRKLPTLVEALK 588



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 10/191 (5%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q++ G+     +T +G V T G  + G+LGHG       P
Sbjct: 249 TKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHP 308

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           K +  L  V ++  +A G  +  A++ +G ++++G GSN    LGHG       P+ + +
Sbjct: 309 KLVESL-AVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRV-S 366

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+ V+ ++ G  H     S+G ++T+G G  GALGHGD    + P+ L SL     
Sbjct: 367 GPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSL----- 421

Query: 378 VQGLSVLAEVC 388
             GL  +   C
Sbjct: 422 -NGLKTIKVAC 431


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G    G LGH    +K  P+
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQ 280



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 124/240 (51%), Gaps = 9/240 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A + ++G V ++G+G
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 9/215 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
             + WG    G L   G+   + +  P  + +LK+
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKT 235



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G NS+        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            +++Q A+G  + L +  +G V S G  S   LG        QP  I     + ++V  V
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPAL--ETLNVALV 80

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSL 372
           S G EH +A+   G V+ WG    G LG G+  + T +P+ + +L
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCSGCLGLG-DVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +   ++   L      +V  G   +  LT  G V+  G N  G
Sbjct: 99  WGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++  P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 277 TPVVVEKDRI 286



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +   + ++F  G N S C G  D  +    PR +++L  K + C    +G +    
Sbjct: 32  NEVLYTTINDEIFVLGTNCSGCLGLGDV-QSTLEPRRLDSLSDKKIACLSYGSGPHII-L 89

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  ++       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G  ++  +G G   ++  PR +    +  + VV ++ G    VA+  +G VY WG  
Sbjct: 150 YAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKV-VVNIACGQMCSVAVVDTGEVYVWGYN 208

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 209 GNGQLGLGSSGNQPTPCRVAALQ 231


>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
          Length = 985

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 127/271 (46%), Gaps = 14/271 (5%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +  G +QI  GR H+L +++   VF+ GS+  G LG     T      RIN      VVQ
Sbjct: 61  SGVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRIN--QLNEVVQ 118

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V++  +H   + + G+V+  G+ +   C H         P LVE L  +P  +V AG   
Sbjct: 119 VASGSDHCIALTEDGRVYVWGEQADGRCIHH--------PELVEHLNAIPIVRVEAGARH 170

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              ++  G V T G N  G+LG  D   + +   +  ++ +G VV+ A G ++ + +T  
Sbjct: 171 CVAISASGAVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLG-VVEAACGDNHTILLTHC 229

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G  +SFGS +    G G++  E +P         G HV R++AG  H +A+   G  Y +
Sbjct: 230 GRTFSFGSDALGQCGFGKKL-EKRPNPTAVSDLIGSHVTRIAAGACHTIAI-IRGSPYPF 287

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G    G LG+G  + ++ P     L    AV
Sbjct: 288 GLNSSGQLGNGKIMTQSTPRKTDDLDHVTAV 318



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 105/226 (46%), Gaps = 21/226 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+  E H  F+ +  ++++ G N     G    +   F    V    GV   Q+ AG
Sbjct: 12  VKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAG 71

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +   G V   GSN HGQLG  +T+  +  PK I  L EV   VQ+A+G  + +A
Sbjct: 72  RAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEV---VQVASGSDHCIA 128

Query: 284 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +T +G VY +G  ++  C+ H E  + L            I +VRV AG  H VA+ +SG
Sbjct: 129 LTEDGRVYVWGEQADGRCIHHPELVEHLN----------AIPIVRVEAGARHCVAISASG 178

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            V+TWG+   G LG  D        P +S+     + GL V+   C
Sbjct: 179 AVFTWGQNNSGELGMDDF------RPQTSVHHVTQMDGLGVVEAAC 218


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 99/200 (49%), Gaps = 18/200 (9%)

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G + S   G   T   +  P  + AL+      V+AG + +  LT  G V + G+  HG+
Sbjct: 11  GQHGSLGQGDAVTQLSVLTP--IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHG+      P+ IA  +    V +I+AG ++ LA+T +G  YSFG G    LGHG++ 
Sbjct: 69  LGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDET 128

Query: 308 DELQPRAIQTFRRKGIH---------------VVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           D+L PR I T R  G                 +  V+AG  H + L + G VY++G G  
Sbjct: 129 DQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           GALGHGD   +  P  + +L
Sbjct: 188 GALGHGDRDKRLRPTMIEAL 207



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 113/239 (47%), Gaps = 23/239 (9%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V S G    G LG G   TQ    T I    A  VV VSA  +H+  + + G+VF+ G+ 
Sbjct: 5   VLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNG 64

Query: 191 SSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
                GH +     F PR +   +   GV   +++AG   +  LT  G  ++ G    G+
Sbjct: 65  LHGRLGHGN-EETCFEPRRIAFFDTTAGV--AKISAGTTHSLALTKDGKAYSFGFGMFGR 121

Query: 248 LGHGDTLDRPTPKSIA--------PL------EEVGSVVQ-IAAGPSYMLAVTGNGVVYS 292
           LGHGD  D+  P+ I         P+       E   V++ +AAG  + L +T +G VYS
Sbjct: 122 LGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYS 181

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           FG+G    LGHG++   L+P  I+    +   +V ++ G  + + LD  G V+ +G  Y
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADR--RIVSMACGSANTLVLDDEGRVFFFGLDY 238



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 2/145 (1%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +RG V + G   HG LG GD + + +  +     E   VV ++AG  + L +T  G V+S
Sbjct: 1   MRGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFS 60

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FG+G +  LGHG +    +PR I  F      V ++SAG  H +AL   G  Y++G G  
Sbjct: 61  FGNGLHGRLGHGNEETCFEPRRIAFFDTTA-GVAKISAGTTHSLALTKDGKAYSFGFGMF 119

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLA 377
           G LGHGDE D+ LP  + +L+ H A
Sbjct: 120 GRLGHGDETDQLLPREI-TLRGHGA 143



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 25/272 (9%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSAS 171
           + ++ G +H+L+++    VFS G+ L G LGHG E T C    RI  F + A V ++SA 
Sbjct: 40  VAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEET-CFEPRRIAFFDTTAGVAKISAG 98

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---------------RPIFRPRLVEALKGV 216
             H+  + + G+ ++ G       GH D                  P    R+ E     
Sbjct: 99  TTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDP 158

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + V AG   +  LT  G V++ G+   G LGHGD   R  P  I  L +   +V +A 
Sbjct: 159 VIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADR-RIVSMAC 217

Query: 277 GPSYMLAVTGNGVVYSFG-SGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           G +  L +   G V+ FG   S F     G+    L P A+         +  V AG+ H
Sbjct: 218 GSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEE----ITEVRAGEGH 273

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            + L   G +  +G G  G LG GDE ++  P
Sbjct: 274 CLLLTREGKLLAFGLGKNGRLGLGDETNRLAP 305



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 29/283 (10%)

Query: 108 ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT----------- 155
           +T+AG  +I+ G  H+L L  +   +S G  + G LGHG ET Q +              
Sbjct: 87  DTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPP 146

Query: 156 ---RINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
              R+       V++ V+A   H+  +   G+V++ G       GH D ++ + RP ++E
Sbjct: 147 VGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRL-RPTMIE 205

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVG 269
           AL       +  G   T  L   G V   G +     +   G       P ++   EE+ 
Sbjct: 206 ALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEI- 264

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-- 327
              ++ AG  + L +T  G + +FG G N  LG G++ + L P A+ TF   G   V   
Sbjct: 265 --TEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAV-TFPSNGTTSVEID 321

Query: 328 VSAGDEHVVAL-DSSG---YVYTWGKGYCGALGHGDEIDKTLP 366
           ++ G +H +AL D  G    +Y +G G  G L +G   D+  P
Sbjct: 322 IACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGHRQDRASP 364



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 15/236 (6%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G +H+LL++ +  V+S G+ + G LGHG +  + +  T I   +   +V ++    
Sbjct: 162 HVAAGYFHSLLLTTDGRVYSFGAGVMGALGHG-DRDKRLRPTMIEALADRRIVSMACGSA 220

Query: 174 HAAFVLQSGQVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +   +   G+VF  G D S F        R +  P  +   + +   +V AG      LT
Sbjct: 221 NTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEI--TEVRAGEGHCLLLT 278

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSV-VQIAAGPSYMLA---VTGN 287
             G +   G   +G+LG GD  +R  P ++  P     SV + IA G  + LA   V G 
Sbjct: 279 REGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGE 338

Query: 288 GV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH----VVRVSAGDEHVVAL 338
           G  +Y+FGSG    L +G + D   P A  T     +H       +SAG  H + L
Sbjct: 339 GPRLYAFGSGDQGQLANGHRQDRASPTATTTSLPALLHQHIVPAAISAGKAHSLVL 394


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF  G++  G LG G +    +   RI+      +  +S  S  H       G+V+T
Sbjct: 234 NDEVFVLGTNCSGCLGTG-DVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYT 292

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G + +  LT  G V+  G N  G
Sbjct: 293 WGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSG 352

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +      IA G    +AV  +G VY +G   N  LG G  
Sbjct: 353 QVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSS 412

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI V RV+ G  H + L   G +Y WG    G LG G++ +++ P
Sbjct: 413 GNQPTPCRIAAL--QGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYP 470

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 471 IPVPVEKDRI 480



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 4/186 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           VV+V+   +H+  +   G+V+  G N+S   G   T N+PI R R+   L+      +  
Sbjct: 324 VVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPR-RVTSCLQNKIATNIAC 382

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G V+  G N +GQLG G + ++PTP  IA L+ +  V ++  G ++ L 
Sbjct: 383 GQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVTCGYAHTLV 441

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G +Y++G+ S   LG G + ++  P  +   + + I +    +      A   SG+
Sbjct: 442 LTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPVEKDRIIEIAACHSAHTSA-AKTQSGH 500

Query: 344 VYTWGK 349
           VY WG+
Sbjct: 501 VYMWGQ 506



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L  T N  V+  G+  + CLG G+  + ++PR I +   K I  +   +G  HVV   +
Sbjct: 228 VLYATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSG-PHVVVATA 286

Query: 341 SGYVYTWGKGYCGALGHG 358
            G VYTWG      LG+G
Sbjct: 287 EGEVYTWGHNAYSQLGNG 304


>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
          Length = 475

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 32/254 (12%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H L+I+N  +V+S G + CG LGHG    +  S   I+   +  VV  +  +NH   + +
Sbjct: 112 HNLIITNEGNVYSWGRNECGQLGHG-NRVRYDSPKPIDSLQSYKVVNGATGKNHTLCLTE 170

Query: 181 SGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           +G VF  GDN+      G+  TN P   P  + A KG P   V+ G  F+  L   G+V+
Sbjct: 171 NGDVFAFGDNAQGQLGLGNLSTNVP--SPTHI-AYKGNPIVDVSCGGEFSVILDCEGYVY 227

Query: 239 TCGSNTHGQLGH---------GDTLDRPTPKS---------------IAPLEEVGSVVQI 274
           + G   +GQLG+         G+ +     K+               + PL +V  +  I
Sbjct: 228 SFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVEKLKGGQVLPLNDV-KITSI 286

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G ++++A+     V+++G G    LGH EQ DE  PR +  F R G   V+V AG   
Sbjct: 287 SCGNNHVVALDSKKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAGRGAVQVYAGYSF 346

Query: 335 VVALDSSGYVYTWG 348
            +AL+  G    WG
Sbjct: 347 SIALNEMGSTMFWG 360



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 26/221 (11%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +   G V++ G N     GH +  R    P+ +++L+         G N T  LT
Sbjct: 111 NHNLIITNEGNVYSWGRNECGQLGHGNRVR-YDSPKPIDSLQSYKVVNGATGKNHTLCLT 169

Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V   G N  GQLG G+ + + P+P  IA   +   +V ++ G  + + +   G VY
Sbjct: 170 ENGDVFAFGDNAQGQLGLGNLSTNVPSPTHIA--YKGNPIVDVSCGGEFSVILDCEGYVY 227

Query: 292 SFG-----------SGSNFCLGHGEQHDELQ-----PRAIQTFR------RKGIHVVRVS 329
           SFG            G  F  G+    D ++     P  ++  +         + +  +S
Sbjct: 228 SFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVEKLKGGQVLPLNDVKITSIS 287

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            G+ HVVALDS   V+TWG G  G LGH ++ D+  P  L+
Sbjct: 288 CGNNHVVALDSKKRVFTWGFGGYGRLGHSEQKDEHTPRLLT 328



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 305 EQHDELQPRAIQTFRRK---GIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGD 359
           E+++ +     +  R K   GI V RV  G    H + + + G VY+WG+  CG LGHG+
Sbjct: 78  EKYENVGKNLFKPHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGN 137

Query: 360 EIDKTLPEPLSSLKSHLAVQG 380
            +    P+P+ SL+S+  V G
Sbjct: 138 RVRYDSPKPIDSLQSYKVVNG 158


>gi|387928890|ref|ZP_10131567.1| regulator of chromosome condensation-like protein [Bacillus
           methanolicus PB1]
 gi|387585708|gb|EIJ78032.1| regulator of chromosome condensation-like protein [Bacillus
           methanolicus PB1]
          Length = 641

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 130/282 (46%), Gaps = 12/282 (4%)

Query: 105 DIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +IV      +++  G +H+L L+SNS+V + G +  G LG G   +  V  + I   +A 
Sbjct: 76  EIVTALTNAIEVAAGVFHSLALLSNSTVRAWGDNFAGQLGDGTFNSSTVPVSVIGLTNA- 134

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             + +SA  NH+  +L  G V   G N     G+  T+     P ++  L  V    V+A
Sbjct: 135 --IAISAGLNHSLALLNDGTVRAWGGNFFGQLGNG-TDITSNAPVIILGLSNV--VAVSA 189

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSY 280
           G   +  L   G V   G+N  GQLG G   DR  P   K I     + +V+ I+AG  +
Sbjct: 190 GGEHSLALLYDGTVCAWGANYSGQLGDGTNTDRSIPVQVKGIGGSGVLNNVIAISAGEFH 249

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVAL 338
            LA+  +G V ++G+     LG G   +   P  ++     G+  +V  ++AG  H +AL
Sbjct: 250 SLALLNDGTVLAWGNNDYGQLGDGTNTESNVPVQVKGTGGYGVLNNVAAIAAGGFHSLAL 309

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
            + G V  WG    G LG G   D  +P  +S L +   + G
Sbjct: 310 LNDGTVLAWGNNESGQLGDGSNSDSDIPVTVSGLTNSNTIAG 351



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 26/270 (9%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----S 161
           V  S  ++ IT G +H+L ++S+  V + G++  G LG G       +    N P    +
Sbjct: 28  VNGSTNSIAITGGIFHSLSVLSDGLVCAWGANYSGQLGDG-------TLNDSNIPEIVTA 80

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPC 218
             + ++V+A   H+  +L +  V   GDN +   G    N    P+    L  A+     
Sbjct: 81  LTNAIEVAAGVFHSLALLSNSTVRAWGDNFAGQLGDGTFNSSTVPVSVIGLTNAIA---- 136

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             ++AGLN +  L   G V   G N  GQLG+G  +    P  I  L    +VV ++AG 
Sbjct: 137 --ISAGLNHSLALLNDGTVRAWGGNFFGQLGNGTDITSNAPVIILGLS---NVVAVSAGG 191

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVV 336
            + LA+  +G V ++G+  +  LG G   D   P  ++     G+  +V+ +SAG+ H +
Sbjct: 192 EHSLALLYDGTVCAWGANYSGQLGDGTNTDRSIPVQVKGIGGSGVLNNVIAISAGEFHSL 251

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           AL + G V  WG    G LG G   +  +P
Sbjct: 252 ALLNDGTVLAWGNNDYGQLGDGTNTESNVP 281



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 104/240 (43%), Gaps = 19/240 (7%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           + FS G++  G LG G   T   S   ++   + + + ++    H+  VL  G V   G 
Sbjct: 2   TTFSWGNNEFGQLGDG---TNIDSNVPVSVNGSTNSIAITGGIFHSLSVLSDGLVCAWGA 58

Query: 190 NSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           N S   G     D+N P     L  A+      +V AG+  +  L     V   G N  G
Sbjct: 59  NYSGQLGDGTLNDSNIPEIVTALTNAI------EVAAGVFHSLALLSNSTVRAWGDNFAG 112

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G       P S+  L    + + I+AG ++ LA+  +G V ++G      LG+G  
Sbjct: 113 QLGDGTFNSSTVPVSVIGLT---NAIAISAGLNHSLALLNDGTVRAWGGNFFGQLGNGTD 169

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P  I        +VV VSAG EH +AL   G V  WG  Y G LG G   D+++P
Sbjct: 170 ITSNAPVIILGLS----NVVAVSAGGEHSLALLYDGTVCAWGANYSGQLGDGTNTDRSIP 225



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G+     LG G   D   P ++        + + ++ G  H +++ S G V  WG  
Sbjct: 4   FSWGNNEFGQLGDGTNIDSNVPVSV----NGSTNSIAITGGIFHSLSVLSDGLVCAWGAN 59

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           Y G LG G   D  +PE +++L + + V
Sbjct: 60  YSGQLGDGTLNDSNIPEIVTALTNAIEV 87


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 46/291 (15%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTR----INF 159
           + G  Q+  G  HT+ +    +V+S G+S CG LG       P   +   +      I  
Sbjct: 22  NKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIEL 81

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----------RPIFRPR 208
             +  V+Q++  + H   + Q G++++ G       GH DT+           +P  +P+
Sbjct: 82  LQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQP--KPK 139

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------RPT 258
           L+  LK +  KQV  G   T  +   GH+++ G+   GQLGH DT            +P 
Sbjct: 140 LIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPI 199

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ------ 311
           P+ +  L+    ++  + G  + + +T  G +Y FG GS   LG G      L       
Sbjct: 200 PRCVTALKPF-KLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPF 258

Query: 312 ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
              P+ I++ +  GI +V +S GD H +AL   G+VY WG+   G LG  D
Sbjct: 259 MPVPKKIESLQ--GIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDD 307



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 19/171 (11%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 256
           P  ++ L+     QV  G   T  + I+G+V++ G++  GQLG     D          +
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ----HDE--- 309
           PTP+ I  L+ V  V+QIA G ++ +A+T +G +YS+G G    LGH +      DE   
Sbjct: 74  PTPRIIELLQSV-KVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 310 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             QP+       K + V +V+ G  H VA+ ++G++Y+WG G CG LGH D
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPD 183



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 50/235 (21%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT---------------QCVSFTRIN 158
           Q+  G+ HT+ +++N  ++S G+  CG LGH P+T+               +CV+  +  
Sbjct: 151 QVACGKAHTVAVLNNGHLYSWGAGACGQLGH-PDTSSFPADEDGYPYQPIPRCVTALK-- 207

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR----------DTNRPIFRP- 207
                 ++  S  + H   +   G+++  G  S   CG            D +   F P 
Sbjct: 208 ---PFKLIHASCGDVHTMVLTDQGEIYCFGGGS---CGQLGFGNISQMPLDVDSCPFMPV 261

Query: 208 -RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 256
            + +E+L+G+    ++ G + +  L+  GHV+  G  T+GQLG  D  D          +
Sbjct: 262 PKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ 321

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           P P+ +  L     +V I+ G ++ LA+T  G +YSF  G N C   G+   EL+
Sbjct: 322 PFPQKVVALMN-KKIVAISCGETHTLALTEGGHLYSF--GGNTCGQLGQYVKELE 373



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 13/114 (11%)

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------- 308
           +P P  I  L   G + Q+A G  + +AV   G VYS+G+ +   LG     D       
Sbjct: 11  QPHPLEIDMLRNKG-IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69

Query: 309 ---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
              +  PR I+  +   + V++++ GD H VAL   G +Y+WG G CG LGH D
Sbjct: 70  YPYQPTPRIIELLQ--SVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPD 121


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 116/265 (43%), Gaps = 16/265 (6%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT  L S+  V+  G +  G LG G              PS   V  ++A + H
Sbjct: 467 IAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAIAAGDYH 524

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +  SG V+  G N S   G     D + P+    L   +       + AG   T  L
Sbjct: 525 TCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVT-----VIAAGRFHTCAL 579

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G+N  GQLG G T +R TP +++ L     V  IAAG  +  A+T +G V+
Sbjct: 580 TSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPS--GVTAIAAGGWHTCALTSSGEVW 637

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      LG G   +   P A+         V  ++AG EH  AL SSG V+ WG  Y
Sbjct: 638 CWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGWEHTCALTSSGEVWCWGDNY 694

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHL 376
            G LG G   +++ P  +S L S +
Sbjct: 695 YGQLGDGTTTNRSTPGAVSGLPSGV 719



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 119/270 (44%), Gaps = 12/270 (4%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 309 SGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSG--VETIA 366

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFT 228
           A + H   ++ SG V+  G N+S   G   T      P  V  L  GV    + AG   T
Sbjct: 367 AGDYHTCALMSSGGVWCWGRNNSGQLGD-GTTTARSTPAAVSGLPSGV--TAIAAGGLHT 423

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N  GQLG G   D  TP +++ L     V  IAAG  +  A+T +G
Sbjct: 424 CALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS--GVETIAAGGWHTCALTSSG 481

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  ++  LG G     + P A+         V  ++AGD H  AL  SG V+ WG
Sbjct: 482 GVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGDYHTCALTGSGGVWCWG 538

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               G LG G   D++ P  +S L S + V
Sbjct: 539 YNLSGQLGDGTTTDRSTPVAVSGLTSGVTV 568



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 118/271 (43%), Gaps = 17/271 (6%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S    C G++  G LG+G    +         PS   V  ++
Sbjct: 104 SGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIA 161

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP--CKQVTAGLN 226
           A  +H   ++ SG V   GDN     G    TNR     R   A+ G+P     + AG  
Sbjct: 162 AGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNR-----RTPVAVSGLPSGVTAIAAGGL 216

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            T  LT  G V   G N +GQLG G  T  R TP ++  L     +  IAAG  +  A+ 
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS--GMTAIAAGGLHTCALM 274

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+ +G   +  LG G   D   P A+         V  ++AGD H  AL  SG V+
Sbjct: 275 SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG---VTAIAAGDYHTCALTGSGEVW 331

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            WG    G LG G    ++ P  +S L S +
Sbjct: 332 CWGGNGFGQLGDGTTTARSTPAAVSGLPSGV 362



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 117/269 (43%), Gaps = 15/269 (5%)

Query: 112 GNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  G  HT  ++ S    C G +  G LG G  TT+         PS   V  ++A
Sbjct: 54  GVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSG--VTAIAA 111

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFT 228
              H   +  SG V   G N S   G    N   F      A+ G+P     + AG + T
Sbjct: 112 GNYHTCALTGSGGVRCWGANYSGQLG----NGLTFGRSTPGAVSGLPSGVTAIAAGGDHT 167

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G
Sbjct: 168 CALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPS--GVTAIAAGGLHTCALTGSG 225

Query: 289 VVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            V+ +G      LG G   +    P A+         +  ++AG  H  AL SSG V+ W
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSG---MTAIAAGGLHTCALMSSGGVWCW 282

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           G+   G LG G + D + P  +S L S +
Sbjct: 283 GRNDSGQLGDGSDTDSSTPVAVSGLPSGV 311



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 114/269 (42%), Gaps = 13/269 (4%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L+S+  V   G +  G LG G  T +         PS   V  ++
Sbjct: 155 SGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSG--VTAIA 212

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTAGLNF 227
           A   H   +  SG+V+  G N     G   T      P    A+ G+P     + AG   
Sbjct: 213 AGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTP---AAVGGLPSGMTAIAAGGLH 269

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G V   G N  GQLG G   D  TP +++ L     V  IAAG  +  A+TG+
Sbjct: 270 TCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPS--GVTAIAAGDYHTCALTGS 327

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G      LG G       P A+         V  ++AGD H  AL SSG V+ W
Sbjct: 328 GEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSG---VETIAAGDYHTCALMSSGGVWCW 384

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           G+   G LG G    ++ P  +S L S +
Sbjct: 385 GRNNSGQLGDGTTTARSTPAAVSGLPSGV 413



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 113/262 (43%), Gaps = 20/262 (7%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S  V+  G +L G LG G  T +          S   V  ++
Sbjct: 513 SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG--VTVIA 570

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVP--CKQVTAG 224
           A   H   +  SG V+  G N     G    TNR  P+       A+ G+P     + AG
Sbjct: 571 AGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPV-------AVSGLPSGVTAIAAG 623

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+
Sbjct: 624 GWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGWEHTCAL 681

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V+ +G      LG G   +   P A+         V  ++AG  H  AL  SG V
Sbjct: 682 TSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGV 738

Query: 345 YTWGKGYCGALGHGDEIDKTLP 366
             WG    G LG G  + +T P
Sbjct: 739 MCWGNNGDGQLGDGRPLYRTTP 760



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 11/216 (5%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  GR+HT  L S+  V+  G++  G LG G  T +         PS   V  ++A   H
Sbjct: 569 IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG--VTAIAAGGWH 626

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 232
              +  SG+V+  GDN     G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 627 TCALTSSGEVWCWGDNYYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGWEHTCALT 682

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V  
Sbjct: 683 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGSGGVMC 740

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           +G+  +  LG G       P  + T    G+++  +
Sbjct: 741 WGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 776



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 78/164 (47%), Gaps = 7/164 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T  LT  G V   G N  GQLG G    R TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPS--GVT 107

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG  +  A+TG+G V  +G+  +  LG+G       P A+         V  ++AG 
Sbjct: 108 AIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGG 164

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           +H  AL SSG V  WG  Y G LG G   ++  P  +S L S +
Sbjct: 165 DHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGV 208



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 67/155 (43%), Gaps = 9/155 (5%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G +HT  L S+  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 615 SGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG--VTAIA 672

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  SG+V+  GDN     G    TNR    P  V  L  GV    + AG+  
Sbjct: 673 AGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGVYH 728

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           T  LT  G V   G+N  GQLG G  L R TP  +
Sbjct: 729 TCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 763


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 317 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 375

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 230
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 434

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 493

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 494 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 551

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 552 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 583



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 262 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 320

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 321 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 379

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 437

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 438 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSL 478



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 370 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 427

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 428 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 486

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 487 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 544

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 545 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 598

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 599 SICIHKWVSG 608



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 4/193 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 226 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 285

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 286 EEVGGRLGHGIQVDISRPKLVEFL-ALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 344

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 345 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 403

Query: 360 EIDKTLPEPLSSL 372
               + P+ + SL
Sbjct: 404 RESVSYPKEVQSL 416



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-- 149
           + ++   S+ H++ IVE      Q  T       +S+  +F+ G      LGHG + T  
Sbjct: 420 KTVKVACSIWHTAAIVEVMG---QTATS------MSSRKLFTWGDGDKNRLGHGNKETYL 470

Query: 150 --QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
              CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  +
Sbjct: 471 LPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGKL 522

Query: 205 FRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P LV+  L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  + 
Sbjct: 523 --PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVE 580

Query: 264 PLEE 267
            L +
Sbjct: 581 ALRD 584


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 70   IYAGMSRNVQIELLNRCNGNWKRV-LRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LIS 127
            +YA    N   +L N  +G +  V LR +   +  S +       +Q++ G YH+L L +
Sbjct: 744  VYA-WGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTA-----VQVSAGYYHSLALDA 797

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV---QVSASENHAAFVLQSGQV 184
              ++++ G +  G LG+G      +  T   +P  A  V   QVS   +H A +   G  
Sbjct: 798  RGNIWAWGFNQFGELGNGNNINSAIP-TLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNT 856

Query: 185  FTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            ++ G N     G+ +        P+  PR    ++ +   QV+AG + +  +  +G+   
Sbjct: 857  WSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI---QVSAGADHSLIIDTKGNTWA 913

Query: 240  CGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYSFGS 295
             G N  G+LG+G +     P P  +   E  G+V  +Q++AG  + LA+  NG  +++G 
Sbjct: 914  WGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGG 973

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              +  LG G       P  +Q  +  G +  V+VSAG  H + +D  G  + WG    G 
Sbjct: 974  NDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQ 1033

Query: 355  LGHGDEIDKTLPEPLS 370
            LG+G   + ++P P++
Sbjct: 1034 LGNGTISNSSIPTPVA 1049



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 16/286 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQV 168
            +Q++ G   +L + S+  V++ G++  G LG+G          R+  P    S    VQV
Sbjct: 726  VQVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQV 785

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKG---VPCKQVTAG 224
            SA   H+  +   G ++  G N     G+  + N  I  P L +  +    V   QV+ G
Sbjct: 786  SAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAI--PTLAQYPRDAGTVTAIQVSGG 843

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYML 282
             + T  +  +G+  + G N  GQLG+G+ +D   P  +    + G+V  +Q++AG  + L
Sbjct: 844  FHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSL 903

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA--IQTFRRKG-IHVVRVSAGDEHVVALD 339
             +   G  +++G      LG+G    +  P    ++     G +  ++VSAG  H +A+D
Sbjct: 904  IIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAID 963

Query: 340  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
             +G  + WG    G LG G      +P  +   K+  AV  + V A
Sbjct: 964  KNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSA 1009



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 16/220 (7%)

Query: 178 VLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           V   G  +  G N+    G       N+P+   +   A       QV+AG   +  +   
Sbjct: 682 VGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGSD 741

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--------SVVQIAAGPSYMLAVTG 286
           G+V+  G+N  GQLG+G +       S  PL  +         + VQ++AG  + LA+  
Sbjct: 742 GYVYAWGNNESGQLGNGSSGGY----STVPLRVIDPNDPRSGLTAVQVSAGYYHSLALDA 797

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVY 345
            G ++++G      LG+G   +   P   Q  R  G +  ++VS G  H  A+D+ G  +
Sbjct: 798 RGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTW 857

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           +WG  + G LG+G+ ID  +P P+   +    V+ + V A
Sbjct: 858 SWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSA 897



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 11/164 (6%)

Query: 214 KGVPCKQVTAGLNF--TGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPL 265
           +G+   Q++   +F   GF   +   G+ +  G N +GQLG G    R  P   K  A  
Sbjct: 660 QGIKFNQISGSRDFGDRGFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGA 719

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQ-TFRRKG 322
               + VQ++AG    LAV  +G VY++G+  +  LG+G    +  +  R I     R G
Sbjct: 720 SADFTYVQVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSG 779

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +  V+VSAG  H +ALD+ G ++ WG    G LG+G+ I+  +P
Sbjct: 780 LTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIP 823


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 121/267 (45%), Gaps = 20/267 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +       VV ++    
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPLLIPEL---QNYVVVAIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     G       I  P+++ +L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G +++ GSN +GQLG        H +   R T     PL        IA G ++   ++
Sbjct: 157 CGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPL------ATIACGGNHSFLIS 210

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +  V+ FG  +   LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+
Sbjct: 211 KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVF 268

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSL 372
           T G G  G LGHG   ++ LP  +  L
Sbjct: 269 TCGAGTYGQLGHGSNTNEMLPRMVMEL 295



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 117/251 (46%), Gaps = 13/251 (5%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            +F  G++  G LG G  E  Q +  ++I +   A + Q++    H  F+  +G+V+ CG
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP L+  L+      +  G   +  LT  G V + G N  GQL
Sbjct: 62  NNDQAQLGH---NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQL 118

Query: 249 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           G   D      PK I  L     VVQIA G ++ LA+T  G +YS+GS     LG  +  
Sbjct: 119 GQSTDQSIIELPKIIRSLVS-KHVVQIACGNNHSLALTSCGELYSWGSNIYGQLG-VKPP 176

Query: 308 DELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            EL     P  + T    GI +  ++ G  H   +  S  V+ +G+  CG LG  DE ++
Sbjct: 177 QELSHCNYPLRLTTLL--GIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNR 234

Query: 364 TLPEPLSSLKS 374
             P  L +L++
Sbjct: 235 AYPTQLKTLRT 245



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 15/260 (5%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H++ ++    V S G + CG LG   + +       I    + HVVQ++   NH
Sbjct: 91  IACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNH 150

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +  +   G++++ G N     G +        N P+   RL   L G+P   +  G N +
Sbjct: 151 SLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPL---RLT-TLLGIPLATIACGGNHS 206

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             ++    V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  G
Sbjct: 207 FLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNEG 265

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTW 347
            V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY +
Sbjct: 266 GVFTCGAGTYGQLGHGSNTNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYGF 323

Query: 348 GKGYCGALGHGDEIDKTLPE 367
           G G  G LG+      TLP+
Sbjct: 324 GLGSSGQLGNRSTNSVTLPQ 343



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG  P  E + C    R+       +  ++ 
Sbjct: 142 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIAC 201

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             NH+  + +S  VF  G N+    G  D +   + P  ++ L+ +  + V  G  F+ F
Sbjct: 202 GGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAY-PTQLKTLRTLGVRFVACGDEFSVF 260

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNG 288
           LT  G V TCG+ T+GQLGHG   +   P+ +  +E +GS + Q+A G  + LA V   G
Sbjct: 261 LTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRG 318

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAI 315
            VY FG GS+  LG+   +    P+ +
Sbjct: 319 RVYGFGLGSSGQLGNRSTNSVTLPQEV 345


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +H+L L S  +V + G +L G LG+G  TT   +   ++ P+   +  V+A   H
Sbjct: 146 IAAGAFHSLALTSAGTVLAWGENLHGQLGNG-GTTNMSTPVGVSLPAGVTITAVAAGAFH 204

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG---FL 231
           +  V  +G V   GDNS+   G+  T      P  V+   G     V AG+        L
Sbjct: 205 SLAVTSTGAVLAWGDNSNGQLGNGTTTGS-STPVDVDLPAGTTITAVAAGVAGAAHSLAL 263

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G     G+N  GQLG+GDT +R TP  +  L    ++  +AAG  + LA+T  G V 
Sbjct: 264 TSTGAALAWGNNADGQLGNGDTTNRSTPVDV-DLPAGVTITAVAAGGLHSLALTAAGAVV 322

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G   +  LG+G       P  +      G  +  ++AG +  +AL ++G V  WG+  
Sbjct: 323 AWGRNVSGQLGNGTTTGSSTP--VDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNV 380

Query: 352 CGALGHGDEIDKTLP 366
            G LG+GD I+++ P
Sbjct: 381 SGQLGNGDTINRSTP 395



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 96/205 (46%), Gaps = 5/205 (2%)

Query: 163 AHVVQVSASEN-HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           A  + ++A+EN  +A +  S   F  GDNS    G+  T      P  V    G     V
Sbjct: 36  AATMSLAAAENGPSAAIRASDTYFAWGDNSDGQLGNGTTTGS-STPVDVYLPAGTTITAV 94

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           TAG   +  LT  G V   G N  GQLG+GDT +R TP  +  L    ++  IAAG  + 
Sbjct: 95  TAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDV-DLPAGTTITAIAAGAFHS 153

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+T  G V ++G   +  LG+G   +   P  +      G+ +  V+AG  H +A+ S+
Sbjct: 154 LALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVS--LPAGVTITAVAAGAFHSLAVTST 211

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLP 366
           G V  WG    G LG+G     + P
Sbjct: 212 GAVLAWGDNSNGQLGNGTTTGSSTP 236



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 4/164 (2%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L L S  +  + G++  G LG+G +TT   +   ++ P+   +  V+A   H+  +  
Sbjct: 259 HSLALTSTGAALAWGNNADGQLGNG-DTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTA 317

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V   G N S   G+  T      P  V+   G     + AG +F   LT  G V   
Sbjct: 318 AGAVVAWGRNVSGQLGNGTTTGS-STPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAW 376

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           G N  GQLG+GDT++R TP  +  L    ++  +AAG  + +A+
Sbjct: 377 GRNVSGQLGNGDTINRSTPVDV-DLPAGVTITAVAAGGQHSMAL 419


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 18/272 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +  +++ G  +   G+LG+G + +  +            V  V+   
Sbjct: 294 VACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 353

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +  +GQ+FT GD +    GH D    I  PR V++L G+    V  G+  T  + 
Sbjct: 354 WHTALISSTGQLFTFGDGTFGVLGHGD-KXSISYPREVDSLTGLRTIAVACGVWHTAAVV 412

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +  L +  +  +IA G S  
Sbjct: 413 EVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSIT 471

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V++ GS     LG+    D  QP  ++  +  G     V+ G  HV+ L S 
Sbjct: 472 IGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTSK 529

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 530 NEVYTWGKGANGRLGHGDVEDRKSPTLVESLK 561



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 16/206 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 340
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 424

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
           SG ++TWG G    LGHGD+  +  P
Sbjct: 425 SGKLFTWGDGDKNRLGHGDKEPRLKP 450



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +HT LIS++  +F+ G    GVLGHG + +  +S+ R ++  +    + V+    
Sbjct: 349 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVW 406

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 407 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 465

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 466 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 522

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 523 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 578


>gi|408501717|ref|YP_006865636.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408466541|gb|AFU72070.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1828

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 15/245 (6%)

Query: 121  YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-AAHVVQVSASENHAAFVL 179
            Y   L S+ +V++ G++  G LG+G  TT   S   +   +  A +  +SA   +A  + 
Sbjct: 845  YSMALASDGTVYTWGNNGKGQLGNG--TTGSYSSEPVKAQTDNAKITAISAGRAYAMALA 902

