Query 015254
Match_columns 410
No_of_seqs 197 out of 1707
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 09:23:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015254hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 5.2E-63 1.8E-67 498.3 36.1 332 20-375 24-421 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 2.2E-60 7.7E-65 477.3 40.0 343 19-395 16-365 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 4.2E-59 1.4E-63 463.0 38.1 331 19-379 10-375 (376)
4 1czf_A Polygalacturonase II; b 100.0 1.3E-57 4.6E-62 448.2 33.7 315 38-378 35-358 (362)
5 2iq7_A Endopolygalacturonase; 100.0 7.4E-56 2.5E-60 433.3 35.1 319 36-378 6-333 (339)
6 1hg8_A Endopolygalacturonase; 100.0 1.5E-55 5.1E-60 432.2 37.2 320 37-378 7-345 (349)
7 1nhc_A Polygalacturonase I; be 100.0 6.7E-56 2.3E-60 433.1 33.6 319 35-378 5-332 (336)
8 1ia5_A Polygalacturonase; glyc 100.0 3.2E-55 1.1E-59 428.5 36.0 325 22-378 2-335 (339)
9 2uvf_A Exopolygalacturonase; G 100.0 4.3E-55 1.5E-59 457.5 37.2 330 20-364 153-565 (608)
10 1k5c_A Endopolygalacturonase; 100.0 1.9E-55 6.4E-60 428.7 25.9 311 38-378 8-329 (335)
11 2x6w_A Tail spike protein; vir 100.0 2.1E-47 7.2E-52 387.3 20.2 293 21-364 49-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 4.5E-41 1.5E-45 345.8 19.3 277 52-363 197-521 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 2E-39 6.9E-44 333.3 24.2 269 52-363 229-546 (574)
14 3gq8_A Preneck appendage prote 100.0 5.6E-37 1.9E-41 312.6 30.9 269 19-335 18-309 (609)
15 3gqn_A Preneck appendage prote 100.0 1.1E-36 3.7E-41 314.8 28.7 269 19-335 18-309 (772)
16 1h80_A IOTA-carrageenase; hydr 100.0 2.1E-36 7.3E-41 304.3 28.8 295 20-362 18-360 (464)
17 2pyg_A Poly(beta-D-mannuronate 100.0 2.4E-28 8.3E-33 242.4 28.3 217 23-265 2-246 (377)
18 2vbk_A Tailspike-protein; vira 100.0 6.2E-30 2.1E-34 247.0 13.6 231 21-294 49-315 (514)
19 3jur_A EXO-poly-alpha-D-galact 99.9 6.3E-25 2.1E-29 221.1 26.3 230 100-363 190-444 (448)
20 2uvf_A Exopolygalacturonase; G 99.9 1.9E-22 6.4E-27 210.9 27.4 246 100-385 331-606 (608)
21 3eqn_A Glucan 1,3-beta-glucosi 99.9 6.7E-22 2.3E-26 204.8 23.5 263 21-334 47-329 (758)
22 1ia5_A Polygalacturonase; glyc 99.9 3.7E-20 1.3E-24 180.5 28.3 204 144-373 66-306 (339)
23 1bhe_A PEHA, polygalacturonase 99.9 4.3E-20 1.5E-24 182.8 29.0 219 77-335 109-364 (376)
24 2iq7_A Endopolygalacturonase; 99.9 6.3E-20 2.2E-24 178.9 28.4 204 144-373 62-304 (339)
25 1czf_A Polygalacturonase II; b 99.9 4.5E-20 1.5E-24 181.2 26.3 203 144-373 89-329 (362)
26 1nhc_A Polygalacturonase I; be 99.9 1.3E-19 4.5E-24 176.5 28.0 203 144-373 62-303 (336)
27 1hg8_A Endopolygalacturonase; 99.9 2.5E-19 8.6E-24 175.2 27.3 218 77-335 69-334 (349)
28 1rmg_A Rgase A, rhamnogalactur 99.8 3.1E-18 1.1E-22 171.5 32.6 169 167-364 129-311 (422)
29 1k5c_A Endopolygalacturonase; 99.8 1.4E-18 4.9E-23 168.8 23.0 201 144-374 60-301 (335)
30 1ogo_X Dextranase; hydrolase, 99.8 9.8E-18 3.3E-22 172.4 22.9 233 55-335 265-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.8 7.4E-18 2.5E-22 173.3 21.8 248 54-335 222-521 (549)
32 2inu_A Insulin fructotransfera 99.6 6.7E-14 2.3E-18 136.0 18.7 223 18-274 9-283 (410)
33 3gq8_A Preneck appendage prote 99.5 1.5E-11 5E-16 125.9 31.9 224 100-364 134-401 (609)
34 3gqn_A Preneck appendage prote 99.5 1.5E-11 5.1E-16 127.9 31.2 224 100-364 134-401 (772)
35 1h80_A IOTA-carrageenase; hydr 99.5 1.2E-12 4E-17 131.7 18.9 159 148-344 106-279 (464)
36 2x6w_A Tail spike protein; vir 99.4 3.1E-12 1.1E-16 130.3 17.1 206 77-335 150-384 (600)
37 2pyg_A Poly(beta-D-mannuronate 99.4 8.5E-11 2.9E-15 116.0 22.8 194 144-364 150-361 (377)
38 1dbg_A Chondroitinase B; beta 99.2 5.3E-10 1.8E-14 113.5 18.7 202 1-236 1-240 (506)
39 1ru4_A Pectate lyase, PEL9A; p 99.1 2.6E-09 8.8E-14 105.9 19.8 245 18-303 11-299 (400)
40 3eqn_A Glucan 1,3-beta-glucosi 99.0 2E-09 6.7E-14 112.1 12.2 86 21-115 398-494 (758)
41 3zsc_A Pectate trisaccharide-l 98.7 2E-06 6.9E-11 82.7 21.6 77 191-267 115-195 (340)
42 1pcl_A Pectate lyase E; lyase 98.7 1.4E-06 4.6E-11 84.7 20.2 112 144-267 97-228 (355)
43 1pxz_A Major pollen allergen J 98.6 1.1E-06 3.7E-11 85.2 17.5 160 144-331 107-272 (346)
44 1idk_A Pectin lyase A; signal, 98.6 1.5E-06 5.2E-11 84.5 16.7 86 172-266 131-233 (359)
45 2qy1_A Pectate lyase II; GAG l 98.5 1.8E-06 6.1E-11 83.2 15.8 119 191-331 112-250 (330)
46 1qcx_A Pectin lyase B; beta-he 98.5 4.4E-06 1.5E-10 81.3 17.7 115 190-333 151-282 (359)
47 3uw0_A Pectinesterase; right-h 98.4 6.1E-06 2.1E-10 80.2 16.2 82 144-234 116-218 (364)
48 1gq8_A Pectinesterase; hydrola 98.4 1.7E-05 5.8E-10 75.9 18.1 208 40-297 21-244 (319)
49 3vmv_A Pectate lyase; polysacc 98.3 2.3E-05 7.9E-10 75.0 18.2 133 174-330 103-249 (326)
50 1xg2_A Pectinesterase 1; prote 98.3 1.4E-05 4.8E-10 76.4 16.6 208 40-297 17-240 (317)
51 2o04_A Pectate lyase, PL; hexa 98.3 1.1E-05 3.8E-10 79.4 14.3 76 191-266 182-276 (399)
52 3zsc_A Pectate trisaccharide-l 98.3 7.2E-05 2.5E-09 71.9 19.3 154 109-298 62-251 (340)
53 1pe9_A Pectate lyase A; parall 98.2 1.9E-05 6.6E-10 76.7 15.2 76 191-266 142-238 (361)
54 1pxz_A Major pollen allergen J 98.2 2.1E-05 7.1E-10 76.2 15.3 133 151-297 88-227 (346)
55 1air_A Pectate lyase C, PELC; 98.2 2.4E-05 8.2E-10 75.9 14.9 160 145-330 82-260 (353)
56 2inu_A Insulin fructotransfera 98.1 0.00022 7.5E-09 69.5 19.3 132 151-304 136-283 (410)
57 2x3h_A K5 lyase, K5A lyase; ba 98.1 0.0025 8.6E-08 59.0 24.4 191 20-245 61-271 (542)
58 1vbl_A Pectate lyase 47; PL 47 98.0 2.6E-05 9E-10 77.1 11.6 101 166-266 148-282 (416)
59 1idk_A Pectin lyase A; signal, 97.9 0.00025 8.5E-09 68.9 15.5 156 110-299 103-282 (359)
60 1vbl_A Pectate lyase 47; PL 47 97.9 0.00055 1.9E-08 67.6 17.7 113 144-266 149-304 (416)
61 2nsp_A Pectinesterase A; micha 97.8 0.00073 2.5E-08 65.2 17.8 81 144-234 90-191 (342)
62 1air_A Pectate lyase C, PELC; 97.7 0.00051 1.7E-08 66.5 14.7 140 144-301 104-265 (353)
63 1qcx_A Pectin lyase B; beta-he 97.7 0.00063 2.1E-08 66.1 14.7 135 144-300 125-283 (359)
64 1ru4_A Pectate lyase, PEL9A; p 97.6 0.00043 1.5E-08 68.3 12.1 110 144-267 109-231 (400)
65 2qy1_A Pectate lyase II; GAG l 97.5 0.00068 2.3E-08 65.1 12.0 140 144-301 87-254 (330)
66 3vmv_A Pectate lyase; polysacc 97.5 0.0077 2.6E-07 57.5 18.5 135 144-296 96-249 (326)
67 1pe9_A Pectate lyase A; parall 96.7 0.01 3.5E-07 57.5 11.1 112 144-265 104-259 (361)
68 2o04_A Pectate lyase, PL; hexa 96.5 0.021 7.1E-07 56.0 12.0 112 144-266 144-298 (399)
69 1pcl_A Pectate lyase E; lyase 96.3 0.021 7.2E-07 55.2 10.8 116 166-297 96-228 (355)
70 3grh_A YBHC, acyl-COA thioeste 96.1 0.1 3.6E-06 51.1 14.7 45 39-85 90-136 (422)
71 3t9g_A Pectate lyase; PL3, par 96.1 0.54 1.9E-05 40.6 17.0 103 176-298 54-159 (196)
72 3t9g_A Pectate lyase; PL3, par 96.0 0.33 1.1E-05 42.0 15.5 133 150-298 51-183 (196)
73 1gq8_A Pectinesterase; hydrola 96.0 0.16 5.5E-06 48.2 14.8 112 172-296 92-209 (319)
74 1xg2_A Pectinesterase 1; prote 95.6 0.17 5.9E-06 48.0 13.4 112 172-296 88-205 (317)
75 2vbk_A Tailspike-protein; vira 95.5 0.092 3.2E-06 51.5 11.0 78 143-238 196-287 (514)
76 1ee6_A Pectate lyase; parallel 95.3 0.36 1.2E-05 41.9 13.2 108 150-267 47-154 (197)
77 1dbg_A Chondroitinase B; beta 94.8 0.16 5.4E-06 51.4 11.0 141 150-297 227-392 (506)
78 3b4n_A Endo-pectate lyase; pec 93.7 4.4 0.00015 38.1 17.3 16 110-126 124-139 (344)
79 2nsp_A Pectinesterase A; micha 93.5 0.61 2.1E-05 44.7 11.6 112 172-296 94-230 (342)
80 1ee6_A Pectate lyase; parallel 93.3 2 7E-05 37.2 13.4 108 174-301 48-158 (197)
81 3uw0_A Pectinesterase; right-h 90.4 3.9 0.00013 39.4 13.3 113 172-296 120-255 (364)
82 3riq_A Tailspike protein; righ 85.1 8.1 0.00028 37.3 11.3 60 200-262 262-343 (543)
83 3b4n_A Endo-pectate lyase; pec 77.2 23 0.00077 33.3 11.2 50 175-231 159-209 (344)
84 2vfm_A Bifunctional tail prote 64.0 35 0.0012 32.3 9.3 81 200-296 269-373 (559)
85 2v5i_A Salmonella typhimurium 63.0 35 0.0012 32.3 9.0 120 200-335 272-427 (559)
86 2xc1_A Bifunctional tail prote 53.5 65 0.0022 31.8 9.4 81 200-296 376-480 (666)
87 3ju4_A Endo-N-acetylneuraminid 47.6 6.9 0.00024 38.1 1.7 19 29-47 4-24 (670)
88 2yuh_A Tubulin-specific chaper 44.0 24 0.00081 30.1 4.4 12 144-155 70-81 (179)
89 3bh7_B Protein XRP2; protein-p 32.5 76 0.0026 30.1 6.3 12 144-155 82-93 (352)
90 2vfm_A Bifunctional tail prote 31.6 3.4E+02 0.012 25.7 12.1 67 223-292 269-352 (559)
91 2v5i_A Salmonella typhimurium 31.5 3.4E+02 0.012 25.7 12.9 67 223-292 272-355 (559)
92 2xc1_A Bifunctional tail prote 28.9 4.3E+02 0.015 26.1 12.1 68 223-293 376-460 (666)
93 1z65_A PRPLP, prion-like prote 26.8 47 0.0016 19.2 2.3 19 4-22 9-27 (30)
94 2jna_A Putative secreted prote 26.3 4.3 0.00015 31.6 -2.9 22 23-44 40-63 (104)
95 2x3h_A K5 lyase, K5A lyase; ba 24.4 4.3E+02 0.015 24.5 18.3 110 144-261 130-261 (542)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=5.2e-63 Score=498.27 Aligned_cols=332 Identities=21% Similarity=0.301 Sum_probs=294.5
Q ss_pred cceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEeeeeEecCCCCccEEEEEeeEEEeeCCccCc-
Q 015254 20 AALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQLSPVTMEGPCKAAIELQVKGTLKALTDPANV- 96 (410)
Q Consensus 20 ~~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~- 96 (410)
.+.+++|++|||+|| +|||+|||+||+ +|++.+|++|+||+|+|++++|.|+ ++++|+++|+|++++++.+|
T Consensus 24 ~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~ggg~v~vP~G~yl~~~l~l~----s~v~l~l~gtL~~s~d~~~y~ 98 (448)
T 3jur_A 24 PDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQGGGRLIVPEGVFLTGPIHLK----SNIELHVKGTIKFIPDPERYL 98 (448)
T ss_dssp CSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHHTCEEEEECSSEEEESCEECC----TTEEEEESSEEEECCCGGGGC
T ss_pred CCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhcCCeEEEECCCcEEEeeeEeC----CCcEEEEEEEEEecCCHHHhC
Confidence 477999999999999 999999999996 5665567999999999999999998 99999999999999999888
Q ss_pred cC------------CCccEEEEeeeeEEEEeCeEecCCC--CCCCccccc-C----------------------------
Q 015254 97 KD------------AGSWVSFNKIEHLTVSGGGTFDGQG--AVAPSECEK-D---------------------------- 133 (410)
Q Consensus 97 ~~------------~~~~i~~~~~~nv~I~G~G~idG~g--~~~~~~~~~-~---------------------------- 133 (410)
+. ..+||.+.+++||+|+|.|+|||+| +.||+.... .
T Consensus 99 p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~ 178 (448)
T 3jur_A 99 PVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVE 178 (448)
T ss_dssp SCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHHTCCGG
T ss_pred cccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcccCcch
Confidence 21 1468999999999999999999999 899963210 0
Q ss_pred -----CCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEee
Q 015254 134 -----DYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDS 208 (410)
Q Consensus 134 -----~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~ 208 (410)
.....||+ +|.|.+|+|++|++++++|+|.|++++..|+|++|++++|.++ ++|+||||+.+|++|+|+||
T Consensus 179 ~~~~~~~~~~RP~--~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I~n~ 254 (448)
T 3jur_A 179 ERVFGKGHYLRPS--FVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKC 254 (448)
T ss_dssp GCBCSTTCCCCCC--SEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEEESC
T ss_pred hhhccccccCCce--EEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEEEee
Confidence 12246899 9999999999999999999999999999999999999999997 58999999999999999999
Q ss_pred EEecCCceEEecCC-----------ceeEEEEeEEE--cCCc-eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEe
Q 015254 209 KIGTGDDCISIGDG-----------TQQMEINKIDC--GPGH-GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKT 274 (410)
Q Consensus 209 ~i~~gdD~i~i~s~-----------~~nv~I~n~~~--~~~~-Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks 274 (410)
+|.++||||+++++ ++||+|+||+| ..+| |++|||+ ..+.++||+|+||++.++.+|++||+
T Consensus 255 ~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~GirIKt 330 (448)
T 3jur_A 255 RFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERALRLKT 330 (448)
T ss_dssp EEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEEEEEC
T ss_pred EEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceEEEEE
Confidence 99999999999998 89999999999 5677 8999998 46789999999999999999999999
Q ss_pred cCCCCCcceeeEEEEeEEEecCCccE-EEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecCcceEEEecCCCCceecE
Q 015254 275 WPASYPGTASDLHFEDIKMNNVSNPI-LLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLACSGGVPCEGV 353 (410)
Q Consensus 275 ~~g~~~g~v~nI~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~~~~~~~~ni 353 (410)
+.++ +|.|+||+|+||+++++.+++ .|++.|+... ....+.|+||+|+||+++. ...++.+.|.+..||+||
T Consensus 331 ~~g~-gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~~~I 403 (448)
T 3jur_A 331 NSRR-GGYMENIFFIDNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYVKDI 403 (448)
T ss_dssp CTTT-CSEEEEEEEESCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCEEEE
T ss_pred EcCC-CceEeeEEEEEEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCEeeE
Confidence 9877 599999999999999999988 9999987641 1234589999999999998 567899999999999999
Q ss_pred EEEeEEEEecCCCCCCceeeee
Q 015254 354 ELADISLTYTGPEGPIKSECTN 375 (410)
Q Consensus 354 ~~~nv~i~~~~~~~~~~~~c~n 375 (410)
+|+||+++.... ...|.+
T Consensus 404 ~~~nv~i~~~~~----~~~~~~ 421 (448)
T 3jur_A 404 LISDTIIEGAKI----SVLLEF 421 (448)
T ss_dssp EEEEEEEESCSE----EEEEEE
T ss_pred EEEEEEEEcccc----ceeEec
Confidence 999999986542 245665
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=2.2e-60 Score=477.28 Aligned_cols=343 Identities=22% Similarity=0.371 Sum_probs=296.3
Q ss_pred ccceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEee-eeEecCCCCccEEEEEeeEEEeeCCcc-
Q 015254 19 AAALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQLS-PVTMEGPCKAAIELQVKGTLKALTDPA- 94 (410)
Q Consensus 19 ~~~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~-~l~l~~~~~s~v~l~~~G~i~~~~~~~- 94 (410)
++...++|++|||++| +|||+|||+||+ +|+. +++|+||+|+|+++ +|.|+++ ++++|+++|+++...+..
T Consensus 16 ~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~~--g~~V~vP~G~Yli~~~l~l~g~--s~v~l~l~G~~l~~~~~~~ 90 (422)
T 1rmg_A 16 GATKTCNILSYGAVADNSTDVGPAITSAWA-ACKS--GGLVYIPSGNYALNTWVTLTGG--SATAIQLDGIIYRTGTASG 90 (422)
T ss_dssp HHHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHTB--TCEEEECSSEEEECSCEEEESC--EEEEEEECSEEEECCCCSS
T ss_pred cCCcEEEeeeccccCCCCcccHHHHHHHHH-HCCC--CCEEEECCCeEEeCCceeecCC--CeEEEEEcCcEEcccCCCC
Confidence 3467999999999999 999999999996 6763 68999999999998 4999975 799999999988754321
Q ss_pred CccCCCccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCee
Q 015254 95 NVKDAGSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAK 174 (410)
Q Consensus 95 ~~~~~~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~ 174 (410)
.| -.++...+++++.|+|.|+|||+|+.||.. ...||. ++.+.+|+|++|++++++|++.|++++..|+
T Consensus 91 ~~---~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~------~~~rp~--~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~ 159 (422)
T 1rmg_A 91 NM---IAVTDTTDFELFSSTSKGAVQGFGYVYHAE------GTYGAR--ILRLTDVTHFSVHDIILVDAPAFHFTMDTCS 159 (422)
T ss_dssp EE---EEEEEEEEEEEECSSSCCEEECCTHHHHTT------TCCCCE--EEEEEEEEEEEEEEEEEECCSSCSEEEEEEE
T ss_pred ce---EEEEecCceeEEeeccCEEEECCcchhhcC------CCCCce--EEEEcccceEEEECeEEECCCceEEEEeCcC
Confidence 22 123345566667778999999999999952 123899 9999999999999999999999999999999
Q ss_pred eEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCCCCCEE
Q 015254 175 NFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQNEQPVV 254 (410)
Q Consensus 175 nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~ 254 (410)
|++|+|++|.+ .+.+++|||++.+ ++|+|+||+|.++||||+++++++||+|+||+|..+||++|||+|. .+.++
T Consensus 160 nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~---~~~v~ 234 (422)
T 1rmg_A 160 DGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGA---DTDVT 234 (422)
T ss_dssp EEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECT---TEEEE
T ss_pred CEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCC---CCcEE
Confidence 99999999999 4457999999999 9999999999999999999999999999999999999999999863 35899
Q ss_pred EEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEee
Q 015254 255 GIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTS 334 (410)
Q Consensus 255 nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~ 334 (410)
||+|+||+|.++.+|++||++.+. |.++||+|+||+++++.++|.|++.|+.... ...+.+.|+||+|+||+++.