Query: 180  QSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
              G V+T GDN+      G+ D++     P  V AL  +    ++AG      L  +GH 
Sbjct: 903  SDGTVYTWGDNTQGQLGIGNYDSHS---TPTKVTALSNITA--ISAGFTSGTALDSQGHA 957

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             T G N  GQLG+G     PTP  +  L+    +    + I+AG  ++LA+  +  +Y +
Sbjct: 958  WTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYIAISAGYQHVLALDTDHDLYGW 1017

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            GSG+           +    AI +F  + +++  +SAGD+   A+D SG +YTWGK   G
Sbjct: 1018 GSGTAIGSTTDTNVSKRGSTAI-SFGDEPVNITAISAGDDGSEAIDDSGKIYTWGKEAYG 1076

Query: 354  ALGHG 358
             LG+G
Sbjct: 1077 QLGNG 1081



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 12/204 (5%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGV 216
           P      QVSA  +H   V   G V+  GDNS    G   T   N P+ R    EA+KG 
Sbjct: 215 PRGVRFAQVSAGHDHTLAVGSDGHVYAWGDNSKGELGDSTTINKNTPV-RITENEAIKGK 273

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V+AG  F+  L   G V+T G N+ G+LG+G T +   P   A L    ++  I+A
Sbjct: 274 TFISVSAGTTFSMALASDGTVYTWGDNSRGELGNGSTTNSSVPVK-ANLNA--TITAISA 330

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           G  + +A++ +G +Y++G      LG+G    +    P A+ +    G+    +SAG + 
Sbjct: 331 GYWHAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSS---SGVTFTTISAGYDF 387

Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
             ALDS G+ Y WG+   G L  G
Sbjct: 388 QTALDSQGHAYAWGRNQGGQLSIG 411



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 11/243 (4%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
            Q + GRYHTL + S+  V++ G+   G LG+   +    +  RI    A      + VSA
Sbjct: 782  QASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIAVSA 841

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + ++  +   G V+T G+N     G+  T      P   +         ++AG  +   
Sbjct: 842  GDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSSEPVKAQ-TDNAKITAISAGRAYAMA 900

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            L   G V+T G NT GQLG G+     TP  +  L     +  I+AG +   A+   G  
Sbjct: 901  LASDGTVYTWGDNTQGQLGIGNYDSHSTPTKVTALSN---ITAISAGFTSGTALDSQGHA 957

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQ---TFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            +++G      LG+G  +    P  +Q   T +      + +SAG +HV+ALD+   +Y W
Sbjct: 958  WTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYIAISAGYQHVLALDTDHDLYGW 1017

Query: 348  GKG 350
            G G
Sbjct: 1018 GSG 1020



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 8/202 (3%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVE--ALKGV 216
           P A    Q SA   H   V   G V+  G+ +S   G+   +     P R+ E  A+KG 
Sbjct: 775 PRAVRFAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGK 834

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V+AG  ++  L   G V+T G+N  GQLG+G T    + + +    +   +  I+A
Sbjct: 835 IFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNG-TTGSYSSEPVKAQTDNAKITAISA 893

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G +Y +A+  +G VY++G  +   LG G       P  +        ++  +SAG     
Sbjct: 894 GRAYAMALASDGTVYTWGDNTQGQLGIGNYDSHSTPTKVTALS----NITAISAGFTSGT 949

Query: 337 ALDSSGYVYTWGKGYCGALGHG 358
           ALDS G+ +TWG+   G LG+G
Sbjct: 950 ALDSQGHAWTWGQNDKGQLGNG 971



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 10/216 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHRDTNR-PIFRPRLVEALKGVPCKQVT 222
             QVS  +NH+  V   G  +  GDNS+     G +D+++ P+   +  +A       QV+
Sbjct: 1329 AQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDFAYTQVS 1388

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGS---VVQIAAGP 278
            AG  F+  L   G+ +  G N  GQLG G       TP  +      G+     Q++AG 
Sbjct: 1389 AGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQVSAGG 1448

Query: 279  SYMLAVTGNGVVYSFGSGSNFC-LGHGEQH-DELQPRAIQ-TFRRKGIHVVRVSAGDEHV 335
             + LAV  +   Y++G  SN   +G G    +   P A+  +    G  V +VSAG +H 
Sbjct: 1449 YHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVSAGYQHS 1508

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            + +  SG  Y WG G  G LG+  +  +  P  +SS
Sbjct: 1509 LIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSS 1544



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 21/271 (7%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVS 169
            Q++TG+ H+L + S+ + ++ G +  G LG+G + +      ++  PS A       QVS
Sbjct: 1330 QVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPV-QVKKPSDAGTDFAYTQVS 1388

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK----QVTAGL 225
            A    +  +   G  +  GDN     G          P  V+   G        QV+AG 
Sbjct: 1389 AGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQVSAG- 1447

Query: 226  NFTGFLTIRGH-VHTCGSNTHG-QLGHGDTL-DRPTPKSI-APLEEVG-SVVQIAAGPSY 280
             +      + H  +  G  ++G Q+G G+T  + P P ++ A     G  V Q++AG  +
Sbjct: 1448 GYHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVSAGYQH 1507

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-----GIHVVRVSAGDEHV 335
             L +  +G  Y++G G +  LG+  +  +  P ++ +  +      G    +VSAG  H 
Sbjct: 1508 SLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSSPVKYEDGSIGFFATQVSAGGSHS 1567

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +A+   G  Y WG    G LG GD  D  +P
Sbjct: 1568 LAIGRDGKAYAWGANTDGRLGTGDTNDAAIP 1598



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 41/289 (14%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           +   L S+ +V++ G +  G LG+G  T   V   + N    A +  +SA   HA  +  
Sbjct: 284 FSMALASDGTVYTWGDNSRGELGNGSTTNSSVPV-KANL--NATITAISAGYWHAMALSS 340

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG ++T GDN     G+  T   +       +  GV    ++AG +F   L  +GH +  
Sbjct: 341 SGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTALDSQGHAYAW 400

Query: 241 GSNTHGQLGHGDTLDRP-------TPKSI------APLEEVGSVVQIAAGPSYMLAVTGN 287
           G N  GQL  G T+D         TP  I       P   V     I AG  ++LA++ +
Sbjct: 401 GRNQGGQLSIG-TMDGTSSGSNVYTPSRIYGDSTGNPDSTV--YTDIDAGYLHVLALSNS 457

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV-------VRVSAGDEHVVALDS 340
           G VY +G    + L  G   D+    ++ +F    + +       V  SAGD     +DS
Sbjct: 458 GKVYYWG----YPLTKG---DDPNADSVHSFYPSLVSLPTGAATPVSASAGDYSSAVVDS 510

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA-EVC 388
           +G +Y +G    G LG G     T P+   S  + +++ G++V A +VC
Sbjct: 511 AGSLYMFGSNSSGQLGDG----TTKPK---STMTEVSLTGVTVAAFDVC 552



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 18/257 (7%)

Query: 115  QITTGRYHTLLISNS-SVFSCGS-SLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVS 169
            Q++ G YH+L +      ++ G  S  G +G G  T    +   +N  + +    V QVS
Sbjct: 1443 QVSAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVS 1502

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRP-RLVEALKGVPCKQVTA 223
            A   H+  +  SGQ +  G   S   G+     + T   +  P +  +   G    QV+A
Sbjct: 1503 AGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSSPVKYEDGSIGFFATQVSA 1562

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS----VVQIAAGPS 279
            G + +  +   G  +  G+NT G+LG GDT D   P  +A   + GS      +I+AG  
Sbjct: 1563 GGSHSLAIGRDGKAYAWGANTDGRLGTGDTNDAAIPTLVA-NPDGGSDGFKPTEISAGGW 1621

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +   +   G +Y++GS  +  LG+      +    +     K     ++SAG+  V+ +D
Sbjct: 1622 FCAGIDDKGKIYTWGSNGHNALGNVSISGSISESPV--LVSKDGSTTQISAGERQVLVID 1679

Query: 340  SSGYVYTWGKGYCGALG 356
            S+   Y WG      LG
Sbjct: 1680 SNDMAYGWGDNSSRQLG 1696



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 13/177 (7%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAP 264
           +PR V         Q +AG   T  +   GHV+  G+   G LG+  ++    TP  I  
Sbjct: 774 KPRAVR------FAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITE 827

Query: 265 LEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRK 321
            + +   + IA  AG +Y +A+  +G VY++G+     LG+G       +P   QT   K
Sbjct: 828 NDAIKGKIFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSSEPVKAQTDNAK 887

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              +  +SAG  + +AL S G VYTWG    G LG G+    + P  +++L +  A+
Sbjct: 888 ---ITAISAGRAYAMALASDGTVYTWGDNTQGQLGIGNYDSHSTPTKVTALSNITAI 941



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           TL  P P+ +          Q++AG  + LAV  +G VY++G  S   LG     ++  P
Sbjct: 209 TLTPPKPRGV-------RFAQVSAGHDHTLAVGSDGHVYAWGDNSKGELGDSTTINKNTP 261

Query: 313 -RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            R  +    KG   + VSAG    +AL S G VYTWG    G LG+G   + ++P
Sbjct: 262 VRITENEAIKGKTFISVSAGTTFSMALASDGTVYTWGDNSRGELGNGSTTNSSVP 316



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 113/271 (41%), Gaps = 24/271 (8%)

Query: 102  HSSDIVETSAGNMQITT---GR-YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
            +SS+ V+    N +IT    GR Y   L S+ +V++ G +  G LG G   +     T  
Sbjct: 874  YSSEPVKAQTDNAKITAISAGRAYAMALASDGTVYTWGDNTQGQLGIGNYDSHS---TPT 930

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
               + +++  +SA       +   G  +T G N     G+   NR     R+ +   G P
Sbjct: 931  KVTALSNITAISAGFTSGTALDSQGHAWTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQP 990

Query: 218  CKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK----SIAPLEEVG 269
              +    ++AG      L     ++  GS T      G T D    K    +I+  +E  
Sbjct: 991  DTRFYIAISAGYQHVLALDTDHDLYGWGSGT----AIGSTTDTNVSKRGSTAISFGDEPV 1046

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVV 326
            ++  I+AG     A+  +G +Y++G  +   LG+G   +   ++ P+ I   +   +   
Sbjct: 1047 NITAISAGDDGSEAIDDSGKIYTWGKEAYGQLGNGVYDNTAWQINPKTITLAQS--VKAC 1104

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             VS    H  A+ S G +YTWG  Y   LG 
Sbjct: 1105 TVSTSSHHQTAIGSDGLLYTWGYSYYNQLGR 1135



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 16/118 (13%)

Query: 250 HGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           HGD       TL  P P+++          Q +AG  + LAV  +G VY++G+ ++  LG
Sbjct: 759 HGDDTGGSKITLTPPKPRAV-------RFAQASAGRYHTLAVGSDGHVYAWGNQASGGLG 811

Query: 303 HGEQHDELQP--RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
           + +         R  +    KG   + VSAGD + +AL S G VYTWG    G LG+G
Sbjct: 812 NSKNSGTATTPVRITENDAIKGKIFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNG 869



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 8/164 (4%)

Query: 214  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--- 270
            +G+   QV+ G N +  +   G+ +  G N+ GQLG+G      TP  +    + G+   
Sbjct: 1324 RGIRFAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDFA 1383

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHV--VR 327
              Q++AG  + LA+  +G  Y++G      LG G        P  ++     G      +
Sbjct: 1384 YTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQ 1443

Query: 328  VSAGDEHVVALDSSGYVYTWG-KGYCGALGHGDEIDKTLPEPLS 370
            VSAG  H +A+      Y WG +   G +G G+      P P++
Sbjct: 1444 VSAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGN-APAPVA 1486



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 38/268 (14%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PE--TTQCVSFTRINFPSAA 163
           I+ G +H + +S+S ++++ G +  G LG+G         P   ++  V+FT I   SA 
Sbjct: 328 ISAGYWHAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSGVTFTTI---SAG 384

Query: 164 HVVQVS-ASENHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQ 220
           +  Q +  S+ HA A+    G   + G       G       ++ P R+     G P   
Sbjct: 385 YDFQTALDSQGHAYAWGRNQGGQLSIGTMDGTSSGSN-----VYTPSRIYGDSTGNPDST 439

Query: 221 VTAGLNFTGFLTI-----RGHVHTCGSN-THGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           V   ++  G+L +      G V+  G   T G   + D++    P  ++      + V  
Sbjct: 440 VYTDID-AGYLHVLALSNSGKVYYWGYPLTKGDDPNADSVHSFYPSLVSLPTGAATPVSA 498

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-- 332
           +AG      V   G +Y FGS S+  LG G      +P++  T     +  V V+A D  
Sbjct: 499 SAGDYSSAVVDSAGSLYMFGSNSSGQLGDGT----TKPKS--TMTEVSLTGVTVAAFDVC 552

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDE 360
            H +A+ S G  Y+WG+   G LG G +
Sbjct: 553 RHSLAIGSDGLPYSWGEAKSGKLGQGSK 580



 Score = 38.1 bits (87), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 320  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++GI   +VS G  H +A+ S G  Y WG    G LG+G +     P
Sbjct: 1323 QRGIRFAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTP 1369


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 12/243 (4%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKKPEHVVALD---AQIIVAVSCGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  S+   G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQV 158

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG  +  D   P  +++ R +   V+ VS G++H  AL     V+T+G G  G 
Sbjct: 216 KNKFGQLGLNDTKDRWFPALLKSLRSQ--RVIFVSCGEDHTAALTKLRGVFTFGAGGYGQ 273

Query: 355 LGH 357
           LGH
Sbjct: 274 LGH 276



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G + T  L  +G V + G  ++GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ IQ+   +GI   ++SAG  H  A+  SG V+ WGK   G LG  D  D+  P  L S
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKS 238

Query: 372 LKSHLAV 378
           L+S   +
Sbjct: 239 LRSQRVI 245



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 6/218 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   VFS G    G LG      +CV   R I   S   + QV+    
Sbjct: 89  VSCGESHTLALNDKGQVFSWGLGSNGQLGLN-NFEECVRVPRNIKCLSDVQIAQVACGYW 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ G N     G       I  P+++++L+G+P  Q++AG   +  +T+
Sbjct: 148 HSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  DT DR  P  +  L     V+ ++ G  +  A+T    V++F
Sbjct: 208 SGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRS-QRVIFVSCGEDHTAALTKLRGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           G+G    LGH   + E+ PR +  F   G  V ++S G
Sbjct: 267 GAGGYGQLGHNCTNHEINPRKV--FELMGNVVTQISCG 302


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 3/169 (1%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           RP+LVE L G+    +  G   +  +T  GHV T G   +G+LGHGD+ D+  PK +  L
Sbjct: 9   RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEAL 68

Query: 266 EEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
               ++ +   +G +  L +T +  V+S+G G    LG G       P  I++    G+ 
Sbjct: 69  LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLG 126

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           VV+V  G +  VAL  SG VYTWGKG    LGHG       P+ +++L+
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 175



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 6/217 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G
Sbjct: 21  VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACG 79

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                 L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +
Sbjct: 80  SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSV 138

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG
Sbjct: 139 ALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSG 196

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            VYTWG    G LG G       P  +++L+    V+
Sbjct: 197 EVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVK 233



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 6/229 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASE 172
            I  G  H+  I+ S  V + G    G LGHG    Q             A  +   + +
Sbjct: 23  DIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGD 82

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                +     V++ GD      G R  +     P  +E+L G+   +V  G  F+  LT
Sbjct: 83  AQTLCITDDDNVWSWGDGDYGKLG-RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALT 141

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V+T G     +LGHG       PK +A L+    ++ IA G  + +A + +G VY+
Sbjct: 142 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVYT 200

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +G      LG G       PR +     +G H+V+V+ G  H +AL +S
Sbjct: 201 WGDNDEGQLGDGTVTAIQWPRLVTAL--QGKHIVKVTCGSAHTLALSTS 247



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%)

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+  D+
Sbjct: 1   HGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP  +
Sbjct: 60  LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 119

Query: 370 SSL 372
            SL
Sbjct: 120 ESL 122


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 119/230 (51%), Gaps = 11/230 (4%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N+    G   T      P++VE L GVP  Q++A
Sbjct: 83  NIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISA 142

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++  +V++ G N  GQLG G T ++ +P  I  L+    V  +A G S+   
Sbjct: 143 GEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDN-QEVEFLACGGSHTAL 201

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-G 342
           +T +G+V++FG+G    LGH    +EL P  +      G  V +++ G  H +A  S  G
Sbjct: 202 LTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTEL--VGKRVTQIACGRRHTLAYVSDLG 259

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
            V+++G G  G LG+G    + +P P+          +SH + + L ++A
Sbjct: 260 KVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELKFESHTSEKELIMIA 309



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 107/222 (48%), Gaps = 7/222 (3%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    V      +QIT G YH+L +S    +F+ G +  G LG G       +   
Sbjct: 69  SIEHARFQCVLQEKNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQI 128

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   +VQ+SA E H+  +  S  V++ G N     G   TN     P L+EAL   
Sbjct: 129 VEHLSGVPLVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKD-SPSLIEALDNQ 187

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA 275
             + +  G + T  LT  G V T G+   GQLGH  T +  TP  +  L  VG  V QIA
Sbjct: 188 EVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTEL--VGKRVTQIA 245

Query: 276 AGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            G  + LA V+  G V+SFGSG    LG+G  H +L P  ++
Sbjct: 246 CGRRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMK 287


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 4/207 (1%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q
Sbjct: 9   SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 68

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +
Sbjct: 69  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDH 127

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-D 339
             A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A   
Sbjct: 128 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVP 185

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG +Y++G G  G LG G   ++  P
Sbjct: 186 SSGRIYSFGLGGNGQLGTGSTSNRKSP 212



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 14  VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 73

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 74  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 132

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 133 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 190

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 191 YSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 4/173 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLE 266
           R +++L  +   QV  G   +  L+    V   G N +GQLG G D   + +P+ I  L 
Sbjct: 3   RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 62

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +   +Q+AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I  V
Sbjct: 63  GI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--V 119

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +  G++H  AL   G V+T+G G  G LGH     +  P  +  L   +  Q
Sbjct: 120 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 172


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 23/268 (8%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAA 163
           G +Q  +G  H LL+ +N  V +CG +  G LG         PE  Q +    +N P   
Sbjct: 30  GLLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQAL----VNLP--- 82

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  VS  + H+  V   G+VF  G  S    G        F P+ ++AL G+   Q++ 
Sbjct: 83  -VDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISC 141

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G   +  L+  G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  
Sbjct: 142 GYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGI-PLAQVAAGGAHSF 200

Query: 283 AVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           A++ +G  + +G+ S   L   G+       +PR++   +  G  VV +S G EH   L 
Sbjct: 201 ALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLG--VVYISCGYEHTAVLT 258

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            +  V+T+G    G LGH      T P+
Sbjct: 259 QNDQVFTFGDNSFGQLGHNGVSQTTGPQ 286



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 13/238 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G    G LG G     C    +I   +   ++Q+S    H
Sbjct: 86  VSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYH 145

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L++ 
Sbjct: 146 SLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS 205

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     G+N+ GQL   G+   +    P+S+  L+ +G VV I+ G  +   +T N  V+
Sbjct: 206 GTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLG-VVYISCGYEHTAVLTQNDQVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +FG  S   LGH        P+ ++     G  V ++  G  H +A     YVYT G+
Sbjct: 265 TFGDNSFGQLGHNGVSQTTGPQLVEGI---GGPVSQIDCGSYHTLA-----YVYTTGQ 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 137 IQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGG 196

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G+NS+        N  +  ++PR V ALK +    ++ G   T  
Sbjct: 197 AHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAV 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT    V T G N+ GQLGH        P+ +  +   G V QI  G  + LA V   G 
Sbjct: 257 LTQNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEGIG--GPVSQIDCGSYHTLAYVYTTGQ 314

Query: 290 VYSFG 294
           V SFG
Sbjct: 315 VVSFG 319



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 5/156 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q  +G      L     VH CG N+ GQLG         P+ I  L  +  V  ++ G  
Sbjct: 33  QAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNL-PVDLVSCGKE 91

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LAV   G V+++G GS+  LG G+  +    P+ I+     GI ++++S G  H +AL
Sbjct: 92  HSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKAL--TGIKIIQISCGYYHSLAL 149

Query: 339 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLK 373
              G V++WGK   G LG G E   +  P+ + SL+
Sbjct: 150 SKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLE 185


>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
          Length = 947

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 4/207 (1%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q
Sbjct: 25  SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 84

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +
Sbjct: 85  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDH 143

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LD 339
             A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + 
Sbjct: 144 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVP 201

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG +Y++G G  G LG G   ++  P
Sbjct: 202 SSGRIYSFGLGGNGQLGTGSTSNRKSP 228



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 30  VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 89

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 90  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 148

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 149 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 206

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 207 YSFGLGGNGQLGTGSTSNRKSPFTVK 232



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAP 264
           R R +++L  +   QV  G   +  L+    V   G N +GQLG G D   + +P+ +  
Sbjct: 17  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS 76

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +   +Q+AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I 
Sbjct: 77  LLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI- 134

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 135 -VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 166



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTF 318
           ++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  P+ +++ 
Sbjct: 19  RNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 77

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 78  L--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 135


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 126/271 (46%), Gaps = 18/271 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L + S+ +V++ GS+  G LG G  + +      +     + VV VS
Sbjct: 334 SGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRS---EPVQVQGLSGVVAVS 390

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  + +  +   G V+  G N+S   G   T   +  P  V+ L GV    V AG +F+ 
Sbjct: 391 AGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLV-PVQVQGLSGVVA--VVAGTSFS- 446

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +R  G V   G N +GQLG   +L    P  +  L     VV +AAG  + LAV  +
Sbjct: 447 -LAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLS---GVVAVAAGNLHSLAVRSD 502

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V++ G   N  LG G   +   P  +Q     G  VV V+AGD H +A+   G V+ W
Sbjct: 503 GTVWALGRNDNGQLGDGSWTNRSAP--VQVTGLSG--VVSVAAGDSHSLAVRYDGSVWAW 558

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G    G LG G    ++ P  ++ L    +V
Sbjct: 559 GYNSFGQLGDGSWFQRSAPVQVTGLSGRGSV 589



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 122/266 (45%), Gaps = 16/266 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L L S+ +V++ G++  G LG G  T + V    +     + VV + A  
Sbjct: 189 VAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVL-----SGVVAMEAGS 243

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            ++  V   G V+  G N S   G  DT      P  V  L  V    V AG + +  L 
Sbjct: 244 GYSLAVRNDGTVWAWGYNFSGQLGD-DTVTSRSTPVQVLGLSEVVA--VAAGSSLSLALR 300

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   GSN +GQ G G T +R  P     L      V +AAG ++ LAV  +G V++
Sbjct: 301 SDGTVWAWGSNDYGQRGEGTTSNRAFPVQARGLS---GGVAVAAGYAHSLAVRSDGTVWA 357

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS ++  LG G   +  +P  +Q        VV VSAG    +A+ S G V+ WG    
Sbjct: 358 WGSNASGQLGEGTTSNRSEPVQVQGLS----GVVAVSAGASSSLAIRSDGTVWAWGSNAS 413

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAV 378
           G LG G   D+ +P  +  L   +AV
Sbjct: 414 GQLGDGTTTDRLVPVQVQGLSGVVAV 439



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 18/259 (6%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G++  G LG G    +    T +     + VV  +A   H+  +   G V+  
Sbjct: 4   DGTVWAAGNNGSGQLGDGTRDNRS---TPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAW 60

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTH 245
           G N     G+         P  V+ L G     V AG   +  L +R  G V   G N +
Sbjct: 61  GYNGYGQLGNGSLGSRA-EPVQVQGLSG--GVSVDAGHYHS--LAVRDDGTVWAWGDNPN 115

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLG G T  R  P  +  L EV   V + AG S+ LA+  +G V+++G+ ++  LG G 
Sbjct: 116 GQLGEGTTTRRLVPVQVQGLSEV---VAVTAGSSHSLALRSDGTVWAWGANASGQLGEGT 172

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             + L P  +         VV V AG  H +AL S G V+ WG    G LG G    + +
Sbjct: 173 TTNRLVPVPVLGLS----EVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLV 228

Query: 366 P-EPLSSLKSHLAVQGLSV 383
           P + LS + +  A  G S+
Sbjct: 229 PVQVLSGVVAMEAGSGYSL 247



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 113/261 (43%), Gaps = 17/261 (6%)

Query: 107 VETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G   +L + N  +V+  G +  G LG     T       +     + V
Sbjct: 430 VQGLSGVVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLG---TFTSLFVLVPVQVTGLSGV 486

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAG 224
           V V+A   H+  V   G V+  G N +   G    TNR    P  V  L GV    V AG
Sbjct: 487 VAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA--PVQVTGLSGVVS--VAAG 542

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  +   G V   G N+ GQLG G    R  P  +  L   GSV   AA   Y +AV
Sbjct: 543 DSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRGSV---AASSDYSMAV 599

Query: 285 TGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
             +G V+++G      LG G    ++L P  +Q  R     VV V  G  H +AL S G 
Sbjct: 600 RYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLR----GVVAVEVGSSHSLALRSDGT 655

Query: 344 VYTWGKGYCGALGHGDEIDKT 364
           V+TWG    G LG+G  +  T
Sbjct: 656 VWTWGYNSFGQLGNGPPLYAT 676


>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
          Length = 953

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 4/207 (1%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q
Sbjct: 31  SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 90

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +
Sbjct: 91  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDH 149

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LD 339
             A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + 
Sbjct: 150 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVP 207

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG +Y++G G  G LG G   ++  P
Sbjct: 208 SSGRIYSFGLGGNGQLGTGSTSNRKSP 234



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 36  VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 95

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 96  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 154

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 155 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 212

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 213 YSFGLGGNGQLGTGSTSNRKSPFTVK 238



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAP 264
           R R +++L  +   QV  G   +  L+    V   G N +GQLG G D   + +P+ +  
Sbjct: 23  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS 82

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +   +Q+AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I 
Sbjct: 83  LLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI- 140

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            V +  G++H  AL   G V+T+G G  G LGH
Sbjct: 141 -VYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 172



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           F   + +   V  C   ++G++           ++I  L ++  +VQ+A G  + LA++ 
Sbjct: 3   FPKIMCVDSLVRICSGLSYGRI-----------RNIKSLSDI-QIVQVACGYYHSLALSK 50

Query: 287 NGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
              V+ +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++
Sbjct: 51  ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIF 108

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG+   G LG  DE D+ +P  L SL+S   V
Sbjct: 109 GWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 141


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 122/278 (43%), Gaps = 24/278 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           ++S+  V + G +  G LG+G  T Q    + +   + + +  VS  + H   +   G V
Sbjct: 156 VLSDGKVLTWGYNAYGQLGNGSTTDQS---SPVEVSALSDIKGVSVGKYHMLALRSGGTV 212

Query: 185 FTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +  G N S   G     N     P+    LKGV    V+AG + +  L   G V   G N
Sbjct: 213 WAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGV--ASVSAGDSHSLALRWDGTVWAWGQN 270

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G   DRP+P  +  L     VV++AAG  + LA+  +G V+++G   +  LG 
Sbjct: 271 NQGQLGIGSFTDRPSPVQVPRLT---GVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGD 327

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       P  +         VV V+AGD H VA+ S G VYTWG+   G LG G +   
Sbjct: 328 GTTLSRSSPVQVPGL----TGVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQ--D 381

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPTIVQEDTRSCSD 401
            LP P           G ++L  VC     E    C D
Sbjct: 382 ALPHP---------TPGQALLPFVCGNHRLEPEEQCDD 410



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 22/255 (8%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHG---PETTQCVSFTR-INFPSAAHVVQVSASENHAA 176
           H+L++ SN  V + G +  G +G G     T  C S T   N  S   ++ V+A +NH+ 
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFS---ILGVAAGQNHSL 631

Query: 177 FVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +   G V+  G N+S   G     D  RP+   RL   +       V AGL  +  L  
Sbjct: 632 ALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVS------VVAGLYHSLALRS 685

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG G    +  P  +  L     VV +AAG  + LA+  +G V+++
Sbjct: 686 DGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLS---GVVAVAAGGRHSLALRADGTVWAW 742

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G  SN  +G G     + +P  ++        V+ V+AGD H VA+ S G V TWG+   
Sbjct: 743 GYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDS 802

Query: 353 GALGHG-DEIDKTLP 366
           G LG+  +  D++ P
Sbjct: 803 GQLGYATNNTDRSTP 817



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 8/249 (3%)

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  +TL+   + SV++ G++  G LG G    +  S   ++F +   V +V+A  +HA  
Sbjct: 45  GEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLAS-APVDFSNGMVVKRVAAGGSHALA 103

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           VL    ++  G N     G   T    F P  V    GV    + A    +  +   G V
Sbjct: 104 VLSDKTLWAWGRNGDGQLGVGSTTSS-FSPVKVPGRTGVEVVAMAASTFNSAAVLSDGKV 162

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            T G N +GQLG+G T D+ +P  ++ L ++  V   + G  +MLA+   G V+++G   
Sbjct: 163 LTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGV---SVGKYHMLALRSGGTVWAWGFNG 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +  LG G   +       Q    KG  V  VSAGD H +AL   G V+ WG+   G LG 
Sbjct: 220 SGQLGLGSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALRWDGTVWAWGQNNQGQLGI 277

Query: 358 GDEIDKTLP 366
           G   D+  P
Sbjct: 278 GSFTDRPSP 286



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 120/268 (44%), Gaps = 21/268 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G +H+L L S+  ++S GS+    LG   +T    +   +     + VV V+A E 
Sbjct: 516 NVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVS-GVSGVVAVAAGET 574

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF------RPRLVEALKGVPCKQVTAGLNF 227
           H+  VL +G+V   G N     G   +  P F       P  + ++ GV      AG N 
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILGV-----AAGQNH 629

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G V   G N  GQLG G  +DR  P  +A L  V SVV   AG  + LA+  +
Sbjct: 630 SLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVSVV---AGLYHSLALRSD 686

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G   +  LG G    ++ P  +         VV V+AG  H +AL + G V+ W
Sbjct: 687 GTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLS----GVVAVAAGGRHSLALRADGTVWAW 742

Query: 348 GKGYCGALGHGDEIDKTL-PEPLSSLKS 374
           G    G +G G +      P P+  L S
Sbjct: 743 GYNSNGQIGDGSDASIIYRPSPVKVLFS 770



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 14/269 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G   TL   N   +++ G +  G LG    T   ++   ++  S   V  V+A   
Sbjct: 464 RLVAGAKFTLFQKNDGKLWAWGHNFSGQLGD-DSTVNRLTPVSVSTASLTDVKNVAAGGF 522

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G++++ G NS    G    +R     R   AL       V      T  L +
Sbjct: 523 HSLALGSDGKLWSWGSNSLSQLG---VSRDTLGSRASPALVSGVSGVVAVAAGETHSLVV 579

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 289
              G V   G N +GQ+G G +   PT    +P E     S++ +AAG ++ LA+  +G 
Sbjct: 580 LSNGKVSAWGYNGYGQIGDGCS-PVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  ++  LG G   D  +P  +    R    VV V AG  H +AL S G V+ WG 
Sbjct: 639 VWAWGRNNSGQLGDGSLVDRTRPVQVARLNR----VVSVVAGLYHSLALRSDGTVWAWGD 694

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G LG G    + LP  +  L   +AV
Sbjct: 695 NGSGQLGDGTYFGQMLPVQVPGLSGVVAV 723



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 10/166 (6%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ-IAAG 277
           +  AG  +T      G V T G+N+ GQLG G T  R    + AP++   G VV+ +AAG
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYR---LASAPVDFSNGMVVKRVAAG 97

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ LAV  +  ++++G   +  LG G       P  ++   R G+ VV ++A   +  A
Sbjct: 98  GSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNSAA 155

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           + S G V TWG    G LG+G   D++ P  +S+L     ++G+SV
Sbjct: 156 VLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSD---IKGVSV 198



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 93/245 (37%), Gaps = 76/245 (31%)

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           GD  SF C        +  PRLV            AG  FT F    G +   G N  GQ
Sbjct: 451 GDGCSFVC-------RLETPRLV------------AGAKFTLFQKNDGKLWAWGHNFSGQ 491

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY---------------S 292
           LG   T++R TP S++    +  V  +AAG  + LA+  +G ++               +
Sbjct: 492 LGDDSTVNRLTPVSVS-TASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDT 550

Query: 293 FGSGSNFCL--------------------------------GHGEQHDELQPRAIQTFR- 319
            GS ++  L                                G+G+  D   P  + TF  
Sbjct: 551 LGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSP--VPTFYC 608

Query: 320 ------RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
                      ++ V+AG  H +AL S G V+ WG+   G LG G  +D+T P  ++ L 
Sbjct: 609 SSPTEPTNLFSILGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLN 668

Query: 374 SHLAV 378
             ++V
Sbjct: 669 RVVSV 673


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 230
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 542

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 574



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 429 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSL 469



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 535

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 589

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 4/193 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFL-ALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 360 EIDKTLPEPLSSL 372
               + P+ + SL
Sbjct: 395 RESVSYPKEVQSL 407



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-- 149
           + ++   S+ H++ IVE      Q  T       +S+  +F+ G      LGHG + T  
Sbjct: 411 KTVKVACSIWHTAAIVEVMG---QTATS------MSSRKLFTWGDGDKNRLGHGNKETYL 461

Query: 150 --QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
              CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  +
Sbjct: 462 LPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGKL 513

Query: 205 FRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P LV+  L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  + 
Sbjct: 514 --PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVE 571

Query: 264 PLEE 267
            L +
Sbjct: 572 ALRD 575


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)

Query: 157 INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           ++F S +  +V +SA   ++A V  +G V+T G N     G  D       PR++ +L  
Sbjct: 223 VDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYH-GNPRVIRSLSN 281

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQI 274
                +  G      ++  G ++T G    GQLGHG       PK +   E+    +VQ+
Sbjct: 282 KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQV 341

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLG------------HGEQHDELQ---PRAIQTFR 319
           A G ++ +AV+ NG ++SFG G    LG            +G++ D L+   P+ ++   
Sbjct: 342 ATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKAL- 400

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            + + V +V+ G  H +A+ +   VYTWG G  G LG GD   + +P+ + SL
Sbjct: 401 -ESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSL 452



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 17/184 (9%)

Query: 207 PRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+   K +    ++AG  ++  +T  G+V+T G N  GQLG GD      P+ I  L
Sbjct: 220 PVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSL 279

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
               S+V IA G  +M A++ +G +Y++G G    LGHG+    L P+ +  F ++   +
Sbjct: 280 SN-KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKI 338

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG---------------HGDEIDKTLPEPLS 370
           V+V+ G    +A+  +G ++++G G  G LG                 D +  +LP+ + 
Sbjct: 339 VQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVK 398

Query: 371 SLKS 374
           +L+S
Sbjct: 399 ALES 402



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 28/256 (10%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           S  IV+ SAG        Y   + S  +V++ G +  G LG G           I   S 
Sbjct: 229 SIKIVDISAG------WAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRV-IRSLSN 281

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--Q 220
             +V ++    H A + +SG ++T G       GH    + +  P+ V   +    K  Q
Sbjct: 282 KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKL-KSLLHPKKVLYFEQQQKKIVQ 340

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLG---------------HGDTLDRPTPKSIAPL 265
           V  G NFT  ++  G + + G   +GQLG                 D L    PK +  L
Sbjct: 341 VATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKAL 400

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E V  V ++A G  + +AVT +  VY++G GS+ CLG G++  +L P+ + +    G  +
Sbjct: 401 ESV-KVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSL--SGEEI 457

Query: 326 VRVSAGDEHVVALDSS 341
             VS G++H + + SS
Sbjct: 458 SSVSGGEKHTLIVRSS 473



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 3/113 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    GQLG     D+  P  I  L+    + QIA G ++ LAVT  G VYS+G G
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKG-KRIKQIACGEAHSLAVTEFGDVYSWGRG 61

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               LGH ++     P  I+    +   +V+V+ G+ H +AL  +G VY WG+
Sbjct: 62  KEGELGHPQKAMTAPPALIKALEHE--RIVKVACGNYHSLALTDTGKVYQWGQ 112



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           D N+    P +++ LKG   KQ+  G   +  +T  G V++ G    G+LGH        
Sbjct: 17  DVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAP 76

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           P  I  LE    +V++A G  + LA+T  G VY +G
Sbjct: 77  PALIKALEH-ERIVKVACGNYHSLALTDTGKVYQWG 111



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V SFG G    LG     D+L P  IQ    KG  + +++ G+ H +A+   G VY+WG+
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLL--KGKRIKQIACGEAHSLAVTEFGDVYSWGR 60

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LGH  +     P  + +L+    V+
Sbjct: 61  GKEGELGHPQKAMTAPPALIKALEHERIVK 90


>gi|442319025|ref|YP_007359046.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486667|gb|AGC43362.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 746

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 120/266 (45%), Gaps = 15/266 (5%)

Query: 109 TSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           TS   ++   G Y     ++ S++  G +  G LG G  T++   ++ I  P  + V  V
Sbjct: 96  TSVTAVEAGRGNYSMARRADGSLWVWGYNTYGQLGDGTTTSR---WSPIPVPGFSGVSSV 152