T Consensus 235 nV~v~n~~~~~~~~Gi~Ikt~~g~--G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~---~~~~~~~i~nI~~~nI~gt~ 309 (422)
T 1rmg_A 235 DIVYRNVYTWSSNQMYMIKSNGGS--GTVSNVLLENFIGHGNAYSLDIDGYWSSMTA---VAGDGVQLNNITVKNWKGTE 309 (422)
T ss_dssp EEEEEEEEEESSSCSEEEEEBBCC--EEEEEEEEEEEEEEEESCSEEEETBCTTSCC---BSSSCCEEEEEEEEEEEEEE
T ss_pred EEEEEeEEEeccceEEEEEecCCC--cEEEEEEEEeEEEECccccEEEEeeccCCCc---ccCCCceEEEEEEEeEEEEe
Confidence 999999999999999999997643 8999999999999999999999998876422 23456799999999999998
Q ss_pred cC---cceEEEecCCCCceecEEEEeEEEEecCCCCCCceeeeeccccCCCcccCCCCCCCCCC
Q 015254 335 AT---AVAIKLACSGGVPCEGVELADISLTYTGPEGPIKSECTNIQPKTSGKMNPPPCIASATP 395 (410)
Q Consensus 335 ~~---~~~~~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~~~~~~~~~~~c~~~~~~ 395 (410)
.. ..++.|.|.+..+|+||+|+||+++.+.+. +..+.|+|+.+.. .|..++.|
T Consensus 310 ~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~-~~~~~C~n~~g~g-------~C~~~~~~ 365 (422)
T 1rmg_A 310 ANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGS-SELYLCRSAYGSG-------YCLKDSSS 365 (422)
T ss_dssp SCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSS-CEEEEEESEEEES-------TTCBCCSS
T ss_pred cccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCC-ccceEEECCCccc-------cccCCCCC
Confidence 53 357899999999999999999999988764 5578999999763 68877555
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=4.2e-59 Score=463.02 Aligned_cols=331 Identities=24% Similarity=0.397 Sum_probs=290.1
Q ss_pred ccceeeEeecCCCcCCchhHHHHHHHHHHHhhcCCCcEEEEcC---ceEEeeeeEecCCCCccEEEEEee--EEEeeCCc
Q 015254 19 AAALDVDVTKHGAKQNADISQALRDAWKEACAATTPSKVLIPQ---GTYQLSPVTMEGPCKAAIELQVKG--TLKALTDP 93 (410)
Q Consensus 19 ~~~~~~~v~d~Ga~gdtDdt~aiq~Ai~~a~~~~~g~~v~~P~---G~Y~i~~l~l~~~~~s~v~l~~~G--~i~~~~~~ 93 (410)
..+.+|+|++||+ +|||+|||+||+ ||++ |++|+||+ |+|++++|.|+ |+++|++++ +|+++.++
T Consensus 10 ~~p~~~~v~~~G~---~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g~yl~g~i~l~----s~vtL~l~~Ga~L~~s~~~ 79 (376)
T 1bhe_A 10 KTPSSCTTLKADS---STATSTIQKALN-NCDQ--GKAVRLSAGSTSVFLSGPLSLP----SGVSLLIDKGVTLRAVNNA 79 (376)
T ss_dssp CCCCEEEEEECCS---SBCHHHHHHHHT-TCCT--TCEEEEECSSSSEEEESCEECC----TTCEEEECTTCEEEECSCS
T ss_pred CCCCeEEECCCCC---CccHHHHHHHHH-Hhcc--CCcEEEECCCCceEEEeEEEEC----CCCEEEECCCeEEEeCCCH
Confidence 3455799999986 789999999996 6875 46777765 79999999999 999999995 89999888
Q ss_pred cCccCC--------------CccEEEEeeeeEEEEeCeEecCCC--------CCCCcccc---cCCCCCCCCeeeeEEEE
Q 015254 94 ANVKDA--------------GSWVSFNKIEHLTVSGGGTFDGQG--------AVAPSECE---KDDYCKKRPIVSNLSFN 148 (410)
Q Consensus 94 ~~~~~~--------------~~~i~~~~~~nv~I~G~G~idG~g--------~~~~~~~~---~~~~~~~~p~~w~i~~~ 148 (410)
..|+.. .+||.+.+++||+|+|.|+|||+| +.||+... .......||. +|.|.
T Consensus 80 ~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~--~i~~~ 157 (376)
T 1bhe_A 80 KSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPR--LIQIN 157 (376)
T ss_dssp GGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCC--SEEEE
T ss_pred HHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCe--EEEEE
Confidence 888531 479999999999999999999999 57885211 1111235899 99999
Q ss_pred eeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEEecC-----Cc
Q 015254 149 AITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCISIGD-----GT 223 (410)
Q Consensus 149 ~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s-----~~ 223 (410)
+|+|++|++++++|+|.|++++..|++++|+|++|.++..++|+||||+.+|++|+|+||+|.++||||++++ ++
T Consensus 158 ~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s 237 (376)
T 1bhe_A 158 KSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAET 237 (376)
T ss_dssp SCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCE
T ss_pred cceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCc
Confidence 9999999999999999999999999999999999999888899999999999999999999999999999996 79
Q ss_pred eeEEEEeEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCccEEEE
Q 015254 224 QQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSNPILLD 303 (410)
Q Consensus 224 ~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~~i~i~ 303 (410)
+||+|+||+|..+||++|||+. . .++||+|+||+|.++.+|++||+++++ +|.|+||+|+||+|+++.+||.|+
T Consensus 238 ~nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g~-~G~v~ni~f~ni~~~~v~~~i~i~ 311 (376)
T 1bhe_A 238 RNISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKSA-AGVVNGVRYSNVVMKNVAKPIVID 311 (376)
T ss_dssp EEEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTTT-CCEEEEEEEEEEEEESCSEEEEEE
T ss_pred eEEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecCC-CceEeeEEEEeEEEeCCCceEEEE
Confidence 9999999999999999999984 3 899999999999999999999999876 599999999999999999999999
Q ss_pred eeeCCCCCCCCCCCCceeEEeEEEEeEEEeecCcceEEEecCCCCceecEEEEeEEEEecCCCCCCceeeeecccc
Q 015254 304 QVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLACSGGVPCEGVELADISLTYTGPEGPIKSECTNIQPK 379 (410)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~~ 379 (410)
+.|++.. ....+.|+||+|+||+++... ++.|.|.++.||++|+|+||++.... .+.|+|++..
T Consensus 312 ~~y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~~-----~~~~~~~~~~ 375 (376)
T 1bhe_A 312 TVYEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSDS-----TWQIKNVNVK 375 (376)
T ss_dssp TTSSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTTC-----EEEEESEEEE
T ss_pred eeccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecCC-----CceEEEEEec
Confidence 9987642 123458999999999999753 68899999999999999999997653 4899998753
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.3e-57 Score=448.20 Aligned_cols=315 Identities=25% Similarity=0.428 Sum_probs=274.6
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEcCceEEeeee-EecCCCCccEEEEEeeEEEeeCCccCccCCCccEEEEeeeeEEEEe-
Q 015254 38 SQALRDAWKEACAATTPSKVLIPQGTYQLSPV-TMEGPCKAAIELQVKGTLKALTDPANVKDAGSWVSFNKIEHLTVSG- 115 (410)
Q Consensus 38 t~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G- 115 (410)
++|||+|+ ++|+..++++|+||+|+|+. | .|+ ++++|+++|++.+ +...|+ ++||.+.+ +||+|+|
T Consensus 35 ~~aiq~ai-~~c~~~~g~~v~vP~G~~l~--l~~l~----~~~~l~~~g~~~~--~~~~w~--g~~i~~~~-~nv~I~G~ 102 (362)
T 1czf_A 35 AAAAKAGK-AKCSTITLNNIEVPAGTTLD--LTGLT----SGTKVIFEGTTTF--QYEEWA--GPLISMSG-EHITVTGA 102 (362)
T ss_dssp HHHHHHHG-GGCSEEEEESCEECTTCCEE--ECSCC----TTCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEEEEC
T ss_pred HHHHHHHH-HHhhccCCCEEEECCCEEEE--eeccC----CCeEEEEeCcEEe--ccccCC--CcEEEEeC-ccEEEEcC
Confidence 77899997 56877667899999999873 3 344 7999999999876 346787 58999866 9999999
Q ss_pred -CeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCC-C---CC
Q 015254 116 -GGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPE-E---SL 190 (410)
Q Consensus 116 -~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~-~---~~ 190 (410)
.|+|||+|+.||+.... ....||+ ++.+.+|+|++|++++++|+|.|++++. |+|++|+|++|.++. + ++
T Consensus 103 ~~g~IdG~G~~~w~~~~~--~~~~rP~--~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ 177 (362)
T 1czf_A 103 SGHLINCDGARWWDGKGT--SGKKKPK--FFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGH 177 (362)
T ss_dssp TTCEEECCGGGTCCSCTT--SSSCCCC--CEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCC
T ss_pred CCcEEECCCchhhcccCC--CCCCCCe--EEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCC
Confidence 69999999999974332 2467899 9999999999999999999999999999 999999999999964 3 68
Q ss_pred CCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCCeeE
Q 015254 191 NTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTSNGV 270 (410)
Q Consensus 191 n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi 270 (410)
|+||||+.+|+||+|+||++.++||||+++++ +||+|+||+|..+||++|||+|.+ +.+.++||+|+||+|.++.+|+
T Consensus 178 NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~t~~Gi 255 (362)
T 1czf_A 178 NTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSG-ENIWFTGGTCIGGHGLSIGSVGDR-SNNVVKNVTIEHSTVSNSENAV 255 (362)
T ss_dssp SCCSEEECSCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSCCEEEEEECSS-SCCEEEEEEEEEEEEEEEEEEE
T ss_pred CCCceeecCcceEEEEeeEEecCCCEEEEeCC-eEEEEEEEEEeCCceeEEeecccc-CCCCEEEEEEEeeEEECCceEE
Confidence 99999999999999999999999999999995 999999999999999999999765 5689999999999999999999
Q ss_pred EEEecCCCCCcceeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecC-cceEEEecCCCC
Q 015254 271 RIKTWPASYPGTASDLHFEDIKMNNVS-NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSAT-AVAIKLACSGGV 348 (410)
Q Consensus 271 ~iks~~g~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~-~~~~~i~~~~~~ 348 (410)
+||+++++ +|.++||+|+||+++++. +||.|++.|++.. +.+.+.+.++|+||+|+||+++... ..++.+.|+ ..
T Consensus 256 rIKt~~g~-~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~-~~ 332 (362)
T 1czf_A 256 RIKTISGA-TGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTIQDVKLESVTGSVDSGATEIYLLCG-SG 332 (362)
T ss_dssp EEEEETTC-CEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-TT
T ss_pred EEEEeCCC-CceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceEEEEEEEEEEEEecCCceEEEEEeC-CC
Confidence 99999977 599999999999999997 6999999998642 2223345689999999999999875 568999998 78
Q ss_pred ceecEEEEeEEEEecCCCCCCceeeeeccc
Q 015254 349 PCEGVELADISLTYTGPEGPIKSECTNIQP 378 (410)
Q Consensus 349 ~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~ 378 (410)
||+||+|+||+++... ....|+|+..
T Consensus 333 ~c~ni~~~nv~i~~~~----~~~~C~n~~~ 358 (362)
T 1czf_A 333 SCSDWTWDDVKVTGGK----KSTACKNFPS 358 (362)
T ss_dssp TEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred cCcCEEEEeEEEEcCC----CcccCcCCCC
Confidence 9999999999998532 3467999874
No 5
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=7.4e-56 Score=433.27 Aligned_cols=319 Identities=22% Similarity=0.399 Sum_probs=277.2
Q ss_pred hhHHHHHHHHHHHhhcCCCcEEEEcCceEEeeee-EecCCCCccEEEEEeeEEEeeCCccCccCCCccEEEEeeeeEEEE
Q 015254 36 DISQALRDAWKEACAATTPSKVLIPQGTYQLSPV-TMEGPCKAAIELQVKGTLKALTDPANVKDAGSWVSFNKIEHLTVS 114 (410)
Q Consensus 36 Ddt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~ 114 (410)
.||+|||+|+ ++|+..++++|+||+|+|+. | .|+ ++++|+++|++.+ ++..|. ++|+.+.+ +||+|+
T Consensus 6 ~dt~aiq~ai-~~c~~~~g~~v~vP~G~~~~--l~~l~----~~~~l~~~g~~~~--~~~~w~--g~~i~~~~-~nv~I~ 73 (339)
T 2iq7_A 6 TDAAAAIKGK-ASCTSIILNGIVVPAGTTLD--MTGLK----SGTTVTFQGKTTF--GYKEWE--GPLISFSG-TNININ 73 (339)
T ss_dssp SCHHHHHHHG-GGCSEEEEESCEECTTCCEE--ECSCC----TTCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEEE
T ss_pred CCHHHHHHHH-HHhhccCCCeEEECCCEEEE--eeccC----CCeEEEEeCcEEc--cccccc--CcEEEEEc-ccEEEE
Confidence 4799999998 56887667899999999874 3 445 7999999999876 346776 58999877 999999
Q ss_pred eC--eEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCC----
Q 015254 115 GG--GTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEE---- 188 (410)
Q Consensus 115 G~--G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~---- 188 (410)
|. |+|||+|+.||+..... ....||+ ++.+.+|+|++|++++++|+|.|++++..|+|++|++++|.++..
T Consensus 74 G~~gG~IdG~G~~~w~~~~~~-~~~~rp~--~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~ 150 (339)
T 2iq7_A 74 GASGHSIDCQGSRWWDSKGSN-GGKTKPK--FFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAG 150 (339)
T ss_dssp ECTTCEEECCGGGTCCSCGGG-SSSCCCC--CEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTT
T ss_pred cCCCCEEECCccccccccccc-CCCCCCe--EEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcccccc
Confidence 97 79999999999643222 2456899 999999999999999999999999999999999999999999743
Q ss_pred CCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCCe
Q 015254 189 SLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTSN 268 (410)
Q Consensus 189 ~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~ 268 (410)
++|+|||++.+|++|+|+||+|.++||||++++ .+||+|+||+|..+||++|||+|.+ ..+.++||+|+||+|.++.+
T Consensus 151 ~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~ 228 (339)
T 2iq7_A 151 GHNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDN 228 (339)
T ss_dssp CCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCc
Confidence 689999999999999999999999999999999 4999999999999999999998765 56899999999999999999
Q ss_pred eEEEEecCCCCCcceeeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecC-cceEEEecCC
Q 015254 269 GVRIKTWPASYPGTASDLHFEDIKMNNVSN-PILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSAT-AVAIKLACSG 346 (410)
Q Consensus 269 gi~iks~~g~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~-~~~~~i~~~~ 346 (410)
|++||+++++ +|.++||+|+||+++++.+ ||.|++.|++.. +...+.+.+.|+||+|+||+++... ..++.|.|+
T Consensus 229 girIkt~~g~-~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~- 305 (339)
T 2iq7_A 229 GVRIKTVSGA-TGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVPITGLTLSKITGSVASSGTNVYILCA- 305 (339)
T ss_dssp EEEEEEETTC-CCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-
T ss_pred EEEEEEeCCC-CeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeC-
Confidence 9999999876 5999999999999999986 999999997742 2223344679999999999999975 578999995
Q ss_pred CCceecEEEEeEEEEecCCCCCCceeeeeccc
Q 015254 347 GVPCEGVELADISLTYTGPEGPIKSECTNIQP 378 (410)
Q Consensus 347 ~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~ 378 (410)
..||+||+|+||+++... ....|+|+..
T Consensus 306 ~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 333 (339)
T 2iq7_A 306 SGACSNWKWSGVSVTGGK----KSTKCSNIPS 333 (339)
T ss_dssp TTCEEEEEEEEEEEESSB----CCSCCBCCCT
T ss_pred CCcEecEEEEeEEEEcCC----CcccccCCCC
Confidence 889999999999998532 3468999874
No 6
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.5e-55 Score=432.21 Aligned_cols=320 Identities=22% Similarity=0.396 Sum_probs=275.3
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEEcCceEEeeee-EecCCCCccEEEEEeeEEEeeCCccCccCCCccEEEEeeeeEEEEe
Q 015254 37 ISQALRDAWKEACAATTPSKVLIPQGTYQLSPV-TMEGPCKAAIELQVKGTLKALTDPANVKDAGSWVSFNKIEHLTVSG 115 (410)
Q Consensus 37 dt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G 115 (410)
||+|||+|+ ++|+..++++|+||+|+|+. | .|+ ++++|+++|++.+ +...|.. ++||.+.+ +||+|+|
T Consensus 7 ~t~aiq~ai-~~c~~~gg~~v~vP~G~~l~--l~~l~----~~~~l~~~g~~~~--~~~~w~~-g~~i~~~~-~ni~I~G 75 (349)
T 1hg8_A 7 EYSGLATAV-SSCKNIVLNGFQVPTGKQLD--LSSLQ----NDSTVTFKGTTTF--ATTADND-FNPIVISG-SNITITG 75 (349)
T ss_dssp SGGGHHHHH-HHCSEEEECCCEECTTCCEE--ETTCC----TTCEEEECSEEEE--CCCCCTT-CCSEEEEE-ESCEEEE
T ss_pred CHHHHHHHH-HhccccCCCEEEECCCEEEE--eeccC----CCeEEEEcCceec--ccccccC-CceEEEEC-ccEEEEe
Confidence 688999998 46877667899999999874 3 344 7999999999876 3467732 68999976 9999999
Q ss_pred --CeEecCCCCCCCcccccCCCCCCCCeeeeEEE-E-eeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCC-C--
Q 015254 116 --GGTFDGQGAVAPSECEKDDYCKKRPIVSNLSF-N-AITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPE-E-- 188 (410)
Q Consensus 116 --~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~-~-~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~-~-- 188 (410)
.|+|||+|+.||+..........||+ ++.+ . .++|++|++++++|+|.|++++..|+|++|++++|.+++ +
T Consensus 76 ~~~G~IdG~G~~ww~~~~~~~~~~~rP~--~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~ 153 (349)
T 1hg8_A 76 ASGHVIDGNGQAYWDGKGSNSNSNQKPD--HFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKP 153 (349)
T ss_dssp CTTCEEECCGGGTCCSCTTCTTSCCCCS--EEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSC
T ss_pred cCCCEEcCCcchhhhcccccCCCCCCCe--EEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccc
Confidence 69999999999974332222226899 8999 7 788999999999999999999999999999999999853 2
Q ss_pred ---------CCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCCCCCEEEEEEE
Q 015254 189 ---------SLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIRVR 259 (410)
Q Consensus 189 ---------~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~ 259 (410)
++|+|||++.+|++|+|+||++.++||||++++ ++||+|+||+|..+||++|||+|.+ ..+.++||+|+
T Consensus 154 ~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~ 231 (349)
T 1hg8_A 154 NAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQFL 231 (349)
T ss_dssp CTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEEE
T ss_pred cccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEEE
Confidence 489999999999999999999999999999999 5999999999999999999999866 56889999999
Q ss_pred ceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecC-c
Q 015254 260 ECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVS-NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSAT-A 337 (410)
Q Consensus 260 n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~-~ 337 (410)
||+|.++.+|++||+++++ +|.|+||+|+||+|+++. +||.|++.|++... .+.+.+.+.|+||+|+||+++... .
T Consensus 232 n~~~~~~~~GirIKt~~g~-~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~-~~~p~~~~~i~~I~~~ni~gt~~~~~ 309 (349)
T 1hg8_A 232 SSQVVNSQNGCRIKSNSGA-TGTINNVTYQNIALTNISTYGVDVQQDYLNGGP-TGKPTNGVKISNIKFIKVTGTVASSA 309 (349)
T ss_dssp EEEEEEEEEEEEEEEETTC-CEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSB-CSCCCSSEEEEEEEEEEEEEEECTTS
T ss_pred EEEEECCCcEEEEEecCCC-CccccceEEEEEEEEccccccEEEEeeccCCCC-CCcccCCceEEEEEEEeEEEEeCCCC
Confidence 9999999999999999976 599999999999999997 69999999987432 223345689999999999999876 5
Q ss_pred ceEEEecCCCCceecEEEEeEEEEecCCCCCCceeeeeccc
Q 015254 338 VAIKLACSGGVPCEGVELADISLTYTGPEGPIKSECTNIQP 378 (410)
Q Consensus 338 ~~~~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~ 378 (410)
.++.+.|+ +.||+||+|+||+++..+ ....|.|+..
T Consensus 310 ~~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 345 (349)
T 1hg8_A 310 QDWFILCG-DGSCSGFTFSGNAITGGG----KTSSCNYPTN 345 (349)
T ss_dssp EEEEEECC-SSCEEEEEEESCEEECCS----SCCEECSSSS
T ss_pred EEEEEEeC-CCcCcCEEEEeEEEEcCC----CCeeeeCCCC
Confidence 68999998 689999999999998643 3468999875
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=6.7e-56 Score=433.07 Aligned_cols=319 Identities=22% Similarity=0.418 Sum_probs=276.6
Q ss_pred chhHHHHHHHHHHHhhcCCCcEEEEcCceEEeeee-EecCCCCccEEEEEeeEEEeeCCccCccCCCccEEEEeeeeEEE
Q 015254 35 ADISQALRDAWKEACAATTPSKVLIPQGTYQLSPV-TMEGPCKAAIELQVKGTLKALTDPANVKDAGSWVSFNKIEHLTV 113 (410)
Q Consensus 35 tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~i~~~~~~nv~I 113 (410)
..||+|||+|+ ++|+..++++|+||+|+|+. | .|+ ++++|+++|++.+ ++..|. ++|+.+.+ +||+|
T Consensus 5 ~~~t~aiq~ai-~~c~~~gg~~v~vP~G~~~~--l~~l~----~~~~l~~~g~~~~--~~~~w~--g~li~~~~-~nv~I 72 (336)
T 1nhc_A 5 FTSASEASESI-SSCSDVVLSSIEVPAGETLD--LSDAA----DGSTITFEGTTSF--GYKEWK--GPLIRFGG-KDLTV 72 (336)
T ss_dssp ESSHHHHHHHG-GGCSEEEEESCEECTTCCEE--CTTCC----TTCEEEEESEEEE--CCCCSC--CCSEECCE-ESCEE
T ss_pred ECCHHHHHHHH-HHhhccCCCeEEECCCEEEE--eeccC----CCeEEEEeceEEc--cccccc--CcEEEEec-CCEEE
Confidence 35799999998 56887667899999999873 3 344 7999999999886 346676 58888865 99999
Q ss_pred EeC--eEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCC---
Q 015254 114 SGG--GTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEE--- 188 (410)
Q Consensus 114 ~G~--G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~--- 188 (410)
+|. |+|||+|+.||+..... ....||+ ++.+.+|+|++|++++++|+|.|++++. |+|++|++++|.++..
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~--~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~ 148 (336)
T 1nhc_A 73 TMADGAVIDGDGSRWWDSKGTN-GGKTKPK--FMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDN 148 (336)
T ss_dssp EECTTCEEECCGGGTCCSCTTT-SSSCCCC--CEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHH
T ss_pred EcCCCeEEECCccccccccCcC-CCCCCce--EEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccc
Confidence 997 79999999999643221 2456899 9999999999999999999999999999 9999999999999853
Q ss_pred -CCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCC
Q 015254 189 -SLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTS 267 (410)
Q Consensus 189 -~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~ 267 (410)
++|+||||+.+|++|+|+||+|.++||||+++++ +||+|+||+|..+||++|||+|.+ ..+.++||+|+||++.++.
T Consensus 149 ~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~ 226 (336)
T 1nhc_A 149 GGHNTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSA 226 (336)
T ss_dssp TCCSCCSEEECSCEEEEEESCEEESSSEEEEESSE-EEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCS
T ss_pred cCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCC-eEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCC
Confidence 6899999999999999999999999999999995 999999999999999999998765 5688999999999999999
Q ss_pred eeEEEEecCCCCCcceeeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecC-cceEEEecC
Q 015254 268 NGVRIKTWPASYPGTASDLHFEDIKMNNVSN-PILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSAT-AVAIKLACS 345 (410)
Q Consensus 268 ~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~-~~~~~i~~~ 345 (410)
+|++||+++++ +|.++||+|+||+++++.+ ||.|++.|++.. +.+.+.+.++|+||+|+||+++... ..++.+.|+
T Consensus 227 ~girIkt~~g~-~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~ 304 (336)
T 1nhc_A 227 NGVRIKTIYKE-TGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCG 304 (336)
T ss_dssp EEEEEEEETTC-CCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECC
T ss_pred cEEEEEEECCC-CCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcC
Confidence 99999999876 5999999999999999986 999999998742 2223344679999999999999976 578999995
Q ss_pred CCCceecEEEEeEEEEecCCCCCCceeeeeccc
Q 015254 346 GGVPCEGVELADISLTYTGPEGPIKSECTNIQP 378 (410)
Q Consensus 346 ~~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~ 378 (410)
..||+||+|+||+++... ....|+|+..
T Consensus 305 -~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 332 (336)
T 1nhc_A 305 -DGSCSDWTWSGVDLSGGK----TSDKCENVPS 332 (336)
T ss_dssp -TTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred -CCcEecEEEEeEEEEcCC----CCcccCCCCC
Confidence 889999999999998632 3468999874
No 8
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3.2e-55 Score=428.46 Aligned_cols=325 Identities=23% Similarity=0.420 Sum_probs=278.8
Q ss_pred eeeEeecCCCcCCchhHHHHHHHHHHHhhcCCCcEEEEcCceEEeeee-EecCCCCccEEEEEeeEEEeeCCccCccCCC
Q 015254 22 LDVDVTKHGAKQNADISQALRDAWKEACAATTPSKVLIPQGTYQLSPV-TMEGPCKAAIELQVKGTLKALTDPANVKDAG 100 (410)
Q Consensus 22 ~~~~v~d~Ga~gdtDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~ 100 (410)
.+|.|++. +-++|||+|+ ++|+..++++|+||+|+|+. | .|+ ++++|+++|++.+ ++..|. +
T Consensus 2 ~~C~~~~~------~g~~aiq~ai-~~c~~~gg~~v~vP~G~~l~--l~~l~----~~~~l~~~g~~~~--~~~~w~--g 64 (339)
T 1ia5_A 2 TTCTFSGS------NGASSASKSK-TSCSTIVLSNVAVPSGTTLD--LTKLN----DGTHVIFSGETTF--GYKEWS--G 64 (339)
T ss_dssp CEEEEEGG------GHHHHHHHHG-GGCSEEEEESCEECTTCCEE--ECSCC----TTCEEEEESEEEE--CCCCSC--C
T ss_pred CeEEECCC------cchHHHHHHH-HHhhccCCCeEEECCCEEEE--eeccC----CCeEEEEeCcEEc--cccccc--C
Confidence 45666642 2477999997 56887667899999999873 3 445 8999999999876 356776 6
Q ss_pred ccEEEEeeeeEEEEeC--eEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEE
Q 015254 101 SWVSFNKIEHLTVSGG--GTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTF 178 (410)
Q Consensus 101 ~~i~~~~~~nv~I~G~--G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i 178 (410)
+|+.+.+ +||+|+|. |+|||+|+.||+..... ....||+ ++.+.+|+|++|++++++|+|.|++++..|+|++|
T Consensus 65 ~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~--~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 65 PLISVSG-SDLTITGASGHSINGDGSRWWDGEGGN-GGKTKPK--FFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTL 140 (339)
T ss_dssp CSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTT-SSSCCCC--CEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEE
T ss_pred cEEEEEc-CcEEEEcCCCeEEeCCCCccccccccC-CCCCCCe--EEEEeecCcEEEEEEEEEcCCcceEEEecccCeEE
Confidence 8999877 99999997 79999999999643222 2456899 99999999999999999999999999999999999
Q ss_pred EeEEEECCCC----CCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCCCCCEE
Q 015254 179 QRVTVTAPEE----SLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQNEQPVV 254 (410)
Q Consensus 179 ~n~~i~~~~~----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~ 254 (410)
++++|.++.+ ++|+|||++.+|++|+|+||+|.++||||+++++ +||+|+||+|..+||++|||+|.+ ..+.++
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~ 218 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHGLSIGSVGGR-SDNTVK 218 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSSCEEEEEECSS-SCCEEE
T ss_pred eeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCC-eEEEEEeEEEECCceEEECcCCcc-cCCCEE
Confidence 9999999743 6899999999999999999999999999999994 999999999999999999998765 568899
Q ss_pred EEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEe
Q 015254 255 GIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSN-PILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGT 333 (410)
Q Consensus 255 nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~ 333 (410)
||+|+||+|.++.+|++||+++++ +|.++||+|+||+++++.. ||.|++.|.... +.+.+.+.|+||+|+||+++
T Consensus 219 nV~v~n~~~~~t~~girIKt~~g~-~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~---~~p~~~~~i~ni~~~ni~gt 294 (339)
T 1ia5_A 219 NVTFVDSTIINSDNGVRIKTNIDT-TGSVSDVTYKDITLTSIAKYGIVVQQNYGDTS---STPTTGVPITDFVLDNVHGS 294 (339)
T ss_dssp EEEEEEEEEESCSEEEEEEEETTC-CCEEEEEEEEEEEEEEESSEEEEEEEEETCTT---SCCCSSSCEEEEEEEEEEEE
T ss_pred EEEEEeeEEECCCcEEEEEEeCCC-CcEEEeeEEEEEEEECcccccEEEEccCCCCC---CCCcCCceEEEEEEEeEEEE
Confidence 999999999999999999999876 5999999999999999986 999999994321 12334679999999999999
Q ss_pred ecC-cceEEEecCCCCceecEEEEeEEEEecCCCCCCceeeeeccc
Q 015254 334 SAT-AVAIKLACSGGVPCEGVELADISLTYTGPEGPIKSECTNIQP 378 (410)
Q Consensus 334 ~~~-~~~~~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~ 378 (410)
... ..++.|.|+ ..||+||+|+||+++... ....|+|+..
T Consensus 295 ~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 335 (339)
T 1ia5_A 295 VVSSGTNILISCG-SGSCSDWTWTDVSVSGGK----TSSKCTNVPS 335 (339)
T ss_dssp ECTTSEEEEEECC-TTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred eCCCCEEEEEEeC-CCCEecEEEEeEEEECCC----CCeeeECCCC
Confidence 975 578999995 889999999999998532 3468999874
No 9
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=4.3e-55 Score=457.45 Aligned_cols=330 Identities=20% Similarity=0.294 Sum_probs=274.0
Q ss_pred cceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEeeeeEecCCCCccEEEEEe--eEEEeeCCccC
Q 015254 20 AALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQLSPVTMEGPCKAAIELQVK--GTLKALTDPAN 95 (410)
Q Consensus 20 ~~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~--G~i~~~~~~~~ 95 (410)
.+..++|++|||+|| +|||+|||+||+ +|+. |++|+||+|+|++++|.|+ |+++|+++ |+|+++.+..+
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G~y~~g~i~lk----s~v~L~l~~gatL~~s~d~~~ 225 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAGTYKSGALWLK----SDMTLNLQAGAILLGSENPDD 225 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSEEEEECCEECC----SSEEEEECTTEEEEECSCGGG
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCCceEecceecc----CceEEEecCCcEEEecCCHHH
Confidence 356899999999999 999999999995 6765 6899999999999999998 89999994 89999988877
Q ss_pred ccCC------------CccEEEEe--------eeeEEEEeCeEecCCCCCCCcccc--cC--------------------
Q 015254 96 VKDA------------GSWVSFNK--------IEHLTVSGGGTFDGQGAVAPSECE--KD-------------------- 133 (410)
Q Consensus 96 ~~~~------------~~~i~~~~--------~~nv~I~G~G~idG~g~~~~~~~~--~~-------------------- 133 (410)
|+.. .++|.+.+ ++||+|+|.|+|||+|+.||+... ..
T Consensus 226 y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~ 305 (608)
T 2uvf_A 226 YPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVHEDG 305 (608)
T ss_dssp SCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHHHHB
T ss_pred CcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccccccccc
Confidence 7520 25788877 799999999999999998874210 00
Q ss_pred --------------CC-----CCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCc
Q 015254 134 --------------DY-----CKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDG 194 (410)
Q Consensus 134 --------------~~-----~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DG 194 (410)
.. ...||. +|.|.+|+|++|+|+++++++.|++++..|+|++|+|++|.. .+++|+||
T Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~rP~--~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDG 382 (608)
T 2uvf_A 306 ILAKNQVEKAVSDGMDLKNAYGQRRSS--LMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDG 382 (608)
T ss_dssp SHHHHHHHHHHHTTCCHHHHHHHSSCC--SEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCS
T ss_pred cccccccccccccccccccccccCCCe--EEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCe
Confidence 00 114899 999999999999999999999999999999999999999865 45689999
Q ss_pred eEeeccccEEEEeeEEecCCceEEecCC----------ceeEEEEeEEEcCCceE-EEeecCccCCCCCEEEEEEEceEE
Q 015254 195 IHVGRSSGVTITDSKIGTGDDCISIGDG----------TQQMEINKIDCGPGHGI-SVGSLGKYQNEQPVVGIRVRECNI 263 (410)
Q Consensus 195 i~~~~s~nv~I~n~~i~~gdD~i~i~s~----------~~nv~I~n~~~~~~~Gi-~igs~g~~~~~~~v~nv~i~n~~~ 263 (410)
|++.+|++|+|+||+|.++||||+++++ ++||+|+||+|.++||+ .|||+ ..+.++||+|+||++
T Consensus 383 idi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~ 458 (608)
T 2uvf_A 383 IEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVM 458 (608)
T ss_dssp EEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEE
T ss_pred EEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEE
Confidence 9999999999999999999999999986 79999999999999984 58996 678999999999999
Q ss_pred ecCCeeEEEEecCCCCCcceeeEEEEeEEEecC-CccEEEEeeeCCCCCCCCC--CCCceeEEeEEEEeEEEeecCc--c
Q 015254 264 SNTSNGVRIKTWPASYPGTASDLHFEDIKMNNV-SNPILLDQVYCPHNQCNAK--VPSRVKLDRVSFKNIRGTSATA--V 338 (410)
Q Consensus 264 ~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~~~~~--~~~~~~i~nVtf~nI~~~~~~~--~ 338 (410)
.++.+|++||++.++ +|.|+||+|+||+|+++ .+||.|++.|++...+... ......++||+|+||+...... .
T Consensus 459 ~~t~~GirIKt~~g~-gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~ 537 (608)
T 2uvf_A 459 YLTDIGLRAKSTSTI-GGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNP 537 (608)
T ss_dssp ESCSEEEEEEEETTT-CCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSC
T ss_pred ECCCceEEEeeecCC-CceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEE
Confidence 999999999999877 59999999999999999 5899999999865321000 0112356666666666554321 2
Q ss_pred eEEE--ecCCCCceecEEEEeEEEEecC
Q 015254 339 AIKL--ACSGGVPCEGVELADISLTYTG 364 (410)
Q Consensus 339 ~~~i--~~~~~~~~~ni~~~nv~i~~~~ 364 (410)
++.+ .|.+..||+||+|+||+++...
T Consensus 538 ~i~i~g~~~~~~p~~ni~~~nv~i~~~~ 565 (608)
T 2uvf_A 538 SIEIKGDTANKAWHRLVHVNNVQLNNVT 565 (608)
T ss_dssp SEEEECBGGGTBCEEEEEEEEEEEESCC
T ss_pred eEEEEEEcCCCCccccEEEEeEEEEccC
Confidence 3444 4556678999999999998765
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=1.9e-55 Score=428.66 Aligned_cols=311 Identities=20% Similarity=0.325 Sum_probs=268.8
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEcCceEEeeeeEecCCCCccEEEEEeeEEEeeCCccCccCCCccEEEEeeeeEEEEe-C
Q 015254 38 SQALRDAWKEACAATTPSKVLIPQGTYQLSPVTMEGPCKAAIELQVKGTLKALTDPANVKDAGSWVSFNKIEHLTVSG-G 116 (410)
Q Consensus 38 t~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G-~ 116 (410)
++|||+ + +||+..++++|+||+|+|+ .|.|+ ++++|+++|++.+ ++..|. ++||.+.+ +||+|+| .
T Consensus 8 ~~aiq~-i-~aC~~~gg~~v~vP~G~~l--~l~l~----~~~~l~~~g~~~~--~~~~w~--~~~i~~~~-~ni~I~G~~ 74 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAVTLNGFTVPAGNTL--VLNPD----KGATVTMAGDITF--AKTTLD--GPLFTIDG-TGINFVGAD 74 (335)
T ss_dssp TTGGGG-C-TTCSEEEECCEEECTTCCE--EECCC----TTCEEEECSCEEE--CCCCSC--SCSEEEEE-EEEEEECTT
T ss_pred HHHhHH-H-HhcccCCCCEEEECCCEEE--EEEeC----CCeEEEEeccEec--cccccc--CcEEEEEc-cCEEEEeCc
Confidence 568999 6 6798777789999999987 35555 8999999999887 346787 58999975 9999999 5
Q ss_pred eEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeCeee-EEEEeEEEECCCC-----CC
Q 015254 117 GTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIGAKN-FTFQRVTVTAPEE-----SL 190 (410)
Q Consensus 117 G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~n-v~i~n~~i~~~~~-----~~ 190 (410)
|+|||+|+.||+..... ....||+ ++.+.+|+ ++|++++++|+|.|++++..|+| ++|+|++|.++.+ ++
T Consensus 75 G~idG~G~~ww~~~~~~-~~~~rP~--~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~ 150 (335)
T 1k5c_A 75 HIFDGNGALYWDGKGTN-NGTHKPH--PFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGH 150 (335)
T ss_dssp CEEECCGGGTCCSCTTT-SSSCCCC--CSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCC
T ss_pred cEEcCChhHhhhccccc-CCCCCCe--EEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCC
Confidence 99999999999643322 2457899 99999999 99999999999999999999999 9999999999743 78
Q ss_pred CCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCCeeE
Q 015254 191 NTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTSNGV 270 (410)
Q Consensus 191 n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi 270 (410)
|+||||+ +|+||+|+||++.++||||++|++ +||+|+||+|..+||++|||++. .+.|+||+|+||+|.++.+|+
T Consensus 151 NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gi 225 (335)
T 1k5c_A 151 NTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGV 225 (335)
T ss_dssp SCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEE
T ss_pred CCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceE
Confidence 9999999 999999999999999999999995 99999999999999999999952 589999999999999999999
Q ss_pred EEEecCCCCCcceeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEE--EeecC-cceEEEecCC
Q 015254 271 RIKTWPASYPGTASDLHFEDIKMNNVS-NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIR--GTSAT-AVAIKLACSG 346 (410)
Q Consensus 271 ~iks~~g~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~--~~~~~-~~~~~i~~~~ 346 (410)
+||+++++..|.|+||+|+||+++++. +||.|++.|.... +.+.+++.|+||+|+||+ ++... ..++.+.|++
T Consensus 226 rIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~---~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~ 302 (335)
T 1k5c_A 226 RIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPDDV---GNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN 302 (335)
T ss_dssp EEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSS---SSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSS
T ss_pred EEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCCCC---CCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCC
Confidence 999999762289999999999999997 6999999994322 123346799999999999 77765 5689999986
Q ss_pred CCceecEEEEeEEEEecCCCCCCceeeeeccc
Q 015254 347 GVPCEGVELADISLTYTGPEGPIKSECTNIQP 378 (410)
Q Consensus 347 ~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~ 378 (410)
||+||+|+||+++..+. ....|+++..
T Consensus 303 --~c~ni~~~nv~i~~~~~---~~~~~~~~~~ 329 (335)
T 1k5c_A 303 --CSGNWNWSQLTVTGGKA---GTIKSDKAKI 329 (335)
T ss_dssp --EESEEEEEEEEEESSBC---CCEECTTCEE
T ss_pred --cCCCEEEEeEEEEcCCC---CceEeEEeEe
Confidence 99999999999998653 3466666554
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=2.1e-47 Score=387.29 Aligned_cols=293 Identities=14% Similarity=0.084 Sum_probs=244.6
Q ss_pred ceeeEeecCCCcCCchhHHHHHHHHHHHhhcCCCcEEEEcCc-eEEe------------eeeEecCCCCccEEEEEeeEE
Q 015254 21 ALDVDVTKHGAKQNADISQALRDAWKEACAATTPSKVLIPQG-TYQL------------SPVTMEGPCKAAIELQVKGTL 87 (410)
Q Consensus 21 ~~~~~v~d~Ga~gdtDdt~aiq~Ai~~a~~~~~g~~v~~P~G-~Y~i------------~~l~l~~~~~s~v~l~~~G~i 87 (410)
..++||+||||+|| ||+|||+||+ +|.+.+|++|+||+| +|++ ++|.|+ |+++|+++|+|
T Consensus 49 ~~~~nV~dfGA~gD--dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk----SnVtL~LdGtL 121 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD--SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR----SNVNLNIEGRI 121 (600)
T ss_dssp CTTSCBCCCCTTCC--CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC----TTEEEEECSEE
T ss_pred CcEEeeecCCCCcc--CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEEc----CceEEeeecEE
Confidence 56899999999998 9999999996 577667899999999 9999 899998 99999999999
Q ss_pred EeeCCccCccCC-------CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEE
Q 015254 88 KALTDPANVKDA-------GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTS 160 (410)
Q Consensus 88 ~~~~~~~~~~~~-------~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i 160 (410)
+++.+..+|+.. ..+|.+.+++||+|+|.|+|||+|+.||+... ....||. +.+.+|+ |+|+++
T Consensus 122 ~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~---~~~~RP~---l~f~~c~---I~GITi 192 (600)
T 2x6w_A 122 HLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ---LRNGVAF---GRSYNCS---VTGITF 192 (600)
T ss_dssp EECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC---CEEEEEC---CSEEEEE---EESCEE
T ss_pred EEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc---cCCCCCE---EEEeeeE---EeCeEE
Confidence 999988888631 24478888999999999999999999995211 0112443 6788887 999999
Q ss_pred ecc-CcceEEE---eCeeeEEEEeEE----EECCCCCCCCCceEeeccccEEEEeeEEecCCceEEe-cCCce-eEEEEe
Q 015254 161 LNS-KQFHINV---IGAKNFTFQRVT----VTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCISI-GDGTQ-QMEINK 230 (410)
Q Consensus 161 ~ns-~~~~i~~---~~~~nv~i~n~~----i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i-~s~~~-nv~I~n 230 (410)
+|+ |.|++++ ..|+|++|+|++ |.+ ++|+||| |+|+||+|.++||||++ |++.. ++.++
T Consensus 193 ~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~e- 261 (600)
T 2x6w_A 193 QNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIACS- 261 (600)
T ss_dssp ESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEEE-
T ss_pred ECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEEE-
Confidence 999 9999999 999999999999 776 5899999 99999999999999999 99863 46777
Q ss_pred EEEcCCc-eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCccEEEEeeeCCC
Q 015254 231 IDCGPGH-GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSNPILLDQVYCPH 309 (410)
Q Consensus 231 ~~~~~~~-Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~ 309 (410)
+|..+| ||+|||+ ..+.|+||+|+| +||++.++ +|.|+||+|+||+++++.+++.+.+..