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S    H+  +   G V+  G N+    G   T +   R   V AL       V+AG +F+
Sbjct: 153 SGGYMHSMALKSDGTVWAWGRNADGQLGDGSTTQ---RLSPVRALGLSLVTSVSAGYDFS 209

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V T G NT G+LG+G   DR TP  +  L     VV + AG S+++AV  +G
Sbjct: 210 AALKADGTVWTWGDNTDGELGNGTLTDRLTPAQVPGLT---GVVFLMAGHSHVMAVKSDG 266

Query: 289 VVYSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            V+ +G      LG GE     +L P  +    +    V  V +G+ + VAL + G ++ 
Sbjct: 267 TVWVWGRNDWGVLGLGEGAPIRQLTPTQVPGISQ----VAFVDSGEHYTVALKTDGTLWG 322

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL 372
           WG    G LG G    K LP  L  L
Sbjct: 323 WGYNNYGQLGEGTGGVKYLPTQLPGL 348



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 114/256 (44%), Gaps = 13/256 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G ++   G Y TL++ ++ +V+  G +  G LG G  T + V    +    A   V V++
Sbjct: 399 GALRPVGGLYETLVLKADGTVWGAGRNGSGQLGDGSGTQRVVPAQAVGLTGA---VSVAS 455

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             NHA      G V+  G N S   G   T   +  P  V  L GV    V AG  F+  
Sbjct: 456 GANHALAAKSDGTVWAWGGNGSGQLGDGSTTASLI-PIQVPGLTGVAA--VAAGDGFSLA 512

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G +   G N+ G LG G T  R TP  +     V   V  A G  ++LA+  NG +
Sbjct: 513 LKSDGTLWAWGRNSSGSLGDGTTTGRTTPALVPNFTGV-KAVATAPGADHVLALKTNGTL 571

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  S   LG G    +L P  +         V+ ++ G +H + + + G V+TWG+ 
Sbjct: 572 WAWGGNSYGQLGDGSVLRKLSPVFVNL-----TGVLSIATGSDHSLVVRTGGAVWTWGRN 626

Query: 351 YCGALGHGDEIDKTLP 366
               LG G    +TLP
Sbjct: 627 DAAQLGDGTGTTRTLP 642



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 13/256 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + + +G  H L   S+ +V++ G +  G LG G  T    S   I  P    V  V+A
Sbjct: 449 GAVSVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTT---ASLIPIQVPGLTGVAAVAA 505

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            +  +  +   G ++  G NSS       T      P LV    GV       G +    
Sbjct: 506 GDGFSLALKSDGTLWAWGRNSSGSL-GDGTTTGRTTPALVPNFTGVKAVATAPGADHVLA 564

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G +   G N++GQLG G  L + +P  +     +  V+ IA G  + L V   G V
Sbjct: 565 LKTNGTLWAWGGNSYGQLGDGSVLRKLSPVFV----NLTGVLSIATGSDHSLVVRTGGAV 620

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G      LG G       P  +Q           ++AGD H + L S G ++ WG  
Sbjct: 621 WTWGRNDAAQLGDGTGTTRTLPVQVQGV----TGATALAAGDRHSLMLRSDGTLWAWGSN 676

Query: 351 YCGALGHGDEIDKTLP 366
             G LG G    + LP
Sbjct: 677 SEGELGDGTMTGRPLP 692



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G ++T+ L ++ +++  G +  G LG G   T  V +     P    V  +     H
Sbjct: 304 VDSGEHYTVALKTDGTLWGWGYNNYGQLGEG---TGGVKYLPTQLPGLTQVATLGVGRYH 360

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  + Q G  +  G + ++   + +  RP     +     G    +   GL  T  L   
Sbjct: 361 AMAIKQDGTAWAWGLHDAYQ--YANVTRPDSAVAVATQFTG--ALRPVGGLYETLVLKAD 416

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYS 292
           G V   G N  GQLG G    R     + P + VG    V +A+G ++ LA   +G V++
Sbjct: 417 GTVWGAGRNGSGQLGDGSGTQR-----VVPAQAVGLTGAVSVASGANHALAAKSDGTVWA 471

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G     L P  IQ     G  V  V+AGD   +AL S G ++ WG+   
Sbjct: 472 WGGNGSGQLGDGSTTASLIP--IQVPGLTG--VAAVAAGDGFSLALKSDGTLWAWGRNSS 527

Query: 353 GAL 355
           G+L
Sbjct: 528 GSL 530



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 6/137 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           +L   G V + G+N  G+LG G    R TP  +  L  V + V+   G +Y +A   +G 
Sbjct: 60  WLKPDGTVWSWGTNYGGELGDGTHNHRSTPAQVPNLTSV-TAVEAGRG-NYSMARRADGS 117

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++ +G  +   LG G       P  +  F      V  VS G  H +AL S G V+ WG+
Sbjct: 118 LWVWGYNTYGQLGDGTTTSRWSPIPVPGFS----GVSSVSGGYMHSMALKSDGTVWAWGR 173

Query: 350 GYCGALGHGDEIDKTLP 366
              G LG G    +  P
Sbjct: 174 NADGQLGDGSTTQRLSP 190



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 106/306 (34%), Gaps = 58/306 (18%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           +   L ++ +V++ G +  G LG+G  T +    T    P    VV + A  +H   V  
Sbjct: 208 FSAALKADGTVWTWGDNTDGELGNGTLTDR---LTPAQVPGLTGVVFLMAGHSHVMAVKS 264

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            G V+  G N     G  +   PI    P  V  +  V    V +G ++T  L   G + 
Sbjct: 265 DGTVWVWGRNDWGVLGLGE-GAPIRQLTPTQVPGISQVAF--VDSGEHYTVALKTDGTLW 321

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----------------------------- 269
             G N +GQLG G    +  P  +  L +V                              
Sbjct: 322 GWGYNNYGQLGEGTGGVKYLPTQLPGLTQVATLGVGRYHAMAIKQDGTAWAWGLHDAYQY 381

Query: 270 -------SVVQIA----------AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
                  S V +A           G    L +  +G V+  G   +  LG G     + P
Sbjct: 382 ANVTRPDSAVAVATQFTGALRPVGGLYETLVLKADGTVWGAGRNGSGQLGDGSGTQRVVP 441

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
              Q     G   V V++G  H +A  S G V+ WG    G LG G      +P  +  L
Sbjct: 442 --AQAVGLTG--AVSVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTTASLIPIQVPGL 497

Query: 373 KSHLAV 378
               AV
Sbjct: 498 TGVAAV 503


>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
 gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
          Length = 364

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 128/280 (45%), Gaps = 21/280 (7%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  HTL++  N  V+ CG +  G LG   +T   +  T+I       +VQ+S   
Sbjct: 42  VAIAGGAGHTLILDKNGFVYCCGWNSKGQLGTSDDT---LKITQIEILKGFRIVQISCGW 98

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTAGLNFTGF 230
           + +A V + G+ F  G+NS    G   +      P  ++  + +    KQV+ GL  +  
Sbjct: 99  DFSAAVSECGKQFVWGNNSYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAM 158

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G +   G+ + GQLG GD  D     SI+ + ++  +V IA+G  + + +  +G V
Sbjct: 159 LNKDGGLLVAGTGSKGQLGLGDNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTV 218

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI----HVVRVSAGDEHVVALDSSGYVYT 346
           YS+G      LG       + P    +F    I    ++  V AG  H  AL  SG V+T
Sbjct: 219 YSWGENKYGQLG-------IDPNISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFT 271

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAE 386
           WG+   G LG   E+    PE +  LK    V  LSV +E
Sbjct: 272 WGRNSYGQLGAQREVTYK-PEKIPGLKD---VTQLSVGSE 307



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 9/151 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I +G++HT+++  + +V+S G +  G LG  P  +   SF  +     A++  V A  
Sbjct: 200 VSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNISN--SFVPMEILHDANLGSVYAGW 257

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A + +SG+VFT G NS    G     R + ++P  +  LK V   Q++ G      +
Sbjct: 258 THTAALSKSGEVFTWGRNSY---GQLGAQREVTYKPEKIPGLKDVT--QLSVGSEHNLAV 312

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           T  G +   G N HG  G GD  D   P  I
Sbjct: 313 TKDGKLFVWGWNEHGSCGTGDKTDVCKPTQI 343



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)

Query: 237 VHTCGSNTHGQLGHGDTLDR---PTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
           +++ G+N++GQLG G   D    P   ++   + V  ++V IA G  + L +  NG VY 
Sbjct: 3   LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYC 62

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G  S   LG  +  D L+   I+    KG  +V++S G +   A+   G  + WG    
Sbjct: 63  CGWNSKGQLGTSD--DTLKITQIEIL--KGFRIVQISCGWDFSAAVSECGKQFVWGNNSY 118

Query: 353 GALG 356
             LG
Sbjct: 119 TQLG 122


>gi|157137551|ref|XP_001664004.1| Bj1 protein, putative [Aedes aegypti]
 gi|108869687|gb|EAT33912.1| AAEL013819-PA [Aedes aegypti]
          Length = 484

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 100/240 (41%), Gaps = 30/240 (12%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +    +    G N     G  D  R   +P  V  LK V   Q   G N T FLT 
Sbjct: 126 HSVLITMDRKALAFGRNQHGQLGQSDL-RTFEKPTPVNGLKDVKVVQAACGRNHTLFLTD 184

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
            G V+ CG N HGQ G G T   PT      L+  G  +V++A G  + + +  NG +YS
Sbjct: 185 NGVVYACGDNRHGQCGVGHT--NPTVLKATRLKYTGPPIVKVACGAEFSMILDINGRLYS 242

Query: 293 FGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK----------GIHVVRVSA 330
           FG   +  LGH               H E  PR I T+  K           + ++  + 
Sbjct: 243 FGLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDVQILDFAC 302

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPT 390
           G+ H VA+DS    ++WG G  G LGH    D+ +P     L  +  +Q   VL   C T
Sbjct: 303 GNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPR----LNKYFDIQKRKVLRVFCGT 358



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 34/276 (12%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI+ +    + G +  G LG   +       T +N      VVQ +   NH  F+  
Sbjct: 126 HSVLITMDRKALAFGRNQHGQLGQS-DLRTFEKPTPVNGLKDVKVVQAACGRNHTLFLTD 184

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN    CG   TN  + +   ++   G P  +V  G  F+  L I G +++ 
Sbjct: 185 NGVVYACGDNRHGQCGVGHTNPTVLKATRLK-YTGPPIVKVACGAEFSMILDINGRLYSF 243

Query: 241 GSNTHGQLGHGD------TLDR------PTPKSIA------------PLEEVGSVVQIAA 276
           G   HGQLGH        T +R        P+ I             P+E+V  ++  A 
Sbjct: 244 GLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDV-QILDFAC 302

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      +S+G G    LGH    DE  PR  + F  +   V+RV  G    V
Sbjct: 303 GNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQKRKVLRVFCGTAFSV 362

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           A+   G V+ +G+    A  +        P+P+  L
Sbjct: 363 AITDVGCVHLFGRNRVNADAN------MYPKPVQDL 392


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 24/291 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+  + D   P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
             V+TWGKG  G LGHGD  D+ +P  + +L+     H+A  G +  A +C
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIAC-GANFTAAIC 418



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 16/219 (7%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V     H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G  
Sbjct: 81  HVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI-HPRLIESLAVCNVDIVACGEF 139

Query: 227 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            T  +T  G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +
Sbjct: 140 HTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALI 199

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------ 338
           T  G +++FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+      
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVT 257

Query: 339 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                 SSG ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 258 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASL 296



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 7/196 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           + RP+ +E+   +    V  G+  +  +T  G V T G  + G+LGHG   D   P+ I 
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIE 124

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG+      P+ I     +
Sbjct: 125 SL-AVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG-ALE 182

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV 378
           G+ V  VS G  H   + + G ++T+G G  G LGHG+    + P   E LS LK+    
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 379 QGLSVLAEVCPTIVQE 394
            G+   A +   IV +
Sbjct: 243 CGVWHTAAIVEVIVTQ 258



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKSIA----PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P+ ++      A++GL+V    C T
Sbjct: 172 WIPKRIAG-----ALEGLAVAYVSCGT 193


>gi|157137553|ref|XP_001664005.1| Bj1 protein, putative [Aedes aegypti]
 gi|108869688|gb|EAT33913.1| AAEL013820-PA [Aedes aegypti]
          Length = 484

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 100/240 (41%), Gaps = 30/240 (12%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +    +    G N     G  D  R   +P  V  LK V   Q   G N T FLT 
Sbjct: 126 HSVLITMDRKALAFGRNQHGQLGQSDL-RTFEKPTPVNGLKDVKVVQAACGRNHTLFLTD 184

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
            G V+ CG N HGQ G G T   PT      L+  G  +V++A G  + + +  NG +YS
Sbjct: 185 NGVVYACGDNRHGQCGVGHT--NPTVLKATRLKYTGPPIVKVACGAEFSMILDINGRLYS 242

Query: 293 FGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK----------GIHVVRVSA 330
           FG   +  LGH               H E  PR I T+  K           + ++  + 
Sbjct: 243 FGLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDVQILDFAC 302

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPT 390
           G+ H VA+DS    ++WG G  G LGH    D+ +P     L  +  +Q   VL   C T
Sbjct: 303 GNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPR----LNKYFDIQKRKVLRVFCGT 358



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 34/276 (12%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI+ +    + G +  G LG   +       T +N      VVQ +   NH  F+  
Sbjct: 126 HSVLITMDRKALAFGRNQHGQLGQS-DLRTFEKPTPVNGLKDVKVVQAACGRNHTLFLTD 184

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN    CG   TN  + +   ++   G P  +V  G  F+  L I G +++ 
Sbjct: 185 NGVVYACGDNRHGQCGVGHTNPTVLKATRLK-YTGPPIVKVACGAEFSMILDINGRLYSF 243

Query: 241 GSNTHGQLGHGD------TLDR------PTPKSIA------------PLEEVGSVVQIAA 276
           G   HGQLGH        T +R        P+ I             P+E+V  ++  A 
Sbjct: 244 GLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDV-QILDFAC 302

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      +S+G G    LGH    DE  PR  + F  +   V+RV  G    V
Sbjct: 303 GNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQKRKVLRVFCGTAFSV 362

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           A+   G V+ +G+    A  +        P+P+  L
Sbjct: 363 AITDVGCVHLFGRNRVNADAN------MYPKPVQDL 392


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 125/272 (45%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  IS S  +F+ G  S   G+LG+    +  +   R++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLP-KRVSGPLEGLQVLSVACG 371

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF---- 227
             H+A +  +G+++T GD      GH +     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALITSTGRLYTFGDGKFGALGHGNRESAAY-PKEVEALNGFRTVKVACGVWHSAAI 430

Query: 228 ------TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                 TG   +   ++T G     +LG GD   R  P  +  L E  +  Q+  G +  
Sbjct: 431 VEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLE-HNFHQLGCGQNMT 489

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G VY+ GS  N  LG+  + D   P  ++      + V  +S G  HV  L S 
Sbjct: 490 VALATSGHVYTMGSSDNGQLGN-PKSDGKHPCLVKDKLANEL-VEEISCGAAHVAVLTSR 547

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHGD  DK  P  + +LK
Sbjct: 548 SEVYTWGLGANGRLGHGDLNDKKTPTIVEALK 579



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 17/224 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIVCGSRHVALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESLSVTIVDFISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
             +T  G +Y+FG G    LGHG +     P+ ++     G   V+V+ G  H  A+   
Sbjct: 376 ALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEAL--NGFRTVKVACGVWHSAAIVEA 433

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                    S  +YTWG G    LG GD+  + +P  L +L  H
Sbjct: 434 SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH 477



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 16/229 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G +H+ LI S   +++ G    G LGHG   +       +   +    V+V+   
Sbjct: 366 LSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYP-KEVEALNGFRTVKVACGV 424

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H+A +++          S +++T GD      G  D    +  P  ++AL      Q+ 
Sbjct: 425 WHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLI-PTCLQALLEHNFHQLG 483

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G N T  L   GHV+T GS+ +GQLG+  + D   P  +        V +I+ G +++ 
Sbjct: 484 CGQNMTVALATSGHVYTMGSSDNGQLGNPKS-DGKHPCLVKDKLANELVEEISCGAAHVA 542

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            +T    VY++G G+N  LGHG+ +D+  P  ++  + +  HV  +S G
Sbjct: 543 VLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDR--HVKSISCG 589



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 4/178 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 304 SLS-VTIVDFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L     V+
Sbjct: 362 GLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVK 419



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R ++    V HS+ IVE S     + TG    + + +  +++ G      LG G +  + 
Sbjct: 416 RTVKVACGVWHSAAIVEAS-----VQTG----MNVVSKKLYTWGDGDKNRLGQGDKEARL 466

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRP-IFRPR 208
           +  T +      +  Q+   +N    +  SG V+T G  DN        D   P + + +
Sbjct: 467 IP-TCLQALLEHNFHQLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDK 525

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           L   L     ++++ G      LT R  V+T G   +G+LGHGD  D+ TP  +  L++
Sbjct: 526 LANEL----VEEISCGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKD 580


>gi|405964349|gb|EKC29846.1| Serine/threonine-protein kinase Nek9 [Crassostrea gigas]
          Length = 580

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 11/163 (6%)

Query: 220 QVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           Q+ AG +    +T+   V+T      GS   GQLGHG+T     PK +   EE+  V+Q+
Sbjct: 96  QIAAGHSHFAVVTMEKEVYTWANVQGGSEIVGQLGHGNTSAYKAPKKV---EELEDVIQV 152

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  +   V+  G VY+FGS    CLG  E+ D  L P  +  F    +    +S G+ 
Sbjct: 153 SCGEDFTFCVSDEGKVYAFGSNYYGCLGLEEEDDTVLSPVPLPFFSSNPVE--EISCGEN 210

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           HV AL   G VYTWG G  G LG G E D + P+ +++   HL
Sbjct: 211 HVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHL 253



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 30/307 (9%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQCVSFT 155
              DI       +QI  G  H  +++    V++      GS + G LGHG  T+   +  
Sbjct: 83  QKQDIFVNGKSAIQIAAGHSHFAVVTMEKEVYTWANVQGGSEIVGQLGHG-NTSAYKAPK 141

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           ++       V+QVS  E+    V   G+V+  G N   C G  + +  +  P  +     
Sbjct: 142 KVE--ELEDVIQVSCGEDFTFCVSDEGKVYAFGSNYYGCLGLEEEDDTVLSPVPLPFFSS 199

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQI 274
            P ++++ G N    LT  G V+T G    G+LG G   D  TP+ +A P + +   V  
Sbjct: 200 NPVEEISCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHLFKHVVC 259

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---------- 324
            +  ++++ V  NG V + GS  +  LG   +   L+   +Q +     +          
Sbjct: 260 GSDGTFLITV--NGRVLAAGSNEHNKLGFNSETSGLRKSKVQVYDIPCKYTFSTVKPLTR 317

Query: 325 --VVRVSAGDEHVVALDSSGYVYTWGKGYC---GALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             + +V+AG +H  A+DS      +    C     L H DEI     EP+   +      
Sbjct: 318 YIITKVAAGKDHSAAVDSDLDQVIYDCLLCRIHSFLAHRDEI---FEEPVKKWRDVHGNN 374

Query: 380 GLSVLAE 386
            L+++ E
Sbjct: 375 ALAMMYE 381


>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
           CCMP2712]
          Length = 272

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 94/200 (47%), Gaps = 5/200 (2%)

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           + +L  G+VFT G N     GH  ++          A     C QV AG NF+  LT RG
Sbjct: 45  SVILSDGKVFTWGQNKHGQLGHGPSD--YLGSLGPTAKTDGKCVQVAAGYNFSMALTDRG 102

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFG 294
            +   G   HG L  GD L + +P+ I  L   G VV +I  G  +   +   G   ++G
Sbjct: 103 EIFVFGEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWG 162

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            GS+  LGH  + DE  PR ++      + V  +S G +H   L S   +YT G G  G 
Sbjct: 163 CGSDGQLGHSSRDDEHFPRKVEHLAN--VSVRTISCGSKHTCFLTSDNSLYTCGNGKDGK 220

Query: 355 LGHGDEIDKTLPEPLSSLKS 374
           LGHGDE     P+ + +L++
Sbjct: 221 LGHGDERSYLYPKKVETLQA 240



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 98  QSVEHS-SDIVETSAGNMQ-ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           Q + HS +D+ +T    ++ +  G  H++++S+  VF+ G +  G LGHGP  +  +   
Sbjct: 18  QMMNHSLTDVQQTFDLRVEDMACGSAHSVILSDGKVFTWGQNKHGQLGHGP--SDYLGSL 75

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK- 214
                +    VQV+A  N +  +   G++F  G+         D       P+++++L  
Sbjct: 76  GPTAKTDGKCVQVAAGYNFSMALTDRGEIFVFGEGRHGVLAQGD-ELSKSSPQVIDSLSV 134

Query: 215 -GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G    ++  G      +   G   T G  + GQLGH    D   P+ +  L  V SV  
Sbjct: 135 PGYVVDKIFCGERHCACIVRYGQALTWGCGSDGQLGHSSRDDEHFPRKVEHLANV-SVRT 193

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ G  +   +T +  +Y+ G+G +  LGHG++   L P+ ++T +     V  VS GD 
Sbjct: 194 ISCGSKHTCFLTSDNSLYTCGNGKDGKLGHGDERSYLYPKKVETLQA----VKEVSCGDY 249

Query: 334 HVVALDSSGYVYTWGKGYCGALG 356
           H   +D    +YT+G G  G LG
Sbjct: 250 HTACIDGKSIIYTFGSGTRGQLG 272


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 28/240 (11%)

Query: 127 SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPS--AAHVVQVSASENHAAF 177
           S   V+S G+   G LG       H P+     S + I+  +   AHV+ ++++      
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSA------ 69

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
               G+  + G  +S   GH +       P+ V +L G     V+AG + +GF++  G V
Sbjct: 70  ----GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFV 125

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            TCG  + GQLGHGD     +P  ++   ++  V Q+A G  + L +     VY FGSG 
Sbjct: 126 FTCGDGSFGQLGHGDNASHCSPVKVSCFVDL-HVAQVACGMRHSLVLLKGNQVYGFGSGK 184

Query: 298 NFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
              L  G  +D ++    P+ +  F  +G+ +V  +A  +H  A+   G+VYTWG+G+ G
Sbjct: 185 RGQL--GVSNDRVKSVNVPKVVSGF--EGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKG 240



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 19/264 (7%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+  +S++  VF+CG    G LGHG   + C S  +++     HV QV+    H
Sbjct: 109 VSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHC-SPVKVSCFVDLHVAQVACGMRH 167

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  +L+  QV+  G       G   D  + +  P++V   +GV      A  + +  +++
Sbjct: 168 SLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSV 227

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            GHV+T G    G        D   P+    L    +  ++A G ++ LA++G G VY  
Sbjct: 228 DGHVYTWGRGFKG------FEDAHVPQC---LNSSLNFTKVALGWNHALAMSGEGEVYML 278

Query: 294 GSGSNFCL------GHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSSGYVYT 346
           G      L      G  +   +L+   ++      G  +  ++AG EH V +   G + T
Sbjct: 279 GGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKT 338

Query: 347 WGKGYCGALGHGDEIDKTLPEPLS 370
           WG G  G LG GD  D+T P  +S
Sbjct: 339 WGWGEHGQLGLGDTRDQTSPVTVS 362



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 99/236 (41%), Gaps = 20/236 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S     S G    G LGHG   +  +    +       +  VSA  +H+ FV  +G V
Sbjct: 66  LTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFV 125

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           FTCGD S    GH D N     P  V     +   QV  G+  +  L     V+  GS  
Sbjct: 126 FTCGDGSFGQLGHGD-NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGK 184

Query: 245 HGQLGHGDTLDR----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG-SNF 299
            GQLG  +  DR      PK ++  E V  +V  AA   +  AV+ +G VY++G G   F
Sbjct: 185 RGQLGVSN--DRVKSVNVPKVVSGFEGV-EIVGTAANGDHSAAVSVDGHVYTWGRGFKGF 241

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                   D   P+ + +     ++  +V+ G  H +A+   G VY  G  + G L
Sbjct: 242 -------EDAHVPQCLNS----SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVL 286



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 4/135 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G+ T GQLG     D   P+ +     + S+  +A G ++++A+T  G   S+G G
Sbjct: 20  VWSWGAGTEGQLGTKILQDEHFPQLLHQFS-LSSISSLACGGAHVIALTSAGKALSWGRG 78

Query: 297 SNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           ++  LGHGE   + L P+A+ +    G  +  VSAG  H   +  +G+V+T G G  G L
Sbjct: 79  NSGQLGHGEVVSNTLYPKAVTSL--DGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQL 136

Query: 356 GHGDEIDKTLPEPLS 370
           GHGD      P  +S
Sbjct: 137 GHGDNASHCSPVKVS 151



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G+G+   LG     DE  P+ +  F    I    ++ G  HV+AL S+G   +WG+
Sbjct: 20  VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSIS--SLACGGAHVIALTSAGKALSWGR 77

Query: 350 GYCGALGHGDEIDKTL-PEPLSSLKSHL 376
           G  G LGHG+ +  TL P+ ++SL  + 
Sbjct: 78  GNSGQLGHGEVVSNTLYPKAVTSLDGYF 105


>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
          Length = 1426

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  ENHAA + + G+VF+ G  SS   GH+  N  +  P++V+ L  V  K V  G
Sbjct: 489 VQSIACGENHAAIITKQGEVFSWGKESSGRLGHK-VNVSLSCPKIVKTLASVHVKVVAFG 547

Query: 225 LNFTGFLTIRGHVHTC--GSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +     G+N+ G L      ++  P K   P++ + SV +IA G  +M
Sbjct: 548 SKHTCAVTVSGELFEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNI-SVSKIACGEWHM 606

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G ++++G G+   LGHG+     +P+ +++   KG+ +  V+ G  H  A+   
Sbjct: 607 AIITSSGQLFTYGDGTFGVLGHGDTQGIARPKEVESL--KGLRMSSVACGPWHTAAIVEV 664

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                    SG ++TWG    G L H D+  K +P  + SL
Sbjct: 665 MSSFKANAPSGKLFTWGNADRGKLDHADKKMKLVPTCVDSL 705



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 5/202 (2%)

Query: 174 HAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           HAA  L S   +F  GD      G  D  + +  PRLV + K +  + +  G N    +T
Sbjct: 446 HAACRLDSLKDIFLWGDVLGSMLGSEDLPKAL--PRLVGSTKMLDVQSIACGENHAAIIT 503

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +G V + G  + G+LGH   +    PK +  L  V  V  +A G  +  AVT +G ++ 
Sbjct: 504 KQGEVFSWGKESSGRLGHKVNVSLSCPKIVKTLASV-HVKVVAFGSKHTCAVTVSGELFE 562

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G G+N      + +   Q    + F     I V +++ G+ H+  + SSG ++T+G G 
Sbjct: 563 WGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAIITSSGQLFTYGDGT 622

Query: 352 CGALGHGDEIDKTLPEPLSSLK 373
            G LGHGD      P+ + SLK
Sbjct: 623 FGVLGHGDTQGIARPKEVESLK 644



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++  E H A +  SGQ+FT GD +    GH DT + I RP+ VE+LKG+    V  G
Sbjct: 596 VSKIACGEWHMAIITSSGQLFTYGDGTFGVLGHGDT-QGIARPKEVESLKGLRMSSVACG 654

Query: 225 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +             G + T G+   G+L H D   +  P  +  L  V   +Q+
Sbjct: 655 PWHTAAIVEVMSSFKANAPSGKLFTWGNADRGKLDHADKKMKLVPTCVDSLI-VYDFIQV 713

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           + G +  + +T  GVV++ GS  +  LG+ +   E     I T     K   V  +S+G 
Sbjct: 714 SCGMALTVVLTVTGVVFTVGSSRHGQLGNPQVDGEY----ICTVEGLLKTEFVREISSGS 769

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  +G V+TWGKG  G LG GD ++++ P  + +L+
Sbjct: 770 SHVAVLTMNGKVFTWGKGAEGQLGLGDYVNRSSPTLVEALE 810



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 20/237 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS----- 161
           +I  G +H  +I++S  +F+ G    GVLGHG       P+  + +   R++  +     
Sbjct: 598 KIACGEWHMAIITSSGQLFTYGDGTFGVLGHGDTQGIARPKEVESLKGLRMSSVACGPWH 657

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            A +V+V +S    A    SG++FT G+       H D    +  P  V++L      QV
Sbjct: 658 TAAIVEVMSSFKANA---PSGKLFTWGNADRGKLDHADKKMKLV-PTCVDSLIVYDFIQV 713

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G+  T  LT+ G V T GS+ HGQLG+   +D     ++  L +   V +I++G S++
Sbjct: 714 SCGMALTVVLTVTGVVFTVGSSRHGQLGN-PQVDGEYICTVEGLLKTEFVREISSGSSHV 772

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T NG V+++G G+   LG G+  +   P  ++    +G HV  ++ G     A+
Sbjct: 773 AVLTMNGKVFTWGKGAEGQLGLGDYVNRSSPTLVEAL--EGRHVESIACGSSFTAAI 827



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 17/217 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSAAHVVQVSASEN 173
           I  G  H  +I+    VFS G    G LGH    +  C    +    ++ HV  V+    
Sbjct: 492 IACGENHAAIITKQGEVFSWGKESSGRLGHKVNVSLSCPKIVKT--LASVHVKVVAFGSK 549

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRP-RLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG++F  G+ ++      D   R  + P +L   +  +   ++  G      +
Sbjct: 550 HTCAVTVSGELFEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAII 609

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------- 284
           T  G + T G  T G LGHGDT     PK +  L+ +  +  +A GP +  A+       
Sbjct: 610 TSSGQLFTYGDGTFGVLGHGDTQGIARPKEVESLKGL-RMSSVACGPWHTAAIVEVMSSF 668

Query: 285 ---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
                +G ++++G+     L H ++  +L P  + + 
Sbjct: 669 KANAPSGKLFTWGNADRGKLDHADKKMKLVPTCVDSL 705


>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
 gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
          Length = 392

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 115/250 (46%), Gaps = 12/250 (4%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S ++  GS   GVLG      +  S   ++    + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANGVLGSSSVKGKTTSPVPVD--DLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            LQP  +         V+ +S G++   A+ S+G VY WG    G LG G    +  P  
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDVYGWGYN-QGKLGDGTNKSRNSPVL 278

Query: 369 LSSLKSHLAV 378
           +  +   +AV
Sbjct: 279 IDGIYDVIAV 288



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 20/256 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + + TG  HT+ L  + +V++ G S  G LG+  E  +    T  +    + V QV A E
Sbjct: 86  LMVDTGTSHTVALQKDGTVWTWGWSAYGELGN--EKAKSTEKTPHHVKWLSDVKQVRAGE 143

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           N    + + G V+  G N S   G   T   + +P  V  L  +    + AG  F+  L+
Sbjct: 144 NFTLALKEDGTVWAFGKNRSGQLGDGTTETRV-KPVQVSGLTDIVA--IDAGEEFSLALS 200

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVV 290
             G V   G+N+ GQLG+G        K++ P++  E+  V+ I+ G     AVT NG V
Sbjct: 201 EDGTVWAWGNNSVGQLGNG-----TREKALQPVQVSELTDVIAISTGEKQGYAVTSNGDV 255

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGK 349
           Y +G      LG G       P  I      GI+ V+ V +G +H +AL   G V+ WG 
Sbjct: 256 YGWGYNQG-KLGDGTNKSRNSPVLID-----GIYDVIAVDSGKQHTLALKEDGTVWAWGT 309

Query: 350 GYCGALGHGDEIDKTL 365
              G LG+G  ++ ++
Sbjct: 310 NTHGQLGYGTPVNYSM 325



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 16/219 (7%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DIV   AG        +   L  + +V++ G++  G LG+G   T+  +   +      
Sbjct: 184 TDIVAIDAGE------EFSLALSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSELT 234

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ +S  E     V  +G V+  G N         TN+    P L++ +  V    V +
Sbjct: 235 DVIAISTGEKQGYAVTSNGDVYGWGYNQGKLG--DGTNKSRNSPVLIDGIYDVIA--VDS 290

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD---RPTPKSIAPLEEVGSVVQIAAGPSY 280
           G   T  L   G V   G+NTHGQLG+G  ++    P    +   E +  +V I AG  +
Sbjct: 291 GKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFH 350

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             A+  +G V+S+G  SN  LG G    ++ P  I+T  
Sbjct: 351 SHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 109/239 (45%), Gaps = 16/239 (6%)

Query: 145  GPETTQ---CVSFTRINFP-----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
            GPE+ Q     S  ++N P     S   VV VS   NH A + ++G V+T G N S   G
Sbjct: 849  GPESEQDDGVSSGGKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELG 908

Query: 197  HRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
            H D +  P   P+ V   K    K+V  G   T   T  G V+  G+   GQLG GD   
Sbjct: 909  HGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968

Query: 256  RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
               P  I  L ++  V Q+AAG ++ + V  +G V  FG G    LG G + D L P  +
Sbjct: 969  HWLPVPIKTLRKM-HVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027

Query: 316  QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLSSL 372
            Q        +V+ + G  H   L  +G VYT G    G LGH D +  D+  P+ +  L
Sbjct: 1028 QAMP----SIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGL 1082



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 5/156 (3%)

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGP 278
            V+ G N    LT  GHV+T G N  G+LGHGD    P   PK +   +    V ++  G 
Sbjct: 880  VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKS-KCVKEVVCGG 938

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + LA T +G VY +G+G    LG G++     P  I+T R+  +HV +++AG  H + +
Sbjct: 939  EHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRK--MHVTQLAAGYAHTIVV 996

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
              SG V  +G G  G LG G   D  +P  L ++ S
Sbjct: 997  LKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS 1032



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 106/248 (42%), Gaps = 27/248 (10%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            ++  G  HTL  + S SV+  G+   G LG G  T   +    I      HV Q++A   
Sbjct: 933  EVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVP-IKTLRKMHVTQLAAGYA 991

Query: 174  HAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   VL+SG+V  F  G+      G R   + +  P  ++A+  +   Q   G   T  L
Sbjct: 992  HTIVVLKSGEVMVFGGGEVGQLGTGMR---KDLLVPTKLQAMPSI--VQAACGYCHTALL 1046

Query: 232  TIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
            T  G V+TCGS   GQLGH D L  DR  PK +  L   G  ++ IA G  + +A+T   
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN--GKRIRFIACGSFHTIAITDLD 1104

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR---------VSAGDEHVVALD 339
             VY++G       G        Q R     +R    +V+         VS G  H VA  
Sbjct: 1105 NVYTWGG----VQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATT 1160

Query: 340  SSGYVYTW 347
              G VY W
Sbjct: 1161 MDGEVYVW 1168



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 118/273 (43%), Gaps = 30/273 (10%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            Q+  G  HT+++  S  V   G    G LG G      V       PS   +VQ +    
Sbjct: 985  QLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS---IVQAACGYC 1041

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A + ++G+V+TCG   S   GH D        P++VE L G   + +  G   T  +T
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAIT 1101

Query: 233  IRGHVHTCG----SNTHG---QLGHGDTLDRPTPKSIAPLEEVGSVVQIAA-GPSYMLAV 284
               +V+T G    +++ G   Q      L R TP  +  L  +G  + + + G ++ +A 
Sbjct: 1102 DLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGL--MGKRISLVSCGHAHSVAT 1159

Query: 285  TGNGVVYSFGS-----------GSNFCLGHGEQHDELQPRAI---QTFRRKGIHVVRVSA 330
            T +G VY + S           GS      G     L   AI   Q  + K + V   +A
Sbjct: 1160 TMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPV-VKHAAA 1218

Query: 331  GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G+E  + +  +G +Y+WG G  G LG GD+ D+
Sbjct: 1219 GEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDR 1251



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRV 328
           VV ++ G ++  A+T NG VY++G   +  LGHG++    +L P+ +  F+ K +    V
Sbjct: 877 VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVK--EV 934

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
             G EH +A   SG VY WG G  G LG GD     LP P+ +L+ 
Sbjct: 935 VCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRK 980



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 41/245 (16%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAA 163
            +Q   G  HT L++ +  V++CGS++ G LGH          P+  + ++  RI F    
Sbjct: 1034 VQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRF---- 1089

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFR---PRLVEALKGVP 217
                ++    H   +     V+T G      S     ++    I +   P +V+ L G  
Sbjct: 1090 ----IACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR 1145

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPL--------E 266
               V+ G   +   T+ G V+   S    Q   L  G  L   +  + APL        +
Sbjct: 1146 ISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ 1205

Query: 267  EVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRR 320
            +  S   V   AAG  + L VT NG++YS+GSG+   LG G+Q D    +Q    +  RR
Sbjct: 1206 DAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVAKSEESRR 1265

Query: 321  KGIHV 325
            + + +
Sbjct: 1266 RSVRL 1270


>gi|195115491|ref|XP_002002290.1| GI17306 [Drosophila mojavensis]
 gi|193912865|gb|EDW11732.1| GI17306 [Drosophila mojavensis]
          Length = 486

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 27/253 (10%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      ++VQV+A  +H  F+  
Sbjct: 126 HTILINMDRKALGFGRNPSGQLGLSQDMKLVEKPTLIPALEQLNIVQVAAGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  + +  IF P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNAHPNIFTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSIA------------PLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G     V  G    +
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDSQGRGGRSVYCGSTFSL 363

Query: 337 ALDSSGYVYTWGK 349
            ++  G +Y +G+
Sbjct: 364 IINELGLLYLFGQ 376


>gi|428184753|gb|EKX53607.1| hypothetical protein GUITHDRAFT_160884 [Guillardia theta CCMP2712]
          Length = 308

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 17/217 (7%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           SAA + Q S+ +N A      G++F  G ++S   G         +P  +   +  P   
Sbjct: 88  SAAGIRQFSSMQNKA------GKLFVSGWSNSGALGLGKDVVKAKQPTEIPIPE--PVID 139

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+ G  FT F+T  G V++ G N +G+LG+ +        +I    +   +V+IAAG  +
Sbjct: 140 VSCGKKFTVFVTESGKVYSMGDNKNGELGNPNAGSSSYEPTIVHGLDGIKIVKIAAGQYH 199

Query: 281 MLAVTGNGVVYSFGSGSNF-------CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +LA++  G VYS+G G +         LGHG++     P+ I+  R  G  +  +S G +
Sbjct: 200 VLALSDIGEVYSWGWGGSGTPGAGVGALGHGDKASLPVPKRIE--RLNGEKITNISCGAK 257

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           H VAL   G ++TWG G  G LGHG+  D   PEP+S
Sbjct: 258 HSVALSQDGTMFTWGHGEQGRLGHGNNTDFLQPEPIS 294



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++ ++      +F  G S  G LG G +  +    T I  P    V+ VS  +    FV 
Sbjct: 94  QFSSMQNKAGKLFVSGWSNSGALGLGKDVVKAKQPTEIPIPEP--VIDVSCGKKFTVFVT 151

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +SG+V++ GDN +   G+ +     + P +V  L G+   ++ AG      L+  G V++
Sbjct: 152 ESGKVYSMGDNKNGELGNPNAGSSSYEPTIVHGLDGIKIVKIAAGQYHVLALSDIGEVYS 211

Query: 240 C---GSNTH----GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
               GS T     G LGHGD    P PK I  L     +  I+ G  + +A++ +G +++
Sbjct: 212 WGWGGSGTPGAGVGALGHGDKASLPVPKRIERLNGE-KITNISCGAKHSVALSQDGTMFT 270

Query: 293 FGSGSNFCLGHGEQHDELQPRAI 315
           +G G    LGHG   D LQP  I
Sbjct: 271 WGHGEQGRLGHGNNTDFLQPEPI 293



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           F+      G +   G +  G LG G  + +    +  P+ E   V+ ++ G  + + VT 
Sbjct: 95  FSSMQNKAGKLFVSGWSNSGALGLGKDVVKAKQPTEIPIPE--PVIDVSCGKKFTVFVTE 152

Query: 287 NGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           +G VYS G   N  LG+        +P  +      GI +V+++AG  HV+AL   G VY
Sbjct: 153 SGKVYSMGDNKNGELGNPNAGSSSYEPTIVHGL--DGIKIVKIAAGQYHVLALSDIGEVY 210

Query: 346 TWGKGY-------CGALGHGDEIDKTLPEPLSSL 372
           +WG G         GALGHGD+    +P+ +  L
Sbjct: 211 SWGWGGSGTPGAGVGALGHGDKASLPVPKRIERL 244



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 13/164 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G+  T+ ++ S  V+S G +  G LG+    +     T ++      +V+++A +
Sbjct: 138 IDVSCGKKFTVFVTESGKVYSMGDNKNGELGNPNAGSSSYEPTIVHGLDGIKIVKIAAGQ 197

Query: 173 NHAAFVLQSGQVFTCGDNSS-------FCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAG 224
            H   +   G+V++ G   S          GH D  + P+  P+ +E L G     ++ G
Sbjct: 198 YHVLALSDIGEVYSWGWGGSGTPGAGVGALGHGDKASLPV--PKRIERLNGEKITNISCG 255

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLE 266
              +  L+  G + T G    G+LGHG+  D  +P P S +P+ 
Sbjct: 256 AKHSVALSQDGTMFTWGHGEQGRLGHGNNTDFLQPEPISESPVR 299


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASENHAA 176
           GR HTL+++   +V++ G +  G LG G +T +  +F RI+F ++ H + Q+SA  N +A
Sbjct: 95  GRNHTLILTVVGNVYAAGGNNEGQLGLG-DTEERNTFHRISFFTSEHNIKQLSAGSNTSA 153

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + G++F  GDNS    G  D    +  P  V    G P   ++ G   + F+T+ G 
Sbjct: 154 ALSEDGRLFMWGDNSEGQIGLNDV-ISVCVPHQVNI--GKPISWISCGYYHSAFVTMDGE 210

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           ++T G    G+LG    L  +  TP+ +A + E   V+Q+A G  + + +T    VY+FG
Sbjct: 211 LYTFGEPESGKLGLPKELLINHRTPQLVAGIPE--KVIQVACGGGHTVVLT-EKAVYTFG 267

Query: 295 SGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G    LG G    + L+P+ I+  + + I    +S G+ H   +   G +YT+G G  G
Sbjct: 268 LGQFGQLGLGTFCFETLEPKVIEQIKNQKI--TYISCGENHTALISDIGLMYTFGDGRHG 325

Query: 354 ALGHGDE 360
            LG G E
Sbjct: 326 KLGLGLE 332



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 5/194 (2%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S  + H A V  + +++  G N+    G   +   + +P  V+ALK    +    G N 
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLG-LGSKSDVKKPTCVKALKPEKVQFAACGRNH 98

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT+ G+V+  G N  GQLG GDT +R T   I+      ++ Q++AG +   A++ +
Sbjct: 99  TLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAALSED 158

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G ++ +G  S   +G  +      P  +      G  +  +S G  H   +   G +YT+
Sbjct: 159 GRLFMWGDNSEGQIGLNDVISVCVPHQVNI----GKPISWISCGYYHSAFVTMDGELYTF 214

Query: 348 GKGYCGALGHGDEI 361
           G+   G LG   E+
Sbjct: 215 GEPESGKLGLPKEL 228



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 4/147 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA-GPS 279
           ++ G   T  +T    ++  GSN  GQLG G   D   P  +  L+     VQ AA G +
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKP--EKVQFAACGRN 97

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + L +T  G VY+ G  +   LG G+  +      I  F  +  ++ ++SAG     AL 
Sbjct: 98  HTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEH-NIKQLSAGSNTSAALS 156

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
             G ++ WG    G +G  D I   +P
Sbjct: 157 EDGRLFMWGDNSEGQIGLNDVISVCVP 183



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++ G  +   VTGN  +Y FGS +   LG G + D  +P  ++  + + +     + G  
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFA--ACGRN 97

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLS 382
           H + L   G VY  G    G LG GD  ++     +S   S   ++ LS
Sbjct: 98  HTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQLS 146


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 19/263 (7%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 171
           Q  +G  H+LL+ SN  V SCG +  G LG    P + Q     RI      HV  VS  
Sbjct: 27  QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ---LKRIRALETLHVDLVSCG 83

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VF  G  S    G  +       P  ++ L  +  KQV+ G   +  L
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLAL 143

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN+ GQLG G     + +P+ +  L+ +  + Q+AAG ++  A++ +G  
Sbjct: 144 SEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PLAQVAAGGAHSFALSLSGT- 201

Query: 291 YSFGSGSNFCLGHGEQHDE------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            SFG G N   G    H         +P +I   +  G  V+ +S G EH V L  +G V
Sbjct: 202 -SFGWGRNNA-GQLALHKNNVSGQSYKPYSISALKNLG--VIYISCGYEHTVVLTQNGKV 257

Query: 345 YTWGKGYCGALGHGDEIDKTLPE 367
           +T+G    G LGH    +K+ P+
Sbjct: 258 FTFGDNTYGQLGHSPTAEKSGPQ 280



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 84/172 (48%), Gaps = 7/172 (4%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P+ R R+   L GV  +Q  +G   +  L   G VH+CG N  GQLG          K I
Sbjct: 12  PVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRI 69

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRK 321
             LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    
Sbjct: 70  RALETL-HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN-- 126

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSL 372
            I + +VS G  H +AL   G V++WG    G LG G +   +  P+ + SL
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSL 178



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 6/184 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G YH+L +S    VFS GS+  G LG G +     S  R+       + QV+A   
Sbjct: 132 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 191

Query: 174 HAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +  SG  F  G N++        + +   ++P  + ALK +    ++ G   T  L
Sbjct: 192 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 251

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVV 290
           T  G V T G NT+GQLGH  T ++  P+ +  ++  G V QI  G  + LA V   G V
Sbjct: 252 TQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGID--GLVSQIDCGSYHTLAYVYTTGKV 309

Query: 291 YSFG 294
            SFG
Sbjct: 310 VSFG 313


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 11/254 (4%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVS 169
           G +++  G  H+ +++ S  ++  GS+  G LG G  ++    SF +   P    V +V+
Sbjct: 39  GVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK--VRKVA 96

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              NH     +SG++F+ G N     GH D    +  P+ +E++  +  KQ+  G   + 
Sbjct: 97  CGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELL-PKEIESIPQMEIKQIACGTYHSI 155

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L+  G V+  G+N  GQLG G+ ++   PK +   +E   VV ++ G  +   VT +G 
Sbjct: 156 ILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGYYHTALVTRDGF 212

Query: 290 VYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           +Y+FG        L   +  +   P+++          + VS G  H VA+   G+ Y W
Sbjct: 213 LYTFGENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYISVSCGARHTVAITKQGHCYAW 271

Query: 348 GKGYCGALGHGDEI 361
           G G  G LGHG ++
Sbjct: 272 GDGSQGQLGHGTKL 285



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++  G   +  +T  G ++  GSN  GQLG G T     P  + PL+    V ++A G +
Sbjct: 42  EMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLK-PEKVRKVACGRN 100

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +  + +G ++SFG   +  LGH ++ +EL P+ I++  +  + + +++ G  H + L 
Sbjct: 101 HTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQ--MEIKQIACGTYHSIILS 158

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G VY WG    G LG G+E++ +LP+ L   K  ++V
Sbjct: 159 EDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSV 197



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 3/140 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAA-HVVQVSASE 172
           ++ G YHT L++    +++ G +  G LG    + +       +  P+     + VS   
Sbjct: 197 VSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGA 256

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + + G  +  GD S    GH      +  P+ ++ L G  C  V+ G + T  +T
Sbjct: 257 RHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVT 316

Query: 233 IRGHVHTCGSNTHGQLGHGD 252
             G V T G   HG+LG G+
Sbjct: 317 ESGKVFTFGDGRHGKLGQGE 336


>gi|145475257|ref|XP_001423651.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124390712|emb|CAK56253.1| unnamed protein product [Paramecium tetraurelia]
          Length = 399

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 18/219 (8%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + ++G ++T G +S  C  ++D+     RPR ++A  G   K V     FT  +T  G +
Sbjct: 18  IYRAGNLYTWGVHSLGCGINQDSQGDQLRPRRIDAFNGNVAK-VYPSEYFTAVITDNGDL 76

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +T G N +GQLG G+T +  TP+ +    + G  V  +A G ++ +A+  +G VY++G+ 
Sbjct: 77  YTFGHNNYGQLGLGNTEENQTPQLVRFFRDKGLKVTDVALGSNHAVALASDGNVYTWGNA 136

Query: 297 SNFC----------LGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSGYV 344
           +N            LG   Q++   P+A+Q      KG  V   SAG ++ + ++ S  V
Sbjct: 137 NNSIWDQFQGKASGLGDNYQNNIATPQAVQKLVGTPKGKFV---SAGIDYSIVVNESNQV 193

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSV 383
           Y WG G  G LG+G  ++   PE L+ +   L+  G ++
Sbjct: 194 YVWGAGKRGELGNGCSLNFKYPE-LNPIFEQLSKSGYTI 231



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 17/170 (10%)

Query: 235 GHVHTCGSNTHG----QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           G+++T G ++ G    Q   GD L    P+ I      G+V ++     +   +T NG +
Sbjct: 22  GNLYTWGVHSLGCGINQDSQGDQL---RPRRIDAFN--GNVAKVYPSEYFTAVITDNGDL 76

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y+FG  +   LG G   +   P+ ++ FR KG+ V  V+ G  H VAL S G VYTWG  
Sbjct: 77  YTFGHNNYGQLGLGNTEENQTPQLVRFFRDKGLKVTDVALGSNHAVALASDGNVYTWGNA 136

Query: 351 -------YCG-ALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIV 392
                  + G A G GD     +  P +  K     +G  V A +  +IV
Sbjct: 137 NNSIWDQFQGKASGLGDNYQNNIATPQAVQKLVGTPKGKFVSAGIDYSIV 186



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEAL--KGVPC 218
            +V +V  SE   A +  +G ++T G N+      G+ + N+    P+LV     KG+  
Sbjct: 55  GNVAKVYPSEYFTAVITDNGDLYTFGHNNYGQLGLGNTEENQ---TPQLVRFFRDKGLKV 111

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQL--------GHGDTLDR--PTPKSIAPLEEV 268
             V  G N    L   G+V+T G+  +           G GD       TP+++  L   
Sbjct: 112 TDVALGSNHAVALASDGNVYTWGNANNSIWDQFQGKASGLGDNYQNNIATPQAVQKLVGT 171

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG----EQHDELQPRAIQTFRRKGIH 324
                ++AG  Y + V  +  VY +G+G    LG+G     ++ EL P   +   + G  
Sbjct: 172 PKGKFVSAGIDYSIVVNESNQVYVWGAGKRGELGNGCSLNFKYPELNP-IFEQLSKSGYT 230

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           + ++ +     +AL + G V  WG+ Y G+LG
Sbjct: 231 IQKIKSCFAGTLALLNEGIVVGWGRSYYGSLG 262



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 23/221 (10%)

Query: 107 VETSAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFP 160
           ++   GN+ ++    Y T +I+ N  +++ G +  G LG G     +T Q V F R    
Sbjct: 50  IDAFNGNVAKVYPSEYFTAVITDNGDLYTFGHNNYGQLGLGNTEENQTPQLVRFFR---D 106

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD-NSSFCCGHR--------DTNRPIFRPRLVE 211
               V  V+   NHA  +   G V+T G+ N+S     +        +    I  P+ V+
Sbjct: 107 KGLKVTDVALGSNHAVALASDGNVYTWGNANNSIWDQFQGKASGLGDNYQNNIATPQAVQ 166

Query: 212 ALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG- 269
            L G P  K V+AG++++  +     V+  G+   G+LG+G +L+   P+     E++  
Sbjct: 167 KLVGTPKGKFVSAGIDYSIVVNESNQVYVWGAGKRGELGNGCSLNFKYPELNPIFEQLSK 226

Query: 270 ---SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
              ++ +I +  +  LA+   G+V  +G      LG  +Q 
Sbjct: 227 SGYTIQKIKSCFAGTLALLNEGIVVGWGRSYYGSLGVRQQE 267


>gi|161830865|ref|YP_001597067.1| hypothetical protein COXBURSA331_A1358 [Coxiella burnetii RSA 331]
 gi|161762732|gb|ABX78374.1| hypothetical protein COXBURSA331_A1358 [Coxiella burnetii RSA 331]
          Length = 375

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 125/293 (42%), Gaps = 40/293 (13%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFP----SAAHVVQVS 169
           ++  R+  +L     ++  G ++ G LG G   E +Q     +  FP        +VQ++
Sbjct: 62  LSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLN 121

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPI-----FRPRLVEALKGVPCKQV 221
            ++ +       G V+  G N     G    +D   P+     F P   E        QV
Sbjct: 122 FADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP---EWHPDDYIIQV 178

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP-------LEEVGSVVQI 274
             G   T  LT  G+++  G N++GQLG  D  DR  P ++ P       LE    ++++
Sbjct: 179 VVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRP-ALLPWNRFPGLLERNDRIIEL 237

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-----FRRKGIHVVRVS 329
            AG +  LA T  G +Y +G+   + L  G+      P  +        RR+G H+V + 
Sbjct: 238 IAGGARSLARTEQGFIYIWGA--RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELI 295

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDE--------IDKTLPEPLSSLKS 374
           AG +H +A    GY+Y WG+ Y G LG GD         +D     PLS  ++
Sbjct: 296 AGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPPLSQWRN 348



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI-QTF----RRKGIH 324
           ++VQ+ +   +   +T  G +Y +G   +  LG G++ +  QP  + Q F      +G  
Sbjct: 57  TIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDR 116

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +V+++  D ++VA  + G+VY WG  Y G LG  DE D+  P  LS
Sbjct: 117 IVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELS 162


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 27/286 (9%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G++  L+  +  ++ CGS+L   LG  G  T    +F  +   +   + QV+  + H   
Sbjct: 126 GKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLA 185

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRP---IFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           + + GQV+  G +     G R   R     ++P L+++  G   KQ+  G   +  L   
Sbjct: 186 LSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDN 245

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 293
           G +++ G    G+ GHG   D+ TP+ I   +  G ++ QI AG  + LA+T +  VY++
Sbjct: 246 GTLYSWGVGEKGECGHGKFEDQETPQRIKFFD--GKIITQIEAGNHHTLAITADNQVYAW 303

Query: 294 GSGSNFCLGHGEQHDELQPR--------------------AIQTFRRKGIHVVRVSAGDE 333
           G G     G GE  +   P+                     I  F +    + +++AG+ 
Sbjct: 304 GDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEM 363

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           H + L SSG ++++G    G LGH    +   P+ +  + +H  VQ
Sbjct: 364 HTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQ 409



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 16/301 (5%)

Query: 75  SRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN--SSVF 132
           S+ ++ +   + + N++   +F +  +   D++E     M     +Y    I    + V+
Sbjct: 31  SKGIKEQTNYKEDQNFQSRKKFEEYEQEGEDLMEKC---MMSWPNKYSLDQIKKYHAYVW 87

Query: 133 SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS 192
           S G +  G LG G    + +   R+       V+ +S+   H+  V + G+++ CG N  
Sbjct: 88  SFGQNTKGELGTG-HYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLH 146

Query: 193 FCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
              G       ++  F+P  VE L  +  KQV  G   T  L+  G V+  G + H + G
Sbjct: 147 DKLGLEGITTGSKKTFKP--VELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRG 204

Query: 250 HGDTLDRPTPKSIAPLEEV---GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
                 +   K    L +      + QI  G  + LA+  NG +YS+G G     GHG+ 
Sbjct: 205 DRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKF 264

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            D+  P+ I+ F   G  + ++ AG+ H +A+ +   VY WG G  G  G G+  +  +P
Sbjct: 265 EDQETPQRIKFF--DGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIP 322

Query: 367 E 367
           +
Sbjct: 323 Q 323



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 10/202 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G    N  +  P  V  L  +    +++G   +G +T  G +  CGSN
Sbjct: 86  VWSFGQNTKGELGTGHYNE-VLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            H +LG  + +   + K+  P+E +  +   Q+A G  + LA++  G VY +G   +   
Sbjct: 145 LHDKLGL-EGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKR 203

Query: 302 GHGEQ----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           G   Q    + + +P  +Q+F   G  + ++  GD H +ALD +G +Y+WG G  G  GH
Sbjct: 204 GDRSQERKDNAKYKPVLLQSF--AGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGH 261

Query: 358 GDEIDKTLPEPLSSLKSHLAVQ 379
           G   D+  P+ +      +  Q
Sbjct: 262 GKFEDQETPQRIKFFDGKIITQ 283



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 80/186 (43%), Gaps = 25/186 (13%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 164
           QI  G +HTL I+ ++ V++ G    G  G G      +    +NFPS  +         
Sbjct: 283 QIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIP-QLVNFPSQGNNTSYLDDSV 341

Query: 165 -------------VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
                        + Q++A E H   +  SGQ+F+ G N     GH +T     RP+LVE
Sbjct: 342 QQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGH-NTVDNYCRPKLVE 400

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            +      QV AG N +  LT +  V+ CG+N +GQ G  D   R T   +  L  V S 
Sbjct: 401 GMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLLSVNSF 460

Query: 272 VQIAAG 277
              A G
Sbjct: 461 KLYAGG 466



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 29/284 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAA--HVVQVSA 170
           Q+  G YHTL +S    V+  G SL    G    E      +  +   S A   + Q+  
Sbjct: 175 QVACGDYHTLALSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDC 234

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  +  +G +++ G      CGH         P+ ++   G    Q+ AG + T  
Sbjct: 235 GDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQE-TPQRIKFFDGKIITQIEAGNHHTLA 293

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI---------------------APLEEVG 269
           +T    V+  G   +GQ G G+  +   P+ +                        ++  
Sbjct: 294 ITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPP 353

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            + QIAAG  + L +T +G ++SFG      LGH    +  +P+ ++         V+V+
Sbjct: 354 KIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNH--KTVQVA 411

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSL 372
           AG  H + L +   VY  G    G  G  D E+ KT    LS L
Sbjct: 412 AGRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLL 455


>gi|145593744|ref|YP_001158041.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303081|gb|ABP53663.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 577

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 127/277 (45%), Gaps = 10/277 (3%)

Query: 99  SVEHSSDIVETS--AGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS 153
           +  +S+D VE S  AG +   I  G  H+L L S  S+ + G++  G LG G  TT   +
Sbjct: 73  TTTNSTDPVEVSLPAGTLLTDIAGGGKHSLALTSTGSLLAWGNNANGQLGDG-TTTSSNT 131

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
              ++ P+   VV ++A  +H+  +  +G V   GDNSS   G   TN     P  V+  
Sbjct: 132 PVAVDLPAGTEVVAIAAGNDHSLALTSTGAVLAWGDNSSGQLGDG-TNDDRSTPVTVDLP 190

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                  + AG   +  LT  G     G+N  GQLG   T     P ++A L    ++  
Sbjct: 191 TTSTTTAIAAGSVHSLSLTSTGSAFAWGNNDEGQLGDESTTSTNKPVNVA-LTTGTTLTA 249

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           IA G ++ L +T +    ++GS S   LG G   + L P  +      G  V  ++AG  
Sbjct: 250 IAGGSAHSLGITSDNTAVAWGSNSQGQLGDGTNTNALAP--VNVALTTGTTVTAIAAGLL 307

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           H VAL ++G   TWG    G LG+G+ +    P  +S
Sbjct: 308 HSVALLTNGTAATWGNNATGQLGNGNNVTSNTPVEVS 344



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 3/128 (2%)

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T G N  GQLG+G T +   P  ++ L     +  IA G  + LA+T  G + ++G+ +N
Sbjct: 60  TWGQNDRGQLGNGTTTNSTDPVEVS-LPAGTLLTDIAGGGKHSLALTSTGSLLAWGNNAN 118

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG G       P A+      G  VV ++AG++H +AL S+G V  WG    G LG G
Sbjct: 119 GQLGDGTTTSSNTPVAVD--LPAGTEVVAIAAGNDHSLALTSTGAVLAWGDNSSGQLGDG 176

Query: 359 DEIDKTLP 366
              D++ P
Sbjct: 177 TNDDRSTP 184


>gi|157119218|ref|XP_001653306.1| regulator of chromosome condensation [Aedes aegypti]
 gi|108875404|gb|EAT39629.1| AAEL008575-PA [Aedes aegypti]
          Length = 478

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 30/254 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI+ +    + G +  G LG   E       T +      +V+Q +   NH  F+  
Sbjct: 120 HSVLITLDRKALAFGRNQFGQLGQS-ELRTFEKPTPVTGLEEVNVIQAACGRNHTLFLSD 178

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +G V+ CGDN S  CG  +T   I +  RL  A  G P  +V  G  F+  L I+G+V++
Sbjct: 179 TGVVYACGDNKSGQCGVGNTQPTILKATRLNYA--GPPIIKVACGAEFSMILDIKGNVYS 236

Query: 240 CGSNTHGQLGHGDTLD------------RPTPKSIA------------PLEEVGSVVQIA 275
            G   +GQLGH                   +PK I             P+++V  +V  +
Sbjct: 237 FGLPEYGQLGHNTEGKYFVTSTKMSFHFETSPKKIVLYVEKTKDGHVTPIDDV-KIVDFS 295

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++ +A+      +S+G G    LGH EQ DE+ PR I+ F  +   V+RV  G    
Sbjct: 296 CGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPRLIKFFDIQNRKVLRVFCGSSFS 355

Query: 336 VALDSSGYVYTWGK 349
           +A+   G +Y +G+
Sbjct: 356 LAITDIGALYLFGQ 369



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 107/260 (41%), Gaps = 33/260 (12%)

Query: 153 SFTRINFPSAAHVVQVSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           SF R  F S  +   VS  S  H+  +    +    G N     G  +  R   +P  V 
Sbjct: 100 SFHR--FTSETYRSAVSGCSSAHSVLITLDRKALAFGRNQFGQLGQSEL-RTFEKPTPVT 156

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS- 270
            L+ V   Q   G N T FL+  G V+ CG N  GQ G G+T  +PT      L   G  
Sbjct: 157 GLEEVNVIQAACGRNHTLFLSDTGVVYACGDNKSGQCGVGNT--QPTILKATRLNYAGPP 214

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTF 318
           ++++A G  + + +   G VYSFG      LGH  +            H E  P+ I  +
Sbjct: 215 IIKVACGAEFSMILDIKGNVYSFGLPEYGQLGHNTEGKYFVTSTKMSFHFETSPKKIVLY 274

Query: 319 RRK----------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             K           + +V  S G+ H VA+DS    ++WG G  G LGH ++ D+ +P  
Sbjct: 275 VEKTKDGHVTPIDDVKIVDFSCGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPR- 333

Query: 369 LSSLKSHLAVQGLSVLAEVC 388
              L     +Q   VL   C
Sbjct: 334 ---LIKFFDIQNRKVLRVFC 350


>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
           harrisii]
          Length = 552

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF  G++  G LG G +    +   R++      +  +S  S  H       G+V+T
Sbjct: 65  NDEVFVLGTNCSGCLGTG-DILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYT 123

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G + +  LT  G V   G N  G
Sbjct: 124 WGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSG 183

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +      IA G    +AV  +G VY +G   N  LG G  
Sbjct: 184 QVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSS 243

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V ++  G  H + L   G++Y WG    G LG G++ +++ P
Sbjct: 244 GN--QPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYP 301

Query: 367 EPLSSLKSHL 376
            P+S  K  +
Sbjct: 302 TPVSVEKDRV 311



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 11/218 (5%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +  ++ +VF  G N S C G  D    I  PR V+ L  K + C    +G +    
Sbjct: 57  NEVLYSTENDEVFVLGTNCSGCLGTGDILHSI-EPRRVDHLCGKKIACLSYGSGPHVV-I 114

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V+T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 115 ATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEV 174

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  I    ++ G    +A+  SG VY WG  
Sbjct: 175 FAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKI-ATTIACGQMCSMAVVESGEVYVWGYN 233

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
             G LG G   ++  P  +++L      QG+ V   VC
Sbjct: 234 GNGQLGLGSSGNQPTPCRIAAL------QGIRVHKIVC 265


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 11/244 (4%)

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G+LG G ET   +   ++N      V  VSA   HAA ++  G VF  G   S   G   
Sbjct: 60  GLLGLG-ETLDVLYPQKVNLEG---VTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGL-G 114

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           TN+  F P+ +     +P K ++ G + + F+T  G ++  G    GQLG G      +P
Sbjct: 115 TNKSHFTPQPLSFP--MPVKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVLSP 172

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTF 318
             +   E  G V     G  + +  T +G V++FGS     LG G+     + P+ +   
Sbjct: 173 VEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVL 232

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G +V  ++AGD H  A+ S G +YTWG G  G LG+G+ +D +LP  +  L+ +L V
Sbjct: 233 --AGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQ-NLRV 289

Query: 379 QGLS 382
           Q ++
Sbjct: 290 QSVA 293



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 25/261 (9%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++    VF  G    G LG G   +    FT         V  +S   +H+ F+ 
Sbjct: 89  RHAAAIVGGGDVFVWGRGFSGQLGLGTNKSH---FTPQPLSFPMPVKALSCGGSHSLFIT 145

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGFLTIRGHVH 238
           + G+++  G       G   +   +  P  V+  +G    K    G +F+   T  G V 
Sbjct: 146 EDGRLYATGRGKEGQLGT-GSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVF 204

Query: 239 TCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T GS+ +GQLG G       TPK +A L    +V  IAAG  +  AVT +G +Y++G G 
Sbjct: 205 TFGSDDYGQLGLGQFARYAMTPKEVAVLAGK-NVRSIAAGDYHAAAVTSDGKLYTWGYGR 263

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD----------------SS 341
           +  LG+G   D   P  ++  +   + V  V+ G +H VA+                  S
Sbjct: 264 SGQLGNGNTVDVSLPVLVRELQN--LRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLES 321

Query: 342 GYVYTWGKGYCGALGHGDEID 362
           G V+  G+G  G LG GD ++
Sbjct: 322 GEVFVMGRGREGQLGRGDIVE 342



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 21/179 (11%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           +  +   +  VF+ GS   G LG G      ++   +   +  +V  ++A + HAA V  
Sbjct: 193 FSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTS 252

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG----- 235
            G+++T G   S   G+ +T   +  P LV  L+ +  + V  G + T  +  RG     
Sbjct: 253 DGKLYTWGYGRSGQLGNGNTV-DVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQL 311

Query: 236 -----------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                       V   G    GQLG GD ++ P      PL+    V Q+A G S+ LA
Sbjct: 312 MLISSQVLESGEVFVMGRGREGQLGRGDIVESPAVYRSVPLQ----VQQVACGTSHTLA 366


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 24/291 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+     ++ P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGNPRSDGKI-PCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLAVQGLSVLAEVC 388
             V+TWGKG  G LGHGD  D+ +P  + +L+     H+A  G +  A +C
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIAC-GANFTAAIC 418



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 16/212 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G   T  +T 
Sbjct: 88  HSALVTKNGEVFTWGEESGGRLGHGSREDSIH-PRLIESLAVCNVDIVACGEFHTCAVTT 146

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +T  G ++
Sbjct: 147 AGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLF 206

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------DS 340
           +FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+            S
Sbjct: 207 TFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVTQSSSSIS 264

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           SG ++TWG G    LGHGD+  +  P  ++SL
Sbjct: 265 SGKLFTWGDGDKHRLGHGDKEPRLKPTCVASL 296



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 7/196 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           + RP+ +E+   +    V  G+  +  +T  G V T G  + G+LGHG   D   P+ I 
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIE 124

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG+      P+ I     +
Sbjct: 125 SL-AVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGA-LE 182

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV 378
           G+ V  VS G  H   + + G ++T+G G  G LGHG+    + P   E LS LK+    
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 379 QGLSVLAEVCPTIVQE 394
            G+   A +   IV +
Sbjct: 243 CGVWHTAAIVEVIVTQ 258



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 15/147 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 364 TLPEPLSSLKSHLAVQGLSVLAEVCPT 390
            +P+ ++      A++GL+V    C T
Sbjct: 172 WIPKRIAG-----ALEGLAVAYVSCGT 193


>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
          Length = 547

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 129/271 (47%), Gaps = 38/271 (14%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++   ++ G +  G LGHG +T Q    T ++  S   +++ S  +NH   V   G+ 
Sbjct: 85  LGADGRCYTWGRNEKGQLGHG-DTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKA 143

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTA---GLNFTGFLT-IRGH-V 237
           F+ G N     G       I      E L  VPC   +VTA   G +FT +L+ + G  +
Sbjct: 144 FSFGHNKYGQLGTGSLRNEI------ETLP-VPCLVTEVTAAVCGGDFTVWLSSVEGSSI 196

Query: 238 HTCGSNTHGQLGHG-----DTLD---------RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            T G   +GQLGHG     +T D         +P P++IA L E  ++V++A G ++ +A
Sbjct: 197 LTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEK-TIVKVACGTNHTVA 255

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSS 341
           V  +G VY++G G    LGH EQ DE QPR ++ F++  +      VSAG          
Sbjct: 256 VDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTAGG 315

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G +Y WGK        GD  D   P+PL  L
Sbjct: 316 GQLYMWGK----MKNTGD--DWMYPKPLMDL 340



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 76/235 (32%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGF----LTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           +  P  +  L GV  + V +G   T F    L   G  +T G N  GQLGHGDT+ R  P
Sbjct: 56  LLSPSRLRPLVGVDIRSVASGC--TAFHCVALGADGRCYTWGRNEKGQLGHGDTVQRDLP 113

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF--------GSGS-------------- 297
             ++ L +   +++ + G ++ + VT +G  +SF        G+GS              
Sbjct: 114 TIVSELSKY-KIIKASIGKNHTVVVTDDGKAFSFGHNKYGQLGTGSLRNEIETLPVPCLV 172

Query: 298 ----------NFC---------------------LGHGEQHD--------------ELQP 312
                     +F                      LGHG  ++              + +P
Sbjct: 173 TEVTAAVCGGDFTVWLSSVEGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRP 232

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           RAI     K I  V+V+ G  H VA+DSSG+VYTWG G  G LGH ++ D+  P 
Sbjct: 233 RAIAVLSEKTI--VKVACGTNHTVAVDSSGFVYTWGFGGYGRLGHREQKDEWQPR 285



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGH 357
            +G G Q + L P  ++     G+ +  V++G    H VAL + G  YTWG+   G LGH
Sbjct: 47  AVGGGIQGNLLSPSRLRPL--VGVDIRSVASGCTAFHCVALGADGRCYTWGRNEKGQLGH 104

Query: 358 GDEIDKTLPEPLSSLKSHLAVQ 379
           GD + + LP  +S L  +  ++
Sbjct: 105 GDTVQRDLPTIVSELSKYKIIK 126


>gi|440796277|gb|ELR17386.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1595

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 9/206 (4%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 222
            V++V  +      + +SG+V+  G +S F    +D  T  P   P  + ALKG     V 
Sbjct: 1361 VIKVGCASGFNVALSRSGKVYGWGSSSLFPLRTKDNRTATPGI-PHTIRALKGKRVVDVA 1419

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYM 281
             G +   F+T +G V++ G+   G LG G T+D+   PK I  L++    V+ AAG ++ 
Sbjct: 1420 CGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQK-EHAVRAAAGENFS 1478

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +GVVYSFG+     LGH +  D     P  I    +  I + +++AG +H +A+ 
Sbjct: 1479 MVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAK--IKITKIAAGHQHAMAIS 1536

Query: 340  SSGYVYTWGKGYCGALGHGDEIDKTL 365
              G VY WG    G LG   E D+ L
Sbjct: 1537 EYGEVYLWGANDAGQLGFETEDDEQL 1562



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            VV V+  E+H  F+   G+V++ G       G   T   +  P+ + AL+     +  AG
Sbjct: 1415 VVDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQKEHAVRAAAG 1474

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYML 282
             NF+  LT  G V++ G+   GQLGH D  D PT  P  I  L ++  + +IAAG  + +
Sbjct: 1475 ENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKI-KITKIAAGHQHAM 1533

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A++  G VY +G+     LG   + DE L PR +      G+ VV  + G  H V +D +
Sbjct: 1534 AISEYGEVYLWGANDAGQLGFETEDDEQLVPRHLPF----GLPVVDAAGGKSHTVIIDQA 1589

Query: 342  GYVYTW 347
            G VY W
Sbjct: 1590 GRVYAW 1595



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 101/220 (45%), Gaps = 15/220 (6%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGD-----NSSFCCGHRDTNRPIFRPRLVEAL--KGVP 217
            VV V+ S  HA F+++SG V+T  D     NS               P  V  L  KG  
Sbjct: 1301 VVDVACSSTHALFLVESGDVYTVADKLVESNSIPVAQPHRKGDGALTPHQVPQLQKKGRR 1360

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIA 275
              +V     F   L+  G V+  GS++   L   D  T     P +I  L+    VV +A
Sbjct: 1361 VIKVGCASGFNVALSRSGKVYGWGSSSLFPLRTKDNRTATPGIPHTIRALKG-KRVVDVA 1419

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEH 334
             G  ++L +TG G VYS G+G    LG G   D+L +P+ I   +++  H VR +AG+  
Sbjct: 1420 CGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQKE--HAVRAAAGENF 1477

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLSSL 372
             + L   G VY++G    G LGH D  D     P P+ +L
Sbjct: 1478 SMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDAL 1517



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 4/182 (2%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + +  G +H L I+    V+S G+ + G LG G    Q V   +I      H V+ +A E
Sbjct: 1416 VDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQKEHAVRAAAGE 1475

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            N +  + + G V++ G       GH D  + P   P  ++AL  +   ++ AG      +
Sbjct: 1476 NFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIKITKIAAGHQHAMAI 1535

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            +  G V+  G+N  GQLG     D        P      VV  A G S+ + +   G VY
Sbjct: 1536 SEYGEVYLWGANDAGQLGFETEDDEQLVPRHLPFGL--PVVDAAGGKSHTVIIDQAGRVY 1593

Query: 292  SF 293
            ++
Sbjct: 1594 AW 1595


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 117/253 (46%), Gaps = 8/253 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S  +VF+ G +  G LG G  T +      ++FPS   +  V+A   H
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVA-VSFPSGTVITAVAAGGMH 211

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  +  +G VF  GDNS+   G    TNR    P +V    G     +  G + +  +T 
Sbjct: 212 SLALTSAGTVFAWGDNSTGQLGDGTRTNR--STPVVVGLPVGTIVTAIAGGGSHSLAVTS 269