T Consensus 262 -~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G~-GG~V~NItfeNI~m~nV~~~I~i~q~~--- 322 (600)
T 2x6w_A 262 -VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAGA-GSYAYNMQVENNIAVIYGQFVILGSDV--- 322 (600)
T ss_dssp -EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTTT-CSEEEEEEEESCEEEESSEEEEEEECB---
T ss_pred -EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecCC-CceEEEEEEEEEEEEccceEEEeCCCC---
Confidence 677777 8999997 457889999988 66777665 599999999999999999888887641
Q ss_pred CCCCCCCCCceeEEeEEEEeEEEeecCcc------eEEEecCC-------CCceecEEEEeEEEEecC
Q 015254 310 NQCNAKVPSRVKLDRVSFKNIRGTSATAV------AIKLACSG-------GVPCEGVELADISLTYTG 364 (410)
Q Consensus 310 ~~~~~~~~~~~~i~nVtf~nI~~~~~~~~------~~~i~~~~-------~~~~~ni~~~nv~i~~~~ 364 (410)
...+...|+||+|+||+++..... +..+.+.+ ..++++|+|+|+++..++
T Consensus 323 -----~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 -----TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp -----CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred -----CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 123556999999999999986422 35565544 358999999999996543
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=4.5e-41 Score=345.80 Aligned_cols=277 Identities=14% Similarity=0.130 Sum_probs=218.1
Q ss_pred CCCcEEEEcCceEEe---eeeEecCCCCccEE-EEEe-eEEEeeCCccCccCCCccEEEEeeeeEEEEeCeEecCCCCCC
Q 015254 52 TTPSKVLIPQGTYQL---SPVTMEGPCKAAIE-LQVK-GTLKALTDPANVKDAGSWVSFNKIEHLTVSGGGTFDGQGAVA 126 (410)
Q Consensus 52 ~~g~~v~~P~G~Y~i---~~l~l~~~~~s~v~-l~~~-G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~g~~~ 126 (410)
.++++|+||+|+|++ ++|.|+ |+++ |+++ |.++. ++++...+++||+|+|.|+|||+|+.|
T Consensus 197 ~ggg~v~vP~G~yl~g~~G~i~l~----s~~~~L~l~~GA~L~----------gs~~~~~~~~nv~ItG~GtIDG~G~~w 262 (549)
T 1x0c_A 197 TSASTVVFNPGVYYFTGHDHMVLS----SSVTWVYFAPGAYVK----------GAVEFLSTASEVKASGHGVLSGEQYVW 262 (549)
T ss_dssp CCCSEEEECSEEEECCTTCCEEEC----TTCCEEEECTTEEEE----------SCEEECCCSSEEEEESSCEEECTTSCT
T ss_pred CCCCEEEECCeEEecCCceEEEec----CCCCeEecCCCCEEE----------EEEEEecCceeEEEEeeEEEECCCcee
Confidence 467899999999997 589999 8999 9998 65442 233333378999999999999999999
Q ss_pred CcccccCC--CCCCCCeeeeEEE------EeeccEEEEeEEEeccCcceEEEe-Ce-ee--EEEEeEEEECCCCCCCCCc
Q 015254 127 PSECEKDD--YCKKRPIVSNLSF------NAITNSVVQDVTSLNSKQFHINVI-GA-KN--FTFQRVTVTAPEESLNTDG 194 (410)
Q Consensus 127 ~~~~~~~~--~~~~~p~~w~i~~------~~~~nv~I~~i~i~ns~~~~i~~~-~~-~n--v~i~n~~i~~~~~~~n~DG 194 (410)
|....... ....||. .+.+ .+|+|++|+|++++|+|.|++++. .| ++ ++|+|+++.++. .+|+||
T Consensus 263 w~~~~~~~~~~~~~rp~--~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDG 339 (549)
T 1x0c_A 263 YADPDEGYQKASGANNN--GLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDG 339 (549)
T ss_dssp TEEGGGTTEECGGGCSC--CCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCC
T ss_pred cccCcccccccccCCCc--eEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCc
Confidence 94211110 1123666 6666 999999999999999999999966 55 69 999999999854 368999
Q ss_pred eEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcC--Cce-EEEeecCccCCCCCEEEEEEEceEEecCCe---
Q 015254 195 IHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGP--GHG-ISVGSLGKYQNEQPVVGIRVRECNISNTSN--- 268 (410)
Q Consensus 195 i~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~--~~G-i~igs~g~~~~~~~v~nv~i~n~~~~~~~~--- 268 (410)
|++. +||+|+||+|.++||||++++ +||+|+||+|+. +++ |+|||. .+.++||+|+||+|.++..
T Consensus 340 idi~--~nV~I~n~~i~~gDDcIaIks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~ 410 (549)
T 1x0c_A 340 LEMY--PGTILQDVFYHTDDDGLKMYY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANA 410 (549)
T ss_dssp CBCC--TTCEEEEEEEEESSCCEECCS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSG
T ss_pred cccc--CCEEEEeeEEeCCCCEEEECC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECcccccc
Confidence 9998 999999999999999999998 899999999975 456 999983 5889999999999999763
Q ss_pred ---eEEEEe---cC-C------CCCcceeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEee
Q 015254 269 ---GVRIKT---WP-A------SYPGTASDLHFEDIKMNNVS-NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTS 334 (410)
Q Consensus 269 ---gi~iks---~~-g------~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~ 334 (410)
|..|++ +. + ...|.|+||+|+||+++++. +++.+...+. .++.+|+||+|+||++..
T Consensus 411 ~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~ 481 (549)
T 1x0c_A 411 GNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIES 481 (549)
T ss_dssp GGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEE
T ss_pred ccceEEEecccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEc
Confidence 444776 20 2 22479999999999999987 6665544321 233479999999999776
Q ss_pred cC-----cceEEEecCC------CCceecEEEEeEEEEec
Q 015254 335 AT-----AVAIKLACSG------GVPCEGVELADISLTYT 363 (410)
Q Consensus 335 ~~-----~~~~~i~~~~------~~~~~ni~~~nv~i~~~ 363 (410)
.. ..+..+.+.+ ..+|+||+|+||++.++
T Consensus 482 ~~~~~~~~~~~~i~G~~~~~~~~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 482 FEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp ECCGGGTCSCEEECCCBBTTTCCBCCEEEEEEEEEEETTE
T ss_pred cccccccccceEEeCCCccccccceeeeeEEEEeEEEeCe
Confidence 54 2344555432 27899999999999654
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=2e-39 Score=333.31 Aligned_cols=269 Identities=12% Similarity=0.136 Sum_probs=215.3
Q ss_pred CCCcEEEEcCceEEe-------------eeeEecCCCCccEE-EEEe-eEEEeeCCccCccCCCccEEEEeeeeEEEEeC
Q 015254 52 TTPSKVLIPQGTYQL-------------SPVTMEGPCKAAIE-LQVK-GTLKALTDPANVKDAGSWVSFNKIEHLTVSGG 116 (410)
Q Consensus 52 ~~g~~v~~P~G~Y~i-------------~~l~l~~~~~s~v~-l~~~-G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G~ 116 (410)
.++++||||+|+|++ ++|.|+ |+++ |+++ |..+. .++.+.+++||+|+|.
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lk----Snvt~L~L~~GA~l~-----------g~i~~~~~~nv~ItG~ 293 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLN----SNTYWVYLAPGAYVK-----------GAIEYFTKQNFYATGH 293 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECC----TTCCEEEECTTEEEE-----------SCEEECCSSCEEEESS
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEec----CCCceEEecCCcEEE-----------ccEEEeCceeEEEEeC
Confidence 367899999999998 579998 8999 9998 65442 3578888999999999
Q ss_pred eEecCCCCCCCcccccC-CCCCCCCeeeeEEEE------eeccEEEEeEEEeccCcceEEEeCeeeE--EEEeEEEECCC
Q 015254 117 GTFDGQGAVAPSECEKD-DYCKKRPIVSNLSFN------AITNSVVQDVTSLNSKQFHINVIGAKNF--TFQRVTVTAPE 187 (410)
Q Consensus 117 G~idG~g~~~~~~~~~~-~~~~~~p~~w~i~~~------~~~nv~I~~i~i~ns~~~~i~~~~~~nv--~i~n~~i~~~~ 187 (410)
|+|||+|+.||...... .....||. .+.+. +|+|++|+|++++|+|.|++++..|+|+ +|+|+++.++.
T Consensus 294 GtIDG~G~~ww~~~~~~~~~~~~rp~--~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 294 GILSGENYVYQANAGDNYIAVKSDST--SLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp CEEECTTSCTTCBTTTTTBSCCCTTT--BCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred EEEeCCCcccccccccccccccCCcc--eEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 99999999999532211 11224676 77776 9999999999999999999999999999 99999998743
Q ss_pred CCCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcC--Cce-EEEeecCccCCCCCEEEEEEEceEEe
Q 015254 188 ESLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGP--GHG-ISVGSLGKYQNEQPVVGIRVRECNIS 264 (410)
Q Consensus 188 ~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~--~~G-i~igs~g~~~~~~~v~nv~i~n~~~~ 264 (410)
..++||||+. +||+|+||+|.++||||++++ +||+|+||+|.. ++| ++|||. .+.++||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEE
Confidence 2469999998 999999999999999999998 899999999875 456 999983 589999999999998
Q ss_pred cCCee--------EEEEecC--------CCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEE
Q 015254 265 NTSNG--------VRIKTWP--------ASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFK 328 (410)
Q Consensus 265 ~~~~g--------i~iks~~--------g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~ 328 (410)
++..+ ..+++.. ....+ | ||+|+||+++++.+++ +.. + +...|+||+|+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i-~-----------p~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI-T-----------PLQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE-C-----------CSEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE-C-----------CCCCEEEEEEE
Confidence 87642 2222110 00124 8 9999999999999885 433 1 23479999999
Q ss_pred eEEEee------cCcceEEEecCCCCceecEEEEeEEEEec
Q 015254 329 NIRGTS------ATAVAIKLACSGGVPCEGVELADISLTYT 363 (410)
Q Consensus 329 nI~~~~------~~~~~~~i~~~~~~~~~ni~~~nv~i~~~ 363 (410)
||+++. ....+..+.+.+ .+|+||+|+||++...
T Consensus 507 NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 507 NVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp EEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred eEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 999775 222344566656 8999999999999544
No 14
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=5.6e-37 Score=312.60 Aligned_cols=269 Identities=16% Similarity=0.173 Sum_probs=206.0
Q ss_pred ccceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEe-eeeEecCCCCccEEEEEee----EEEeeC
Q 015254 19 AAALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQL-SPVTMEGPCKAAIELQVKG----TLKALT 91 (410)
Q Consensus 19 ~~~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i-~~l~l~~~~~s~v~l~~~G----~i~~~~ 91 (410)
..+..+||+||||+|| +|||+|||+||++ + ++|+||+|+|++ ++|.|+ ++++|++++ +|+++.
T Consensus 18 ~~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----G-g~V~iP~GtYlis~~l~l~----snv~L~g~g~~~t~L~~~~ 87 (609)
T 3gq8_A 18 LKQFGVSVKTYGAKGDGVTDDIRAFEKAIES-----G-FPVYVPYGTFMVSRGIKLP----SNTVLTGAGKRNAVIRFMD 87 (609)
T ss_dssp HCSSSEEGGGGTCCCEEEEECHHHHHHHHHT-----S-SCEEECSEEEEESSCEEEC----SSEEEEESCTTTEEEEECT
T ss_pred cCCcEEEeEecccCCCCCchhHHHHHHHHHc-----C-CEEEECCccEEEeCceEEC----CCcEEEEeeCCCCEEEeCC
Confidence 4577999999999999 9999999999964 2 799999999999 799998 899999985 567665
Q ss_pred CccCccCC-CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEE
Q 015254 92 DPANVKDA-GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINV 170 (410)
Q Consensus 92 ~~~~~~~~-~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~ 170 (410)
+...|..- .+++.+.+.+||+|+|. +|||+|+.||...+ .....||. +|.|..|+|++|++++++|+|.+++.+
T Consensus 88 ~~p~~~~li~~lI~a~~~~NItItG~-TIDGNG~~~g~~~~--~~g~~RP~--lI~f~~c~NV~I~gVti~NSp~~gI~I 162 (609)
T 3gq8_A 88 SVGRGESLMYNENVTTGNENIFLSSF-TLDGNNKRLGQGIS--GIGGSRES--NLSIRACHNVYIRDIEAVDCTLHGIDI 162 (609)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCC--CSSTTTTC--SEEEESCEEEEEEEEEEESCSSCSEEE
T ss_pred CCCCCCceeeeeeeecccccEEEEee-EEECCccccCcccc--cCCCCCcc--EEEEEeeceEEEEeeEEEeCCCCCeEE
Confidence 54333210 12345667899999995 99999985543221 22346899 999999999999999999999866654
Q ss_pred eCeeeEEEEeEEEECCCCCCCCCceEeec------cccEEEEeeEEe-cCCceEEecCCceeEEEEeEEEcC------Cc
Q 015254 171 IGAKNFTFQRVTVTAPEESLNTDGIHVGR------SSGVTITDSKIG-TGDDCISIGDGTQQMEINKIDCGP------GH 237 (410)
Q Consensus 171 ~~~~nv~i~n~~i~~~~~~~n~DGi~~~~------s~nv~I~n~~i~-~gdD~i~i~s~~~nv~I~n~~~~~------~~ 237 (410)
..+. . | ||+++.+ |+||+|+||+++ ++||||++++ ++||+|+||+|.+ ++
T Consensus 163 ~~~~-------------~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~ 225 (609)
T 3gq8_A 163 TCGG-------------L--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCN 225 (609)
T ss_dssp ECSS-------------S--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCC
T ss_pred eCCC-------------C--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcc
Confidence 4433 2 2 5555555 999999999995 5999999987 8999999999943 46
Q ss_pred eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeE-EEecCC-ccEEEEeeeCCCCCCCCC
Q 015254 238 GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDI-KMNNVS-NPILLDQVYCPHNQCNAK 315 (410)
Q Consensus 238 Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni-~~~~~~-~~i~i~~~~~~~~~~~~~ 315 (410)
|++||+. .+||+|+||++.++..|++||++.. ++.++||+++|. .++++. +.+....++.. .
T Consensus 226 GIsIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~~--~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a------~ 289 (609)
T 3gq8_A 226 GFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHGD--APAAYNISINGHMSVEDVRSYNFRHIGHHAA------T 289 (609)
T ss_dssp SEEECTT--------CEEEEEESEEEESSSEEEEEEECTT--SCCCEEEEEEEEEEESCSEEEEEEETTSCST------T
T ss_pred cEEccCC--------cccEEEEeeEEECCCCEEEEEecCC--CCccccEEEECCEeecCceEecceEEccccC------C
Confidence 8999742 2999999999999999999999864 378999999994 555544 35554443321 1
Q ss_pred CCCceeEEeEEEEeEEEeec
Q 015254 316 VPSRVKLDRVSFKNIRGTSA 335 (410)
Q Consensus 316 ~~~~~~i~nVtf~nI~~~~~ 335 (410)
.+...+..||+++|++....
T Consensus 290 dp~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 290 APQSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp SCCCSSCEEEEEEEEEEESC
T ss_pred CCCcceecceEeecceEEee
Confidence 12233567888888876554
No 15
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=1.1e-36 Score=314.81 Aligned_cols=269 Identities=17% Similarity=0.183 Sum_probs=204.1
Q ss_pred ccceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEe-eeeEecCCCCccEEEEEee----EEEeeC
Q 015254 19 AAALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQL-SPVTMEGPCKAAIELQVKG----TLKALT 91 (410)
Q Consensus 19 ~~~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i-~~l~l~~~~~s~v~l~~~G----~i~~~~ 91 (410)
..+..+||+||||+|| +|||+|||+||++ + ++|+||+|+|++ ++|.|+ ++++|++++ +|+++.
T Consensus 18 ~~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-----G-g~V~IPaGtYlisg~I~L~----snv~L~Geg~~~t~Lk~~~ 87 (772)
T 3gqn_A 18 LKQFGVSVKTYGAKGDGVTDDIRAFEKAIES-----G-FPVYVPYGTFMVSRGIKLP----SNTVLTGAGKRNAVIRFMD 87 (772)
T ss_dssp HCSSSEESGGGTCCCEEEEECHHHHHHHHHT-----T-SCEEECSEEEEESSCEEEC----SSCEEEEEEEEEEEEEECT
T ss_pred cCCcEEEeEecccCCCCChhHHHHHHHHHHc-----C-CEEEECCccEEEEeEEEEC----CCcEEEEecCCCCEEEeCC
Confidence 3577999999999999 9999999999964 3 799999999999 799999 899999986 466655
Q ss_pred CccCccCC-CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEE
Q 015254 92 DPANVKDA-GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINV 170 (410)
Q Consensus 92 ~~~~~~~~-~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~ 170 (410)
+...|..- .+++.+.+++||+|+|. +|||+|+.||+..+ .....||. +|.|.+|+|++|++++++|+|.+++.+
T Consensus 88 d~p~~~~li~~lI~a~gveNItItG~-TIDGNG~~~g~~~~--~~g~~RP~--lI~f~~ckNV~I~gVti~NSp~~gI~I 162 (772)
T 3gqn_A 88 SVGRGESLMYNENVTTGNENIFLSSF-TLDGNNKRLGQGIS--GIGGSRES--NLSIRACHNVYIRDIEAVDCTLHGIDI 162 (772)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCC--CSSTTTTC--SEEEESCEEEEEEEEEEESCSSCSEEE
T ss_pred CCCCCCceeeeeeeccCceeEEEEee-EEeCCccccCcccc--cCCCCCcc--EEEEEeeceEEEEeEEEEeCCCCCEEE
Confidence 54333210 13445678899999995 99999995443221 22346898 999999999999999999999865554
Q ss_pred eCeeeEEEEeEEEECCCCCCCCCceEeec------cccEEEEeeEEe-cCCceEEecCCceeEEEEeEEEcC------Cc
Q 015254 171 IGAKNFTFQRVTVTAPEESLNTDGIHVGR------SSGVTITDSKIG-TGDDCISIGDGTQQMEINKIDCGP------GH 237 (410)
Q Consensus 171 ~~~~nv~i~n~~i~~~~~~~n~DGi~~~~------s~nv~I~n~~i~-~gdD~i~i~s~~~nv~I~n~~~~~------~~ 237 (410)
.++.. | ||+++.+ |+||+|+||+|+ ++||||++++ ++||+|+||+|.+ ++
T Consensus 163 -------------~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~ 225 (772)
T 3gqn_A 163 -------------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCN 225 (772)
T ss_dssp -------------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCC
T ss_pred -------------eCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcc
Confidence 43332 2 5555555 999999999995 5999999987 8999999999943 46
Q ss_pred eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEe-EEEecCC-ccEEEEeeeCCCCCCCCC
Q 015254 238 GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFED-IKMNNVS-NPILLDQVYCPHNQCNAK 315 (410)
Q Consensus 238 Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~n-i~~~~~~-~~i~i~~~~~~~~~~~~~ 315 (410)
|++||+. .+||+|+||++.++..|++||++.. ++.++||++.+ +.+++.. +.+....++.. .
T Consensus 226 GIsIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~~~--gg~v~NV~I~gnis~~dvrsynir~iG~h~a------~ 289 (772)
T 3gqn_A 226 GFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHGD--APAAYNISINGHMSVEDVRSYNFRHIGHHAA------T 289 (772)
T ss_dssp SEEECTT--------CEEEEEEEEEEESSSEEEEECCCTT--SCCCEEEEEEEEEEESCSEEEEECCTTSCSS------S
T ss_pred cEEecCC--------cccEEEEceEEECCCcEEEEEEeCC--CCccccEEEECCEEeccCeEecceEEccccC------C
Confidence 8999742 2999999999999999999998764 37899999985 7776653 34443332211 1
Q ss_pred CCCceeEEeEEEEeEEEeec
Q 015254 316 VPSRVKLDRVSFKNIRGTSA 335 (410)
Q Consensus 316 ~~~~~~i~nVtf~nI~~~~~ 335 (410)
.+...+..||+++|++....