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+    G+N  GQLG G  ++R     +  L    +V  +A G ++ LA+T  G V S+
Sbjct: 270 AGNARAWGNNFVGQLGDGSNINRDASVHVR-LPPGTTVTAVAGGLTHSLALTSVGTVLSW 328

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GS +   LG G   D   P ++      G+ +  V+AGD   +AL S+G V  WG    G
Sbjct: 329 GSNNWGQLGDGTARDRNTPGSVS--LPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVG 386

Query: 354 ALGHGDEIDKTLP 366
            LG G    +  P
Sbjct: 387 QLGDGTTTVRRTP 399



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 117/255 (45%), Gaps = 10/255 (3%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  H+L ++++ +V + G +  G LG G  T    +   +  P    V  V+A  NH+  
Sbjct: 104 GDAHSLAVTSAGTVLAWGRNAVGQLGDG-TTINRSTPVDVRLPPGTTVTAVAAGFNHSLA 162

Query: 178 VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +  +G VF  GDNS+   G    TNR    P  V    G     V AG   +  LT  G 
Sbjct: 163 LTSAGTVFAWGDNSTGQLGDGTRTNR--STPVAVSFPSGTVITAVAAGGMHSLALTSAGT 220

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS 295
           V   G N+ GQLG G   +R TP  +     VG++V  IA G S+ LAVT  G   ++G+
Sbjct: 221 VFAWGDNSTGQLGDGTRTNRSTPVVVG--LPVGTIVTAIAGGGSHSLAVTSAGNARAWGN 278

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             NF    G+  +  +  ++      G  V  V+ G  H +AL S G V +WG    G L
Sbjct: 279 --NFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQL 336

Query: 356 GHGDEIDKTLPEPLS 370
           G G   D+  P  +S
Sbjct: 337 GDGTARDRNTPGSVS 351



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 88/188 (46%), Gaps = 3/188 (1%)

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           + S  V   GDN     G   TN     P  V   KG        G   +  +T  G V 
Sbjct: 59  VASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVL 118

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G N  GQLG G T++R TP  +  L    +V  +AAG ++ LA+T  G V+++G  S 
Sbjct: 119 AWGRNAVGQLGDGTTINRSTPVDVR-LPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNST 177

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG G + +   P A+ +F   G  +  V+AG  H +AL S+G V+ WG    G LG G
Sbjct: 178 GQLGDGTRTNRSTPVAV-SFP-SGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDG 235

Query: 359 DEIDKTLP 366
              +++ P
Sbjct: 236 TRTNRSTP 243



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 8/154 (5%)

Query: 237 VHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V   G N +GQLG G T + R  P  +  L +   V   A G ++ LAVT  G V ++G 
Sbjct: 64  VLAWGDNYYGQLGDGTTNNYRTVPIPVG-LPKGTEVTAAAGGDAHSLAVTSAGTVLAWGR 122

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            +   LG G   +   P  +      G  V  V+AG  H +AL S+G V+ WG    G L
Sbjct: 123 NAVGQLGDGTTINRSTP--VDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQL 180

Query: 356 GHGDEIDKTLPE----PLSSLKSHLAVQGLSVLA 385
           G G   +++ P     P  ++ + +A  G+  LA
Sbjct: 181 GDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLA 214


>gi|145497789|ref|XP_001434883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402011|emb|CAK67486.1| unnamed protein product [Paramecium tetraurelia]
          Length = 391

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 17/205 (8%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + ++G ++T G +S  C  + D+     RPR ++A  G   ++V     FT  +T  G +
Sbjct: 18  LYRAGNLYTWGAHSLGCGINHDSQSDQLRPRRIDAFNG-NVQKVYPSEYFTAVITDNGDL 76

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +T G+N +GQLG G+T ++ TP+ +    + G  VV +A G ++ +A+  +G VY++GS 
Sbjct: 77  YTFGNNNYGQLGLGNTEEQQTPQLVKYFRDKGLKVVDVALGSNHGVALASDGNVYTWGSA 136

Query: 297 SN------FC----LGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSGYV 344
           +N       C    LG    ++ LQP+ ++      KG     VSAG  + + ++ +  V
Sbjct: 137 NNSFLDQLLCRPNGLGDNYANNLLQPQVVEKLAGSPKGKF---VSAGINYSIVVNENNQV 193

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPL 369
           Y WG G  G LG+G  ++   P+ +
Sbjct: 194 YVWGAGKRGELGNGCSLNFKYPDQI 218


>gi|325192607|emb|CCA27034.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 362

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 11/231 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+LL++ +   F+ G+   G LG G      V+ TRI   +     QV     H
Sbjct: 128 VSCGWKHSLLVTATGEAFAWGTGRHGELGLGTSILHSVNPTRI--LTRQMFQQVHCGWQH 185

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV-----EALKGVPCKQVTAGLNFTG 229
           + FV   G+V +CG N     G  D+  P++ PRL+     + +K +  KQ++ G +   
Sbjct: 186 SVFVSFDGKVSSCGSNKHGQLGTNDSLAPLYSPRLITTTESDEVKSIVVKQISVGWHHCV 245

Query: 230 FLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            +T+   V + G  +HGQLG G  D    PT   I P++   ++ Q+A G  + L +T +
Sbjct: 246 CITLGNEVLSWGKGSHGQLGIGLDDGAYTPTSILIDPIKHR-AISQVACGSEHTLLLTHD 304

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G VYS G G +  LGHG   +E  P  I  F+ + + V  V AG    +A+
Sbjct: 305 GSVYSCGWGEHGNLGHGTTTNEDIPSEILYFQDQQLAVESVRAGGAVSIAI 355



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 137/317 (43%), Gaps = 16/317 (5%)

Query: 72  AGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
           +G  R  +  +L  C  NW  V+R + +V           G + +T G   T       V
Sbjct: 34  SGSDRVQRTNILAPCAANW--VVRNVVAVACGWQNTIAITGPVNLTEG---TQSSHEHKV 88

Query: 132 FSCGSSLCGVLGHGPE--TTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCG 188
           F  GS+  G LG   E     C +   I   +  + VQ VS    H+  V  +G+ F  G
Sbjct: 89  FCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSVSCGWKHSLLVTATGEAFAWG 148

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                  G   +      P  +  L     +QV  G   + F++  G V +CGSN HGQL
Sbjct: 149 TGRHGELGLGTSILHSVNPTRI--LTRQMFQQVHCGWQHSVFVSFDGKVSSCGSNKHGQL 206

Query: 249 GHGDTL-DRPTPKSIAPLE--EVGSVV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           G  D+L    +P+ I   E  EV S+V  QI+ G  + + +T    V S+G GS+  LG 
Sbjct: 207 GTNDSLAPLYSPRLITTTESDEVKSIVVKQISVGWHHCVCITLGNEVLSWGKGSHGQLGI 266

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       P +I     K   + +V+ G EH + L   G VY+ G G  G LGHG   ++
Sbjct: 267 GLDDGAYTPTSILIDPIKHRAISQVACGSEHTLLLTHDGSVYSCGWGEHGNLGHGTTTNE 326

Query: 364 TLP-EPLSSLKSHLAVQ 379
            +P E L      LAV+
Sbjct: 327 DIPSEILYFQDQQLAVE 343



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 23/153 (15%)

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-----DRPTPKSI-APLEE---VGSVVQIAAGPSYML 282
           T  G +   GSN H QLG G  +     DR    +I AP      V +VV +A G    +
Sbjct: 9   TADGKLFAWGSNDHHQLGIGTMMQSSGSDRVQRTNILAPCAANWVVRNVVAVACGWQNTI 68

Query: 283 AVTG------------NGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTF-RRKGIHVVRV 328
           A+TG               V+ +GS     LG   +  ++  P AI  +   +   V  V
Sbjct: 69  AITGPVNLTEGTQSSHEHKVFCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSV 128

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           S G +H + + ++G  + WG G  G LG G  I
Sbjct: 129 SCGWKHSLLVTATGEAFAWGTGRHGELGLGTSI 161


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ I+ S   FS GS+  G LGHG  T   V+   +        + V+   
Sbjct: 45  ISVACGDQHSVFITASGRTFSFGSNDYGQLGHG-HTKALVNPRCVKALKDKRAILVACGR 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H        +V+  G NS    G + +      P+LV  L GV  K +TAG + +  L+
Sbjct: 104 SHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +G V+  GS+ HGQLG G    R  P     L+  G  + I+AG  +   V  +GV+Y+
Sbjct: 164 AKGIVYLWGSSEHGQLGLGRKKQRKLP---VQLKTEGKAIAISAGAYHSAYVNTDGVLYT 220

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           FG        HG+    L P+  +   +    +G+ V  V+ G  H VAL   G  Y++G
Sbjct: 221 FGETE-----HGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCDGRAYSFG 274

Query: 349 KGYCGALGHGDEI 361
            G  G LG G  +
Sbjct: 275 DGSQGQLGLGQRV 287



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 15/208 (7%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           EN    + + G VFT G  S F       N P       +A+  V C     G   + F+
Sbjct: 9   ENEDQDIPELGAVFTFG-KSKFS-----DNLPGTFWVKNDAVISVAC-----GDQHSVFI 57

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G   + GSN +GQLGHG T     P+ +  L++  +++ +A G S+ L  T +  VY
Sbjct: 58  TASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAIL-VACGRSHTLVATDDKKVY 116

Query: 292 SFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +FG  S   LG          P+ + T    G+ V  ++AG +H +AL + G VY WG  
Sbjct: 117 AFGINSEHQLGVKSSAAYHADPQLVATL--NGVQVKALTAGADHSLALSAKGIVYLWGSS 174

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LG G +  + LP  L +    +A+
Sbjct: 175 EHGQLGLGRKKQRKLPVQLKTEGKAIAI 202



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 7/193 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ V+  + H+ F+  SG+ F+ G N     GH  T + +  PR V+ALK      V  G
Sbjct: 44  VISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHT-KALVNPRCVKALKDKRAILVACG 102

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   T    V+  G N+  QLG          P+ +A L  V  V  + AG  + LA
Sbjct: 103 RSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGV-QVKALTAGADHSLA 161

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           ++  G+VY +GS  +  LG G +     P  ++T  +     + +SAG  H   +++ G 
Sbjct: 162 LSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGK----AIAISAGAYHSAYVNTDGV 217

Query: 344 VYTWGKGYCGALG 356
           +YT+G+   G LG
Sbjct: 218 LYTFGETEHGKLG 230



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)

Query: 107 VETSAGNMQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++T    + I+ G YH+  ++   V ++ G +  G LG      +C   +++  P    +
Sbjct: 193 LKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKV--PDIQGL 250

Query: 166 V-QVSASENHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           V  V+   +H   +   G+ ++ GD S      G R T+    RP L++   GV   +V+
Sbjct: 251 VTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAG--RPHLIQMPTGVKMARVS 308

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           AG + T FL+    ++TCG   HG+L   D
Sbjct: 309 AGQSHTAFLSEGRQMYTCGEGRHGKLALED 338



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 10/227 (4%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +T G  H+L +S    V+  GSS  G LG G +  + +    +   +    + +SA   H
Sbjct: 152 LTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLP---VQLKTEGKAIAISAGAYH 208

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +A+V   G ++T G+      G     +   +P  V  ++G+    V  G + T  LT  
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCD 267

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G  ++ G  + GQLG G  +       +  +     + +++AG S+   ++    +Y+ G
Sbjct: 268 GRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCG 327

Query: 295 SG--SNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            G      L  GE   ++  P  +         V +VS G  H + L
Sbjct: 328 EGRHGKLALEDGEMGSNKFSPMLVDILSL--FQVQQVSCGGCHTLVL 372



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ L  +   +S G    G LG G   T       I  P+   + +VSA ++H
Sbjct: 254 VACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSH 313

Query: 175 AAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            AF+ +  Q++TCG+      +   G   +N+  F P LV+ L     +QV+ G   T  
Sbjct: 314 TAFLSEGRQMYTCGEGRHGKLALEDGEMGSNK--FSPMLVDILSLFQVQQVSCGGCHTLV 371

Query: 231 LTIRG 235
           L + G
Sbjct: 372 LVVPG 376


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 4/240 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF  G +    LG G   +  V   ++   S   +  +S  S  H     + G+V+ 
Sbjct: 39  NDEVFVFGLNCSNCLGTGDNQSTIVP-KKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYA 97

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN+ +   ++   L      +V  G + +  L+  G V+  G N  G
Sbjct: 98  WGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCG 157

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G +  +A+  NG VY +G   N  LG G  
Sbjct: 158 QVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNN 217

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++L P  +     +G+ +++++ G  H +AL   G +Y+WG    G LG G++ ++  P
Sbjct: 218 GNQLTPCRVAAL--QGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGTGNKSNQLSP 275



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 9/219 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A ++  + +VF  G N S C G  D N+    P+ +E+L G   + ++ G      
Sbjct: 29  SANEAIYITHNDEVFVFGLNCSNCLGTGD-NQSTIVPKKLESLSGKRIRSLSYGSGPHVV 87

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T    TP  +     +  V+++A G  + LA++ +G 
Sbjct: 88  LSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGD 147

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY++G  +   +G G   ++  PR +    +  I VV ++ G    VA+  +G VY WG 
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKI-VVSIACGQTSSVAIVDNGEVYGWGY 206

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
              G LG G+  ++  P  +++L      QG+ ++   C
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAAL------QGVCIMQIAC 239



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 4/186 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V++V+   +H+  +   G V+  G N+    G   T N+P  R ++   L+      +  
Sbjct: 129 VIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPR-KVSNCLQTKIVVSIAC 187

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G V+  G N +GQLG G+  ++ TP  +A L+ V  ++QIA G ++ LA
Sbjct: 188 GQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALQGV-CIMQIACGYAHTLA 246

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G++YS+G+ +   LG G + ++L P  I   + + + +    +      A   SG 
Sbjct: 247 LTDEGLMYSWGANTYGQLGTGNKSNQLSPGQILMEKERVVEIAACHSAHTS-AAKTQSGL 305

Query: 344 VYTWGK 349
           VY WG+
Sbjct: 306 VYMWGQ 311



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H+L L S+  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 130 IEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQ 189

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  ++ +G+V+  G N +   G  +    +  P  V AL+GV   Q+  G   T  LT
Sbjct: 190 TSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALQGVCIMQIACGYAHTLALT 248

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G +++ G+NT+GQLG G+  ++ +P  I  L E   VV+IAA  S     A T +G+V
Sbjct: 249 DEGLMYSWGANTYGQLGTGNKSNQLSPGQI--LMEKERVVEIAACHSAHTSAAKTQSGLV 306

Query: 291 YSFG 294
           Y +G
Sbjct: 307 YMWG 310


>gi|29654520|ref|NP_820212.1| hypothetical protein CBU_1217 [Coxiella burnetii RSA 493]
 gi|29541787|gb|AAO90726.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493]
          Length = 497

 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 125/293 (42%), Gaps = 40/293 (13%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFP----SAAHVVQVS 169
           ++  R+  +L     ++  G ++ G LG G   E +Q     +  FP        +VQ++
Sbjct: 184 LSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLN 243

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPI-----FRPRLVEALKGVPCKQV 221
            ++ +       G V+  G N     G    +D   P+     F P   E        QV
Sbjct: 244 FADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP---EWHPDDYIIQV 300

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP-------LEEVGSVVQI 274
             G   T  LT  G+++  G N++GQLG  D  DR  P ++ P       LE    ++++
Sbjct: 301 VVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRP-ALLPWNRFPGLLERNDRIIEL 359

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-----FRRKGIHVVRVS 329
            AG +  LA T  G +Y +G+   + L  G+      P  +        RR+G H+V + 
Sbjct: 360 IAGGARSLARTEQGFIYIWGA--RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELI 417

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDE--------IDKTLPEPLSSLKS 374
           AG +H +A    GY+Y WG+ Y G LG GD         +D     PLS  ++
Sbjct: 418 AGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPPLSQWRN 470



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI-QTF----RRKGIH 324
           ++VQ+ +   +   +T  G +Y +G   +  LG G++ +  QP  + Q F      +G  
Sbjct: 179 TIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDR 238

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +V+++  D ++VA  + G+VY WG  Y G LG  DE D+  P  LS
Sbjct: 239 IVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELS 284


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 23/253 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 225 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC- 388
            HV  L  SG V+TWGKG  G LG GD  +++ P   E L        V G +  A +C 
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICL 604

Query: 389 -PTIVQEDTRSCS 400
             T+  +D   CS
Sbjct: 605 HKTMSMKDQSVCS 617



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 21/230 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVT 222
           V  ++  ENHAA + + G+V+T G   S+  G  D    +    P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 223 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 279
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                      SG ++TWG    G LGH D   K LP  + SL ++  +Q
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQ 487



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 16/179 (8%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 314
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK 419



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 20/226 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRIN------FP 160
           +I  G +HT +I++S  +F+ G    GVLGHG       P+  + +  +R+       + 
Sbjct: 373 KIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWH 432

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           +AA V  +S+ + +A     SG++FT GD      GH D    +  P  V++L      Q
Sbjct: 433 TAAIVEVMSSFKGNAP----SGKLFTWGDADRGKLGHADRKMKLL-PTCVDSLTAYDLIQ 487

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+ G   T  LT+ G V T GS+ HGQLG+             PL +   V +I++G S+
Sbjct: 488 VSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPL-KTEFVREISSGSSH 546

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T +G V+++G G+   LG G+  +   P  ++    + +  V
Sbjct: 547 VAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 592


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 20/290 (6%)

Query: 97  LQSVEHSSDIVETSAGN----MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQC 151
           +Q  + +++ V   AG     +++  G+YH+L + S  +VF+ G +  G LG G  TTQ 
Sbjct: 32  VQERDSATETVRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDG--TTQD 89

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
            +   +     A  V V+A + ++  + ++G V+  GDN+S   G   T  P  +PR V 
Sbjct: 90  KA-APVQVAGVASAVSVAAGDQYSLALDENGDVWAWGDNASGQLGD-GTLTPRAQPRRVS 147

Query: 212 AL-KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            L +GV    + +G      L   G V   G N   QLG       P P  +  L ++  
Sbjct: 148 GLTQGV---SLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDI-- 202

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            V + AG S  LA+  +G V+++G      LG G       P  +         V  +SA
Sbjct: 203 -VAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAPVRVANLD----AVTHISA 257

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           G  H +AL + G  + WG    G LG G  + +TLP  +   ++   V G
Sbjct: 258 GAYHALALRADGTAWAWGYNAFGQLGDGTTVQRTLPVLIGLTETRTVVAG 307



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 18/270 (6%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +++G  HT  +  + +V+S G++  G LG G  T +    T +  P    V  ++ 
Sbjct: 449 GITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRS---TPVQVPGLTGVTSIAT 505

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  +  +G V+  G N     G   T   + R + V+         + AG   +  
Sbjct: 506 GDYHSLALRSNGTVWGWGFNRYGQLGDGTT---VDRTQPVQVSGLTNIVSIAAGGGHSLA 562

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 288
           L   G V   G N  GQLG+G         +I P++ VG  +VV +AAG  Y LA+  +G
Sbjct: 563 LRSDGTVWAFGYNFDGQLGNG-----TRTWTILPVQAVGLGNVVSLAAGKMYSLALRADG 617

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  ++  LG G       P  +         +  ++AG  H +AL S G+V+ WG
Sbjct: 618 TVWAWGYNASGQLGVGTTQGSAVPLQVSGLS----AITSITAGTYHSLALRSDGWVWAWG 673

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             + G LG+G   ++  P  + S+ +  A+
Sbjct: 674 FNFEGQLGNGTSDNRLTPGLVVSMSNATAI 703



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQV 168
           G   I TG YH+L L SN +V+  G +  G LG G   + TQ V  + +      ++V +
Sbjct: 499 GVTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSGLT-----NIVSI 553

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   H+  +   G V+  G N     G+      I     V+A+       + AG  ++
Sbjct: 554 AAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILP---VQAVGLGNVVSLAAGKMYS 610

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N  GQLG G T     P  ++ L    ++  I AG  + LA+  +G
Sbjct: 611 LALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLS---AITSITAGTYHSLALRSDG 667

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      LG+G   + L P  + +      +   + AGD H +A+ + G ++ WG
Sbjct: 668 WVWAWGFNFEGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRADGTLWAWG 723

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
               G LG GD ++   P  +  L
Sbjct: 724 LNSHGQLGTGDTVEAWFPVQVQGL 747



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 21/267 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G YH+L + ++ +V++ G +    LG G  T+  V             V + A   H
Sbjct: 304 VVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPL----HAGMTGGVTLVAGFRH 359

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQV--TAGLNFTGFL 231
           +  +   G  ++ GDN     G  DT    F+PR+    + G+   +   T+G   T  L
Sbjct: 360 SVALGADGTAWSWGDNVFGQLG--DTT---FQPRMAPVQVTGLALGRADATSGQLHTVML 414

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G +   G N  GQLG+G   +   P    P+   G +  +++G  +  A+  +G V+
Sbjct: 415 GANGRLWAWGDNNQGQLGNGTQQNSSLPL---PVNLTG-ITSVSSGHRHTAALRLDGTVW 470

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G+     LG G + D   P  +         V  ++ GD H +AL S+G V+ WG   
Sbjct: 471 SWGTNQYGQLGDGTRTDRSTPVQVPGL----TGVTSIATGDYHSLALRSNGTVWGWGFNR 526

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LG G  +D+T P  +S L + +++
Sbjct: 527 YGQLGDGTTVDRTQPVQVSGLTNIVSI 553


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGHVHTC 240
           F+ G N+    G   T   +  P  + AL+G+    V  G       +  +T +G V+T 
Sbjct: 1   FSWGFNNDGALG-LGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTW 59

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GS   GQLGHGD+ +   P+ I  L+    +V++A G ++ + V+  G+V+++G G    
Sbjct: 60  GSGKSGQLGHGDSQNLVLPRLIVGLQS-NPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G  H+   P  +Q     G+ V +V+ G  H   +  SG+VYTWG G  G LGHGD+
Sbjct: 119 LGVGSTHNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDD 176

Query: 361 IDKTLPEPLSSL 372
             ++ P  +  L
Sbjct: 177 ASQSRPMYVKKL 188



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 5/190 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           + E H+A V + GQV+T G   S   GH D+   +  PRL+  L+  P  +V  G   T 
Sbjct: 42  SEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVL-PRLIVGLQSNPIVEVACGSAHTV 100

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            ++  G V   G    GQLG G T +   P  +  L+ V  V ++A G ++   VT +G 
Sbjct: 101 VVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGV-KVCKVACGSAHTAVVTESGH 159

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTWG 348
           VY++G G N  LGHG+  D  Q R +   +  GI+V  ++ G  H VV  +    V++WG
Sbjct: 160 VYTWGWGVNGQLGHGD--DASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWG 217

Query: 349 KGYCGALGHG 358
               G LGHG
Sbjct: 218 WDEYGQLGHG 227



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 16/232 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ GS   G LGHG      +    +   S   +V+V+    H   V ++G VF  G  
Sbjct: 56  VYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNP-IVEVACGSAHTVVVSKAGLVFAWGWG 114

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                G   T+     P  V +L GV   +V  G   T  +T  GHV+T G   +GQLGH
Sbjct: 115 HFGQLGVGSTHNS-NDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSNFCLGHGEQ--- 306
           GD   +  P  +  L  +  V  +A G ++ + V+  +  V+S+G      LGHG     
Sbjct: 174 GDDASQSRPMYVKKLHGI-YVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIF 232

Query: 307 --HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             +    PR I+  +       +++ G  + +AL S G VY +G G  G LG
Sbjct: 233 GGNKNRSPRPIKDLQ-------QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG----DEHVVALDSSGYVYT 346
           +S+G  ++  LG G       P  I     +G+ VV V+ G    ++H  A+   G VYT
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPI--IALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           WG G  G LGHGD  +  LP  +  L+S+  V+
Sbjct: 59  WGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVE 91


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 22/275 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +  G YHT  +S S     +  G+   G+LGHG + +  +   R+  P   H VV ++  
Sbjct: 320 VACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIP-KRVTGPLEGHQVVSIACG 378

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +G++FT GD +    GH D     + P+ ++ L G    +V  G+  T  +
Sbjct: 379 AWHTALITSNGKLFTFGDGTLGVLGHGDRESVAY-PKELQLLSGHKAVKVACGVWHTAAI 437

Query: 232 -------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
                        +    + T G     +LGH +      P  +A L +  + +Q+A G 
Sbjct: 438 IEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADY-NFLQVACGH 496

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S  +A+T +G V++ GS +   LG+     ++ P  ++  + +G  V  +S G  HV  L
Sbjct: 497 SLTVALTASGHVFTMGSKAYGQLGNPTSDGKV-PILVRD-KLQGETVEEISCGTHHVAVL 554

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            S   +YTWG+G  G LGHGD  D+  P  + +LK
Sbjct: 555 TSRSELYTWGRGANGRLGHGDIEDQKTPILVEALK 589



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 18/222 (8%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A V + G++FT G++S    GH   ++   +PRLV++L       V  G   T  ++
Sbjct: 273 SHIALVTRQGEIFTWGEDSGGRLGH-GFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVS 331

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           I G ++T G  TH  G LGHG  +    PK +    E   VV IA G  +   +T NG +
Sbjct: 332 ISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKL 391

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 338
           ++FG G+   LGHG++     P+ +Q     G   V+V+ G  H  A+            
Sbjct: 392 FTFGDGTLGVLGHGDRESVAYPKELQLL--SGHKAVKVACGVWHTAAIIEVNDQSGSSSN 449

Query: 339 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             SS  ++TWG G    LGH ++     P  +++L  +  +Q
Sbjct: 450 TSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQ 491



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 21/233 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +HT LI SN  +F+ G    GVLGHG    + V++ + +   S    V+V+  
Sbjct: 373 VSIACGAWHTALITSNGKLFTFGDGTLGVLGHG--DRESVAYPKELQLLSGHKAVKVACG 430

Query: 172 ENHAAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
             H A +++             S ++FT GD   +  GH +      +P  V AL     
Sbjct: 431 VWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHAN-KETYLQPTCVAALADYNF 489

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            QV  G + T  LT  GHV T GS  +GQLG+  T D   P  +    +  +V +I+ G 
Sbjct: 490 LQVACGHSLTVALTASGHVFTMGSKAYGQLGN-PTSDGKVPILVRDKLQGETVEEISCGT 548

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            ++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  ++ G
Sbjct: 549 HHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKER--HVKNIACG 599



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 4/200 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+  G++S        +   +  P+ +E+   +    +  G++    +T +G + T G
Sbjct: 229 GEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWG 288

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
            ++ G+LGHG   D   P+ +  L  + SV  +A G  +  AV+ +G +Y++G G++   
Sbjct: 289 EDSGGRLGHGFDKDYGKPRLVDSL-AITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAG 347

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + T   +G  VV ++ G  H   + S+G ++T+G G  G LGHGD
Sbjct: 348 ILGHGTDVSHSIPKRV-TGPLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGD 406

Query: 360 EIDKTLPEPLSSLKSHLAVQ 379
                 P+ L  L  H AV+
Sbjct: 407 RESVAYPKELQLLSGHKAVK 426



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 13/157 (8%)

Query: 229 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAV 284
           G + I G V   G+++ G LG      +D   PK   PLE   V  V  I  G S++  V
Sbjct: 223 GDVFIWGEVWAEGNSSDG-LGSQVPSKIDMLIPK---PLESDVVLDVNYIEPGVSHIALV 278

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G ++++G  S   LGHG   D  +PR + +     +  V  + G+ H  A+  SG +
Sbjct: 279 TRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFV--ACGEYHTCAVSISGDL 336

Query: 345 YTWGKGY--CGALGHGDEIDKTLPEPLS-SLKSHLAV 378
           YTWG G    G LGHG ++  ++P+ ++  L+ H  V
Sbjct: 337 YTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVV 373



 Score = 38.1 bits (87), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G   T+ ++ S  VF+ GS   G LG+ P +   V     +      V ++S   
Sbjct: 490 LQVACGHSLTVALTASGHVFTMGSKAYGQLGN-PTSDGKVPILVRDKLQGETVEEISCGT 548

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +H A +    +++T G  ++   GH    D   PI    LVEALK    K +  G NFT 
Sbjct: 549 HHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPI----LVEALKERHVKNIACGANFTT 604

Query: 230 FLTIRGHV 237
            + I   V
Sbjct: 605 CICIHKWV 612


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 15/267 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  H+L L +N +V S G++  G LG+G  TT   S + +      ++  ++A  
Sbjct: 207 VAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTT---SASPVGVSGLNNIKSLAAGG 263

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           NH+  +   G V   G N+    G+  T   +  P  V  L GV    V+AG++ +    
Sbjct: 264 NHSLALKSDGTVTAWGYNAYGQVGNGATAN-VLSPIAVSTLSGVTA--VSAGVSHSHAIG 320

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G +   G NT+G LG+   ++R TP +I  L   G +  +A G  + + V G+G V+
Sbjct: 321 SSNGVIWGWGLNTYGGLGNNTKVNRSTPGTI--LLTSG-LQGVAGGAQHTIYVKGDGTVW 377

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++GS +   +G G     L P  + T       ++ V+AG  H +AL ++G V+ WG+  
Sbjct: 378 AWGSNTYGQIGDGTPLRRLTPVQLSTLTG----IIAVAAGANHSLALAANGTVFAWGRNN 433

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LG G   +++LP  + +L   +A+
Sbjct: 434 HGQLGDGSTTNRSLPTQVPNLTGIVAL 460



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 23/266 (8%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VV 166
           G + +  G  H+L +  + +V++ G +  G LG   ET  C    R++ P A H    VV
Sbjct: 456 GIVALAAGATHSLALRFDGTVYAWGRNHLGQLGD--ET--CTD--RLS-PVAVHYLEKVV 508

Query: 167 QVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            +SA +NH+  + Q+G  F  G  ++   C     + R  F P + +    V    + AG
Sbjct: 509 AISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGR--FSPLISQIPGIVKGIGIAAG 566

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N T  L   G    CG N +GQLG G T D+  P    P+  + +  ++AAG +   A+
Sbjct: 567 ANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAP---VPITTLTNAARLAAGGNTSAAL 623

Query: 285 TGNGVVYSFGSGSNFCLGHG--EQHDELQP--RAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           T NG V ++G  S+  LG         + P  R +         V  + AG  H+ A+ +
Sbjct: 624 TTNGTVSTWGLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKT 683

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
            GYV++WG    G +G G  +++ LP
Sbjct: 684 DGYVHSWGLNDSGQIGDGTLVNRPLP 709



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 152/330 (46%), Gaps = 26/330 (7%)

Query: 56  LVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQ 115
           L  +A S L  + ++ AG+S +  I   N     W   L     + +++ +  ++ G + 
Sbjct: 295 LSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWG--LNTYGGLGNNTKVNRSTPGTIL 352

Query: 116 ITTG-------RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +T+G         HT+ +  + +V++ GS+  G +G G   T     T +   +   ++ 
Sbjct: 353 LTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDG---TPLRRLTPVQLSTLTGIIA 409

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           V+A  NH+  +  +G VF  G N+    G    TNR +  P  V  L G+    + AG  
Sbjct: 410 VAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSL--PTQVPNLTGIVA--LAAGAT 465

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V+  G N  GQLG     DR +P ++  LE+V   V I+AG ++ LA+  
Sbjct: 466 HSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYLEKV---VAISAGDNHSLAIHQ 522

Query: 287 NGVVYSFGSGSNFCL-GHGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYV 344
           NG  +++GS  +  L   G       P   Q     KGI    ++AG  H + L+++G  
Sbjct: 523 NGTAFAWGSDEHGQLCDSGSGSGRFSPLISQIPGIVKGI---GIAAGANHTLLLEANGTA 579

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           +  G    G LG G   DK+ P P+++L +
Sbjct: 580 WACGDNLYGQLGDGTTTDKSAPVPITTLTN 609



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 18/249 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCV------SFTRINFPSAAHVVQVSASENHAAFV 178
           L S+ +V+S G +    LG+    TQ +      SF  I  P    VV ++A  +H   +
Sbjct: 111 LKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSP-LTDVVAIAAGTHHTLAL 169

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             +G V++ G NSS   G         +   V+A+       ++AG   +  L   G V 
Sbjct: 170 KSNGTVWSWGLNSS---GQLGNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVV 226

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G+NT+GQLG+G T    +P  ++ L  + S   +AAG ++ LA+  +G V ++G  + 
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSGLNNIKS---LAAGGNHSLALKSDGTVTAWGYNAY 283

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGH 357
             +G+G   + L P A+ T       V  VSAG  H  A+ SS G ++ WG    G LG+
Sbjct: 284 GQVGNGATANVLSPIAVSTLSG----VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN 339

Query: 358 GDEIDKTLP 366
             +++++ P
Sbjct: 340 NTKVNRSTP 348



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 22/265 (8%)

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G +HTL +  + +V++ G +  G LG+G  T    S + +   +   V+ V+A   H+  
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATD---SLSPVQVSNLTGVISVAAGYYHSLA 60

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   G V+  G N+    G+   N    R + V+ L       + A    +  L   G V
Sbjct: 61  LKSDGTVWAWGLNT---YGNLGDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTV 117

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSI--------APLEEVGSVVQIAAGPSYMLAVTGNGV 289
            + G N +  LG+     +  P  +        +PL +V   V IAAG  + LA+  NG 
Sbjct: 118 WSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDV---VAIAAGTHHTLALKSNGT 174

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G  S+  LG+G      Q  A+Q         V +SAG  H +AL ++G V +WG 
Sbjct: 175 VWSWGLNSSGQLGNGTL--ATQSAAVQAVNLT--DAVAISAGAAHSLALRANGAVVSWGA 230

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKS 374
              G LG+G       P  +S L +
Sbjct: 231 NTYGQLGNGTTTTSASPVGVSGLNN 255



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + LAV  +G V++ G   +  LG+G   D L P  +Q     G  V+ V+AG  H +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSP--VQVSNLTG--VISVAAGYYHSL 59

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           AL S G V+ WG    G LG      +T P  + +L   +A+
Sbjct: 60  ALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTGVIAI 101


>gi|348683969|gb|EGZ23784.1| hypothetical protein PHYSODRAFT_311023 [Phytophthora sojae]
          Length = 625

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 12/281 (4%)

Query: 107 VETSAGNMQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSF---TRINFPSA 162
           VE +A  + + +G+YHTL+++ S+V F+ G +  G LG     +   S            
Sbjct: 132 VERAAKFVAVASGKYHTLMLTESAVVFASGDNTYGALGVAGGVSASRSAPGKVETGLDDV 191

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              V++ A+   A+F L    +       +     ++  R     R+         +  T
Sbjct: 192 GGCVKMIAASGFASFALVVLPIPDPVQRPTSKGAKQNRGRLTSLERMARGRAHSLQRMST 251

Query: 223 -AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            A L+         ++ + G   +G LGHGDT    TP+ I     +  V  ++AG  ++
Sbjct: 252 QAKLDIAMNAAAVNNLVSWGRGDYGVLGHGDTESSATPRVIKIFNSM-RVTCVSAGLHHV 310

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           L +T    VY+FG GSN  LG G+ +  L P  I +    G++VV VSAGDEH V +   
Sbjct: 311 LVLTELDGVYAFGDGSNGKLGLGDTNPRLSPARITSL--DGLNVVHVSAGDEHSVVMTGE 368

Query: 342 GY----VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            +    VY+WG G  G LGH DE+ +  P  ++  +    +
Sbjct: 369 TFFNRQVYSWGLGKNGRLGHNDELTRLKPTRVNCFRGRKVI 409



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++ S G    GVLGHG +T    +   I   ++  V  VSA  +H   + +   V+  G
Sbjct: 265 NNLVSWGRGDYGVLGHG-DTESSATPRVIKIFNSMRVTCVSAGLHHVLVLTELDGVYAFG 323

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGHVHTCGSNT 244
           D S+   G  DTN P   P  + +L G+    V+AG    +  TG       V++ G   
Sbjct: 324 DGSNGKLGLGDTN-PRLSPARITSLDGLNVVHVSAGDEHSVVMTGETFFNRQVYSWGLGK 382

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--NGV-VYSFGSGSNFCL 301
           +G+LGH D L R  P  +        V+ + AG ++ LA +    GV V+S+G+GS   L
Sbjct: 383 NGRLGHNDELTRLKPTRVNCFRGR-KVITLVAGGAHNLATSEMPRGVCVWSWGAGSYGQL 441

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GH +  D L PR++   R + I    + AG  H +A+  S  ++ WG+G      HG   
Sbjct: 442 GHRDTWDTLIPRSVDEIRYESIRY--IDAGQRHSLAISESKQLWLWGQGI-----HG--- 491

Query: 362 DKTLPEPLSSLKSHL 376
           D  +P+P +S  S L
Sbjct: 492 DYDVPDPDASSSSIL 506



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 83/214 (38%), Gaps = 25/214 (11%)

Query: 183 QVFTCGDNSSFCCGHRD---TNRPIFRPRLVEALKGVPCKQ-------------VTAGLN 226
           Q +T G+    C    D   T +P+  P + E ++    K              V +G  
Sbjct: 87  QQYTWGNAERQCLYSEDSTTTTKPVLTPSISEKIRVHDSKDRIWTVERAAKFVAVASGKY 146