T Consensus 290 dp~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 290 APQSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp SCCCSSCEEEEEEEEEEESC
T ss_pred CCCCccCccEEeecceEEcc
Confidence 12223667888888776554
No 16
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=2.1e-36 Score=304.32 Aligned_cols=295 Identities=17% Similarity=0.199 Sum_probs=218.6
Q ss_pred cceeeE-eecCCCcCC--chhHHHHHHHHHHHhhcC-CCcEEEEcCceEEeeeeEecCCCCccEEEEEe--eEEEeeCC-
Q 015254 20 AALDVD-VTKHGAKQN--ADISQALRDAWKEACAAT-TPSKVLIPQGTYQLSPVTMEGPCKAAIELQVK--GTLKALTD- 92 (410)
Q Consensus 20 ~~~~~~-v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~-~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~--G~i~~~~~- 92 (410)
.+..++ |++|||+|| +|||+|||+||+ +|++. ++++|+||+|+|++++|.|+ ++++|+++ ++|+++.+
T Consensus 18 ~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aid-ac~~~~ggg~V~vP~GtYl~g~I~lk----s~v~L~l~~GatL~~s~~t 92 (464)
T 1h80_A 18 QDVNYDLVDDFGANGNDTSDDSNALQRAIN-AISRKPNGGTLLIPNGTYHFLGIQMK----SNVHIRVESDVIIKPTWNG 92 (464)
T ss_dssp CSEEEEHHHHHCCCTTSSSBCHHHHHHHHH-HHHTSTTCEEEEECSSEEEECSEECC----TTEEEEECTTCEEEECCCT
T ss_pred CcceeeehhccCcCCCCCchhHHHHHHHHH-HHhhccCCcEEEECCCeEEEeeEecc----CceEEEEcCCcEEEeccCC
Confidence 356788 999999999 999999999995 56554 67999999999999999998 89999998 57777653
Q ss_pred -ccCccCCCccEEE---EeeeeEEEEeCe---EecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCc
Q 015254 93 -PANVKDAGSWVSF---NKIEHLTVSGGG---TFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQ 165 (410)
Q Consensus 93 -~~~~~~~~~~i~~---~~~~nv~I~G~G---~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~ 165 (410)
...| +++.+ .+++|++|+|.| +|||+|+. ..+|. ++.+.+|+|++|++++++|+
T Consensus 93 d~~~y----~~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~-----------~~rp~--~i~~~~~~Nv~I~gIti~n~-- 153 (464)
T 1h80_A 93 DGKNH----RLFEVGVNNIVRNFSFQGLGNGFLVDFKDSR-----------DKNLA--VFKLGDVRNYKISNFTIDDN-- 153 (464)
T ss_dssp TCSCE----EEEEESSSSCEEEEEEEECTTCEEEECTTCS-----------CCBEE--EEEECSEEEEEEEEEEEECC--
T ss_pred CcccC----CceEeecccCccceEEECcCcceEEeCCCCC-----------CCCce--EEEEEeeccEEEeeeEEecc--
Confidence 4444 23433 578999999998 99988763 23677 89999999999999999994
Q ss_pred ceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEE--ecCCceeEEEEeEEEcCCceEEEee
Q 015254 166 FHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCIS--IGDGTQQMEINKIDCGPGHGISVGS 243 (410)
Q Consensus 166 ~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~--i~s~~~nv~I~n~~~~~~~Gi~igs 243 (410)
|.+ ..+.++.+ .|+||+++ .|++|+|+||.|.++||++. ...+++||+|+||+|.+++|+.|++
T Consensus 154 w~i--h~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIkt 219 (464)
T 1h80_A 154 KTI--FASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMET 219 (464)
T ss_dssp SCB--SCSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEEC
T ss_pred ceE--eeceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEe
Confidence 443 24433322 26899998 78999999999999999875 2345899999999999988999976
Q ss_pred cC----ccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCc
Q 015254 244 LG----KYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSR 319 (410)
Q Consensus 244 ~g----~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~ 319 (410)
.+ .. ..+.++||+|+||+|.+...++.|++. .+.++||+|+||+++++..++.+.+.|++.-. ..+
T Consensus 220 g~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~----~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd-----~~~ 289 (464)
T 1h80_A 220 DNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPH----FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFS-----PTD 289 (464)
T ss_dssp CCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECT----TCBCCCEEEEEEEEESSSCSEEECCCCCEECC--------
T ss_pred CCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCC----CceEeEEEEEEEEEEccceeEEEecCcccccC-----ccc
Confidence 31 11 457899999999999999999999843 25789999999999999999999998875421 122
Q ss_pred eeEEeEEEEeEE------Eeec---------CcceEEEecC-------------CCCceecEEEEeEEEEe
Q 015254 320 VKLDRVSFKNIR------GTSA---------TAVAIKLACS-------------GGVPCEGVELADISLTY 362 (410)
Q Consensus 320 ~~i~nVtf~nI~------~~~~---------~~~~~~i~~~-------------~~~~~~ni~~~nv~i~~ 362 (410)
..+.+.+|+|.. ++.. ...++.+.|. +....+++.++||++..
T Consensus 290 ~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 290 EVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp ------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred cccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEecc
Confidence 256677777665 2220 0235556554 34456677777777765
No 17
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=2.4e-28 Score=242.43 Aligned_cols=217 Identities=17% Similarity=0.166 Sum_probs=146.3
Q ss_pred eeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEee--------eeEecCCCCccEEEEEee---E-EE
Q 015254 23 DVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQLS--------PVTMEGPCKAAIELQVKG---T-LK 88 (410)
Q Consensus 23 ~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~--------~l~l~~~~~s~v~l~~~G---~-i~ 88 (410)
.++|++|||+|| +|||+|||+||++|++. ++++|+||||+|++. +|.|+ ++++|+++| + |+
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~-gg~~v~~p~G~y~~~~~~~~~~g~l~~~----~~v~l~g~g~~~t~l~ 76 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA-GGGTVYLPAGEYRVSAAGEPGDGCLMLK----DGVYLAGAGMGETVIK 76 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT-TSEEEEECSEEEEECCCSSGGGCSEECC----TTEEEEESSBTTEEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc-CCCEEEECCeEEEEcccccCCcccEEec----CCeEEEEcCCCCcEEE
Confidence 589999999999 99999999999877665 578999999999984 79998 999999985 4 45
Q ss_pred eeCCccCccC------CCccEEEEeeeeEEEEeC-----eEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEe
Q 015254 89 ALTDPANVKD------AGSWVSFNKIEHLTVSGG-----GTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQD 157 (410)
Q Consensus 89 ~~~~~~~~~~------~~~~i~~~~~~nv~I~G~-----G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~ 157 (410)
+..+...++. .+.-....++++++|.|. |++|| ||.... |. .+..|++++|++
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~--------~~----~~~~~~nv~I~~ 140 (377)
T 2pyg_A 77 LIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYI--------PG----GDGADRDVTIER 140 (377)
T ss_dssp ECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSC--------TT----SSCCEEEEEEEE
T ss_pred ecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccC--------cc----ccccccceEEEe
Confidence 5444332210 011113446799999997 78887 774211 11 123689999999
Q ss_pred EEEeccCcceEEEeCee-eEEEEeEEEECCCCCCCCCceEeeccccEEEEee-EEecCCceEEecCCceeEEEEeEEEcC
Q 015254 158 VTSLNSKQFHINVIGAK-NFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDS-KIGTGDDCISIGDGTQQMEINKIDCGP 235 (410)
Q Consensus 158 i~i~ns~~~~i~~~~~~-nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~-~i~~gdD~i~i~s~~~nv~I~n~~~~~ 235 (410)
+++++++.+++++..|. ++.++|+.+.. ...|||.+..|++++|+++ .+...+|+|.+..++++++|+|+++..
T Consensus 141 ~~i~n~~~~gi~~~~~~~~~~i~n~~~~~----~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~ 216 (377)
T 2pyg_A 141 VEVREMSGYGFDPHEQTINLTIRDSVAHD----NGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG 216 (377)
T ss_dssp EEEECCSSCSEEECSSEEEEEEESCEEES----CSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES
T ss_pred EEEEecccceEEeecccCCeEEEeEEeec----CCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC
Confidence 99999999999998765 78888888765 3556666666666666666 344556666665555666666666654
Q ss_pred C-ceEEEeecCccCCCCCEEEEEEEceEEec
Q 015254 236 G-HGISVGSLGKYQNEQPVVGIRVRECNISN 265 (410)
Q Consensus 236 ~-~Gi~igs~g~~~~~~~v~nv~i~n~~~~~ 265 (410)
. .|+.+-..+.. .....++++|+++.+.+
T Consensus 217 ~~~g~~~~~~g~~-~~~~s~nv~i~~N~~~~ 246 (377)
T 2pyg_A 217 NGSSGLVVQRGLE-DLALPSNILIDGGAYYD 246 (377)
T ss_dssp CSSCSEEEECCSS-CCCCCEEEEEESCEEES
T ss_pred ccCceEEEecccc-CCCCCccEEEECCEEEc
Confidence 3 24333111100 12334455555555444
No 18
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.96 E-value=6.2e-30 Score=246.99 Aligned_cols=231 Identities=14% Similarity=0.195 Sum_probs=173.3
Q ss_pred ceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCc----eEEee-eeEecCCCCccEEEEEee--EEEeeC
Q 015254 21 ALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQG----TYQLS-PVTMEGPCKAAIELQVKG--TLKALT 91 (410)
Q Consensus 21 ~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G----~Y~i~-~l~l~~~~~s~v~l~~~G--~i~~~~ 91 (410)
+..+||+||||+|| +|||+|||+||++||+..+|++||||+| +|+++ +|.|+ ++++|++++ .+..+.
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~Lk----SnV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLIP----GGVNIRGVGKASQLRAK 124 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEEC----TTEEEECCSTTSEEEEC
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEec----CCeEEEEecCceEeecc
Confidence 46899999999999 9999999999998888767899999999 89985 89998 899999873 343321
Q ss_pred Cc-------cCccCCCccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEE--ec
Q 015254 92 DP-------ANVKDAGSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTS--LN 162 (410)
Q Consensus 92 ~~-------~~~~~~~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i--~n 162 (410)
.. ..| .+++.+.+++|+.|+|.|+|||++..|... .....++. .+ .++++.+++++. .+
T Consensus 125 ~~I~GtIia~~y---~s~I~~~~VeNIaITG~GTIDG~g~n~t~e----~~~~Rq~~--~~---~fdnV~Vn~Vt~~v~~ 192 (514)
T 2vbk_A 125 SGLTGSVLRLSY---DSDTIGRYLRNIRVTGNNTCNGIDTNITAE----DSVIRQVY--GW---VFDNVMVNEVETAYLM 192 (514)
T ss_dssp TTCCSEEEEECC---CSCCSCEEEESCEEECCSSSEEEEESCCTT----CSSCCCEE--SE---EEESCEEEEEEEEEEE
T ss_pred ccccccEEeccC---CccccccCceEEEEECCCeEeCCCCCcccc----ceeeeccc--eE---EeeeEEEEeEEEeEec
Confidence 11 113 356778889999999999999987655311 01112233 22 367999999965 46
Q ss_pred cCcceEEEeCeeeEEEE-eEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEEecCC-----------ceeEEEEe
Q 015254 163 SKQFHINVIGAKNFTFQ-RVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDG-----------TQQMEINK 230 (410)
Q Consensus 163 s~~~~i~~~~~~nv~i~-n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~-----------~~nv~I~n 230 (410)
++.|.+++..|++++++ ++++.. +|+||+|.+|+|..|||||++|+| ++|+.
T Consensus 193 Sg~WTIhPi~Cqnvt~r~gL~f~e-------------SCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~--- 256 (514)
T 2vbk_A 193 QGLWHSKFIACQAGTCRVGLHFLG-------------QCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR--- 256 (514)
T ss_dssp ESEEEEEEESCEEEEEEEEEEEES-------------CCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---
T ss_pred cCcEEEeEeccCceecccCccccC-------------CCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---
Confidence 88999999999999988 666642 799999999999999999999995 45555
Q ss_pred EEEcCCce-EEEeecCccCCCCCEEE-EEEEceEEecCCeeEEEEecCCCCCcce----eeEEEEeEEEe
Q 015254 231 IDCGPGHG-ISVGSLGKYQNEQPVVG-IRVRECNISNTSNGVRIKTWPASYPGTA----SDLHFEDIKMN 294 (410)
Q Consensus 231 ~~~~~~~G-i~igs~g~~~~~~~v~n-v~i~n~~~~~~~~gi~iks~~g~~~g~v----~nI~~~ni~~~ 294 (410)
|| +.|||+. +.++++| |++++|-+.+++ -+.+.. .|+.+-.+ ....|+|-.+.
T Consensus 257 ------hgav~igSE~---m~~Gvk~~v~v~~Clf~~td-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 315 (514)
T 2vbk_A 257 ------SEAIILDSET---MCIGFKNAVYVHDCLDLHME-QLDLDY-CGSTGVVIENVNGGFSFSNSWIA 315 (514)
T ss_dssp ------CEEEEEESSE---EEESCSEEEEESCCEEEEEE-SEEEEE-ESSEEEEESCCEEEEEEEEEEEE
T ss_pred ------cccEEECchh---hcccccccEEEEeeeccCCc-cccccc-cCCcceEEEeccCceeeccceEE
Confidence 65 9999984 4678999 999999999876 344322 22211112 34567776664
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.94 E-value=6.3e-25 Score=221.05 Aligned_cols=230 Identities=12% Similarity=0.170 Sum_probs=182.1
Q ss_pred CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEecc--CcceEEEeCeeeEE
Q 015254 100 GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNS--KQFHINVIGAKNFT 177 (410)
Q Consensus 100 ~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns--~~~~i~~~~~~nv~ 177 (410)
..+|.+.+++|++|+|--+.+ .|. |.+.+..|+|++|+++++.++ ..+++++..|+||+
T Consensus 190 P~~i~~~~~~nv~i~giti~n------------------sp~-~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~ 250 (448)
T 3jur_A 190 PSFVQFYRCRNVLVEGVKIIN------------------SPM-WCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 250 (448)
T ss_dssp CCSEEEESCEEEEEESCEEES------------------CSS-CSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEE
T ss_pred ceEEEEEcccceEEEeeEEEe------------------CCC-ceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEE
Confidence 357999999999999953332 344 689999999999999999884 45789999999999
Q ss_pred EEeEEEECCCC------CCCCCceEeec-cccEEEEeeEE--ecCCceEEecCC----ceeEEEEeEEEcCC-ceEEEee
Q 015254 178 FQRVTVTAPEE------SLNTDGIHVGR-SSGVTITDSKI--GTGDDCISIGDG----TQQMEINKIDCGPG-HGISVGS 243 (410)
Q Consensus 178 i~n~~i~~~~~------~~n~DGi~~~~-s~nv~I~n~~i--~~gdD~i~i~s~----~~nv~I~n~~~~~~-~Gi~igs 243 (410)
|+|++|.+.+| +.+.||+++.. |+||+|+||.+ ..+++||++++. .+||+|+||++.+. +|+.|++
T Consensus 251 I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt 330 (448)
T 3jur_A 251 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKT 330 (448)
T ss_dssp EESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEEC
T ss_pred EEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEE
Confidence 99999998543 12234443332 89999999999 556679999874 59999999999876 6999998
Q ss_pred cCccCCCCCEEEEEEEceEEecCCeeE-EEEecCC----CCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCC
Q 015254 244 LGKYQNEQPVVGIRVRECNISNTSNGV-RIKTWPA----SYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPS 318 (410)
Q Consensus 244 ~g~~~~~~~v~nv~i~n~~~~~~~~gi-~iks~~g----~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~ 318 (410)
... ..+.++||+|+|++|.+..+++ .|...+. ...+.++||+|+||+.++...++.|... +
T Consensus 331 ~~g--~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~ 396 (448)
T 3jur_A 331 NSR--RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------E 396 (448)
T ss_dssp CTT--TCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------T
T ss_pred EcC--CCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------C
Confidence 633 3588999999999999998887 8877542 1246899999999999997778888531 2
Q ss_pred ceeEEeEEEEeEEEeecCcceEEEec----CCCCceecEEEEeEEEEec
Q 015254 319 RVKLDRVSFKNIRGTSATAVAIKLAC----SGGVPCEGVELADISLTYT 363 (410)
Q Consensus 319 ~~~i~nVtf~nI~~~~~~~~~~~i~~----~~~~~~~ni~~~nv~i~~~ 363 (410)
..+++||+|+||+++... .+..+.. .+...++|++|+||++.++
T Consensus 397 ~~p~~~I~~~nv~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 397 NDYVKDILISDTIIEGAK-ISVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp TBCEEEEEEEEEEEESCS-EEEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEeeEEEEEEEEEccc-cceeEeccccccccceecccEEEEEEEcCE
Confidence 348999999999999764 3344432 3445699999999999864
No 20
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.91 E-value=1.9e-22 Score=210.85 Aligned_cols=246 Identities=11% Similarity=0.090 Sum_probs=196.7
Q ss_pred CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEec--cC-cceEEEeCeeeE
Q 015254 100 GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLN--SK-QFHINVIGAKNF 176 (410)
Q Consensus 100 ~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~n--s~-~~~i~~~~~~nv 176 (410)
..+|.+.+++||+|+|--+.+ .|. |.+.+.+|+|++|+++++.. ++ .++|++..|+||
T Consensus 331 P~~i~~~~~~nv~I~giti~n------------------s~~-~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV 391 (608)
T 2uvf_A 331 SSLMTLRGVENVYLAGFTVRN------------------PAF-HGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNV 391 (608)
T ss_dssp CCSEEEESEEEEEEESCEEEC------------------CSS-CSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEE
T ss_pred CeEEEEEeeeeEEEeCcEEec------------------CCC-CEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceE
Confidence 457999999999999953332 233 68999999999999999875 23 578999999999
Q ss_pred EEEeEEEECCCC------CCCCCceEeeccccEEEEeeEEecCCceEEecC----CceeEEEEeEEEcCC-ceEEEeecC
Q 015254 177 TFQRVTVTAPEE------SLNTDGIHVGRSSGVTITDSKIGTGDDCISIGD----GTQQMEINKIDCGPG-HGISVGSLG 245 (410)
Q Consensus 177 ~i~n~~i~~~~~------~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s----~~~nv~I~n~~~~~~-~Gi~igs~g 245 (410)
+|+|++|.+.++ +.+.||++...|+||+|+||++..+++++++++ +.+||+|+||++.++ +|++|++..
T Consensus 392 ~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~ 471 (608)
T 2uvf_A 392 MVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTS 471 (608)
T ss_dssp EEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEET
T ss_pred EEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeec
Confidence 999999998665 245666665679999999999999999988877 359999999999976 699999864
Q ss_pred ccCCCCCEEEEEEEceEEecC-CeeEEEEecCCC-----------CCcceeeEEEEeEEEecCC---ccEEEEeeeCCCC
Q 015254 246 KYQNEQPVVGIRVRECNISNT-SNGVRIKTWPAS-----------YPGTASDLHFEDIKMNNVS---NPILLDQVYCPHN 310 (410)
Q Consensus 246 ~~~~~~~v~nv~i~n~~~~~~-~~gi~iks~~g~-----------~~g~v~nI~~~ni~~~~~~---~~i~i~~~~~~~~ 310 (410)
. +.+.++||+|+|++|.+. ..++.|+..+.. ..+.+++|+|+||++++.. .++.|... +
T Consensus 472 g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~--- 545 (608)
T 2uvf_A 472 T--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-T--- 545 (608)
T ss_dssp T--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-G---
T ss_pred C--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-c---
Confidence 3 357899999999999998 589999876532 1356999999999999876 46777642 1
Q ss_pred CCCCCCCCceeEEeEEEEeEEEeecCcceEEEecCCCCceecEEEEeEEEEecCCCCCCceeeeeccccCC-Cccc
Q 015254 311 QCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLACSGGVPCEGVELADISLTYTGPEGPIKSECTNIQPKTS-GKMN 385 (410)
Q Consensus 311 ~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~n~~~~~~-~~~~ 385 (410)
.+..+++||+|+||+++... +..+. .|++++|+||+++...+ ...+.|+++.+... ++.+
T Consensus 546 ------~~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~~~~~--~~~~~~~~v~~~~~~~v~~ 606 (608)
T 2uvf_A 546 ------ANKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFTELRG--DTPWHFSEVKNVKVDGKPV 606 (608)
T ss_dssp ------GGTBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEESCSS--SCSCCEESCBSCCBTTCCC
T ss_pred ------CCCCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEeCCCC--CccEEEEeeeceEEcceEe
Confidence 23458999999999999854 44454 48999999999987653 24699999999884 5443
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.89 E-value=6.7e-22 Score=204.85 Aligned_cols=263 Identities=17% Similarity=0.201 Sum_probs=190.3
Q ss_pred ceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCC---------cEEEEcCceEEee-eeEecCCCCccEEEEEee---
Q 015254 21 ALDVDVTKHGAKQN--ADISQALRDAWKEACAATTP---------SKVLIPQGTYQLS-PVTMEGPCKAAIELQVKG--- 85 (410)
Q Consensus 21 ~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g---------~~v~~P~G~Y~i~-~l~l~~~~~s~v~l~~~G--- 85 (410)
...+||+||||+|| +|||+|||+||+++ +..++ ++||||+|+|+++ +|.++ +++.|.+++
T Consensus 47 ~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a-~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~----~~t~L~G~~~~~ 121 (758)
T 3eqn_A 47 PVFRNVKNYGAKGDGNTDDTAAIQAAINAG-GRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL----YQTQLIGDAKNL 121 (758)
T ss_dssp CSEEEGGGGTCCCEEEEECHHHHHHHHHTT-SCSCTTCCCCSSSCEEEEECSSEEEESSCEECC----TTEEEEECSSSC
T ss_pred eEEEEHHHcCcCCCCCchhHHHHHHHHHHh-hhcccccccccccceEEEECCceEEEcccEEcc----CCeEEEecCCCC
Confidence 34789999999999 99999999999764 32222 6999999999986 89998 899999984
Q ss_pred -EEEeeCCccCccCCCccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccC
Q 015254 86 -TLKALTDPANVKDAGSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSK 164 (410)
Q Consensus 86 -~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~ 164 (410)
+|++.+. |.+ .. .|.+ ...+++|..||.. . ...+..++|++|+ ++..++.
T Consensus 122 pvIka~~~---F~G-~~----------li~~-d~y~~~G~~w~~~-----------~--~~F~r~irNlviD-~t~~~~~ 172 (758)
T 3eqn_A 122 PTLLAAPN---FSG-IA----------LIDA-DPYLAGGAQYYVN-----------Q--NNFFRSVRNFVID-LRQVSGS 172 (758)
T ss_dssp CEEEECTT---CCS-SC----------SEES-SCBCGGGCBSSCG-----------G--GCCCEEEEEEEEE-CTTCSSC
T ss_pred CeEecCCC---CCC-cc----------eeec-cccCCCCcccccc-----------c--cceeeeecceEEe-ccccCCC
Confidence 5665332 221 11 1333 3455677788831 1 3444567777777 5555666
Q ss_pred cceEEEeCeeeEEEEeEEEECCCCC-CCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCc-eEEEe
Q 015254 165 QFHINVIGAKNFTFQRVTVTAPEES-LNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGH-GISVG 242 (410)
Q Consensus 165 ~~~i~~~~~~nv~i~n~~i~~~~~~-~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~-Gi~ig 242 (410)
..+||+..+++..++||.|..+..+ ..++||++..+..+.|+|++|..|+-++.+.. +..+++|++|.++. +|.+-
T Consensus 173 ~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF~~~~taI~~~ 250 (758)
T 3eqn_A 173 ATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTFNNANTAINAI 250 (758)
T ss_dssp EEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEEESCSEEEEEE
T ss_pred ceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEEeChHHHHhhh
Confidence 7899999999999999999997664 34899999988899999999999998888755 78899999998764 66664
Q ss_pred ecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCC--CCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCce
Q 015254 243 SLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPAS--YPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRV 320 (410)
Q Consensus 243 s~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~--~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 320 (410)
.. -..++.+++|.++..||.+..-... ..-.+..|++.|.+++++..+|... +.... .....+
T Consensus 251 w~---------wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t~--~~~~~----~~~~sl 315 (758)
T 3eqn_A 251 WN---------WGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWS--GASSG----HLQGSL 315 (758)
T ss_dssp EB---------SCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEES--SCCCS----SCSSEE
T ss_pred cC---------ceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEec--cCCCC----CCcceE
Confidence 32 1256777777777879988552110 1235789999999999988555443 22211 012357
Q ss_pred eEEeEEEEeEEEee
Q 015254 321 KLDRVSFKNIRGTS 334 (410)
Q Consensus 321 ~i~nVtf~nI~~~~ 334 (410)
.|+||.++|+....
T Consensus 316 vleNv~~~nv~~~v 329 (758)
T 3eqn_A 316 VLNNIQLTNVPVAV 329 (758)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred EEEeEEeeCCCeEE
Confidence 89999999976443
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.87 E-value=3.7e-20 Score=180.48 Aligned_cols=204 Identities=17% Similarity=0.192 Sum_probs=163.5
Q ss_pred eEEEEeeccEEEEeE---EEeccC--cc-------------eEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEE
Q 015254 144 NLSFNAITNSVVQDV---TSLNSK--QF-------------HINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTI 205 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i---~i~ns~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I 205 (410)
++.+.. +|++|.+. +|.... .| .+.+..|+|++|+++++.+++ ..++++..|++|+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 466654 99999997 775432 12 489999999999999999964 46799999999999
Q ss_pred EeeEEecC---------CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEec
Q 015254 206 TDSKIGTG---------DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTW 275 (410)
Q Consensus 206 ~n~~i~~g---------dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~ 275 (410)
+++.+.+. .|+|.+.+ ++||+|+||++..+ ++++|++. +||+|+||++.+.+ |+.|++.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~gh-GisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGGH-GLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESSS-CEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECCc-eEEECcC
Confidence 99999862 57888877 89999999999876 48999862 99999999999876 8999986
Q ss_pred CCCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecCcceEEEecC-------C--
Q 015254 276 PASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLACS-------G-- 346 (410)
Q Consensus 276 ~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~~-------~-- 346 (410)
.....+.++||+|+|+++.+..+++.|++.. ...+.++||+|+||++.....+|+.+... +
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNI----------DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeC----------CCCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 4333488999999999999999999999852 22358999999999999765457776531 2
Q ss_pred CCceecEEEEeEEEEecCCCCCCceee
Q 015254 347 GVPCEGVELADISLTYTGPEGPIKSEC 373 (410)
Q Consensus 347 ~~~~~ni~~~nv~i~~~~~~~~~~~~c 373 (410)
..+++||+|+||+.+...+..+..+.|
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 257999999999998876332444555
No 23
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.87 E-value=4.3e-20 Score=182.83 Aligned_cols=219 Identities=18% Similarity=0.253 Sum_probs=173.4
Q ss_pred ccEEEEEeeEEEeeCC-------ccCcc------------CCCccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCC
Q 015254 77 AAIELQVKGTLKALTD-------PANVK------------DAGSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCK 137 (410)
Q Consensus 77 s~v~l~~~G~i~~~~~-------~~~~~------------~~~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~ 137 (410)
++++|.+.|+|.+... ...|. .+..+|.+.+++|++|+|--+.
T Consensus 109 ~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~------------------ 170 (376)
T 1bhe_A 109 TNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLI------------------ 170 (376)
T ss_dssp BSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEE------------------
T ss_pred EeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEE------------------
Confidence 7899988889887543 23443 1356899999999999993222
Q ss_pred CCCeeeeEEEEeeccEEEEeEEEecc----CcceEEEeCeeeEEEEeEEEECCCCCCCCCceEee------ccccEEEEe
Q 015254 138 KRPIVSNLSFNAITNSVVQDVTSLNS----KQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVG------RSSGVTITD 207 (410)
Q Consensus 138 ~~p~~w~i~~~~~~nv~I~~i~i~ns----~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~------~s~nv~I~n 207 (410)
..|. |.+.+..|++++|+++++.++ ..+++++..|+||.|+|++|.+ ..|+|.+. +|+||+|+|
T Consensus 171 nsp~-~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiks~~~~~~s~nI~I~n 244 (376)
T 1bhe_A 171 NSPN-FHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDDNVAIKAYKGRAETRNISILH 244 (376)
T ss_dssp CCSS-CSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSCSEEEEECTTSCCEEEEEEEE
T ss_pred CCCc-EEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCCeEEEcccCCCCCceEEEEEe
Confidence 2243 689999999999999999885 2578999999999999999997 45788887 599999999
Q ss_pred eEEecCCceEEecC---CceeEEEEeEEEcCC-ceEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCC----C
Q 015254 208 SKIGTGDDCISIGD---GTQQMEINKIDCGPG-HGISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPAS----Y 279 (410)
Q Consensus 208 ~~i~~gdD~i~i~s---~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~----~ 279 (410)
|.+..++ ++++++ +.+||+|+||++.+. .|+.|++.. +..+.++||+|+|++|.+...++.|...+.. .
T Consensus 245 ~~~~~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~ 321 (376)
T 1bhe_A 245 NDFGTGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDK--SAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSN 321 (376)
T ss_dssp EEECSSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCT--TTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCC
T ss_pred eEEEccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEec--CCCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCc
Confidence 9999865 588865 579999999999876 599999852 2457899999999999999999988765422 1
Q ss_pred CcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeec
Q 015254 280 PGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSA 335 (410)
Q Consensus 280 ~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~ 335 (410)
...++||+|+||+.+... ++.+.. . +..+++||+|+||.++..
T Consensus 322 ~~~i~ni~~~ni~gt~~~-~~~l~g---~---------~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 322 VPDWSDITFKDVTSETKG-VVVLNG---E---------NAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp CCEEEEEEEEEEEECSCC-EEEEEC---T---------TCSSCEEEEEEEEECCTT
T ss_pred CcEEEEEEEEEEEEEecc-eEEEEe---C---------CCCCeeeEEEEeEEEecC
Confidence 357999999999999754 555542 1 223578999999998764
No 24
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.87 E-value=6.3e-20 Score=178.95 Aligned_cols=204 Identities=15% Similarity=0.213 Sum_probs=163.1
Q ss_pred eEEEEeeccEEEEeE---EEeccC--cc-------------eEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEE
Q 015254 144 NLSFNAITNSVVQDV---TSLNSK--QF-------------HINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTI 205 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i---~i~ns~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I 205 (410)
++.+.. +|++|.+. +|.... .| .+.+..|+|++|+++++.+++ ..++++..|++|+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 466654 99999997 775432 22 489999999999999999964 46799999999999
Q ss_pred EeeEEecC---------CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEec
Q 015254 206 TDSKIGTG---------DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTW 275 (410)
Q Consensus 206 ~n~~i~~g---------dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~ 275 (410)
+++.+.+. .|+|.+.+ ++||+|+||++..+ ++++|++. +||+|+||++.+.+ |+.|++.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~gh-GisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGGH-GLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESSC-CEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECCc-eEEECcC
Confidence 99999862 57888877 89999999999876 48999862 99999999999876 8999996
Q ss_pred CCCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecCcceEEEecC---------C
Q 015254 276 PASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLACS---------G 346 (410)
Q Consensus 276 ~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~~---------~ 346 (410)
.....+.++||+|+|+++.+..+++.|++.. ...+.++||+|+||++.....+|+.+... +
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVS----------GATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeC----------CCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCC
Confidence 4333589999999999999999999999852 22358999999999999765457666421 2
Q ss_pred --CCceecEEEEeEEEEecCCCCCCceee
Q 015254 347 --GVPCEGVELADISLTYTGPEGPIKSEC 373 (410)
Q Consensus 347 --~~~~~ni~~~nv~i~~~~~~~~~~~~c 373 (410)
..+++||+|+||+.+...+..+..+.|
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 257999999999999876332444554
No 25
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=4.5e-20 Score=181.18 Aligned_cols=203 Identities=14% Similarity=0.164 Sum_probs=160.9
Q ss_pred eEEEEeeccEEEEe---EEEeccC--cc------------eEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEE
Q 015254 144 NLSFNAITNSVVQD---VTSLNSK--QF------------HINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTIT 206 (410)
Q Consensus 144 ~i~~~~~~nv~I~~---i~i~ns~--~~------------~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~ 206 (410)
++.+ +.+|++|.+ -+|.... .| .+++..|+|++|+++++.+++. .++++. |++|+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe-eCCEEEE
Confidence 3666 459999999 5665432 22 4899999999999999999643 359999 9999999
Q ss_pred eeEEecC---------CceEEecCCceeEEEEeEEEcCCc-eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecC
Q 015254 207 DSKIGTG---------DDCISIGDGTQQMEINKIDCGPGH-GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWP 276 (410)
Q Consensus 207 n~~i~~g---------dD~i~i~s~~~nv~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~ 276 (410)
++++.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+.+ |+.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~gh-GisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGGH-GLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESSC-CEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCCc-eeEEeecc
Confidence 9999862 57888876 899999999999875 7999872 99999999999866 89999963
Q ss_pred CCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecCcceEEEecC---------C-
Q 015254 277 ASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLACS---------G- 346 (410)
Q Consensus 277 g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~~---------~- 346 (410)
....+.|+||+|+|+++.+..++++|++.. ...+.++||+|+||++......++.+... +
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTIS----------GATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEET----------TCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeC----------CCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 223589999999999999999999999842 23468999999999988864456666421 1
Q ss_pred -CCceecEEEEeEEEEecCCCCCCceee
Q 015254 347 -GVPCEGVELADISLTYTGPEGPIKSEC 373 (410)
Q Consensus 347 -~~~~~ni~~~nv~i~~~~~~~~~~~~c 373 (410)
..+++||+|+||+.+.+.+..+..+.|
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c 329 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLC 329 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEe
Confidence 247999999999998876322344444
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.86 E-value=1.3e-19 Score=176.47 Aligned_cols=203 Identities=16% Similarity=0.236 Sum_probs=161.5
Q ss_pred eEEEEeeccEEEEeE---EEeccC--cc-------------eEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEE
Q 015254 144 NLSFNAITNSVVQDV---TSLNSK--QF-------------HINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTI 205 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i---~i~ns~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I 205 (410)
++.+. .+|++|.+. +|.... .| .+.+..|+|++|+++++.+++. -++++. |++|+|
T Consensus 62 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPV----QAISVQ-ATNVHL 135 (336)
T ss_dssp SEECC-EESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEE-EEEEEE
T ss_pred EEEEe-cCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCc----cEEEEE-eCCEEE
Confidence 35554 599999997 675432 22 4889999999999999999643 369999 999999
Q ss_pred EeeEEecC---------CceEEecCCceeEEEEeEEEcCCc-eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEec
Q 015254 206 TDSKIGTG---------DDCISIGDGTQQMEINKIDCGPGH-GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTW 275 (410)
Q Consensus 206 ~n~~i~~g---------dD~i~i~s~~~nv~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~ 275 (410)
+++.+.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+.+ |+.|++.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~gh-GisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG---------ESISFTGGTCSGGH-GLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---------EEEEEESCEEESSS-EEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---------eEEEEEeEEEECCc-CceEccC
Confidence 99999873 58899887 899999999998865 7999862 99999999999876 8999996
Q ss_pred CCCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecCcceEEEec--------C-C
Q 015254 276 PASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLAC--------S-G 346 (410)
Q Consensus 276 ~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~--------~-~ 346 (410)
.+...+.++||+|+|+++.+..++++|++.. ...+.++||+|+||++.....+|+.+.. . +
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIY----------KETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEEC----------CCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCC
Confidence 4333489999999999999999999999842 2235899999999999986555766632 1 1
Q ss_pred --CCceecEEEEeEEEEecCCCCCCceee
Q 015254 347 --GVPCEGVELADISLTYTGPEGPIKSEC 373 (410)
Q Consensus 347 --~~~~~ni~~~nv~i~~~~~~~~~~~~c 373 (410)
..+++||+|+||+.+...+..+..+.|
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEc
Confidence 257999999999999876222344555
No 27
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.85 E-value=2.5e-19 Score=175.23 Aligned_cols=218 Identities=11% Similarity=0.105 Sum_probs=170.3
Q ss_pred ccEEEEE--eeEEEeeCCccCccC---------CCccEEE-E-eeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeee
Q 015254 77 AAIELQV--KGTLKALTDPANVKD---------AGSWVSF-N-KIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVS 143 (410)
Q Consensus 77 s~v~l~~--~G~i~~~~~~~~~~~---------~~~~i~~-~-~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w 143 (410)
++++|.+ .|+|.+. ....|.. +..+|.+ . .++|++|+|--+.+ .|. |
T Consensus 69 ~ni~I~G~~~G~IdG~-G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~n------------------sp~-~ 128 (349)
T 1hg8_A 69 SNITITGASGHVIDGN-GQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQN------------------WPV-H 128 (349)
T ss_dssp ESCEEEECTTCEEECC-GGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEEC------------------CSS-E
T ss_pred ccEEEEecCCCEEcCC-cchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEc------------------CCC-c
Confidence 6888988 4788763 2334431 2337888 7 77799999943332 344 6
Q ss_pred eEEEEeeccEEEEeEEEeccC----------------cceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEe
Q 015254 144 NLSFNAITNSVVQDVTSLNSK----------------QFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITD 207 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~----------------~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n 207 (410)
.+.+.+|+|++|+++++.+++ .+++++..|+||+|+|++|.+ ..|+|.+.+++||+|+|
T Consensus 129 ~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n 203 (349)
T 1hg8_A 129 CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVSN 203 (349)
T ss_dssp EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEEE
T ss_pred eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEEe
Confidence 999999999999999998752 458999999999999999997 56889999999999999
Q ss_pred eEEecCCceEEecC-------CceeEEEEeEEEcCC-ceEEEeecCccCCCCCEEEEEEEceEEecCC-eeEEEEecCCC
Q 015254 208 SKIGTGDDCISIGD-------GTQQMEINKIDCGPG-HGISVGSLGKYQNEQPVVGIRVRECNISNTS-NGVRIKTWPAS 278 (410)
Q Consensus 208 ~~i~~gdD~i~i~s-------~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~iks~~g~ 278 (410)
|.+..++ +|++++ +.+||+|+||++.+. +|+.|++... ..+.++||+|+|++|.+.. +++.|...+..
T Consensus 204 ~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g--~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~ 280 (349)
T 1hg8_A 204 MYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG--ATGTINNVTYQNIALTNISTYGVDVQQDYLN 280 (349)
T ss_dssp EEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT--CCEEEEEEEEEEEEEEEEEEEEEEEEEEECS
T ss_pred EEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC--CCccccceEEEEEEEEccccccEEEEeeccC
Confidence 9999876 699955 279999999999874 5999998532 3578999999999999986 58888764311
Q ss_pred --------CCcceeeEEEEeEEEecCC--ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeec
Q 015254 279 --------YPGTASDLHFEDIKMNNVS--NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSA 335 (410)
Q Consensus 279 --------~~g~v~nI~~~ni~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~ 335 (410)
....++||+|+||+.+... .++.+.- . ..+++||+|+||.++..
T Consensus 281 ~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c---~----------~~~c~ni~~~nv~i~~~ 334 (349)
T 1hg8_A 281 GGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILC---G----------DGSCSGFTFSGNAITGG 334 (349)
T ss_dssp SSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEEC---C----------SSCEEEEEEESCEEECC
T ss_pred CCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEe---C----------CCcCcCEEEEeEEEEcC
Confidence 1257999999999998755 3555532 1 14799999999999874
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.84 E-value=3.1e-18 Score=171.54 Aligned_cols=169 Identities=12% Similarity=0.184 Sum_probs=142.8
Q ss_pred eEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEec----CCceEEecCCceeEEEEeEEEcCCc-eEEE
Q 015254 167 HINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGT----GDDCISIGDGTQQMEINKIDCGPGH-GISV 241 (410)
Q Consensus 167 ~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~----gdD~i~i~s~~~nv~I~n~~~~~~~-Gi~i 241 (410)
.+++..|+|++|+++++.+++ ..+|++..|++|+|+|+.|.+ +.|+|.+.. +||+|+||++..++ +|+|
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEe
Confidence 688999999999999999853 357999999999999999997 468999987 89999999999875 7999
Q ss_pred eecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcee
Q 015254 242 GSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSRVK 321 (410)
Q Consensus 242 gs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 321 (410)
++ ..+||+|+||++...+ |++|++... .+.++||+|+|+++.+..+++.|+.. . ..+.
T Consensus 203 ~s--------~~~nI~I~n~~~~~~~-GisIGS~g~--~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~----------g~G~ 260 (422)
T 1rmg_A 203 KS--------PANNILVESIYCNWSG-GCAMGSLGA--DTDVTDIVYRNVYTWSSNQMYMIKSN-G----------GSGT 260 (422)
T ss_dssp EE--------EEEEEEEEEEEEESSS-EEEEEEECT--TEEEEEEEEEEEEEESSSCSEEEEEB-B----------CCEE
T ss_pred CC--------CCcCEEEEeEEEcCCc-ceeecccCC--CCcEEEEEEEeEEEeccceEEEEEec-C----------CCcE
Confidence 87 3599999999998876 999998642 37899999999999999999999972 1 1248
Q ss_pred EEeEEEEeEEEeecCcceEEEecC---------CCCceecEEEEeEEEEecC
Q 015254 322 LDRVSFKNIRGTSATAVAIKLACS---------GGVPCEGVELADISLTYTG 364 (410)
Q Consensus 322 i~nVtf~nI~~~~~~~~~~~i~~~---------~~~~~~ni~~~nv~i~~~~ 364 (410)
++||+|+||++.... .++.+... ...+++||+|+||+.+...