Query: 227 FTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAP-LEEVGSVVQIAAGPSYMLA 283
            T  LT    V   G NT+G LG   G +  R  P  +   L++VG  V++ A   +   
Sbjct: 147 HTLMLTESAVVFASGDNTYGALGVAGGVSASRSAPGKVETGLDDVGGCVKMIAASGFASF 206

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSG 342
                VV             G + +  +  +++   R   H + R+S   +  +A++++ 
Sbjct: 207 AL---VVLPIPDPVQRPTSKGAKQNRGRLTSLERMARGRAHSLQRMSTQAKLDIAMNAAA 263

Query: 343 Y--VYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
              + +WG+G  G LGHGD      P  +    S
Sbjct: 264 VNNLVSWGRGDYGVLGHGDTESSATPRVIKIFNS 297


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 23/253 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 372 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 430

Query: 225 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 431 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 489

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 490 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 545

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC- 388
            HV  L  SG V+TWGKG  G LG GD  +++ P   E L        V G +  A +C 
Sbjct: 546 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICL 605

Query: 389 -PTIVQEDTRSCS 400
             T+  +D   CS
Sbjct: 606 HKTMSMKDQSVCS 618



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 21/230 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVT 222
           V  ++  ENHAA + + G+V+T G   S+  G  D    +    P++VE+L  V  K V 
Sbjct: 265 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 321

Query: 223 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 279
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 322 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 380

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 381 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 438

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                      SG ++TWG    G LGH D   K LP  + SL ++  +Q
Sbjct: 439 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQ 488



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 16/179 (8%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 250 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 309

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 314
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 310 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 367

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK
Sbjct: 368 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK 420



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 20/226 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRIN------FP 160
           +I  G +HT +I++S  +F+ G    GVLGHG       P+  + +  +R+       + 
Sbjct: 374 KIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWH 433

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           +AA V  +S+ + +A     SG++FT GD      GH D    +  P  V++L      Q
Sbjct: 434 TAAIVEVMSSFKGNAP----SGKLFTWGDADRGKLGHADRKMKLL-PTCVDSLTAYDLIQ 488

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+ G   T  LT+ G V T GS+ HGQLG+             PL +   V +I++G S+
Sbjct: 489 VSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPL-KTEFVREISSGSSH 547

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T +G V+++G G+   LG G+  +   P  ++    + +  V
Sbjct: 548 VAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 593


>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
          Length = 530

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 3/198 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A +  Q+ +VF  G NSS C G  D N+    PR ++ L G   K ++ G     
Sbjct: 29  SSANEAIYTTQNNEVFVFGMNSSNCLGTGD-NQSAIMPRRLDVLCGKKIKDLSYGSGPHI 87

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L    G V++ G N + QLG+G+T+   TP  +        V+++A G  + +A+T +G
Sbjct: 88  LLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+S+G  ++  +G G   ++  PR + +  +  + VV ++AG    +A+  +G+VY WG
Sbjct: 148 EVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKV-VVSIAAGQTSSMAITDNGHVYGWG 206

Query: 349 KGYCGALGHGDEIDKTLP 366
               G LG G+  ++ +P
Sbjct: 207 YNGTGQLGLGNTGNQLMP 224



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N+ VF  G +    LG G +    +   R++      +  +S  S  H     + G+V++
Sbjct: 40  NNEVFVFGMNSSNCLGTG-DNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYS 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+ +T +     ++   L      +V  G + +  LT  G V + G N  G
Sbjct: 99  WGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++  P+ ++   +   VV IAAG +  +A+T NG VY +G      LG G  
Sbjct: 159 QVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGYNGTGQLGLGNT 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++L P   +    + + +++V  G  H +AL   G +Y WG    G LG G++ ++T+P
Sbjct: 219 GNQLMP--CRLVFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGIGNKSNQTVP 276



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 16/239 (6%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-AAHVVQVSASENHAAFVL 179
           H LL + +  V+S G +    LG+G  T Q  +  ++     +  V++V+   +H+  + 
Sbjct: 86  HILLCNEDGEVYSWGHNGYSQLGNG-NTIQGTTPVQVCMELLSKKVIKVACGSHHSMALT 144

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G+VF+ G N+S   G   T       ++  +L+      + AG   +  +T  GHV+ 
Sbjct: 145 SDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYG 204

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N  GQLG G+T ++  P  +   + V  ++Q+  G ++ LA++  GV+Y++G+ S+ 
Sbjct: 205 WGYNGTGQLGLGNTGNQLMPCRLVFAQPV-CIIQVVLGYAHSLALSDQGVLYAWGANSHG 263

Query: 300 CLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWG--KGYC 352
            LG G + ++  P  + T  R       H   +SA      A   SG VY WG  +G C
Sbjct: 264 QLGIGNKSNQTVPVKVGTNERMVEVAACHSTNISA------AKSQSGQVYMWGLCRGQC 316



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 12/155 (7%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ---IAAGPSYMLAVTG 286
           + T    V   G N+   LG GD      P+ +  L   G  ++     +GP ++L    
Sbjct: 36  YTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVL--CGKKIKDLSYGSGP-HILLCNE 92

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G VYS+G      LG+G       P  +  +   +K   V++V+ G  H +AL S G V
Sbjct: 93  DGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKK---VIKVACGSHHSMALTSDGEV 149

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAV 378
           ++WG    G +G G   ++++P  + SSL+S + V
Sbjct: 150 FSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVV 184


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 5/243 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+S G+   G LG      + +    ++  S   +  ++    H   +   G+VFT G  
Sbjct: 17  VWSWGAGTDGQLGTAKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRG 75

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
           SS   GH D    I  P+LV    G    Q  AG + +GF++  G + TCG+ + GQLGH
Sbjct: 76  SSGQLGHGDILN-ITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGH 134

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           GD +   TP  ++      SV  +A G  + L +     V  FGSG    LG      + 
Sbjct: 135 GDNMSLRTPAKVSYFSNE-SVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDGTKS 193

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
                     K + V R+SA  +H  A+ + G  ++WG+G+C   G   +  + LP  LS
Sbjct: 194 VNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRGFCA--GPDVQTPQCLPSSLS 251

Query: 371 SLK 373
             K
Sbjct: 252 FRK 254



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 124/302 (41%), Gaps = 56/302 (18%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L S+  VF+ G    G LGHG +         ++F     + Q +A  +H+ FV
Sbjct: 57  GAHVIALTSDGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDGYVITQAAAGWSHSGFV 115

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             SG +FTCG+ S    GH D N  +  P  V        K V  G+  +  L     V 
Sbjct: 116 SDSGCLFTCGNGSFGQLGHGD-NMSLRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVC 174

Query: 239 TCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
             GS   GQLG     T     P  ++ L++V  V +I+A   +  A++ +G  +S+G G
Sbjct: 175 GFGSGKRGQLGFTSDGTKSVNLPCVVSGLKDV-EVTRISANGDHSAAISADGQFFSWGRG 233

Query: 297 SNFCLGHGEQHDELQPRAIQTFRR------------------------------------ 320
             FC G   Q  +  P ++ +FR+                                    
Sbjct: 234 --FCAGPDVQTPQCLPSSL-SFRKVAVGWNHALLLTVDGEVFKLGNTLNKQPEKQQLQID 290

Query: 321 ------------KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
                        G+ V++++AG EH  A+  +G V TWG G  G LG G+  D+T P+ 
Sbjct: 291 SSEALLAKVSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQTSPQL 350

Query: 369 LS 370
           +S
Sbjct: 351 VS 352



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 2/90 (2%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G+G++  LG  +  DEL P+ +       I ++  + G  HV+AL S G V+TWG+
Sbjct: 17  VWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSISML--ACGGAHVIALTSDGKVFTWGR 74

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G  G LGHGD ++ TLP+ +S    ++  Q
Sbjct: 75  GSSGQLGHGDILNITLPKLVSFFDGYVITQ 104


>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
           [Equus caballus]
          Length = 911

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG 
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T
Sbjct: 61  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSL-RTQKIVYICCGEDHTAALT 119

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
             G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A   SSG +
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 177

Query: 345 YTWGKGYCGALGHGDEIDKTLP 366
           Y++G G  G LG G   ++  P
Sbjct: 178 YSFGLGGNGQLGTGSTSNRKSP 199



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 61  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALT 119

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 177

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 178 YSFGLGGNGQLGTGSTSNRKSPFTVK 203



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 4/161 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           QV  G   +  L+    V   G N +GQLG G D   + +P+ I  L  +   +Q+AAG 
Sbjct: 2   QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGG 60

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++   +T +G ++ +G      LG  +++D   P  +++ R + I  V +  G++H  AL
Sbjct: 61  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAAL 118

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              G V+T+G G  G LGH     +  P  +  L   +  Q
Sbjct: 119 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 159



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSA 330
           VQ+A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+A
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLL--GIPFMQVAA 58

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G  H   L  SG ++ WG+   G LG  DE D+  P  L SL++   V
Sbjct: 59  GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIV 106


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 140/306 (45%), Gaps = 34/306 (11%)

Query: 99  SVEHSSDIVETSAGN---MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
           SV HS + +E S  +   ++++ G +H+  ++ +  +F+ G +  G LG G    + VS 
Sbjct: 110 SVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVST 169

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--------F 205
            R ++  + A V  V+    H+    + G+V + G   +   GH      +        +
Sbjct: 170 PRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEY 229

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAP 264
            PRL++ L GV  K++ AG+  +  +  +G +   G  T    G  GD L RPT     P
Sbjct: 230 TPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDEL-RPTVVEEVP 288

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             E     ++A G  +   VT +G +YS+GS  N CLG G       P  +++   K   
Sbjct: 289 FSE-----EVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFK-FP 342

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYC------------GALGHGDEIDKTLPEPLSSL 372
           V +VS G +H  A+ S G +YTWG G              G LGHG+++D   P  +   
Sbjct: 343 VSKVSCGWKH-TAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFG 401

Query: 373 KSHLAV 378
           K+  AV
Sbjct: 402 KNARAV 407



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTG 286
           FLT  G V   G N  GQLG G ++      S+ P+E  G    VV+++AG  +  AVT 
Sbjct: 87  FLTESGRVFAAGLNDFGQLGIGSSVTH----SLEPIEVSGFDEKVVEVSAGNHHSCAVTA 142

Query: 287 NGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G ++++G  S+  LG G++  ++   PR +         V  V+ G EH +A    G V
Sbjct: 143 DGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADA--RVKMVALGSEHSIATTEEGEV 200

Query: 345 YTWGKGYCGALGHG 358
            +WG    G LGHG
Sbjct: 201 LSWGAAGAGRLGHG 214



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 16/208 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H  F+ +SG+VF  G N     G   +      P  V         +V+AG + +  +T 
Sbjct: 84  HTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD-EKVVEVSAGNHHSCAVTA 142

Query: 234 RGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G +   G N+ GQLG G    +   TP+ +  L +   V  +A G  + +A T  G V 
Sbjct: 143 DGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADA-RVKMVALGSEHSIATTEEGEVL 201

Query: 292 SFGSGSNFCLGHGEQ---------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           S+G+     LGHG +           E  PR I+     G+ + R++AG  H   +D  G
Sbjct: 202 SWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNL--DGVKIKRIAAGMLHSACIDEKG 259

Query: 343 YVYTWGKGYCGALGH-GDEIDKTLPEPL 369
            ++ +G+      G  GDE+  T+ E +
Sbjct: 260 TLFIFGQKTEKGFGRSGDELRPTVVEEV 287



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 13/137 (9%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG--------SVVQIAAGPSYMLAVTGNGVVYS 292
           G+  +G+LG G    R +P +  P    G            +A G ++ L +T +G V++
Sbjct: 38  GNGDYGRLGMGALESRWSP-TACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96

Query: 293 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            G      LG G      L+P  +  F  K   VV VSAG+ H  A+ + G ++ WG+  
Sbjct: 97  AGLNDFGQLGIGSSVTHSLEPIEVSGFDEK---VVEVSAGNHHSCAVTADGKLFAWGRNS 153

Query: 352 CGALGHGDEIDKTLPEP 368
            G LG G    K +  P
Sbjct: 154 SGQLGLGKRAGKVVSTP 170



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 27/143 (18%)

Query: 106 IVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRI 157
           +VE    + ++  G YHT ++++S  ++S GS+  G LG G       PE  +   F   
Sbjct: 283 VVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLF--- 339

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCG----DNSSFCCGHRDTNR-------PIFR 206
            FP    V +VS    H A V+  G ++T G    + + F  GH    +         F 
Sbjct: 340 KFP----VSKVSCGWKHTA-VISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFE 394

Query: 207 PRLVEALKGVPCKQVTAGLNFTG 229
           P +VE  K      V+ G N TG
Sbjct: 395 PMMVEFGKNARAVHVSCGFNHTG 417


>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus laevis]
          Length = 600

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 3/198 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A +  Q+ +VF  G NSS C G  D N+    PR ++ L G   K ++ G     
Sbjct: 99  SSANEAIYTTQNNEVFVFGMNSSNCLGTGD-NQSAIMPRRLDVLCGKKIKDLSYGSGPHI 157

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L    G V++ G N + QLG+G+T+   TP  +        V+++A G  + +A+T +G
Sbjct: 158 LLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 217

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+S+G  ++  +G G   ++  PR + +  +  + VV ++AG    +A+  +G+VY WG
Sbjct: 218 EVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKV-VVSIAAGQTSSMAITDNGHVYGWG 276

Query: 349 KGYCGALGHGDEIDKTLP 366
               G LG G+  ++ +P
Sbjct: 277 YNGTGQLGLGNTGNQLMP 294



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N+ VF  G +    LG G +    +   R++      +  +S  S  H     + G+V++
Sbjct: 110 NNEVFVFGMNSSNCLGTG-DNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYS 168

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+ +T +     ++   L      +V  G + +  LT  G V + G N  G
Sbjct: 169 WGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNSG 228

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++  P+ ++   +   VV IAAG +  +A+T NG VY +G      LG G  
Sbjct: 229 QVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGYNGTGQLGLGNT 288

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++L P   +    + + +++V  G  H +AL   G +Y WG    G LG G++ ++T+P
Sbjct: 289 GNQLMP--CRLVFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGIGNKSNQTVP 346



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 16/239 (6%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-AAHVVQVSASENHAAFVL 179
           H LL + +  V+S G +    LG+G  T Q  +  ++     +  V++V+   +H+  + 
Sbjct: 156 HILLCNEDGEVYSWGHNGYSQLGNG-NTIQGTTPVQVCMELLSKKVIKVACGSHHSMALT 214

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G+VF+ G N+S   G   T       ++  +L+      + AG   +  +T  GHV+ 
Sbjct: 215 SDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYG 274

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N  GQLG G+T ++  P  +   + V  ++Q+  G ++ LA++  GV+Y++G+ S+ 
Sbjct: 275 WGYNGTGQLGLGNTGNQLMPCRLVFAQPV-CIIQVVLGYAHSLALSDQGVLYAWGANSHG 333

Query: 300 CLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWG--KGYC 352
            LG G + ++  P  + T  R       H   +SA      A   SG VY WG  +G C
Sbjct: 334 QLGIGNKSNQTVPVKVGTNERMVEVAACHSTNISA------AKSQSGQVYMWGLCRGQC 386



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 12/155 (7%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ---IAAGPSYMLAVTG 286
           + T    V   G N+   LG GD      P+ +  L   G  ++     +GP ++L    
Sbjct: 106 YTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVL--CGKKIKDLSYGSGP-HILLCNE 162

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G VYS+G      LG+G       P  +  +   +K   V++V+ G  H +AL S G V
Sbjct: 163 DGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKK---VIKVACGSHHSMALTSDGEV 219

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAV 378
           ++WG    G +G G   ++++P  + SSL+S + V
Sbjct: 220 FSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVV 254


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 4/250 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  S   +  +S  S  H       G+VF+
Sbjct: 64  NDEIFVLGTNCSGCLGLG-DVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFS 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+   N  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++  P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSHL 376
            P+   K  +
Sbjct: 301 TPVVVEKDRI 310



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 4/233 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +  L  +   VFS G +  G LG+G      V        S   V +V+    H+  
Sbjct: 107 SGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLV 166

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   G+VF  G N+S   G   T       R+   L+      +  G   +  +   G V
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEV 226

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           +  G N +GQLG G + ++PTP  +A L+ +  V ++A G ++ L +T  G VY++G+ S
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGK 349
              LG G + ++  P  +   + + I +   +    H  A  +  G+VY WG+
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKDRIIEI--AACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +   + ++F  G N S C G  D  +    PR +++L  K + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCSGCLGLGDV-QSTLEPRRLDSLSDKKIACLSYGSGPHIV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V + G N +GQLG+G       P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKV-VVNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLK 373
             G LG G   ++  P  +++L+
Sbjct: 233 GNGQLGLGSSGNQPTPCRVAALQ 255



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 6/171 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQVIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPR 90

Query: 261 SIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L +   + +   +GP  +LA T  G V+S+G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSDKKIACLSYGSGPHIVLATT-EGEVFSWGHNAYGQLGNGTINHGLVPSHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
                V  V+ G  H + L S G V+ WG    G +G G   ++ +P  ++
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVT 199


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFPS 161
           IV+ +AG  Q+       +L  +  V S G++  G LGHG     + + C+    I+   
Sbjct: 39  IVQVAAGGGQLDL-----MLKKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALK 93

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCK 219
              V+ VSA E H+  V   G V+T G+      G  D  RP   P  V    L+     
Sbjct: 94  NEKVICVSAGELHSGCVTADGDVYTWGEGFCGQLGLGD-RRPHLLPEQVTLGGLEDECVS 152

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPL-EEVGS--VVQIA 275
            ++ G   T  +T  G V + G   +G L   + TLD P+ +    L + +G+   V ++
Sbjct: 153 NMSCGCRHTLVVTEEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVS 212

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG  + + +  +G +Y+FGSG++  LGHG+   +  P  +  F    + + ++SAG +  
Sbjct: 213 AGHRHSMVLDEHGGLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMS 272

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +A+ ++G VY WGK   G +G G+  D  LP  + 
Sbjct: 273 MAVSTTGDVYAWGKAKEGRIGLGNNNDICLPRKVD 307



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 77/143 (53%), Gaps = 13/143 (9%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYM-LAVTGNGVVYS 292
           + + G    GQ GHGD  D   PK +  L ++G    +VQ+AAG   + L +  +G V S
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLL--LGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLS 61

Query: 293 FGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           FG+     LGHG     +  D L+PR I   + +   V+ VSAG+ H   + + G VYTW
Sbjct: 62  FGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNE--KVICVSAGELHSGCVTADGDVYTW 119

Query: 348 GKGYCGALGHGDEIDKTLPEPLS 370
           G+G+CG LG GD     LPE ++
Sbjct: 120 GEGFCGQLGLGDRRPHLLPEQVT 142



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV-VALDSSGYVYTWG 348
           + S+G       GHG++ D  +P+ +      G+ +V+V+AG   + + L  SG V ++G
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFG 63

Query: 349 KGYCGALGHGDEIDKTL-----PEPLSSLKSHLAV 378
               GALGHG +  K L     P  + +LK+   +
Sbjct: 64  TAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVI 98


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 126/248 (50%), Gaps = 16/248 (6%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
           GR HTLL +    ++S G +  G LG G +T+   SF  I+F +  + + Q+SA  N +A
Sbjct: 97  GRNHTLLYTEQGKLYSSGGNSEGQLGLG-DTSGRTSFQEISFFNTQYKIKQLSAGSNTSA 155

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +   G++F  GDNS    G       I+  P+ ++   G P   ++ G   + F+T  G
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLE--KEAIYSTPQKIDI--GKPISWISCGYYHSAFVTQDG 211

Query: 236 HVHTCGSNTHGQLG-HGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++T G   +G+LG   D L +   P+ ++ L   G V  ++ G  + +AVT    VY+F
Sbjct: 212 ELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLS--GKVKIVSCGGEHTIAVT-EKEVYTF 268

Query: 294 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G G    LGHG    E Q P+A+    +K I  + V+ G+ H   +   G +YT+G G  
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLLYTFGDGRH 326

Query: 353 GALGHGDE 360
           G LG G+E
Sbjct: 327 GKLGLGEE 334



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 16/263 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASEN 173
           I+ G  HT+L++ N  ++  GS+  G LG   E    +S  T +    +  VV  S   N
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGL--EAGSAISKPTCVKALKSEKVVFASCGRN 99

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G++++ G NS    G  DT+       +         KQ++AG N +  LT+
Sbjct: 100 HTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYS 292
            G +   G N+ GQLG        TP+ I    ++G  +  I+ G  +   VT +G +Y+
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKI----DIGKPISWISCGYYHSAFVTQDGELYT 215

Query: 293 FGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           FG   N  LG    +     +P+ +     K   V  VS G EH +A+ +   VYT+G G
Sbjct: 216 FGEPENGKLGLPSDKLKKHKKPQRVSGLSGK---VKIVSCGGEHTIAV-TEKEVYTFGLG 271

Query: 351 YCGALGHGDEIDKT-LPEPLSSL 372
             G LGHG  I +T LP+ +  L
Sbjct: 272 QFGQLGHGTFIFETQLPKAVDVL 294



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S  + H   V  +G+++  G N+    G  +    I +P  V+ALK       + G N 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLG-LEAGSAISKPTCVKALKSEKVVFASCGRNH 100

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T   T +G +++ G N+ GQLG GDT  R + + I+       + Q++AG +   A+T +
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVD 160

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYV 344
           G ++ +G  S   LG       L+  AI +  +K   G  +  +S G  H   +   G +
Sbjct: 161 GKLFMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGEL 213

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           YT+G+   G LG           P   LK H   Q +S L+
Sbjct: 214 YTFGEPENGKLGL----------PSDKLKKHKKPQRVSGLS 244



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 6/159 (3%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGS 270
           LK      ++ G   T  +T  G ++  GSN  GQLG   G  + +PT       E+   
Sbjct: 34  LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEK--- 90

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VV  + G ++ L  T  G +YS G  S   LG G+       + I  F  +   + ++SA
Sbjct: 91  VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQ-YKIKQLSA 149

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           G     AL   G ++ WG    G LG   E   + P+ +
Sbjct: 150 GSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKI 188


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 121/259 (46%), Gaps = 17/259 (6%)

Query: 118 TGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSASENH 174
           +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS  + H
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSCGKEH 58

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G+VF  G  S    G  +     F P+ ++ L  +   QV  G   +  L+  
Sbjct: 59  SLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118

Query: 235 GHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G   SF
Sbjct: 119 GQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGT--SF 175

Query: 294 GSGSN----FCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           G GSN      L G+       +P  +     K + VV +S G EH   L   G V+T+G
Sbjct: 176 GWGSNNAGQLALSGNNAPVQRYKPVLVGAL--KTLSVVFISCGYEHTAVLTQDGKVFTFG 233

Query: 349 KGYCGALGHGDEIDKTLPE 367
               G LGH    +K  P+
Sbjct: 234 DNSYGQLGHDSTAEKRGPQ 252



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 103 IQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 162

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++        N P+  ++P LV ALK +    ++ G   T  
Sbjct: 163 AHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAV 222

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA V   G 
Sbjct: 223 LTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIE--GLVSQIDCGSYHTLAYVYTTGQ 280

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 281 VVSFGRG 287


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 126/248 (50%), Gaps = 16/248 (6%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
           GR HTLL +    ++S G +  G LG G +T+   SF  I+F +  + + Q+SA  N +A
Sbjct: 97  GRNHTLLYTEQGKLYSSGGNSEGQLGLG-DTSGRTSFQEISFFNTQYKIKQLSAGSNTSA 155

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +   G++F  GDNS    G       I+  P+ ++   G P   ++ G   + F+T  G
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLE--KEAIYSTPQKIDI--GKPISWISCGYYHSAFVTQDG 211

Query: 236 HVHTCGSNTHGQLG-HGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++T G   +G+LG   D L +   P+ ++ L   G V  ++ G  + +AVT    VY+F
Sbjct: 212 ELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLS--GKVKIVSCGGEHTIAVT-EKEVYTF 268

Query: 294 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G G    LGHG    E Q P+A+    +K I  + V+ G+ H   +   G +YT+G G  
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLLYTFGDGRH 326

Query: 353 GALGHGDE 360
           G LG G+E
Sbjct: 327 GKLGLGEE 334



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 16/263 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASEN 173
           I+ G  HT+L++ N  ++  GS+  G LG   E    +S  T +    +  VV  S   N
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGL--EAGSAISKPTCVKALKSEKVVFASCGRN 99

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G++++ G NS    G  DT+       +         KQ++AG N +  LT+
Sbjct: 100 HTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYS 292
            G +   G N+ GQLG        TP+ I    ++G  +  I+ G  +   VT +G +Y+
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKI----DIGKPISWISCGYYHSAFVTQDGELYT 215

Query: 293 FGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           FG   N  LG    +     +P+ +     K   V  VS G EH +A+ +   VYT+G G
Sbjct: 216 FGEPENGKLGLPSDKLKKHKKPQRVSGLSGK---VKIVSCGGEHTIAV-TEKEVYTFGLG 271

Query: 351 YCGALGHGDEIDKT-LPEPLSSL 372
             G LGHG  I +T LP+ +  L
Sbjct: 272 QFGQLGHGTFIFETQLPKAVDVL 294



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S  + H   V  +G+++  G N+    G  +    I +P  V+ALK       + G N 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLG-LEAGSAISKPTCVKALKSEKVVFASCGRNH 100

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T   T +G +++ G N+ GQLG GDT  R + + I+       + Q++AG +   A+T +
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVD 160

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYV 344
           G ++ +G  S   LG       L+  AI +  +K   G  +  +S G  H   +   G +
Sbjct: 161 GKLFMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGEL 213

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           YT+G+   G LG           P   LK H   Q +S L+
Sbjct: 214 YTFGEPENGKLGL----------PSDKLKKHKKPQRVSGLS 244


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 23/253 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 225 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQGLSVLAEVC- 388
            HV  L  SG V+TWGKG  G LG GD  +++ P   E L        V G +  A +C 
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICL 604

Query: 389 -PTIVQEDTRSCS 400
             T+  +D   CS
Sbjct: 605 HKTMSMKDQSVCS 617



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 21/230 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVT 222
           V  ++  ENHAA + + G+V+T G   S+  G  D    +    P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 223 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 279
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                      SG ++TWG    G LGH D   K LP  + SL ++  +Q
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQ 487



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 16/179 (8%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 314
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK 419



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 20/226 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRIN------FP 160
           +I  G +HT +I++S  +F+ G    GVLGHG       P+  + +  +R+       + 
Sbjct: 373 KIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWH 432

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           +AA V  +S+ + +A     SG++FT GD      GH D    +  P  V++L      Q
Sbjct: 433 TAAIVEVMSSFKGNAP----SGKLFTWGDADRGKLGHADRKMKLL-PTCVDSLTAYDLIQ 487

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+ G   T  LT+ G V T GS+ HGQLG+             PL +   V +I++G S+
Sbjct: 488 VSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPL-KTEFVREISSGSSH 546

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T +G V+++G G+   LG G+  +   P  ++    + +  V
Sbjct: 547 VAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 592


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 17/271 (6%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G YHT  I++S+ +++ G  +   G+LGHG + +  +    +       V+ V+   
Sbjct: 323 VACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGT 382

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-------- 224
            H+A    +G+++T GD +    GH D    ++ PR V+ L G+   +V  G        
Sbjct: 383 WHSALATSNGKLYTFGDGTYGVLGHGDRESVVY-PREVQLLSGLRTIKVACGVWHTAAIV 441

Query: 225 --LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             ++ TG       + T G     +LGHG+      P  ++ L +  +  Q+A G +  +
Sbjct: 442 EVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDY-NFHQLACGHNMTV 500

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V++ G  +   LG+    D + P  +Q  R  G  V  +S G  H V L S  
Sbjct: 501 ALTTSGHVFTMGGTAYGQLGN-PSSDGVIPCLVQD-RLVGEFVEEISCGAYHTVVLTSRN 558

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V++WG+G  G LGHGD  D+  P  + +LK
Sbjct: 559 EVFSWGRGSNGRLGHGDVEDRKAPTLIEALK 589



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 15/220 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 268 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 326

Query: 225 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 327 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 386

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 387 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 444

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                  SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 445 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSL 484



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 28/242 (11%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +++ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 376 LSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDR--ESVVYPREVQLLSGLRTIKVACG 433

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD   +  GH +    +  P  V +L      Q+
Sbjct: 434 VWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL-PTCVSSLIDYNFHQL 492

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAA 276
             G N T  LT  GHV T G   +GQLG+      P+   + P       VG  V+ I+ 
Sbjct: 493 ACGHNMTVALTTSGHVFTMGGTAYGQLGN------PSSDGVIPCLVQDRLVGEFVEEISC 546

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + + +T    V+S+G GSN  LGHG+  D   P  I+  + +  HV  +S G     
Sbjct: 547 GAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDR--HVKSISCGSNFTA 604

Query: 337 AL 338
           ++
Sbjct: 605 SI 606



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 4/171 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E    +  +Q+  G+     +T +G V T G    G+LGHG   D   P  + 
Sbjct: 254 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVE 313

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRK 321
            L  V  V  +A G  +  A+T +  +Y++G G  ++  LGHG       P+ +     +
Sbjct: 314 FL-AVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRV-VGSLE 371

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G+ V+ V+ G  H     S+G +YT+G G  G LGHGD      P  +  L
Sbjct: 372 GLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL 422


>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
           and BTB (POZ) domain containing protein 1 [Ciona
           intestinalis]
          Length = 554

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 8/258 (3%)

Query: 113 NMQITTGRYHTLLIS---NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           N+  T G+  T +I    +  V+S G++  G LG G  ++        +F S   ++ +S
Sbjct: 46  NLVFTFGQSATEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESF-SGQKIISLS 104

Query: 170 A-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A S  H   + Q G V++ G NS    G+  T+ P   P L+         Q+  G + +
Sbjct: 105 AGSGPHVLVLTQDGGVYSWGHNSYMQLGNGGTS-PGTSPSLLSRNISNKVVQIACGSHHS 163

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G V+T G N  GQ+G G T ++ +P+ +        ++ I  G +  L VT +G
Sbjct: 164 MALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSG 223

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G   N  LG G   ++  P  +     +G+ + +V  G  H +AL  +G V+ WG
Sbjct: 224 EVYSWGYNGNGQLGVGNNVNQTNPCRVAAL--QGVVIAQVVCGYAHALALTDNGVVFGWG 281

Query: 349 KGYCGALGHGDEIDKTLP 366
               G LG G++ +   P
Sbjct: 282 ANSYGQLGSGNKANTCTP 299



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 10/219 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTG 229
           S     F     +V++ G N+S C G  D N     PRL+E+  G     ++AG      
Sbjct: 54  SATEVIFTTLDEKVYSLGTNTSGCLGVGD-NSSSLEPRLLESFSGQKIISLSAGSGPHVL 112

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT  G V++ G N++ QLG+G T    +P S+        VVQIA G  + +A+T  G 
Sbjct: 113 VLTQDGGVYSWGHNSYMQLGNGGTSPGTSP-SLLSRNISNKVVQIACGSHHSMALTTEGE 171

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY++G  +   +G G   ++  PR + T       ++ ++ G    + +  SG VY+WG 
Sbjct: 172 VYTWGYNNCGQIGSGSTANQGSPRKV-TACIGNKRIIDITCGQTTSLCVTDSGEVYSWGY 230

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
              G LG G+ +++T P  +++L      QG+ +   VC
Sbjct: 231 NGNGQLGVGNNVNQTNPCRVAAL------QGVVIAQVVC 263



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 150/323 (46%), Gaps = 39/323 (12%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
           R L+S      I+  SAG     +G +  +L  +  V+S G +    LG+G  T+   S 
Sbjct: 90  RLLESFS-GQKIISLSAG-----SGPHVLVLTQDGGVYSWGHNSYMQLGNGG-TSPGTSP 142

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEA 212
           + ++   +  VVQ++   +H+  +   G+V+T G N+   CG   +     +  PR V A
Sbjct: 143 SLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNN---CGQIGSGSTANQGSPRKVTA 199

Query: 213 LKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
             G      +T G   +  +T  G V++ G N +GQLG G+ +++  P  +A L+ V  +
Sbjct: 200 CIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGV-VI 258

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            Q+  G ++ LA+T NGVV+ +G+ S   LG G + +   P  +Q   R G  V   +  
Sbjct: 259 AQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTP--LQVATRIGRVVCLAATH 316

Query: 332 DEH-VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP----LSSLKSHLA--------V 378
             H   A + SG++Y WG+             +  PEP     + L +  A         
Sbjct: 317 YSHSSAARNQSGHIYMWGQLR----------QQATPEPKPTNFTDLNAVFAGFSSPPVSW 366

Query: 379 QGLSVLAEVCPTIVQEDTRSCSD 401
           + + V +EV P++ Q  +R+ +D
Sbjct: 367 RAMIVTSEVEPSVQQSVSRAFND 389



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E++  V       + ++  T +  VYS G+ ++ CLG G+    L+PR +++F   G  +
Sbjct: 43  EKINLVFTFGQSATEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESF--SGQKI 100

Query: 326 VRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           + +SAG   HV+ L   G VY+WG      LG+G     T P  LS   S+  VQ
Sbjct: 101 ISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQ 155


>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
 gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
          Length = 400

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 140/307 (45%), Gaps = 34/307 (11%)

Query: 99  SVEHSSDIVETSAGN---MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
           SV HS + +E S  +   ++++ G +H+  ++ +  +F+ G +  G LG G    + VS 
Sbjct: 85  SVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVST 144

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--------F 205
            R ++  + A V  V+    H+    + G+V + G   +   GH      +        +
Sbjct: 145 PRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEY 204

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAP 264
            PRL++ L GV  K++ AG+  +  +  +G +   G  T    G  GD L RPT     P
Sbjct: 205 TPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDEL-RPTVVEEVP 263

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             E     ++A G  +   VT +G +YS+GS  N CLG G       P  +++   K   
Sbjct: 264 FSE-----EVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFK-FP 317

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYC------------GALGHGDEIDKTLPEPLSSL 372
           V +VS G +H  A+ S G +YTWG G              G LGHG+++D   P  +   
Sbjct: 318 VSKVSCGWKH-TAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFG 376

Query: 373 KSHLAVQ 379
           K+  AV 
Sbjct: 377 KNARAVH 383



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTG 286
           FLT  G V   G N  GQLG G ++      S+ P+E  G    VV+++AG  +  AVT 
Sbjct: 62  FLTESGRVFAAGLNDFGQLGIGSSVTH----SLEPIEVSGFDEKVVEVSAGNHHSCAVTA 117

Query: 287 NGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G ++++G  S+  LG G++  ++   PR +         V  V+ G EH +A    G V
Sbjct: 118 DGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADA--RVKMVALGSEHSIATTEEGEV 175

Query: 345 YTWGKGYCGALGHG 358
            +WG    G LGHG
Sbjct: 176 LSWGAAGAGRLGHG 189



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 27/143 (18%)

Query: 106 IVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRI 157
           +VE    + ++  G YHT ++++S  ++S GS+  G LG G       PE  +   F   
Sbjct: 258 VVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLF--- 314

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCG----DNSSFCCGHRDTNR-------PIFR 206
            FP    V +VS    H A V+  G ++T G    + + F  GH    +         F 
Sbjct: 315 KFP----VSKVSCGWKHTA-VISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFE 369

Query: 207 PRLVEALKGVPCKQVTAGLNFTG 229
           P +VE  K      V+ G N TG
Sbjct: 370 PMMVEFGKNARAVHVSCGFNHTG 392


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+    +K  P+
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQ 280



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 6/196 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGALG 356
            G  + WG    G L 
Sbjct: 199 CGTSFGWGSNSAGQLA 214



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLK 373
           SL+
Sbjct: 177 SLE 179


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 46/315 (14%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I  N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1156 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1214

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 215
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G               
Sbjct: 1215 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQVGRGRAAGAG 1273

Query: 216  -VPCK-------QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE- 266
               C+       Q++ G   +  +T  G + T G+  +G+LG G+T ++  P+ +A LE 
Sbjct: 1274 LCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEG 1333

Query: 267  -EVGSVVQIAAGPSYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--- 321
             ++G V  +A G ++ L V+ +G +V++FG G    LG G    +  P+      +    
Sbjct: 1334 YQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 322  ----------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
                      GI + +V+ G +  VAL   G V+T+G+     L      +   P+ L +
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPA 1453

Query: 372  LKSHLAVQGLSVLAE 386
            L S + VQ ++V AE
Sbjct: 1454 L-SGVHVQDVAVGAE 1467



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 121/278 (43%), Gaps = 44/278 (15%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGP----------ETTQCVSFTRINFPSAAHV----- 165
            H++ ++ S  VFS G    G LGHG           E  Q     ++    AA       
Sbjct: 1218 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRC 1277

Query: 166  -------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                   +Q+S    H+A V   G++FT G+      G  +T+     P  V AL+G   
Sbjct: 1278 RSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQI 1336

Query: 219  KQVT---AGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPL-------EE 267
             QV     GLN T  ++  G  V   G   +G+LG G++  + +P+  A +       +E
Sbjct: 1337 GQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQE 1396