T Consensus 261 v~nI~~~NI~~~~v~-~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 261 VSNVLLENFIGHGNA-YSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp EEEEEEEEEEEEEES-CSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred EEEEEEEeEEEECcc-ccEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 999999999988753 56776531 2357999999999998854
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.82 E-value=1.4e-18 Score=168.77 Aligned_cols=201 Identities=12% Similarity=0.152 Sum_probs=157.3
Q ss_pred eEEEEeeccEEEEeE--EEeccC--cc-------------eEEEeCeeeEEEEeEEEECCCCCCCCCceEeecccc-EEE
Q 015254 144 NLSFNAITNSVVQDV--TSLNSK--QF-------------HINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSG-VTI 205 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i--~i~ns~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~n-v~I 205 (410)
++.+. .+|++|.+- +|.... .| .+.+..|+ ++|+++++.+++. .++++..|++ |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp~----~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSPA----QAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCSS----CCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCCc----ceEEEEccCCeEEE
Confidence 36665 599999983 664321 11 37888999 9999999999653 4599999999 999
Q ss_pred EeeEEecC----------CceEEecCCceeEEEEeEEEcCCc-eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEe
Q 015254 206 TDSKIGTG----------DDCISIGDGTQQMEINKIDCGPGH-GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKT 274 (410)
Q Consensus 206 ~n~~i~~g----------dD~i~i~s~~~nv~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks 274 (410)
+++++.+. .|++.+ + ++||+|+||++..++ +++|++- +||+|+||++...+ |+.|++
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~gh-GisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG---------NNIRFENNQCSGGH-GISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE---------EEEEEESCEEESSC-CEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC---------eeEEEEEEEEECCc-cCeEee
Confidence 99999872 578999 4 899999999999875 7999872 99999999999865 899998
Q ss_pred cCCCCCcceeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCc-eeEEeEEEEeEEEeecCcceEEEec-------CC
Q 015254 275 WPASYPGTASDLHFEDIKMNNVSNPILLDQVYCPHNQCNAKVPSR-VKLDRVSFKNIRGTSATAVAIKLAC-------SG 346 (410)
Q Consensus 275 ~~g~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~-~~i~nVtf~nI~~~~~~~~~~~i~~-------~~ 346 (410)
... .+.|+||+|+|+++.+..++++|++.. ..+ +.++||+|+||++......|+.+.. .+
T Consensus 202 ~g~--~~~v~nV~v~n~~~~~t~~girIKt~~----------g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p 269 (335)
T 1k5c_A 202 IAT--GKHVSNVVIKGNTVTRSMYGVRIKAQR----------TATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNP 269 (335)
T ss_dssp ECT--TCEEEEEEEESCEEEEEEEEEEEEEET----------TCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSC
T ss_pred ccC--CCCEEEEEEEeeEEECCCceEEEEEeC----------CCCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCC
Confidence 742 379999999999999999999999852 223 5899999999999886445777653 12
Q ss_pred --CCceecEEEEeEEEE--ecCCCCCCceeee
Q 015254 347 --GVPCEGVELADISLT--YTGPEGPIKSECT 374 (410)
Q Consensus 347 --~~~~~ni~~~nv~i~--~~~~~~~~~~~c~ 374 (410)
..+++||+|+||++. ...+..+..+.|.
T Consensus 270 ~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 270 GTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp CSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred CCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 357999999999944 4432224455553
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.79 E-value=9.8e-18 Score=172.42 Aligned_cols=233 Identities=11% Similarity=0.126 Sum_probs=170.7
Q ss_pred cE-EEEcCceEEeeeeEecCCCCccEEEEEeeEEEeeCCccCcc-------C---CCccEEEE------eeeeEEEEeCe
Q 015254 55 SK-VLIPQGTYQLSPVTMEGPCKAAIELQVKGTLKALTDPANVK-------D---AGSWVSFN------KIEHLTVSGGG 117 (410)
Q Consensus 55 ~~-v~~P~G~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~-------~---~~~~i~~~------~~~nv~I~G~G 117 (410)
-+ |++++|.++.+++.+.+. .+++|.+.|+|.+.. ...|. . +...+.+. +|+||.|+|..
T Consensus 265 vt~L~L~~GA~l~g~i~~~~~--~nv~ItG~GtIDG~G-~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Git 341 (574)
T 1ogo_X 265 TYWVYLAPGAYVKGAIEYFTK--QNFYATGHGILSGEN-YVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPT 341 (574)
T ss_dssp CCEEEECTTEEEESCEEECCS--SCEEEESSCEEECTT-SCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCE
T ss_pred CceEEecCCcEEEccEEEeCc--eeEEEEeCEEEeCCC-cccccccccccccccCCcceEEEEeccccCCceeEEEECeE
Confidence 46 999999999889988864 789999889987642 12221 1 12334444 89999999965
Q ss_pred EecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccE--EEEeEEEeccC---cceEEEeCeeeEEEEeEEEECCCCCCCC
Q 015254 118 TFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNS--VVQDVTSLNSK---QFHINVIGAKNFTFQRVTVTAPEESLNT 192 (410)
Q Consensus 118 ~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv--~I~~i~i~ns~---~~~i~~~~~~nv~i~n~~i~~~~~~~n~ 192 (410)
+.+ .|. |.+.+..|+|+ +|+++++.+++ .+++++. +||+|+|++|.+ +.
T Consensus 342 i~N------------------Sp~-w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~-----gD 395 (574)
T 1ogo_X 342 INA------------------PPF-NTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHV-----ND 395 (574)
T ss_dssp EEC------------------CSS-CSEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEE-----SS
T ss_pred EEC------------------CCC-cEEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEEC-----CC
Confidence 554 233 68999999999 99999988643 4689988 999999999998 45
Q ss_pred CceEeeccccEEEEeeEEecCCc-e-EEecC---CceeEEEEeEEEcCCc---------eEEEeecCccCC------CCC
Q 015254 193 DGIHVGRSSGVTITDSKIGTGDD-C-ISIGD---GTQQMEINKIDCGPGH---------GISVGSLGKYQN------EQP 252 (410)
Q Consensus 193 DGi~~~~s~nv~I~n~~i~~gdD-~-i~i~s---~~~nv~I~n~~~~~~~---------Gi~igs~g~~~~------~~~ 252 (410)
|+|.+.+ +||+|+||.+..+.. + |.+++ ..+||+|+||++.+.. +..||++..+.+ ...
T Consensus 396 DcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g 474 (574)
T 1ogo_X 396 DAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS 474 (574)
T ss_dssp CSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE
T ss_pred CEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCce
Confidence 7888876 999999999998754 4 88875 4799999999996532 444555432210 112
Q ss_pred EEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEec------CCc-cEEEEeeeCCCCCCCCCCCCceeEEeE
Q 015254 253 VVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNN------VSN-PILLDQVYCPHNQCNAKVPSRVKLDRV 325 (410)
Q Consensus 253 v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nV 325 (410)
+ ||+|+|++|.+...++ |...+ .+.++||+|+||++++ ... +..+.. . + .+++||
T Consensus 475 V-NI~f~NI~~~~v~~~i-i~i~p---~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G----------~--~-~~v~nI 536 (574)
T 1ogo_X 475 I-SMTVSNVVCEGLCPSL-FRITP---LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPA----------A--S-GLTMGL 536 (574)
T ss_dssp E-EEEEEEEEECSSBCEE-EEECC---SEEEEEEEEEEEEETTCBCCSTTCTTCEEECC----------C--T-TCCEEE
T ss_pred E-EEEEEeEEEEceeEee-EEECC---CCCEEEEEEEeEEEeCccccccccccceeEec----------C--C-CccceE
Confidence 8 9999999999988875 54444 4679999999999986 221 111211 1 1 368999
Q ss_pred EEEeEEEeec
Q 015254 326 SFKNIRGTSA 335 (410)
Q Consensus 326 tf~nI~~~~~ 335 (410)
+|+||++...
T Consensus 537 ~~~NV~i~g~ 546 (574)
T 1ogo_X 537 AISAWTIGGQ 546 (574)
T ss_dssp EEEEEEETTE
T ss_pred EEEeEEEeCE
Confidence 9999998653
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.78 E-value=7.4e-18 Score=173.32 Aligned_cols=248 Identities=12% Similarity=0.164 Sum_probs=171.3
Q ss_pred CcE-EEEcCceEEeeeeEecCCCCccEEEEEeeEEEeeCCc------cCccC----CCccEEE------EeeeeEEEEeC
Q 015254 54 PSK-VLIPQGTYQLSPVTMEGPCKAAIELQVKGTLKALTDP------ANVKD----AGSWVSF------NKIEHLTVSGG 116 (410)
Q Consensus 54 g~~-v~~P~G~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~------~~~~~----~~~~i~~------~~~~nv~I~G~ 116 (410)
+.+ ||+++|.++.+++.+.+. .++++|.+.|+|.+.... ..|.. +...+.+ .+|+||.|+|.
T Consensus 222 ~~~~L~l~~GA~L~gs~~~~~~-~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~Gi 300 (549)
T 1x0c_A 222 SVTWVYFAPGAYVKGAVEFLST-ASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGV 300 (549)
T ss_dssp TCCEEEECTTEEEESCEEECCC-SSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEESC
T ss_pred CCCeEecCCCCEEEEEEEEecC-ceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEECc
Confidence 456 999999998888887721 168999888998875321 12211 1223344 78999999996
Q ss_pred eEecCCCCCCCcccccCCCCCCCCeeeeEEEE-ee-cc--EEEEeEEEeccC---cceEEEeCeeeEEEEeEEEECCCCC
Q 015254 117 GTFDGQGAVAPSECEKDDYCKKRPIVSNLSFN-AI-TN--SVVQDVTSLNSK---QFHINVIGAKNFTFQRVTVTAPEES 189 (410)
Q Consensus 117 G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~-~~-~n--v~I~~i~i~ns~---~~~i~~~~~~nv~i~n~~i~~~~~~ 189 (410)
.+.+ .|. |.+.+. .| ++ ++|+++++.+++ .+++++. +||+|+|++|.+
T Consensus 301 ti~N------------------sp~-w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~---- 355 (549)
T 1x0c_A 301 TVSA------------------PPF-NSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHT---- 355 (549)
T ss_dssp EEEC------------------CSS-CSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEE----
T ss_pred EEEC------------------CCc-eeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeC----
Confidence 5543 233 678855 45 69 999999997642 4688888 999999999998
Q ss_pred CCCCceEeeccccEEEEeeEEecCCc-e-EEecC---CceeEEEEeEEEcCCc-------eEEEeecCcc--C------C
Q 015254 190 LNTDGIHVGRSSGVTITDSKIGTGDD-C-ISIGD---GTQQMEINKIDCGPGH-------GISVGSLGKY--Q------N 249 (410)
Q Consensus 190 ~n~DGi~~~~s~nv~I~n~~i~~gdD-~-i~i~s---~~~nv~I~n~~~~~~~-------Gi~igs~g~~--~------~ 249 (410)
..|+|.+.+ +||+|+||.+..+.. + |.+++ ..+||+|+||++.+.. |..|++...+ + +
T Consensus 356 -gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d 433 (549)
T 1x0c_A 356 -DDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSN 433 (549)
T ss_dssp -SSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSC
T ss_pred -CCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcC
Confidence 457888876 999999999987643 5 78874 4799999999997542 4236552111 1 2
Q ss_pred -CCCEEEEEEEceEEecCC-eeEEEEecCCCCCcceeeEEEEeEEEecCC-----c-cEEEEeeeCCCCCCCCCCCCcee
Q 015254 250 -EQPVVGIRVRECNISNTS-NGVRIKTWPASYPGTASDLHFEDIKMNNVS-----N-PILLDQVYCPHNQCNAKVPSRVK 321 (410)
Q Consensus 250 -~~~v~nv~i~n~~~~~~~-~gi~iks~~g~~~g~v~nI~~~ni~~~~~~-----~-~i~i~~~~~~~~~~~~~~~~~~~ 321 (410)
.+.++||+|+|++|.+.. .|+.+....+..++.++||+|+||++++.. . +..+.. +.+- .| ....+
T Consensus 434 ~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G-~~~~-~~----~~~~~ 507 (549)
T 1x0c_A 434 HSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPV-WYDL-NN----GKQIT 507 (549)
T ss_dssp CCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECC-CBBT-TT----CCBCC
T ss_pred CCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeC-CCcc-cc----cccee
Confidence 568999999999998876 554332222233456999999999998765 2 233322 1110 01 12247
Q ss_pred EEeEEEEeEEEeec
Q 015254 322 LDRVSFKNIRGTSA 335 (410)
Q Consensus 322 i~nVtf~nI~~~~~ 335 (410)
++||+|+||++.+.
T Consensus 508 v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 508 VTDFSIEGFTVGNT 521 (549)
T ss_dssp EEEEEEEEEEETTE
T ss_pred eeeEEEEeEEEeCe
Confidence 99999999998764
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.58 E-value=6.7e-14 Score=136.04 Aligned_cols=223 Identities=13% Similarity=0.175 Sum_probs=159.7
Q ss_pred hccceeeEeecC----CCcCC--chhHHHHHHHHHHHhh------cCCCcEEEEcCceEEe-eeeEecCCCCcc-EEEEE
Q 015254 18 AAAALDVDVTKH----GAKQN--ADISQALRDAWKEACA------ATTPSKVLIPQGTYQL-SPVTMEGPCKAA-IELQV 83 (410)
Q Consensus 18 ~~~~~~~~v~d~----Ga~gd--tDdt~aiq~Ai~~a~~------~~~g~~v~~P~G~Y~i-~~l~l~~~~~s~-v~l~~ 83 (410)
.++...+||++| +|+|| +|++++|+++|.+..+ ...|++|++|||+|++ +++.+. .. ++|.+
T Consensus 9 ~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivId----kp~LtL~G 84 (410)
T 2inu_A 9 LNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVD----VSYLTIAG 84 (410)
T ss_dssp ---CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEEC----CTTEEEEC
T ss_pred cccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEe----cCcEEEEe
Confidence 356789999999 88899 9999999999977654 3468999999999986 788887 44 88887
Q ss_pred ee--E----EEeeCCccC----ccCCCccEEEEee-----------------eeEEEEeCeEecCC-----CCCCCcccc
Q 015254 84 KG--T----LKALTDPAN----VKDAGSWVSFNKI-----------------EHLTVSGGGTFDGQ-----GAVAPSECE 131 (410)
Q Consensus 84 ~G--~----i~~~~~~~~----~~~~~~~i~~~~~-----------------~nv~I~G~G~idG~-----g~~~~~~~~ 131 (410)
++ . |..-..... |+. +..+.+... ++|++.| -.|+|- |...
T Consensus 85 ~~~g~~s~~Id~~~~~~g~~~~~g~-Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~s~----- 157 (410)
T 2inu_A 85 FGHGFFSRSILDNSNPTGWQNLQPG-ASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKNSY----- 157 (410)
T ss_dssp SCCCCCCHHHHHTSCCTTCSCCSCC-SEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTTSC-----
T ss_pred cCCCcceeEEecccccCcccccCCC-CcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCCCc-----
Confidence 54 2 221000012 222 233333322 4555555 334443 3321
Q ss_pred cCCCCCCCCeeeeEEEEe-eccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeec-cccEEEEeeE
Q 015254 132 KDDYCKKRPIVSNLSFNA-ITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGR-SSGVTITDSK 209 (410)
Q Consensus 132 ~~~~~~~~p~~w~i~~~~-~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~-s~nv~I~n~~ 209 (410)
..... .|.+.. .++++|+++.|.+. .++|.+..+++..|++..|.. ...||+++. ++...|+++.
T Consensus 158 -----~~~dA--GI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~ 224 (410)
T 2inu_A 158 -----HNGKT--GIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNH 224 (410)
T ss_dssp -----CCSCE--EEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCE
T ss_pred -----ccCce--eEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecce
Confidence 12233 677765 88999999999887 589999999999999999995 456899998 8999999999
Q ss_pred EecCCce--EEecCCceeEEEEeEEE-cCC-ceEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEe
Q 015254 210 IGTGDDC--ISIGDGTQQMEINKIDC-GPG-HGISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKT 274 (410)
Q Consensus 210 i~~gdD~--i~i~s~~~nv~I~n~~~-~~~-~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks 274 (410)
+..++|+ |.+.. +++.+|+++.+ ..+ .|+.+- ...+-.|+++.+.+...|+.+..
T Consensus 225 i~~~~dG~gIyl~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 225 MGAGPDGVTLLAEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp EECCTTSEEEEEES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEEEE
T ss_pred eeecCCCCEEEEEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEEEE
Confidence 9999888 66665 78899999977 434 488772 23666789999999888887643
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.53 E-value=1.5e-11 Score=125.89 Aligned_cols=224 Identities=13% Similarity=0.156 Sum_probs=148.8
Q ss_pred CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeC------e
Q 015254 100 GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIG------A 173 (410)
Q Consensus 100 ~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~------~ 173 (410)
..+|.+.+++|++|++--+.+. |. |.+.+....+ | ++++++. |
T Consensus 134 P~lI~f~~c~NV~I~gVti~NS------------------p~-~gI~I~~~~~---------N---DGid~DGi~fd~~S 182 (609)
T 3gq8_A 134 ESNLSIRACHNVYIRDIEAVDC------------------TL-HGIDITCGGL---------D---YPYLGDGTTAPNPS 182 (609)
T ss_dssp TCSEEEESCEEEEEEEEEEESC------------------SS-CSEEEECSSS---------S---CCCCCTTCCCSSCC
T ss_pred ccEEEEEeeceEEEEeeEEEeC------------------CC-CCeEEeCCCC---------C---ccccCCCccccccc
Confidence 5679999999999999322221 11 1333332221 1 4566666 9
Q ss_pred eeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecC-----CceEEecCCceeEEEEeEEEcCC-ceEEEeecCcc
Q 015254 174 KNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTG-----DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKY 247 (410)
Q Consensus 174 ~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~ 247 (410)
+||+|+|++|.+ ...|||.+.+|+||+|+||+++.. ..+|.+.++++||+|+||++.+. .|+.|++.+
T Consensus 183 ~NV~I~Nc~I~~----tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~-- 256 (609)
T 3gq8_A 183 ENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG-- 256 (609)
T ss_dssp EEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT--
T ss_pred eeEEEEeeEEEe----cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC--
Confidence 999999999986 356999999999999999999544 47899998889999999999876 489999864
Q ss_pred CCCCCEEEEEEEceEEecCCe--eEEEE-ecCC--CCCcceeeEEEEeEEEecCC-c----------cEEEEee------
Q 015254 248 QNEQPVVGIRVRECNISNTSN--GVRIK-TWPA--SYPGTASDLHFEDIKMNNVS-N----------PILLDQV------ 305 (410)
Q Consensus 248 ~~~~~v~nv~i~n~~~~~~~~--gi~ik-s~~g--~~~g~v~nI~~~ni~~~~~~-~----------~i~i~~~------ 305 (410)
+.+.++||+|+|+...+.-. .++.- .+.. .......||.+.|++..... + ++.+..+
T Consensus 257 -~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~ 335 (609)
T 3gq8_A 257 -DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVIN 335 (609)
T ss_dssp -TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEE
T ss_pred -CCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEc
Confidence 45789999999976665433 33321 1111 11246899999999886432 1 3333321
Q ss_pred ----eCCCCCCCCCCCCceeE----EeEEEEeEEEeecC--cceEEEecCCCCceecEEEEeEEEEecC
Q 015254 306 ----YCPHNQCNAKVPSRVKL----DRVSFKNIRGTSAT--AVAIKLACSGGVPCEGVELADISLTYTG 364 (410)
Q Consensus 306 ----~~~~~~~~~~~~~~~~i----~nVtf~nI~~~~~~--~~~~~i~~~~~~~~~ni~~~nv~i~~~~ 364 (410)
+.++.... . .+...+ +||++.+|.+++-. ...+++.|.+.. ++.|+++|+++....