Query: 268  VG-------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +        S+ ++A G  + +A+T +G V++FG      L      +  +P+ +     
Sbjct: 1397 LKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPAL-- 1454

Query: 321  KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G+HV  V+ G EH +AL S+G VY WG    G LG G
Sbjct: 1455 SGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 1492



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 23/180 (12%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 1155 QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 1214

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR----------------- 319
               + +A+T +G V+S+G G    LGHG    + +PR I+  +                 
Sbjct: 1215 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGL 1274

Query: 320  ---RKGIHV-VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
               R  +H+ +++S G +H   + + G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 1275 CRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGY 1334



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 101/247 (40%), Gaps = 31/247 (12%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            +Q++ G  H+ +++ +  +F+ G+   G LG G       PE    +   +I       V
Sbjct: 1285 LQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQI-----GQV 1339

Query: 166  VQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRP-------IFRPRLVEALK- 214
              V+   NH   V   G +   F  GD      G+             +  P L + LK 
Sbjct: 1340 ANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKV 1399

Query: 215  ----GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
                G+  K+V  G  F+  LT  G V T G +    L      +   P+ +  L  V  
Sbjct: 1400 DVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGV-H 1458

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            V  +A G  + LA++  G VY++GS S   LG G  +   +P  +   + K IH  +VSA
Sbjct: 1459 VQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIH--QVSA 1516

Query: 331  GDEHVVA 337
            G  H  A
Sbjct: 1517 GRCHSAA 1523



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 7/145 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G+  HGQL   G  +  PT    AP        Q+  G +    +  NG V + G 
Sbjct: 1124 VFLWGAGRHGQLAEAGRNILVPT---TAP--SFSQAQQVVCGQNCTFVIQPNGTVLACGE 1178

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1179 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1238

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQ 379
            LGHG+   +  P  + +L+    VQ
Sbjct: 1239 LGHGNSDRQRRPRQIEALQGEEVVQ 1263


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 19/274 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  ++L I  +  +F+ G +  G LGH PET      +++   +  ++VQ +    H
Sbjct: 43  VVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWH 102

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 227
              V   G+ +  G N    CG       DT RP+ R  ++       +  +QV AG   
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTH 162

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  GHV + G         GD      P  +  LE V     IA G  + LA+  +
Sbjct: 163 SVVLTREGHVWSWGQ----PWPPGDIKQISVPVRVQGLERV---RLIAVGAFHNLALQED 215

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G ++++G+     LG G+     QP  +Q     G+ +V ++AG  H  AL   G VY W
Sbjct: 216 GTLWAWGNNEYGQLGTGDTQPRSQPITVQGL--SGLTLVDIAAGGWHSTALTDDGEVYGW 273

Query: 348 GKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQ 379
           G+G  G LG G  D+  K +P+ ++ L     VQ
Sbjct: 274 GRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQ 307



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 113/276 (40%), Gaps = 37/276 (13%)

Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + + SSV + GS   G LG G  E  + V   +   P     V V+ S N  A +   G+
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSV-VAGSRNSLA-ICDDGK 58

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 244 THGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSG 296
            +GQ G      D   RP  + I   +   S   V Q+AAG ++ + +T  G V+S+G  
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQ- 177

Query: 297 SNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGY 351
                          P  I+      R +G+  VR ++ G  H +AL   G ++ WG   
Sbjct: 178 ------------PWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNE 225

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEV 387
            G LG GD   ++ P         + VQGLS L  V
Sbjct: 226 YGQLGTGDTQPRSQP---------ITVQGLSGLTLV 252



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
           Q+  G  H+++++    V+S G          P   + +S   R+       ++ V A  
Sbjct: 155 QVAAGGTHSVVLTREGHVWSWGQPWP------PGDIKQISVPVRVQGLERVRLIAVGAFH 208

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           N A  + + G ++  G+N     G  DT +P  +P  V+ L G+    + AG   +  LT
Sbjct: 209 NLA--LQEDGTLWAWGNNEYGQLGTGDT-QPRSQPITVQGLSGLTLVDIAAGGWHSTALT 265

Query: 233 IRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGV 289
             G V+  G   HG+LG GD     +  P+ +  L  VG  +VQ++ G ++ +A+T +G 
Sbjct: 266 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLL--VGEDIVQVSCGGTHSVALTRDGR 323

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAI 315
           +Y+FG G +  LG+G +    QP  +
Sbjct: 324 MYTFGRGDHGRLGYGRKVTTGQPMEV 349


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 17/271 (6%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G YHT  I++S+ +++ G  +   G+LGHG + +  +    +       V+ V+   
Sbjct: 185 VACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGT 244

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-------- 224
            H+A    +G+++T GD +    GH D    ++ PR V+ L G+   +V  G        
Sbjct: 245 WHSALATSNGKLYTFGDGTYGVLGHGDRESVVY-PREVQLLSGLRTIKVACGVWHTAAIV 303

Query: 225 --LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             ++ TG       + T G     +LGHG+      P  ++ L +  +  Q+A G +  +
Sbjct: 304 EVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDY-NFHQLACGHNMTV 362

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V++ G  +   LG+    D + P  +Q  R  G  V  +S G  H V L S  
Sbjct: 363 ALTTSGHVFTMGGTAYGQLGN-PSSDGVIPCLVQD-RLVGEFVEEISCGAYHTVVLTSRN 420

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V++WG+G  G LGHGD  D+  P  + +LK
Sbjct: 421 EVFSWGRGSNGRLGHGDVEDRKAPTLIEALK 451



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 15/220 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 130 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 188

Query: 225 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 189 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 248

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 249 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 306

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                  SS  ++TWG G    LGHG++    LP  +SSL
Sbjct: 307 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSL 346



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 28/242 (11%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +++ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 238 LSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDR--ESVVYPREVQLLSGLRTIKVACG 295

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD   +  GH +    +  P  V +L      Q+
Sbjct: 296 VWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL-PTCVSSLIDYNFHQL 354

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAA 276
             G N T  LT  GHV T G   +GQLG+      P+   + P       VG  V+ I+ 
Sbjct: 355 ACGHNMTVALTTSGHVFTMGGTAYGQLGN------PSSDGVIPCLVQDRLVGEFVEEISC 408

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + + +T    V+S+G GSN  LGHG+  D   P  I+  + +  HV  +S G     
Sbjct: 409 GAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDR--HVKSISCGSNFTA 466

Query: 337 AL 338
           ++
Sbjct: 467 SI 468



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 4/171 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E    +  +Q+  G+     +T +G V T G    G+LGHG   D   P  + 
Sbjct: 116 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVE 175

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRK 321
            L  V  V  +A G  +  A+T +  +Y++G G  ++  LGHG       P+ +     +
Sbjct: 176 FL-AVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRV-VGSLE 233

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           G+ V+ V+ G  H     S+G +YT+G G  G LGHGD      P  +  L
Sbjct: 234 GLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL 284


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 14/268 (5%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G  ++  G  H+L I  + +V++ GS+  G LG G  + + V    +    A   V V+A
Sbjct: 33  GKSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDA---VLVAA 89

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H+  +   G  +  G N S   G   T R   RP  V  L     + V AG   +  
Sbjct: 90  GSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRT-RPVQVTGLS--EAEAVAAGDGHSLV 146

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G V   G N+ GQLG G T +R  P  +A L      V++AAG  + LAV  +G V
Sbjct: 147 VRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLS---GGVKVAAGDGHSLAVCLDGTV 203

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G   +  LG G       P  +Q     G  VV V+AG  H +A+ S G V+ WG+ 
Sbjct: 204 WAWGRNDSGQLGDGTTVQRSAP--VQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRN 259

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G LG G    +  P  ++ L   +AV
Sbjct: 260 SDGQLGDGTTSARLTPVQVTGLSGGVAV 287



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 22/273 (8%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G +H+L + S+ +V++ G +  G LG G  T    S T +     +    V+
Sbjct: 282 SGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMT---ASLTPVQAIGLSEGEAVA 338

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           A E H+      G V+  G+N     G R   + +    P  V AL G     V AG   
Sbjct: 339 AGETHSLVARSDGTVWAWGNN---IEGQRGDGSAKTSTAPVQVTALSG--GFTVAAGKAH 393

Query: 228 TGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              L +R  G V   G N  GQLG G  + R  P  +  L      V +AAG  + L + 
Sbjct: 394 A--LAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLS---GGVAVAAGDDHSLGLC 448

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++G  ++  LG G      +P  +Q     G  VV V+AG  H +A+ S G V+
Sbjct: 449 LDGTVWAWGQNTSGQLGDGTTAQ--RPAPVQVTELSG--VVAVAAGTSHSLAVSSDGTVW 504

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            WG    G LG G    +  P  ++ L   +AV
Sbjct: 505 AWGSNASGQLGDGTTRARLTPVQVAGLSGVVAV 537



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 136/330 (41%), Gaps = 60/330 (18%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S + S+  V+ +A  G   +  G+ H L + S+ +V++ G +L G LG G   T+     
Sbjct: 368 SAKTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDG---TRMQRTA 424

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK 214
            +     +  V V+A ++H+  +   G V+  G N+S   G   T  RP   P  V  L 
Sbjct: 425 PVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPA--PVQVTELS 482

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           GV    V AG + +  ++  G V   GSN  GQLG G T  R TP  +A L     VV +
Sbjct: 483 GVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAGLS---GVVAV 537

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP---------------------- 312
           AAG  + LAV  +G V+++G+ S F LG G       P                      
Sbjct: 538 AAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVL 597

Query: 313 RAIQTFRRKGIHV------------------------VRVSAGDEHVVALDSSGYVYTWG 348
           R+  T    G +                         V V+AGD   +A+ S G V  WG
Sbjct: 598 RSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLSGGVAVAAGDFQSLAVRSDGTVRAWG 657

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               G LG G    +  P  ++ L   +AV
Sbjct: 658 DNIYGQLGDGTVTTRLAPVGVNGLSGGMAV 687



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 118/271 (43%), Gaps = 18/271 (6%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G +++  G  H+L +  + +V++ G +  G LG G    +      +     + VV V+
Sbjct: 182 SGGVKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAP---VQVAGLSGVVAVA 238

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  +H+  V   G V+  G NS    G   T      P  V  L G     V AG+  + 
Sbjct: 239 AGSSHSLAVRSDGTVWAWGRNSDGQLGD-GTTSARLTPVQVTGLSG--GVAVAAGMFHS- 294

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +R  G V   G NT GQLG G      TP     L E  +V   AAG ++ L    +
Sbjct: 295 -LAVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAV---AAGETHSLVARSD 350

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G+      G G       P  +Q     G   V  +AG  H +A+ S G V+ W
Sbjct: 351 GTVWAWGNNIEGQRGDGSAKTSTAP--VQVTALSGGFTV--AAGKAHALAVRSDGTVWAW 406

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G+   G LG G  + +T P  ++ L   +AV
Sbjct: 407 GQNLFGQLGDGTRMQRTAPVQVTGLSGGVAV 437



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 113/252 (44%), Gaps = 20/252 (7%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L +S + +V++ GS+  G LG G   T     T +     + VV V+
Sbjct: 482 SGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDG---TTRARLTPVQVAGLSGVVAVA 538

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A   H+  V   G V+  G+NS F  G   +T RP   P  V  L G     V A   + 
Sbjct: 539 AGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPT--PVRVPGLSG----GVAAAAGYF 592

Query: 229 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             L +R  G V   G+N +GQLG+G      +P  +  L      V +AAG    LAV  
Sbjct: 593 HSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLS---GGVAVAAGDFQSLAVRS 649

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V ++G      LG G     L P  +          + V+AG+   +A+ S G ++ 
Sbjct: 650 DGTVRAWGDNIYGQLGDGTVTTRLAPVGVNGLSGG----MAVAAGNGFSLAVHSGGMLHA 705

Query: 347 WGKGYCGALGHG 358
           WG    G LGHG
Sbjct: 706 WGYNTDGQLGHG 717



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 119/282 (42%), Gaps = 15/282 (5%)

Query: 99  SVEHSSDI-VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+ S+ + V   +G + +  G  H+L + S+ +V++ G +  G LG G   T     T 
Sbjct: 219 TVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDG---TTSARLTP 275

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +     +  V V+A   H+  V   G V+  G N+    G       +  P  V+A+   
Sbjct: 276 VQVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASL-TP--VQAIGLS 332

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + V AG   +      G V   G+N  GQ G G       P  +  L        +AA
Sbjct: 333 EGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALS---GGFTVAA 389

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ LAV  +G V+++G      LG G +     P  +          V V+AGD+H +
Sbjct: 390 GKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGG----VAVAAGDDHSL 445

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            L   G V+ WG+   G LG G    +  P  ++ L   +AV
Sbjct: 446 GLCLDGTVWAWGQNTSGQLGDGTTAQRPAPVQVTELSGVVAV 487


>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
          Length = 791

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 26/252 (10%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF--TRINFP--------SAAHVVQ 167
           GR HTL+ + S  +F+CGS   G LG G      +S     +N P        S + +VQ
Sbjct: 96  GRAHTLICTGSQKIFACGSDQEGQLGRG------ISAIGDSVNTPVLVYDSGLSGSKIVQ 149

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++A  +H+  +   G VF  G N     G  D +  + +P  V   +  P KQ++AG   
Sbjct: 150 IAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPE--PVKQISAGYYH 207

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVT 285
           + FLT  G V+ CG +  G+LG    +D      +AP  ++     V +A G  + + + 
Sbjct: 208 STFLTESGLVYVCGESESGKLG----IDASFSTQVAPKQMQLPSPAVHVACGGHHTVILA 263

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            NG +Y  GS S+  LG G    EL  P+ +     +   + R+S G+ H   +  SG +
Sbjct: 264 ENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTESGKL 323

Query: 345 YTWGKGYCGALG 356
           YT G G  G LG
Sbjct: 324 YTCGDGRHGKLG 335



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 105/232 (45%), Gaps = 33/232 (14%)

Query: 146 PETTQCVSFTRINFPS--AAH-------VVQVSASENHAAFVLQSGQVFTCGDNS--SFC 194
           PET    +  R  F    A+H       V+ ++  + H+A + Q+G++F  G N      
Sbjct: 10  PETGAVFTIGRSRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLG 69

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---- 250
            GH++    I +P  V+ALK      V  G   T   T    +  CGS+  GQLG     
Sbjct: 70  LGHKNH---ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISA 126

Query: 251 -GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
            GD+++ P     + L   GS +VQIAAG  + LA+T +G V+++GS     LG      
Sbjct: 127 IGDSVNTPVLVYDSGL--SGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLG------ 178

Query: 309 ELQPRAIQTFRRKGIH----VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            L   +    +   +H    V ++SAG  H   L  SG VY  G+   G LG
Sbjct: 179 -LPDVSGLVNKPTKVHIPEPVKQISAGYYHSTFLTESGLVYVCGESESGKLG 229



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 17/169 (10%)

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQ 273
           P   +T G   +  +   G +   GSN  GQLG  H + + +P+  K++ P      V  
Sbjct: 37  PVLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHISKPSCVKALKPER----VTH 92

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQ-PRAIQTFRRKGIHVVRVSA 330
           +A G ++ L  TG+  +++ GS     LG G     D +  P  +      G  +V+++A
Sbjct: 93  VACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYDSGLSGSKIVQIAA 152

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDE---IDKT----LPEPLSSL 372
           G  H +AL S G V+ WG    G LG  D    ++K     +PEP+  +
Sbjct: 153 GSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVKQI 201


>gi|164685942|ref|ZP_01946867.2| hypothetical protein A35_A1226 [Coxiella burnetii 'MSU Goat Q177']
 gi|164601463|gb|EAX32495.2| hypothetical protein A35_A1226 [Coxiella burnetii 'MSU Goat Q177']
          Length = 375

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 32/277 (11%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFP----SAAHVVQVS 169
           ++  R+  +L     ++  G ++ G LG G   E +Q     +  FP        +VQ++
Sbjct: 62  LSDYRHAFILTEEGGIYGWGFNISGELGLGYRFERSQPTELPQNFFPYLLERGDRIVQLN 121

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPI-----FRPRLVEALKGVPCKQV 221
            ++ +       G V+  G N     G    +D   P+     F P   E        QV
Sbjct: 122 FADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP---EWHPDDYIIQV 178

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP-------LEEVGSVVQI 274
             G   T  LT  G+++  G N++GQLG  D  DR  P ++ P       LE    ++++
Sbjct: 179 VVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRP-ALLPWNRFPGLLERNDRIIEL 237

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-----FRRKGIHVVRVS 329
            AG +  LA T  G +Y +G+   + L  G+      P  +        RR+G H+V + 
Sbjct: 238 IAGGARSLARTEQGFIYIWGA--RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELI 295

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           AG +H +A    GY+Y WG+ Y G LG GD   +  P
Sbjct: 296 AGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQP 332



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI-QTF----RRKGIH 324
           ++VQ+ +   +   +T  G +Y +G   +  LG G + +  QP  + Q F      +G  
Sbjct: 57  TIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGYRFERSQPTELPQNFFPYLLERGDR 116

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +V+++  D ++VA  + G+VY WG  Y G LG  DE D+  P  LS
Sbjct: 117 IVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELS 162


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 21/255 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  ++L I  +  +F+ G +  G LGH PET    S   +   +   +VQ +    H
Sbjct: 46  VVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWH 105

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---------RDTNRPIFRPRLVEALKGVPCKQVTAGL 225
              V   G+ +  G N    CG          R   R I  P+   ALK +  +QV AG 
Sbjct: 106 CLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRC-ALK-LKVQQVAAGG 163

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  LT  GHV T G         GD     TP  +  LE+   V+ IA G  + LA++
Sbjct: 164 THSVVLTQEGHVWTWGQ----PWPPGDIKQISTPVRVQGLEK---VMMIAVGAFHNLALS 216

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            + V++++G+     LG G+     QP  ++     G+ +V ++AG  H  AL   G VY
Sbjct: 217 EDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGL--SGLSLVDIAAGGWHSTALTKDGEVY 274

Query: 346 TWGKGYCGALGHGDE 360
            WG+G  G LG GD+
Sbjct: 275 AWGRGEHGRLGFGDD 289



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 12/182 (6%)

Query: 114 MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M I  G +H L +S  +V ++ G++  G LG G +T       R+   S   +V ++A  
Sbjct: 203 MMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIG-DTQPRSQPIRVEGLSGLSLVDIAAGG 261

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G+V+  G       G  D       P  V+ L G    QV+ G   +  LT
Sbjct: 262 WHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALT 321

Query: 233 IRGHVHTCGSNTHGQLGHGDT----------LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             G + + G   HG+LG+G            L+ P PK+ A  + +     +A G  + L
Sbjct: 322 SDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTL 381

Query: 283 AV 284
           A+
Sbjct: 382 AI 383



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 7/121 (5%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GS   GQLG G   ++     +A L+   +V  + AG    LA+  +G ++++G  
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDWAHRVAALDPY-AVSAVVAGSRNSLAICDDGRLFTWGWN 68

Query: 297 SNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GYC 352
               LGH  E   E  P  ++     G+ +V+ + G  H +A+D  G  Y WG    G C
Sbjct: 69  QRGTLGHPPETKTESSPAPVEAL--AGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 126

Query: 353 G 353
           G
Sbjct: 127 G 127


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+    +K  P+
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQ 280



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 9/217 (4%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKS 374
            G  + WG    G L   G    +    P  + +LK+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKN 235



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLK 373
           SL+
Sbjct: 177 SLE 179


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 105/221 (47%), Gaps = 17/221 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G
Sbjct: 269 VHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACG 327

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 328 EYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHS 386

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+   
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAIIEV 444

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
                   SS  ++TWG G    LGHG +    LP  +S+L
Sbjct: 445 MSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSAL 485



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  +S S  +F+ G      G+LGHG E +  +   R++ P     V+ V+  
Sbjct: 324 VACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIP-KRVSGPLEGLQVLSVACG 382

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 229
             H+A    +G++FT GD +    GH D    +  PR V+ L G+   +V  G+  T   
Sbjct: 383 TWHSALATSNGKLFTFGDGTFGVLGHGD-RESVPYPREVQILSGLKTIKVACGVWHTAAI 441

Query: 230 --FLTIRG------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              ++  G       + T G     +LGHG       P  ++ L +  +  Q+A G +  
Sbjct: 442 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDY-NFHQLACGHTMT 500

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  +   LG+      L P  +Q  +  G  V  +S G  HV  L S 
Sbjct: 501 VALTTSGHVFTMGGTAYGQLGNPLSDGRL-PCLVQD-KLVGEFVEEISCGAYHVAVLTSR 558

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWG+G  G LGHGD  D+  P  + +LK
Sbjct: 559 SEVFTWGRGANGRLGHGDTEDRRSPTFVEALK 590



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHG--DRESVPYPREVQILSGLKTIKVACG 434

Query: 172 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A ++    QSG      ++FT GD      GH  +      P  V AL      Q+
Sbjct: 435 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 493

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 494 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 551

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 552 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 597



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G+     +T +G V T G  + G+LGHG   D   P  + 
Sbjct: 255 VLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVE 314

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AV+ +G ++++G G++    LGHG +     P+ + +   +
Sbjct: 315 FL-AVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRV-SGPLE 372

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP-----LSSLKSHL 376
           G+ V+ V+ G  H     S+G ++T+G G  G LGHGD   +++P P     LS LK+  
Sbjct: 373 GLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIK 430

Query: 377 AVQGLSVLAEVCPTIVQEDT 396
              G+   A +   + Q  T
Sbjct: 431 VACGVWHTAAIIEVMSQSGT 450



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETT----QCVS-FTRINFPSAAHVVQVSASENHAAFVLQ 180
           IS+  +F+ G      LGHG + T     CVS     NF    H  Q++        +  
Sbjct: 452 ISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNF----H--QLACGHTMTVALTT 505

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGH 236
           SG VFT G  +    G+     P+   RL     + L G   ++++ G      LT R  
Sbjct: 506 SGHVFTMGGTAYGQLGN-----PLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSE 560

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           V T G   +G+LGHGDT DR +P  +  L++  +V  I+ G ++  ++
Sbjct: 561 VFTWGRGANGRLGHGDTEDRRSPTFVEALKDR-NVKSISCGSNFTASI 607


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+    +K  P+
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQ 280



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 6/196 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGALG 356
            G  + WG    G L 
Sbjct: 199 CGTSFGWGSNSAGQLA 214



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLK 373
           SL+
Sbjct: 177 SLE 179


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+    +K  P+
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQ 280



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 6/196 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGALG 356
            G  + WG    G L 
Sbjct: 199 CGTSFGWGSNSAGQLA 214



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLK 373
           SL+
Sbjct: 177 SLE 179


>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
 gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
          Length = 408

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 130/295 (44%), Gaps = 27/295 (9%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+ + SAG    ++     L  ++ +V S G +  G LG+G  T Q V  T    P    
Sbjct: 79  DVDQMSAGG--TSSADSFALARTDKTVKSWGHNSSGQLGNGGNTNQTVPTT---VPRLTD 133

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V+A   HA  +  SGQV++ GDNS    G+  T      P  V+ +  V  KQ++AG
Sbjct: 134 IKDVAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPKV--KQISAG 191

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            +F+  L   G V+  G   HGQLG G+      P+ +  LE   ++V+I AG  + LA+
Sbjct: 192 CDFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVQGLE---NIVEIDAGCYHALAL 248

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +  V S+G      LG+        P  +         V  + AG  H     S  +V
Sbjct: 249 TADDTVKSWGYNLYGQLGNSSTKSSTLPVDVDWIE----GVSDIEAGAFHNYVKTSDSHV 304

Query: 345 YTWGKGYCGALGHGDE--------IDKTLPEPLSSLK--SHLAV---QGLSVLAE 386
           + WG    G L   DE         ++T P  +  L+   HLA     G++V A+
Sbjct: 305 WGWGNNQYGQLLESDEAFDANVSRTNRTAPVEIPRLEGVQHLAAGARHGVAVTAD 359



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 12/142 (8%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG-----PSYMLAVTGNGVVY 291
           V + G+   GQLG+G   D  +P S+  L   G V Q++AG      S+ LA T +  V 
Sbjct: 47  VLSWGAGRTGQLGNGTLSDSLSPSSVTSLFR-GDVDQMSAGGTSSADSFALART-DKTVK 104

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G  S+  LG+G   ++  P  +         +  V+AG +H +ALD+SG VY+WG   
Sbjct: 105 SWGHNSSGQLGNGGNTNQTVPTTVPRL----TDIKDVAAGGKHALALDTSGQVYSWGDNS 160

Query: 352 CGALGHGDEID-KTLPEPLSSL 372
            G LG+    D +T+P+ +  +
Sbjct: 161 YGQLGNNRTGDSRTVPDRVQGM 182



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSG 342
           GN  V S+G+G    LG+G   D L P ++ +  R  +  +     S+ D   +A  +  
Sbjct: 43  GNPTVLSWGAGRTGQLGNGTLSDSLSPSSVTSLFRGDVDQMSAGGTSSADSFALAR-TDK 101

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            V +WG    G LG+G   ++T+P  +  L
Sbjct: 102 TVKSWGHNSSGQLGNGGNTNQTVPTTVPRL 131


>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
 gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
          Length = 837

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 113/264 (42%), Gaps = 14/264 (5%)

Query: 116 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  + ++    C G +  G LG G  T +    T +     +    ++A  +H
Sbjct: 531 LAAGDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDR---VTPVAVSGLSGATALAAGNSH 587

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +L +G V   G NSS   G   T      P  V  L GV    + AG N T  L   
Sbjct: 588 TCTLLDTGTVQCWGWNSSGQLGD-GTRTDRVTPAAVSGLSGV--TALAAGANHTCALMDS 644

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N+ GQLG G   DR TP +++ L     V  +AAG ++  A+  +G V  +G
Sbjct: 645 GTVQCWGRNSSGQLGDGTRTDRVTPAAVSGLS---GVTALAAGANHTCALMDSGTVQCWG 701

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             S+  LG G   D + P A+         V  + AG  H  AL  +G V  WGK   G 
Sbjct: 702 RNSSGQLGDGTTTDRVTPAAVSGLS----GVTALVAGANHTCALMPTGTVQCWGKNEFGQ 757

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAV 378
           LG G   D+  P  +S L    A+
Sbjct: 758 LGDGTTTDRLTPVAVSGLSGITAL 781



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 115/269 (42%), Gaps = 14/269 (5%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  G  HT  + N     C G +  G LG G    +    T +     +    ++
Sbjct: 476 SGATSLAAGDGHTCALMNVRTAQCWGRNSSGQLGDGTTERR---LTPVTVSGLSAATALA 532

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A ++H   +L + +V   G NSS   G   T      P  V  L G     + AG + T 
Sbjct: 533 AGDSHTCALLDTRRVRCWGRNSSGQLGD-GTRTDRVTPVAVSGLSGA--TALAAGNSHTC 589

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N+ GQLG G   DR TP +++ L     V  +AAG ++  A+  +G 
Sbjct: 590 TLLDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSGLS---GVTALAAGANHTCALMDSGT 646

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V  +G  S+  LG G + D + P A+         V  ++AG  H  AL  SG V  WG+
Sbjct: 647 VQCWGRNSSGQLGDGTRTDRVTPAAVSGLS----GVTALAAGANHTCALMDSGTVQCWGR 702

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G LG G   D+  P  +S L    A+
Sbjct: 703 NSSGQLGDGTTTDRVTPAAVSGLSGVTAL 731



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 107/247 (43%), Gaps = 14/247 (5%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  G  HT  + ++    C G +  G LG G  T +    T       + V  ++
Sbjct: 576 SGATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDR---VTPAAVSGLSGVTALA 632

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  NH   ++ SG V   G NSS   G   T      P  V  L GV    + AG N T 
Sbjct: 633 AGANHTCALMDSGTVQCWGRNSSGQLGD-GTRTDRVTPAAVSGLSGV--TALAAGANHTC 689

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N+ GQLG G T DR TP +++ L  V ++V   AG ++  A+   G 
Sbjct: 690 ALMDSGTVQCWGRNSSGQLGDGTTTDRVTPAAVSGLSGVTALV---AGANHTCALMPTGT 746

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V  +G      LG G   D L P A+         +  ++AG EH  A+ ++G    WG+
Sbjct: 747 VQCWGKNEFGQLGDGTTTDRLTPVAVSGLS----GITALAAGSEHTCAVLNTGAARCWGR 802

Query: 350 GYCGALG 356
              G LG
Sbjct: 803 NLFGRLG 809



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 113/267 (42%), Gaps = 16/267 (5%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYHT  L++  +V+  G +  G LG G  T + +    +     + V  ++A  
Sbjct: 79  IALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMP---VAVSGLSGVTALAAGR 135

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   +L +G V   G NSS   G    TNR    P  V  L GV    + AG   T  L
Sbjct: 136 YHTCALLNTGTVQCWGLNSSGQLGDWTITNR--VTPVAVSGLSGV--IALAAGDRHTCAL 191

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
                V   G N HGQLG G T DR TP +++ L     V  +AAG  +  A    G V 
Sbjct: 192 LDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS---GVTALAAGGRHTCAALNTGTVQ 248

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      LG G +   L P A+            ++AG EH  AL  +G V  WG   
Sbjct: 249 CWGGNGAGQLGDGTRTSRLTPMAVSGLS----GATALAAGFEHTCALLDTGTVRCWGLNS 304

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAV 378
            G LG G    +  P  +S L    A+
Sbjct: 305 SGQLGDGTTERRLTPVAVSGLSGVTAL 331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 111/274 (40%), Gaps = 14/274 (5%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V   +G   +T G  HT  +  +    C G +  G LG G    +    T +     + 
Sbjct: 421 VVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTTERR---LTPVTVSGLSG 477

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
              ++A + H   ++        G NSS   G   T R +  P  V  L       + AG
Sbjct: 478 ATSLAAGDGHTCALMNVRTAQCWGRNSSGQLGDGTTERRLT-PVTVSGLSAA--TALAAG 534

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  L     V   G N+ GQLG G   DR TP +++ L        +AAG S+   +
Sbjct: 535 DSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLS---GATALAAGNSHTCTL 591

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              G V  +G  S+  LG G + D + P A+         V  ++AG  H  AL  SG V
Sbjct: 592 LDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSGLS----GVTALAAGANHTCALMDSGTV 647

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             WG+   G LG G   D+  P  +S L    A+
Sbjct: 648 QCWGRNSSGQLGDGTRTDRVTPAAVSGLSGVTAL 681



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 109/269 (40%), Gaps = 14/269 (5%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  GRYHT  + N+    C G +  G LG    T +    T +     + V+ ++
Sbjct: 126 SGVTALAAGRYHTCALLNTGTVQCWGLNSSGQLGDWTITNR---VTPVAVSGLSGVIALA 182

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A + H   +L +  V   G+N     G   TN   + P  V  L GV    + AG   T 
Sbjct: 183 AGDRHTCALLDTRTVRCWGENEHGQLGDGTTNDR-WTPVAVSGLSGV--TALAAGGRHTC 239

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G V   G N  GQLG G    R TP +++ L        +AAG  +  A+   G 
Sbjct: 240 AALNTGTVQCWGGNGAGQLGDGTRTSRLTPMAVSGLS---GATALAAGFEHTCALLDTGT 296

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V  +G  S+  LG G     L P A+         V  ++AGD H  A+  +  V  WG 
Sbjct: 297 VRCWGLNSSGQLGDGTTERRLTPVAVSGLS----GVTALAAGDFHTCAVLQTETVQCWGL 352

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G LG G    +  P  +S L    A+
Sbjct: 353 NSSGQLGDGTTERRLTPVSVSGLSGSTAL 381



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 10/216 (4%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V+ ++A   H   +L +G V+  G N S   G   T      P  V  L GV    + 
Sbjct: 76  SRVIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAM-PVAVSGLSGV--TALA 132

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T  L   G V   G N+ GQLG     +R TP +++ L     V+ +AAG  +  
Sbjct: 133 AGRYHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPVAVSGLS---GVIALAAGDRHTC 189

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+     V  +G   +  LG G  +D   P A+         V  ++AG  H  A  ++G
Sbjct: 190 ALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS----GVTALAAGGRHTCAALNTG 245

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            V  WG    G LG G    +  P  +S L    A+
Sbjct: 246 TVQCWGGNGAGQLGDGTRTSRLTPMAVSGLSGATAL 281



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 115/292 (39%), Gaps = 20/292 (6%)

Query: 88  GNWKRVLRFLQ-SVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           G+W    R    +V   S ++  +AG+      R+   L+   +V   G +  G LG G 
Sbjct: 159 GDWTITNRVTPVAVSGLSGVIALAAGD------RHTCALLDTRTVRCWGENEHGQLGDGT 212

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
              +   +T +     + V  ++A   H    L +G V   G N +   G   T      
Sbjct: 213 TNDR---WTPVAVSGLSGVTALAAGGRHTCAALNTGTVQCWGGNGAGQLGD-GTRTSRLT 268

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P  V  L G     + AG   T  L   G V   G N+ GQLG G T  R TP +++ L 
Sbjct: 269 PMAVSGLSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRLTPVAVSGLS 326

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
               V  +AAG  +  AV     V  +G  S+  LG G     L P ++           
Sbjct: 327 ---GVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGS----T 379

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            ++AG  H  AL  +G V  WG+   G LG G    +  P  +S L    A+
Sbjct: 380 ALAAGGVHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLSGATAL 431


>gi|212218636|ref|YP_002305423.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
 gi|212012898|gb|ACJ20278.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
          Length = 479

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 118/271 (43%), Gaps = 32/271 (11%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFP----SAAHVVQVS 169
           ++  R+  +L     ++  G ++ G LG G   E +Q     +  FP        +VQ++
Sbjct: 166 LSDYRHAFILTEEGGIYGWGFNISGELGLGYRFERSQPTELPQNFFPYLLERGDRIVQLN 225

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPI-----FRPRLVEALKGVPCKQV 221
            ++ +       G V+  G N     G    +D   P+     F P   E        QV
Sbjct: 226 FADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP---EWHPDDYIIQV 282

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP-------LEEVGSVVQI 274
             G   T  LT  G+++  G N++GQLG  D  DR  P ++ P       LE    ++++
Sbjct: 283 VVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRP-ALLPWNRFPGLLERNDRIIEL 341

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-----FRRKGIHVVRVS 329
            AG +  LA T  G +Y +G+   + L  G+      P  +        RR+G H+V + 
Sbjct: 342 IAGGARSLARTEQGFIYIWGA--RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELI 399

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           AG +H +A    GY+Y WG+ Y G LG GD 
Sbjct: 400 AGPDHTLARTEQGYIYAWGRNYYGQLGLGDR 430



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 10/146 (6%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDR--PT--PKSIAP--LEEVGSVVQIAAGPSYMLAV 284
           LT  G ++  G N  G+LG G   +R  PT  P++  P  LE    +VQ+     Y++A 
Sbjct: 175 LTEEGGIYGWGFNISGELGLGYRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVAR 234

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH----VVRVSAGDEHVVALDS 340
           T  G VY +G      LG  ++ D L P  +        H    +++V  GD H +AL  
Sbjct: 235 TAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQ 294

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLP 366
            GY+Y WGK   G LG  D+ D+  P
Sbjct: 295 LGYIYAWGKNSYGQLGFRDQQDRNRP 320



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI-QTF----RRKGIH 324
           ++VQ+ +   +   +T  G +Y +G   +  LG G + +  QP  + Q F      +G  
Sbjct: 161 TIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGYRFERSQPTELPQNFFPYLLERGDR 220

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +V+++  D ++VA  + G+VY WG  Y G LG  DE D+  P  LS
Sbjct: 221 IVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELS 266



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 23/212 (10%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQC--VSFTRINFPSA---AHVVQVSASENH 174
           RY     +   V+  G +  G LG   E  +   V  +   FP      +++QV   + H
Sbjct: 229 RYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRH 288

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPR-----LVEALKGVPCKQVTAGLN 226
              + Q G ++  G NS    G RD    NRP   P      L+E  +     ++ AG  
Sbjct: 289 TLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLE--RNDRIIELIAGGA 346

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP-----LEEVGS-VVQIAAGPSY 280
            +   T +G ++  G+     L  GD   R  P  +       L   G  +V++ AGP +
Sbjct: 347 RSLARTEQGFIYIWGARW--LLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDH 404

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            LA T  G +Y++G      LG G++  + QP
Sbjct: 405 TLARTEQGYIYAWGRNYYGQLGLGDRRIQRQP 436


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 34/281 (12%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  ++L I ++  +F+ G +  G LGH PET    S   ++  +   +VQ +    H
Sbjct: 49  VVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWH 108

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRP-----RLVEALKGVPCKQVTAG 224
              V   G+ +  G N    CG       D  R + R      R    LK    +QV AG
Sbjct: 109 CLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLK---VRQVAAG 165

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  LT  GHV T G         GD     TP  +  LE   +V  IA G  + LA+
Sbjct: 166 GTHSVVLTQDGHVWTWGQ----PWPPGDIKQISTPVRVQGLE---NVKVIAVGAFHNLAL 218

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G+++++G+     LG G+     QP  ++      + +V ++AG  H  AL   G V
Sbjct: 219 TEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSD--LSLVDIAAGGWHSTALTKEGEV 276

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLA 385
           Y WG+G  G LG GD  DK+         SH+  Q + +LA
Sbjct: 277 YAWGRGEHGRLGFGD--DKS---------SHMVPQKVELLA 306



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 2/137 (1%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +H L ++   + ++ G++  G LG G +T       R+   S   +V ++A   H
Sbjct: 208 IAVGAFHNLALTEDGILWAWGNNEYGQLGTG-DTQPRSQPIRVEGLSDLSLVDIAAGGWH 266

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G+V+  G       G  D       P+ VE L G    QV+ G   +  LT  
Sbjct: 267 STALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRD 326

Query: 235 GHVHTCGSNTHGQLGHG 251
           G + + G   HG+LG+G
Sbjct: 327 GRMFSYGRGDHGRLGYG 343



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A  P++ L       V ++GSG +  LG G   +E   R +       + V  V AG  
Sbjct: 1   MAPPPAFSLPT----AVLAWGSGEDGQLGMGGYEEEDWARGVAAL--DALAVSAVVAGSR 54

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQ 379
           + +A+ + G ++TWG    G LGH  E   ++ P P+ +L     VQ
Sbjct: 55  NSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQ 101


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
           CCMP526]
          Length = 1021

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 26/249 (10%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHV-----------------V 166
           ++ ++ VF+ G    G LGH P     ++   +   P    +                 V
Sbjct: 631 IVPSTRVFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFV 690

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            ++A  N++A V + G+++T GD S+   GH D+ +P++RPR VEAL+ V   +V  G  
Sbjct: 691 DLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS-KPVYRPRQVEALQDVKIVKVACGDF 749

Query: 227 FTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSY 280
            T  +   G + T G         G LGHGD  ++P PK +  L + G  V  +A G  +
Sbjct: 750 HTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKH 809

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            L +T +G V + G+G    LG+G   D   P  ++ F  K  ++V V+AG    + L  
Sbjct: 810 TLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEK-TNIVEVAAGHAFNLVLTQ 868

Query: 341 SGYVYTWGK 349
            G ++TWG+
Sbjct: 869 DGKIFTWGR 877



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 6/155 (3%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AGLN++  +T  G ++T G  ++ +LGHGD+     P+ +  L++V  +V++A G  +
Sbjct: 692 LAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDV-KIVKVACGDFH 750

Query: 281 MLAVTGNGVVYSFG-----SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             A+  +G ++++G      G    LGHG++ ++ +P+ +++    G  V  V+ G++H 
Sbjct: 751 TAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHT 810

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           + L   G V T G G  G LG+G   D  +PEP+ 
Sbjct: 811 LILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVE 845



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 19/242 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   +  +  +++ G      LGHG ++       ++       +V+V+  + H A + +
Sbjct: 698 YSAGVTEDGKLYTWGDGSNHKLGHG-DSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDE 756

Query: 181 SGQVFTCG------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLT 232
            G+++T G                +  +P  RP++V +L    C+   V  G   T  LT
Sbjct: 757 DGRLWTWGWGGSLFGGIGGLGHGDEAEQP--RPKVVRSLVDYGCRVGSVACGEKHTLILT 814

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G+  +G+LG+G + D   P+ +   +E  ++V++AAG ++ L +T +G +++
Sbjct: 815 DDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFT 874

Query: 293 FGSGS------NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G            +       E  P  ++    K   VV V+AG  H  A+   G +Y 
Sbjct: 875 WGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESK--KVVHVAAGHSHSAAVTEEGELYM 932

Query: 347 WG 348
           WG
Sbjct: 933 WG 934



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 28/162 (17%)

Query: 213 LKGVPC-KQVTAGLNFTGFLTIRGH-------VHTCGSNTHGQLGHGDT----------- 253
           L+GVP   +V     F+       H       V   G  T GQLGH              
Sbjct: 605 LRGVPAVARVRQSTTFSTLSATSSHTIVPSTRVFAWGQGTEGQLGHSPIQKSALTGAYVE 664

Query: 254 -------LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
                  LD    +           V +AAG +Y   VT +G +Y++G GSN  LGHG+ 
Sbjct: 665 LSPRELRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS 724

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
               +PR ++    + + +V+V+ GD H  A+D  G ++TWG
Sbjct: 725 KPVYRPRQVEAL--QDVKIVKVACGDFHTAAIDEDGRLWTWG 764



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 30/235 (12%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  HTL++++   V + G+   G LG+G  +   V      F    ++V+V+A    
Sbjct: 803  VACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAF 862

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               + Q G++FT G N     G       D       P LVEAL+      V AG + + 
Sbjct: 863  NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSA 922

Query: 230  FLTIRGHVHTCGSNTHGQ-----LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +T  G ++  G   H +     +G GD                  V Q+  G S+   V
Sbjct: 923  AVTEEGELYMWGMKIHLEPQVFRVGEGD-----------------KVWQVGCGGSHTAVV 965

Query: 285  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            T +   +++FG GS+ CLGHG +     P+ +      G  VV+V+ G  H+  +
Sbjct: 966  TEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVAD-GLAGRGVVKVACGHRHMAVI 1019


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 128/269 (47%), Gaps = 19/269 (7%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H L L ++  V S G++  G LG G  TT       +  P A  V+ ++    H
Sbjct: 803  IAGGATHGLALKTDGRVLSWGANAEGELGDG--TTVARRAPAVVGPLAG-VLSIAVGARH 859

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +  +L  G V   G N     G   T   +  P  V+ L GV    + AG  F+  L   
Sbjct: 860  SLALLGDGSVQAWGSNIQGQLGDGTTVSRVL-PVRVQGLTGVAA--IAAGDGFSLALKHD 916

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V   G NT GQLG     D  T +S+ P+  + +  V  +AAG ++ LA+ G+G +++
Sbjct: 917  GTVWAWGGNTLGQLG-----DNTTLRSLVPVRTQALTGVTAVAAGRNHSLALKGDGTLWA 971

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +GS +   LG G Q  +L P  +Q     G+  +   AGD H +A+ S G V+ WG+   
Sbjct: 972  WGSNTYGELGDGTQARKLAP--VQVTSLTGVSAL--DAGDHHSLAVTSGGKVWGWGRNQF 1027

Query: 353  GALGHGDEID-KTLPEPLSSLKSHLAVQG 380
            G +G G + + + LP  +  L S +AV G
Sbjct: 1028 GQVGKGVKSNWQLLPAQVPGLTSAVAVAG 1056



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 114/252 (45%), Gaps = 14/252 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+L L S+ +V+S G++  G LG G   ++ V       P   +VV ++A  +H
Sbjct: 102 IGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAP---VPGLTNVVAIAAGFSH 158

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+  G N++   G     R +  P  V  L GV  K + AG   +  LT  
Sbjct: 159 SMVLKADGTVWAWGLNAAGQLGDGTPTRRL-TPVQVLGLTGV--KDIAAGNVHSLALTAD 215

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G + T G N  GQLG GD + R T    A L  +  VV ++ G S+ L +  +G V+S+G
Sbjct: 216 GRLWTWGGNVDGQLGTGDLVGRST---AAALPGMTGVVALSGGGSHSLILKMDGSVWSWG 272

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG G       P  +         +V V+ G +H VAL   G V+ WG      
Sbjct: 273 KNDAGQLGLGSVVSTPTPTQVPGL----TEMVAVTGGGQHSVALRVDGTVWAWGSNARAQ 328

Query: 355 LGHGDEIDKTLP 366
           LG G +  +  P
Sbjct: 329 LGDGTQTQRLSP 340



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 115/271 (42%), Gaps = 19/271 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  G  H+L L ++  +++ G ++ G LG G    +    T    P    VV +S 
Sbjct: 198 GVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGDLVGRS---TAAALPGMTGVVALSG 254

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD---TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             +H+  +   G V++ G N +   G      T  P   P L E +       VT G   
Sbjct: 255 GGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPTQVPGLTEMVA------VTGGGQH 308

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L + G V   GSN   QLG G    R +P  +  L +V  V   A G  + +AV GN
Sbjct: 309 SVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKGVA--AGGGLHSVAVKGN 366

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++GS S   +G G    +L P    T  R  +    VSAG  H +AL   G  + W
Sbjct: 367 GEVWAWGSNSEGQVGDGTYLMKLVP----TTARVLVERADVSAGGGHTLALKPDGTAWGW 422

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           G      LG G    + LP  + +L    AV
Sbjct: 423 GLNAQSQLGDGTTTARPLPVQVLNLTRVAAV 453



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 15/255 (5%)

Query: 106  IVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
            +V   AG + I  G  H+L L+ + SV + GS++ G LG G   ++ +    +       
Sbjct: 843  VVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLP---VRVQGLTG 899

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V  ++A +  +  +   G V+  G N+    G   T R +  P   +AL GV    V AG
Sbjct: 900  VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLV-PVRTQALTGVTA--VAAG 956

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             N +  L   G +   GSNT+G+LG G    +  P  +  L  V +   + AG  + LAV
Sbjct: 957  RNHSLALKGDGTLWAWGSNTYGELGDGTQARKLAPVQVTSLTGVSA---LDAGDHHSLAV 1013

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            T  G V+ +G      +G G + + +L P  +          V V+ G EH +AL S   
Sbjct: 1014 TSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQVPGL----TSAVAVAGGGEHSLALLSDRS 1069

Query: 344  VYTWGKGYCGALGHG 358
            V+ WG G  G LG G
Sbjct: 1070 VWAWGHGDMGQLGTG 1084



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + ++ G  H+L++  + SV+S G +  G LG G   +   + T    P    +V V+ 
Sbjct: 248 GVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVS---TPTPTQVPGLTEMVAVTG 304

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+  +   G V+  G N+    G   T      P  V  L  V       GL+    
Sbjct: 305 GGQHSVALRVDGTVWAWGSNARAQLGD-GTQTQRLSPCQVTGLTQVKGVAAGGGLHSV-A 362

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G V   GSN+ GQ+G G  L +  P +   L E      ++AG  + LA+  +G  
Sbjct: 363 VKGNGEVWAWGSNSEGQVGDGTYLMKLVPTTARVLVER---ADVSAGGGHTLALKPDGTA 419

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           + +G  +   LG G       P  +    R    V  VSAG  H +AL   G V+ WG  
Sbjct: 420 WGWGLNAQSQLGDGTTTARPLPVQVLNLTR----VAAVSAGTYHSLALKEDGTVWGWGAN 475

Query: 351 YCGALGHGDEIDKTLPEPLS 370
           Y GA+G G  ++++ P  +S
Sbjct: 476 YWGAIGDGTALNRSQPVKVS 495



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 36/290 (12%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           S+   E ++    +  GR+H+L++ ++ +V+S G +  G LG G         TR N P 
Sbjct: 39  SARAAEGTSRQGSVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGS--------TRQN-PM 89

Query: 162 AAHVVQ------VSASENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLV 210
            A V +      + A E H+  +   G V++ G N++   G      R    P+  P L 
Sbjct: 90  PARVWRLFSITAIGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPV--PGLT 147

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             +       + AG + +  L   G V   G N  GQLG G    R TP  +  L     
Sbjct: 148 NVVA------IAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGLT---G 198

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IAAG  + LA+T +G ++++G   +  LG G+    L  R+          VV +S 
Sbjct: 199 VKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGD----LVGRSTAAALPGMTGVVALSG 254

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQG 380
           G  H + L   G V++WGK   G LG G  +    P  +  L   +AV G
Sbjct: 255 GGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPTQVPGLTEMVAVTG 304



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 107/263 (40%), Gaps = 33/263 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE------- 172
           +Y   +  + SV S G++  G LG G             FP A  V  +  SE       
Sbjct: 758 QYSLGIALDGSVQSTGANASGQLGDG-----------TLFPRAEPVPVIGLSECRAIAGG 806

Query: 173 -NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTG 229
             H   +   G+V + G N+    G   T   + R  P +V  L GV    +  G   + 
Sbjct: 807 ATHGLALKTDGRVLSWGANAEGELGDGTT---VARRAPAVVGPLAGV--LSIAVGARHSL 861

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   GSN  GQLG G T+ R  P  +  L     V  IAAG  + LA+  +G 
Sbjct: 862 ALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGLT---GVAAIAAGDGFSLALKHDGT 918

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  +   LG       L P   Q        V  V+AG  H +AL   G ++ WG 
Sbjct: 919 VWAWGGNTLGQLGDNTTLRSLVPVRTQAL----TGVTAVAAGRNHSLALKGDGTLWAWGS 974

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
              G LG G +  K  P  ++SL
Sbjct: 975 NTYGELGDGTQARKLAPVQVTSL 997



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 15/247 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSAS 171
           M + +G +H+L +S + SV++ G +  G LG G  T T+   F     P+   VV ++A 
Sbjct: 501 MTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRNAPF---RVPNLEGVVSLAAG 557

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   G V+  G   + C    +  R +  P  V+ L       V AG   +  L
Sbjct: 558 GEHSLALKADGTVWVWGRQDT-CADPENVGRVLRVPEQVQGL--TDAVAVRAGRCHSVVL 614

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G +   G N  GQL  G   DR TP  +  L     V+  + G    LA+  +G  +
Sbjct: 615 RADGTLWAWGRNAEGQLADGTFTDRMTPARVDGLT---GVISFSVGSEQTLALKADGTAW 671

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  +   LG G      +P  + T       V  V+ G  H + L     ++ WG   
Sbjct: 672 AWGPNAQGQLGGGLSVPRTRPTQVPTL----TDVRTVAMGAVHALVLKDDLTLWAWGSNA 727

Query: 352 CGALGHG 358
            G +G G
Sbjct: 728 EGQVGDG 734



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 107/251 (42%), Gaps = 23/251 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAAHVVQ 167
           + +T G  H++ +  + +V++ GS+    LG G +T      Q    T++   +A   + 
Sbjct: 300 VAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGL- 358

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
                 H+  V  +G+V+  G NS    G   T      P     L  V    V+AG   
Sbjct: 359 ------HSVAVKGNGEVWAWGSNSEGQVGD-GTYLMKLVPTTARVL--VERADVSAGGGH 409

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G     G N   QLG G T  RP P  +  L  V +V   +AG  + LA+  +
Sbjct: 410 TLALKPDGTAWGWGLNAQSQLGDGTTTARPLPVQVLNLTRVAAV---SAGTYHSLALKED 466

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G+     +G G   +  QP  +       +  + V++G+ H +AL   G V+ W
Sbjct: 467 GTVWGWGANYWGAIGDGTALNRSQPVKVSGT----LVAMTVASGNFHSLALSVDGSVWAW 522

Query: 348 GKGYCGALGHG 358
           G    G LG G
Sbjct: 523 GDNSLGQLGDG 533



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV----QVSASEN 173
           G  H++ +  N  V++ GS+  G +G G    + V       P+ A V+     VSA   
Sbjct: 356 GGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLMKLV-------PTTARVLVERADVSAGGG 408

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G  +  G N+    G   T     RP  V+ L       V+AG   +  L  
Sbjct: 409 HTLALKPDGTAWGWGLNAQSQLGDGTTT---ARPLPVQVLNLTRVAAVSAGTYHSLALKE 465

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ--IAAGPSYMLAVTGNGVVY 291
            G V   G+N  G +G G  L+R  P  ++     G++V   +A+G  + LA++ +G V+
Sbjct: 466 DGTVWGWGANYWGAIGDGTALNRSQPVKVS-----GTLVAMTVASGNFHSLALSVDGSVW 520

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGK 349
           ++G  S   LG G     + P     FR   +  VV ++AG EH +AL + G V+ WG+
Sbjct: 521 AWGDNSLGQLGDGT----VTPTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGR 575



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 30/286 (10%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAH 164
           V+   G +  + G   TL L ++ + ++ G +  G LG G      V  TR    P+   
Sbjct: 645 VDGLTGVISFSVGSEQTLALKADGTAWAWGPNAQGQLGGG----LSVPRTRPTQVPTLTD 700

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPIFRPRLVEALKGVPCKQVT 222
           V  V+    HA  +     ++  G N+    G    D      R  L  +      + + 
Sbjct: 701 VRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDWQAAPVRSGLAAS------RGLA 754

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           A   ++  + + G V + G+N  GQLG G    R  P  +  L E  +   IA G ++ L
Sbjct: 755 AATQYSLGIALDGSVQSTGANASGQLGDGTLFPRAEPVPVIGLSECRA---IAGGATHGL 811

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+  +G V S+G+ +   LG G       P  +         V+ ++ G  H +AL   G
Sbjct: 812 ALKTDGRVLSWGANAEGELGDGTTVARRAPAVVGPL----AGVLSIAVGARHSLALLGDG 867

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVC 388
            V  WG    G LG G  + + LP         + VQGL+ +A + 
Sbjct: 868 SVQAWGSNIQGQLGDGTTVSRVLP---------VRVQGLTGVAAIA 904


>gi|428166718|gb|EKX35689.1| hypothetical protein GUITHDRAFT_57398, partial [Guillardia theta
           CCMP2712]
          Length = 257

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 100/208 (48%), Gaps = 4/208 (1%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V+    H+A + + G++ T G++    CGH DT R    PRL+ +L+     QV  G + 
Sbjct: 1   VACGGQHSALITKDGELVTWGNSDRGQCGH-DTFRSSQVPRLIRSLREHYVMQVACGESH 59

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT    V +CG   +G LGHGD  D  TP+ I  L  +  VVQIAAG ++  AV   
Sbjct: 60  TLILTSTSQVLSCGLAAYGALGHGDGEDCCTPRVIGALWSL-PVVQIAAGENHSAAVVST 118

Query: 288 GVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           G  + +G   +  LG   +    E+    I       ++V  V+ G  H V L S   VY
Sbjct: 119 GEAHMWGLNKHGQLGLRAEGGRGEISMAEINQAMLSTLNVKLVACGGNHSVFLCSDLKVY 178

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           + G G  G LGHG   D+  P  +  L+
Sbjct: 179 SCGMGSKGQLGHGSRRDEHRPRRVERLE 206



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASENHAAF 177
           G++  L+  +  + + G+S  G  GH  +T +     R+      H V+QV+  E+H   
Sbjct: 5   GQHSALITKDGELVTWGNSDRGQCGH--DTFRSSQVPRLIRSLREHYVMQVACGESHTLI 62

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  + QV +CG  +    GH D       PR++ AL  +P  Q+ AG N +  +   G  
Sbjct: 63  LTSTSQVLSCGLAAYGALGHGD-GEDCCTPRVIGALWSLPVVQIAAGENHSAAVVSTGEA 121

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           H  G N HGQLG    G   +    +    +    +V  +A G ++ + +  +  VYS G
Sbjct: 122 HMWGLNKHGQLGLRAEGGRGEISMAEINQAMLSTLNVKLVACGGNHSVFLCSDLKVYSCG 181

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            GS   LGHG + DE +PR ++    +   +  VS G EH +  DSSG ++  G    G 
Sbjct: 182 MGSKGQLGHGSRRDEHRPRRVERLEEQ--EISEVSCGYEHTLFRDSSGVLFVCGSNEYGQ 239

Query: 355 LGHGDEIDKTL 365
           L  G +  + L
Sbjct: 240 LFLGSDHQEAL 250



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           MQ+  G  HTL++ S S V SCG +  G LGHG +   C +   I    +  VVQ++A E
Sbjct: 51  MQVACGESHTLILTSTSQVLSCGLAAYGALGHG-DGEDCCTPRVIGALWSLPVVQIAAGE 109

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
           NH+A V+ +G+    G N     G R       I    + +A L  +  K V  G N + 
Sbjct: 110 NHSAAVVSTGEAHMWGLNKHGQLGLRAEGGRGEISMAEINQAMLSTLNVKLVACGGNHSV 169

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           FL     V++CG  + GQLGHG   D   P+ +  LEE   + +++ G  + L    +GV
Sbjct: 170 FLCSDLKVYSCGMGSKGQLGHGSRRDEHRPRRVERLEEQ-EISEVSCGYEHTLFRDSSGV 228

Query: 290 VYSFGSGSNFCLGHGEQHDE-LQPRAI 315
           ++  GS     L  G  H E L P  I
Sbjct: 229 LFVCGSNEYGQLFLGSDHQEALTPVEI 255



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A G  +   +T +G + ++G+      GH        PR I++ R    +V++V+ G+ 
Sbjct: 1   VACGGQHSALITKDGELVTWGNSDRGQCGHDTFRSSQVPRLIRSLREH--YVMQVACGES 58

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           H + L S+  V + G    GALGHGD  D   P  + +L S   VQ
Sbjct: 59  HTLILTSTSQVLSCGLAAYGALGHGDGEDCCTPRVIGALWSLPVVQ 104


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 16/279 (5%)

Query: 85  RCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI--SNSSVFSCGSSLCGVL 142
           +C  N + +++    VE    ++      + + +G  H L I    + V++ G +  G L
Sbjct: 108 QCASNSQSIIQLPTRVEQ---LINMQLRVLAMASGDSHVLAIVHPGNQVYAWGCNRWGQL 164

Query: 143 GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
           G G +T +    T I   +      VS    H+  +   G++++ G  +    GH  +  
Sbjct: 165 GTGDQTNRATP-TPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGH-GSEA 222

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   P++V AL G     +  G+  +    +RG V+T G N +GQLG+       +P  +
Sbjct: 223 PSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKL 282

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRR 320
             +E+   VV++  G ++   +T  G +YSFG   N C  LG G   D  QP+ +     
Sbjct: 283 RDMEK-HHVVKVTCGKNHTHLLTAEGHIYSFGF--NVCGQLGVGGYADSQQPKKVDLPE- 338

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
              H V + +G  H + L + G VY+WG    GALG GD
Sbjct: 339 ---HAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGD 374



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 7/200 (3%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI---RGHVHT 239
           Q+++ G N    C   ++   I  P  VE L  +  + +      +  L I      V+ 
Sbjct: 97  QIYSWGYNYFGQCA-SNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYA 155

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N  GQLG GD  +R TP  IA +        ++ G  + +A++  G +YS+G G+  
Sbjct: 156 WGCNRWGQLGTGDQTNRATPTPIA-IATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGG 214

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             GHG +   L P+ +      G  +  ++ G  H  A D  G VYTWG    G LG+  
Sbjct: 215 RTGHGSEAPSLSPQVVSALV--GKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNT 272

Query: 360 EIDKTLPEPLSSLKSHLAVQ 379
                 P  L  ++ H  V+
Sbjct: 273 AKKHLSPNKLRDMEKHHVVK 292



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 9/208 (4%)

Query: 165 VVQVSASENHAAFVLQSG-QVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVT 222
           V+ +++ ++H   ++  G QV+  G N     G  D TNR    P  +          V+
Sbjct: 133 VLAMASGDSHVLAIVHPGNQVYAWGCNRWGQLGTGDQTNRAT--PTPIAIATPTVFTSVS 190

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYM 281
            G   +  L+  G +++ G  T G+ GHG      +P+ ++ L  VG  +  +A G  + 
Sbjct: 191 CGAQHSMALSNYGELYSWGCGTGGRTGHGSEAPSLSPQVVSAL--VGKQITSMAGGMLHS 248

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A    G VY++G      LG+      L P  ++   +   HVV+V+ G  H   L + 
Sbjct: 249 AATDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKLRDMEKH--HVVKVTCGKNHTHLLTAE 306

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           G++Y++G   CG LG G   D   P+ +
Sbjct: 307 GHIYSFGFNVCGQLGVGGYADSQQPKKV 334



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 45/215 (20%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           SV++ G +  G LG+       +S  ++      HVV+V+  +NH   +   G +++ G 
Sbjct: 256 SVYTWGWNKYGQLGNNTAKKH-LSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGF 314

Query: 190 NSSFCCG------HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           N    CG      + D+ +P        A+       + +G   T  LT +G+V++ G  
Sbjct: 315 N---VCGQLGVGGYADSQQPKKVDLPEHAV------DIVSGYYHTLCLTNKGNVYSWGYM 365

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV----------------------------GSVVQ-I 274
           + G LG GD     +   + PL  +                            G V + I
Sbjct: 366 SDGALGLGDIAGHQSKPKLIPLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKI 425

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           AAG      +T +G +Y FG G ++ +G+G   ++
Sbjct: 426 AAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTED 460


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 11/213 (5%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG++F  G N     G          P++VE L GVP  Q++AG   +  L++ G++++ 
Sbjct: 89  SGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 148

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G T  +  P  I  L+    V  +A G S+   +T +G++++FG+G +  
Sbjct: 149 GKNEFGQLGLGHTESKDYPSLIEGLDN-QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGD 359
           LGH    +EL+P  +         V +++ G  H +A  S  G V+++G G  G LG+G 
Sbjct: 208 LGHNSTQNELRPCLVAELVE--YRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 265

Query: 360 EIDKTLPEPLS-------SLKSHLAVQGLSVLA 385
             D+ +P P+         L+SH + + L ++A
Sbjct: 266 TRDQLMPLPVKVSSSEELKLESHTSEKELIMIA 298



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 7/223 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +F+ G +L G LG G +     +   +   +   + Q+SA E H+  +  SG +++ G 
Sbjct: 91  ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGK 150

Query: 190 NS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           N       GH ++      P L+E L     + V  G + +  LT  G + T G+  HGQ
Sbjct: 151 NEFGQLGLGHTESKD---YPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQ 306
           LGH  T +   P  +A L E   V QIA G  + LA V+  G V+SFGSG +  LG+G  
Sbjct: 208 LGHNSTQNELRPCLVAELVEY-RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 266

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            D+L P  ++    + + +   ++  E ++    +  +  W K
Sbjct: 267 RDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIK 309



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 16/171 (9%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV- 271
           GV   Q+ AG    G  T  G +   G N HGQLG G    R  P +  P  +E +  V 
Sbjct: 72  GVQVHQLLAGSG--GARTPSGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVP 125

Query: 272 -VQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             QI+AG ++ +A++ +G +YS+G        LGH E  D   P  I+    + +    V
Sbjct: 126 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--YPSLIEGLDNQKVEF--V 181

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           + G  H   L   G ++T+G G  G LGH    ++  P  ++ L  +   Q
Sbjct: 182 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQ 232


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  +S S  +F+ G      G+LGHG + +  +   R++ P     VV V+  
Sbjct: 318 VACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIP-KRVSGPLEGLQVVAVACG 376

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG------ 224
             H+A    +G++FT GD      GH   NR  +  P+ V+ L G    +V  G      
Sbjct: 377 TWHSALATSNGKLFTFGDGRFGVLGH--GNRASVAYPKEVQLLSGYKAIKVACGVWHSAA 434

Query: 225 ----LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
               ++ +G       + T G     +LGH +      P  +A + E  +  Q+A G + 
Sbjct: 435 IIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEY-NFHQVACGYTM 493

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G V+S G  +   LG+    D   P  ++  +  G  V  +S G  HV  L S
Sbjct: 494 TVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRD-KLVGEFVEEISCGANHVAVLTS 551

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              +YTWG+G  G LGHGD  DK  P  + +LK
Sbjct: 552 RSELYTWGRGANGRLGHGDTDDKKSPTLVEALK 584



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 28/233 (12%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+    
Sbjct: 373 VACGTWHSALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACGVW 430

Query: 174 HAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H+A ++           + ++FT GD   +  GH +       P  V A+      QV  
Sbjct: 431 HSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHAN-KETYLEPTCVAAVAEYNFHQVAC 489

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAAGP 278
           G   T  LT  GHV + G  T+GQLG+      P      P+    + VG  V+ I+ G 
Sbjct: 490 GYTMTVALTASGHVFSMGGTTYGQLGN------PNSDGKVPILVRDKLVGEFVEEISCGA 543

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  +S G
Sbjct: 544 NHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDR--HVKNISCG 594



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 4/178 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G      +T +G V T G ++ G+LGHG   D   P  + 
Sbjct: 249 VLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVE 308

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  +A G  +  AV+ +G ++++G G++    LGHG       P+ + +   +
Sbjct: 309 SLA-ITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRV-SGPLE 366

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           G+ VV V+ G  H     S+G ++T+G G  G LGHG+      P+ +  L  + A++
Sbjct: 367 GLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIK 424



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  VFS G +  G LG+ P +   V     +      V ++S   N
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRDKLVGEFVEEISCGAN 544

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A +    +++T G  ++   GH DT+     P LVEALK    K ++ G  FT
Sbjct: 545 HVAVLTSRSELYTWGRGANGRLGHGDTDDKK-SPTLVEALKDRHVKNISCGSTFT 598


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 123/280 (43%), Gaps = 32/280 (11%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  ++L I  + ++F+ G +  G LGH PET      +++   +   +VQ +    H
Sbjct: 43  VVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWH 102

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFR---------PRLVEALKGVPCKQV 221
              V   G+ +  G N    CG      +  RP+ R         P+LV        +QV
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLV-------VRQV 155

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG   +  LT  GHV + G         GD      P  +  LE   +V  IA G  + 
Sbjct: 156 AAGGTHSVVLTREGHVWSWGQ----PWPPGDIKQISIPVRVQGLE---NVRLIAVGAFHN 208

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+  NG ++++G+     LG G+     QP  +Q      + +V ++AG  H  AL   
Sbjct: 209 LALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL--DSLTLVDIAAGGWHSTALTDK 266

Query: 342 GYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQ 379
           G VY WG+G  G LG G  D+  K LP+ ++ L     +Q
Sbjct: 267 GEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQ 306



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 10/173 (5%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G++     G  D    +    +VEAL+    + V +G   +  +   G + T G N 
Sbjct: 10  WGSGEDGQLGLGTNDEKEWVC---VVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66

Query: 245 HGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            G LGH  +T     P  +  L  V  +VQ A G  + LAV   G  Y++G       G 
Sbjct: 67  RGTLGHPPETKTENIPSQVKALANV-KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 304 GEQHDELQ---PRAIQTFRRKGIHVV--RVSAGDEHVVALDSSGYVYTWGKGY 351
               DE++    R I   +R    +V  +V+AG  H V L   G+V++WG+ +
Sbjct: 126 EPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQPW 178



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +H L L  N ++++ G++  G LG G +T        +    +  +V ++A   H
Sbjct: 201 IAVGAFHNLALEENGTLWAWGNNEYGQLGTG-DTQPRSQPIPVQGLDSLTLVDIAAGGWH 259

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  +   G+V+  G       G  D ++     P+ V  L G    QV+ G   +  LT 
Sbjct: 260 STALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTR 319

Query: 234 RGHVHTCGSNTHGQLGHGD--TLDRP--TPKSIAPLE 266
            G + + G   HG+LG G   T  +P   P  I P E
Sbjct: 320 DGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPE 356


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 136/321 (42%), Gaps = 26/321 (8%)

Query: 68  HSIYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI 126
           H++ A G   + Q+ + N  + +W   ++ L S  H   +V   AG+      R    + 
Sbjct: 5   HAVLAWGSGEDGQLGVGNMEDKDWVCSIQALAS--HGKRVVSVVAGS------RNSLAIC 56

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
            +  +F+ G +  G LGH PE+    + T++       +VQ +    H   V   GQ + 
Sbjct: 57  EDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYA 116

Query: 187 CGDNSSFCCGH----RDTNRPIFRPRLVEALKGVP---CKQVTAGLNFTGFLTIRGHVHT 239
            G N    CG     ++    + R  +    +  P    +QV AG   +  LT  GHV T
Sbjct: 117 WGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGHVWT 176

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G         GD     TP  +  LE   +V  IA G  + LA+   G V+++G+    
Sbjct: 177 WGQ----PWPPGDIKQISTPVRVQGLE---NVQLIAVGAFHNLALLEEGEVWAWGNNEYG 229

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G+     QP  +Q     G+ +  ++AG  H  AL +   VY WG+G  G LG GD
Sbjct: 230 QLGTGDTQPRSQPVPVQGL--SGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGD 287

Query: 360 EI-DKTLPEPLSSLKSHLAVQ 379
           +   K +P+ +  L      Q
Sbjct: 288 DKSSKMVPQKVHLLAGETIAQ 308



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 13/195 (6%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSAS 171
           Q+  G  H+++++ N  V++ G          P  +  Q  +  R+       ++ V A 
Sbjct: 157 QVAAGGTHSVVLTHNGHVWTWGQPW-------PPGDIKQISTPVRVQGLENVQLIAVGAF 209

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            N A  +L+ G+V+  G+N     G  DT +P  +P  V+ L G+    + AG   +  L
Sbjct: 210 HNLA--LLEEGEVWAWGNNEYGQLGTGDT-QPRSQPVPVQGLSGLILADIAAGGWHSTAL 266

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T    V+  G   HG+LG GD            L    ++ Q++ G ++ +A T +G ++
Sbjct: 267 TTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIF 326

Query: 292 SFGSGSNFCLGHGEQ 306
           S+G   +  LG+G +
Sbjct: 327 SYGRADHGRLGYGRK 341



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 3/152 (1%)

Query: 113 NMQ-ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           N+Q I  G +H L L+    V++ G++  G LG G +T        +   S   +  ++A
Sbjct: 200 NVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTG-DTQPRSQPVPVQGLSGLILADIAA 258

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+  +    +V+  G       G  D       P+ V  L G    QV+ G   +  
Sbjct: 259 GGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVA 318

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  G + + G   HG+LG+G  +    P  +
Sbjct: 319 RTADGRIFSYGRADHGRLGYGRKVTTGHPMEV 350


>gi|145539346|ref|XP_001455363.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423171|emb|CAK87966.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 35/298 (11%)

Query: 125 LISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           L S  S+F+ GSS  G LG+     +  + VS  ++      +V QV   +NH+A +   
Sbjct: 9   LFSTGSLFTWGSS-NGSLGYAVGSQQQMKGVSMPQLVKGFNNNVAQVQMGQNHSALITSE 67

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHT 239
           G+++T G  +S   GH + ++    P+LVE      +  KQV  G   T  LT  G V T
Sbjct: 68  GELYTWGTGNSGQLGH-NNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWT 126

Query: 240 CGSNTH-------------GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            G                 G LGHG++ +R TP  +  L  +  +  I +G  +  A+  
Sbjct: 127 WGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIKYIQSGLRFTNAINE 186

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-----RRKGIHVVRVSAGDEHVVALDSS 341
           N  +Y +G G     G G       P+  + F     +++ + +V++ + + + VAL S 
Sbjct: 187 NNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQNLSIVKLKSCNNYSVALMSD 246

Query: 342 GYVYTWGKGYCGALG----HGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQED 395
           G +Y WG    G +G     G EI +T   P   LK            ++   +V ED
Sbjct: 247 GNLYGWGSNDFGQIGVKIEIGVEIYETANFPTQVLKDKFGDN------KIVDFVVAED 298



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 17/161 (10%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTG 286
           +L   G + T GS ++G LG+     +       P    G   +V Q+  G ++   +T 
Sbjct: 8   YLFSTGSLFTWGS-SNGSLGYAVGSQQQMKGVSMPQLVKGFNNNVAQVQMGQNHSALITS 66

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G +Y++G+G++  LGH    D + P+ ++ F +  + V +V+ GD H VAL   G V+T
Sbjct: 67  EGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWT 126

Query: 347 WGKG-------------YCGALGHGDEIDKTLPEPLSSLKS 374
           WG G               GALGHG+  ++  P P+ +L+S
Sbjct: 127 WGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRS 167


>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
 gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
          Length = 538

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 4/278 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           ++G    ++  +  V++ GS+    LG G +    +   +I+      +V +   S  H 
Sbjct: 36  SSGNEAIVITQDDDVYALGSNCSSCLGVG-DAQSGLEPRKIDILCKKKIVDIGYGSGPHV 94

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
                +G +++ G N     G+  TN+ +    +   L G    +V  G + +  LT+ G
Sbjct: 95  LVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEG 154

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQ+G G T ++ TP+ +A       V +IA G +  +A+  NG VY +G 
Sbjct: 155 EVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGY 214

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++  P  +   ++  + VV++  G  H +AL   G VY WG    G L
Sbjct: 215 NGNGQLGVGNNVNQPNPCRVAALQQ--MIVVQIVCGYAHAMALTDEGSVYAWGANSYGQL 272

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQGLSVLAEVCPTIVQ 393
           G G++ +   P  ++  K      G +    V   I Q
Sbjct: 273 GTGNKANLVTPTKIALDKGRFVEIGATHYNHVSSAITQ 310


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 120/266 (45%), Gaps = 23/266 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGTHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G        +P +I   +  G  VV +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG--VVYISCGDEHTAVLTQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPE 367
           G V+T+G    G LG+    +K  P+
Sbjct: 255 GKVFTFGDNCSGQLGYSPTPEKRGPQ 280



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 7/211 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGTHSFALSL 198

Query: 341 SGYVYTWGKGYCGALG-HGDEIDKTLPEPLS 370
            G  + WG    G L   G  +     +PLS
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPAQSNKPLS 229



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 12/185 (6%)

Query: 193 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
           FC G   R+  R     R      G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE 309
                   P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   
Sbjct: 58  RGAQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS 116

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 368
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 369 LSSLK 373
           + SL+
Sbjct: 175 VRSLE 179


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.135    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,423,077,173
Number of Sequences: 23463169
Number of extensions: 267364808
Number of successful extensions: 663007
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3317
Number of HSP's successfully gapped in prelim test: 1854
Number of HSP's that attempted gapping in prelim test: 594119
Number of HSP's gapped (non-prelim): 26995
length of query: 410
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 265
effective length of database: 8,957,035,862
effective search space: 2373614503430
effective search space used: 2373614503430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)