T Consensus 336 ~~~~~~d~~y~~-~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~~~-~~~v~i~n~~i~~s~ 401 (609)
T 3gq8_A 336 GLTGYTDDPNLL-T-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGSRG-GDAVNISNVTLNNSG 401 (609)
T ss_dssp EEEEECSCTTSC-C-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCCCT-TCCEEEEEEEEESCC
T ss_pred CceEccCCcccc-C-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCCCc-CCeEEEeccEEeecc
Confidence 22221111 1 222333 79999999988754 346777776543 777888888876543
No 34
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.52 E-value=1.5e-11 Score=127.87 Aligned_cols=224 Identities=13% Similarity=0.153 Sum_probs=145.5
Q ss_pred CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEEeC------e
Q 015254 100 GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINVIG------A 173 (410)
Q Consensus 100 ~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~~~------~ 173 (410)
..+|.+.+|+|++|++--+.+. |. |.+.+....+ .++++++. |
T Consensus 134 P~lI~f~~ckNV~I~gVti~NS------------------p~-~gI~I~np~~------------NDGid~DGi~fdi~S 182 (772)
T 3gqn_A 134 ESNLSIRACHNVYIRDIEAVDC------------------TL-HGIDITCGGL------------DYPYLGDGTTAPNPS 182 (772)
T ss_dssp TCSEEEESCEEEEEEEEEEESC------------------SS-CSEEEECSSS------------SCCCCCTTCCCSSCC
T ss_pred ccEEEEEeeceEEEEeEEEEeC------------------CC-CCEEEeCCCc------------CCcCCCcCccccccc
Confidence 4678999999999998322211 11 1233222221 14566666 9
Q ss_pred eeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecC-----CceEEecCCceeEEEEeEEEcCC-ceEEEeecCcc
Q 015254 174 KNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTG-----DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKY 247 (410)
Q Consensus 174 ~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~ 247 (410)
+||.|+|++|.+ ...|||.+.+|+||+|+||.++.. ..+|.+.++++||+|+||++.+. .|+.|++.+
T Consensus 183 ~NV~I~Nc~I~n----tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~-- 256 (772)
T 3gqn_A 183 ENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG-- 256 (772)
T ss_dssp EEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT--
T ss_pred ceEEEEeeEEEe----cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC--
Confidence 999999999987 356999999999999999999544 57899998889999999999876 489999764
Q ss_pred CCCCCEEEEEEEceEEecCCe--eEEE-EecC-CC-CCcceeeEEEEeEEEecCC-c----------cEEEEee------
Q 015254 248 QNEQPVVGIRVRECNISNTSN--GVRI-KTWP-AS-YPGTASDLHFEDIKMNNVS-N----------PILLDQV------ 305 (410)
Q Consensus 248 ~~~~~v~nv~i~n~~~~~~~~--gi~i-ks~~-g~-~~g~v~nI~~~ni~~~~~~-~----------~i~i~~~------ 305 (410)
+.+.++||+|.++...+.-. .++. ..+. +. ..-...||.+.|++..... + ++.+..+
T Consensus 257 -~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~ 335 (772)
T 3gqn_A 257 -DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVIN 335 (772)
T ss_dssp -TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEE
T ss_pred -CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEec
Confidence 45789999999755543322 3321 1111 00 1136788999998875432 1 3333321
Q ss_pred ----eCCCCCCCCCCCCceeE----EeEEEEeEEEeecC--cceEEEecCCCCceecEEEEeEEEEecC
Q 015254 306 ----YCPHNQCNAKVPSRVKL----DRVSFKNIRGTSAT--AVAIKLACSGGVPCEGVELADISLTYTG 364 (410)
Q Consensus 306 ----~~~~~~~~~~~~~~~~i----~nVtf~nI~~~~~~--~~~~~i~~~~~~~~~ni~~~nv~i~~~~ 364 (410)
+.++.... . .+...+ +||++.+|.+++-. ...+++.|.+.. ++.|+++|+++....
T Consensus 336 ~~~~igd~~y~~-~-~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~~~-~~~v~i~n~~i~~s~ 401 (772)
T 3gqn_A 336 GLTGYTDDPNLL-T-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGSRG-GDAVNISNVTLNNSG 401 (772)
T ss_dssp EEEEECSCTTSC-C-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCSTTC-CEEEEEEEEEEESCC
T ss_pred CceeccCccccc-C-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCCCC-CCeEEEeccEEeecc
Confidence 22221111 1 222333 79999999988754 346777776543 777888888876543
No 35
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.48 E-value=1.2e-12 Score=131.72 Aligned_cols=159 Identities=14% Similarity=0.139 Sum_probs=120.1
Q ss_pred EeeccEEEEeE----EEeccC-----cceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEE
Q 015254 148 NAITNSVVQDV----TSLNSK-----QFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCIS 218 (410)
Q Consensus 148 ~~~~nv~I~~i----~i~ns~-----~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 218 (410)
.+.+|++|.+- ++.... -..+.+..|+|++|+++++.+.. .+..+.+|.+. .+|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 56788888876 443221 12578899999999999999832 12334344333 357777
Q ss_pred ecCCceeEEEEeEEEcCCc-eEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEec-----CCCCCcceeeEEEEeEE
Q 015254 219 IGDGTQQMEINKIDCGPGH-GISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTW-----PASYPGTASDLHFEDIK 292 (410)
Q Consensus 219 i~s~~~nv~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~-----~g~~~g~v~nI~~~ni~ 292 (410)
+ .++||+|+||++.+++ ++ |+. ....++||+|+||++.+ ..|++|+++ .+. .|.++||+|+|++
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~-~g~v~NI~~~Ni~ 241 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNYK-QGGIRNIFADNIR 241 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHT-CCEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCC-CCcEEEEEEEeEE
Confidence 7 4799999999999875 55 322 34678999999999999 889999987 443 5899999999999
Q ss_pred EecCCccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeecCcceEEEec
Q 015254 293 MNNVSNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSATAVAIKLAC 344 (410)
Q Consensus 293 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~~~~~~~i~~ 344 (410)
++++.++|.|++ ....++||+|+||+++.. ..++.+.+
T Consensus 242 ~~nv~~~I~I~p-------------~~~~isnItfeNI~~t~~-~~aI~i~q 279 (464)
T 1h80_A 242 CSKGLAAVMFGP-------------HFMKNGDVQVTNVSSVSC-GSAVRSDS 279 (464)
T ss_dssp EESSSEEEEEEC-------------TTCBCCCEEEEEEEEESS-SCSEEECC
T ss_pred EECCceeEEEeC-------------CCceEeEEEEEEEEEEcc-ceeEEEec
Confidence 999999999983 113689999999999985 46666654
No 36
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.42 E-value=3.1e-12 Score=130.27 Aligned_cols=206 Identities=9% Similarity=-0.042 Sum_probs=141.9
Q ss_pred ccEEEEEeeEEEeeCCccCccCC-----CccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCC-CeeeeEEE---
Q 015254 77 AAIELQVKGTLKALTDPANVKDA-----GSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKR-PIVSNLSF--- 147 (410)
Q Consensus 77 s~v~l~~~G~i~~~~~~~~~~~~-----~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~-p~~w~i~~--- 147 (410)
++++|.+.|+|.+. ....|+.. ++.+.+.+++ |+|--+. +. |. |.+.+
T Consensus 150 ~NItItG~GtIDGq-G~~wW~~~~~~~~RP~l~f~~c~---I~GITi~------------------NSDP~-w~I~iG~~ 206 (600)
T 2x6w_A 150 ENCHIYGHGVVDFG-GYEFGASSQLRNGVAFGRSYNCS---VTGITFQ------------------NGDVT-WAITLGWN 206 (600)
T ss_dssp EEEEEESSCEEECT-TCCCSSTTCCEEEEECCSEEEEE---EESCEEE------------------SCCCS-CSEEECBT
T ss_pred eeEEEecceeeeCC-ccccccccccCCCCCEEEEeeeE---EeCeEEE------------------CCCCc-cEEEeCCC
Confidence 67888888888763 23344321 2335556554 6663222 23 44 68999
Q ss_pred EeeccEEEEeEE----EeccC-cceEEEeCeeeEEEEeEEEECCCCCCCCCceEe-eccc--cEEEEeeEEecCCceEEe
Q 015254 148 NAITNSVVQDVT----SLNSK-QFHINVIGAKNFTFQRVTVTAPEESLNTDGIHV-GRSS--GVTITDSKIGTGDDCISI 219 (410)
Q Consensus 148 ~~~~nv~I~~i~----i~ns~-~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~-~~s~--nv~I~n~~i~~gdD~i~i 219 (410)
..|+|++|++++ +.++| .+|+ |.|+|+.|.+ ..|+|.+ .+.+ ++.++ .+..++.+|++
T Consensus 207 ~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~GHgGISI 272 (600)
T 2x6w_A 207 GYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLHQHDTFYR 272 (600)
T ss_dssp TBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEECSSSEEEE
T ss_pred CCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcCCCCcEEe
Confidence 999999999999 77644 3566 8889988887 4688999 6533 45666 56678889999
Q ss_pred cC----CceeEEEEeEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecC-CCCCcceeeEEEEeEEEe
Q 015254 220 GD----GTQQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWP-ASYPGTASDLHFEDIKMN 294 (410)
Q Consensus 220 ~s----~~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~-g~~~g~v~nI~~~ni~~~ 294 (410)
++ +.+||+|+| . |++.. ++.+.++||+|+|++|.+...++.+...+ +...+.++||+|+||+.+
T Consensus 273 GSe~~ggV~NV~V~N-r--------IKt~~--G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgT 341 (600)
T 2x6w_A 273 GSTVNGYCRGAYVVM-H--------AAEAA--GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVS 341 (600)
T ss_dssp SCEEEEESEEEEEEE-C--------GGGCT--TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEE
T ss_pred cccccCcEEEEEEEE-E--------EEeec--CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEE
Confidence 87 357888888 3 33321 14578999999999999999888887653 223478999999999998
Q ss_pred cCCc-------cEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeec
Q 015254 295 NVSN-------PILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSA 335 (410)
Q Consensus 295 ~~~~-------~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~ 335 (410)
.... +..|.... ..|. +....+||+|+|+|++....
T Consensus 342 sas~aav~~~~g~~i~g~p---~~~~--~~~~~~Ie~V~~~~~~~~~~ 384 (600)
T 2x6w_A 342 IGERAAFSAPFGAFIDIGP---DNSG--ASNVQDIQRVLVTGNSFYAP 384 (600)
T ss_dssp ECSCCTTSSSCEEEEEECC---CTTC--CSSSCCEEEEEEESCEEECC
T ss_pred eccccccccccceEEEecC---cccc--cccccceeEEEEeceEEEcC
Confidence 6543 24444421 1121 23446899999999998653
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.36 E-value=8.5e-11 Score=116.01 Aligned_cols=194 Identities=13% Similarity=0.087 Sum_probs=141.5
Q ss_pred eEEEEeec-cEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeec-cccEEEEeeEEecCCceEEec-
Q 015254 144 NLSFNAIT-NSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGR-SSGVTITDSKIGTGDDCISIG- 220 (410)
Q Consensus 144 ~i~~~~~~-nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~-s~nv~I~n~~i~~gdD~i~i~- 220 (410)
.+.+..|. ++++++..+.+...+++.+..|++..|++.++.. .+.|||++.. |++++|+++.+...++|+.+.
T Consensus 150 gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~----~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~ 225 (377)
T 2pyg_A 150 GFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYA----NDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQ 225 (377)
T ss_dssp SEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEES----CSSCSEEEETTCEEEEEESCEEESCSSCSEEEE
T ss_pred eEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEc----cccCcEEEEeccCCeEEECCEEECccCceEEEe
Confidence 67777655 7889999998888899999999999999998776 3689999887 999999999999999998872
Q ss_pred ------CCceeEEEEeEEEcC--CceEEEeecCccCCCCCEEEEEEEceEEecC-CeeEEEEecCCCCCcceeeEEEEeE
Q 015254 221 ------DGTQQMEINKIDCGP--GHGISVGSLGKYQNEQPVVGIRVRECNISNT-SNGVRIKTWPASYPGTASDLHFEDI 291 (410)
Q Consensus 221 ------s~~~nv~I~n~~~~~--~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~-~~gi~iks~~g~~~g~v~nI~~~ni 291 (410)
..+++++|+++.+.. ++|+.+.. +++++|+|+++.++ ..|++++. +++++|+|.
T Consensus 226 ~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~---------~~~v~i~~N~i~~~~~~GI~i~g--------~~~~~i~~N 288 (377)
T 2pyg_A 226 RGLEDLALPSNILIDGGAYYDNAREGVLLKM---------TSDITLQNADIHGNGSSGVRVYG--------AQDVQILDN 288 (377)
T ss_dssp CCSSCCCCCEEEEEESCEEESCSSCSEEEEE---------EEEEEEESCEEESCSSCSEEEEE--------EEEEEEESC
T ss_pred ccccCCCCCccEEEECCEEEcCccCceEecc---------ccCeEEECCEEECCCCceEEEec--------CCCcEEECc
Confidence 457999999999875 46887743 69999999999998 78999962 789999999
Q ss_pred EEecCCc----cEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEEeec--CcceEEEecCCCCceecEEEEeEEEEecC
Q 015254 292 KMNNVSN----PILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRGTSA--TAVAIKLACSGGVPCEGVELADISLTYTG 364 (410)
Q Consensus 292 ~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~~~~--~~~~~~i~~~~~~~~~ni~~~nv~i~~~~ 364 (410)
++.+... ++.+.+.|+...... .....-+++++++.++... ....+.+.. ..+++++++|..+....
T Consensus 289 ~i~~n~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~---~~~~~~~i~~n~i~~~~ 361 (377)
T 2pyg_A 289 QIHDNAQAAAVPEVLLQSFDDTAGAS---GTYYTTLNTRIEGNTISGSANSTYGIQERN---DGTDYSSLIDNDIAGVQ 361 (377)
T ss_dssp EEESCCSSSSCCSEEEECEEETTSSS---CEEECCBCCEEESCEEECCSSCCEEEEECS---SSCBCCEEESCEEESSS
T ss_pred EEECCcccccccceEEEEecCCCccc---eeeeeccCeEEECCEEECcCCCccceEEcc---CCCccEEEECcEEeCCc
Confidence 9987653 222222333211000 0000014555555555542 223455533 45678899998887654
No 38
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.20 E-value=5.3e-10 Score=113.48 Aligned_cols=202 Identities=14% Similarity=0.085 Sum_probs=98.6
Q ss_pred CcchhhHHHHHHHHHhhhccce--eeEeecCCCcCCchhHHHHHHHHHHHhhcCCCcEEEEcCceEEeeeeEecCCC--C
Q 015254 1 MAKSNILALFLSLLMLSAAAAL--DVDVTKHGAKQNADISQALRDAWKEACAATTPSKVLIPQGTYQLSPVTMEGPC--K 76 (410)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~--~~~v~d~Ga~gdtDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l~l~~~~--~ 76 (410)
|+|+.+++++|++|+++++.|. ++.|. +.+.||+|++. ++ .|++|++++|+|.-..+.+.+.. .
T Consensus 1 M~~~~~~~~~lll~~~~~~~A~~~~i~V~---------~~~~Lq~Ai~~-A~--pGDtI~L~~GtY~~~~i~i~~sGt~~ 68 (506)
T 1dbg_A 1 MKMLNKLAGYLLPIMVLLNVAPCLGQVVA---------SNETLYQVVKE-VK--PGGLVQIADGTYKDVQLIVSNSGKSG 68 (506)
T ss_dssp -------------------------CEEC---------SHHHHHHHHHH-CC--TTCEEEECSEEEETCEEEECCCCBTT
T ss_pred CchHHHHHHHHHHHHHhhhhheeeEEEeC---------CHHHHHHHHHh-CC--CCCEEEECCCEEecceEEEecCCcCC
Confidence 7776655444333344333333 34543 35679999864 33 46899999999975466663210 1
Q ss_pred ccEEEEEe--e-E-EEeeCCccCccCCCccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeecc
Q 015254 77 AAIELQVK--G-T-LKALTDPANVKDAGSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITN 152 (410)
Q Consensus 77 s~v~l~~~--G-~-i~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~n 152 (410)
+.++|..+ + . |.+ ...+.+.+ ++++|+| -+|.+.+..... .. ...+. .+.+. .++
T Consensus 69 ~pItl~~~~~~~~vi~G----------~~~l~i~g-~~v~i~G-L~i~~~~~~~~~-~~-----~~~~~--~iav~-G~~ 127 (506)
T 1dbg_A 69 LPITIKALNPGKVFFTG----------DAKVELRG-EHLILEG-IWFKDGNRAIQA-WK-----SHGPG--LVAIY-GSY 127 (506)
T ss_dssp BCEEEEESSTTSEEEEE----------SCEEEECS-SSEEEES-CEEEEECCCTTT-CC-----TTSCC--SEEEC-SSS
T ss_pred CCEEEECCCCCccEEeC----------CceEEEEc-CCEEEEC-eEEECCCcceee-ee-----ccccc--ceEEe-cCC
Confidence 35566553 1 1 211 12233332 5666665 233222211000 00 00122 34444 478
Q ss_pred EEEEeEEEeccCcce--EEEe--------CeeeEEEEeEEEECCCCCCCCC----ceEeec-------cccEEEEeeEEe
Q 015254 153 SVVQDVTSLNSKQFH--INVI--------GAKNFTFQRVTVTAPEESLNTD----GIHVGR-------SSGVTITDSKIG 211 (410)
Q Consensus 153 v~I~~i~i~ns~~~~--i~~~--------~~~nv~i~n~~i~~~~~~~n~D----Gi~~~~-------s~nv~I~n~~i~ 211 (410)
++|++++|.+... + +.+. ..++..|++++|.+........ |++++. +.+.+|+++.|.
T Consensus 128 ~~I~nn~I~~~~~-gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~ 206 (506)
T 1dbg_A 128 NRITACVFDCFDE-ANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFS 206 (506)
T ss_dssp CEEESCEEESCCS-SCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEE
T ss_pred eEEEeeEEEcCCC-CceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEc
Confidence 8899999887632 2 3332 4566788888888743322222 677665 358888888887
Q ss_pred c------CCceEEecC---CceeEEEEeEEEcCC
Q 015254 212 T------GDDCISIGD---GTQQMEINKIDCGPG 236 (410)
Q Consensus 212 ~------gdD~i~i~s---~~~nv~I~n~~~~~~ 236 (410)
. +-+.+-++. .+.+.+|+++.+...
T Consensus 207 ~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~ 240 (506)
T 1dbg_A 207 NPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQ 240 (506)
T ss_dssp ECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEE
T ss_pred ccccCCCccccEEEEEEecccCCcEEECCEEEec
Confidence 4 234455442 246778888877653
No 39
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.14 E-value=2.6e-09 Score=105.85 Aligned_cols=245 Identities=12% Similarity=0.097 Sum_probs=154.6
Q ss_pred hccceeeEeecCCCc---C-C-chhHHHHHHHHHHHhhcCCCcEEEEcCceEE--e-----eeeEecCCCCcc-----EE
Q 015254 18 AAAALDVDVTKHGAK---Q-N-ADISQALRDAWKEACAATTPSKVLIPQGTYQ--L-----SPVTMEGPCKAA-----IE 80 (410)
Q Consensus 18 ~~~~~~~~v~d~Ga~---g-d-tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~--i-----~~l~l~~~~~s~-----v~ 80 (410)
.+++.++.|..-|-. | . ...- .||+|++.| + .|++|+|.+|+|. + ..|.+.. ++ ++
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a-~--pGdtI~l~~GtY~~~~~e~~~~~i~~~~---sGt~~~pIt 83 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAV-N--PGELILLKPGTYTIPYTQGKGNTITFNK---SGKDGAPIY 83 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHC-C--TTCEEEECSEEEECCCBTTBCCCEEECC---CCBTTBCEE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCc-cHHHHHhhC-C--CCCEEEECCCeEccccccccceeEEecC---CCCCCCCEE
Confidence 345778888766532 2 1 1223 699998643 3 4689999999999 2 3455542 33 66
Q ss_pred EEEee---EEEeeCCc-cCccCCCccEEEEeeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEE
Q 015254 81 LQVKG---TLKALTDP-ANVKDAGSWVSFNKIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQ 156 (410)
Q Consensus 81 l~~~G---~i~~~~~~-~~~~~~~~~i~~~~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~ 156 (410)
|...+ .+.-.... ..|......|.+. .+.++|+| -.|...+. + .|.+.. .+.+|+
T Consensus 84 i~~~~g~~~vI~~~~~~g~~~~~~~~i~i~-~~~~~i~g-l~I~n~g~---------------~---GI~v~g-s~~~i~ 142 (400)
T 1ru4_A 84 VAAANCGRAVFDFSFPDSQWVQASYGFYVT-GDYWYFKG-VEVTRAGY---------------Q---GAYVIG-SHNTFE 142 (400)
T ss_dssp EEEGGGCCEEEECCCCTTCCCTTCCSEEEC-SSCEEEES-EEEESCSS---------------C---SEEECS-SSCEEE
T ss_pred EEEecCCCCEEeCCccCCccccceeEEEEE-CCeEEEEe-EEEEeCCC---------------C---cEEEeC-CCcEEE
Confidence 66642 22211110 1111000234443 46677776 23322111 1 355655 678899
Q ss_pred eEEEeccCcceEEEeCee-eEEEEeEEEECCCC----CCCCCceEeecc--ccEEEEeeEEe-cCCceEEecCCceeEEE
Q 015254 157 DVTSLNSKQFHINVIGAK-NFTFQRVTVTAPEE----SLNTDGIHVGRS--SGVTITDSKIG-TGDDCISIGDGTQQMEI 228 (410)
Q Consensus 157 ~i~i~ns~~~~i~~~~~~-nv~i~n~~i~~~~~----~~n~DGi~~~~s--~nv~I~n~~i~-~gdD~i~i~s~~~nv~I 228 (410)
++++.+....+|.+.... +.+|+++++....+ ..+.|||.+..+ ++.+|++|.++ +.||++.+......++|
T Consensus 143 n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i 222 (400)
T 1ru4_A 143 NTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVI 222 (400)
T ss_dssp SCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEE
T ss_pred eEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEE
Confidence 999998877789988744 88899999987543 246799988643 78899999987 46889998766677999
Q ss_pred EeEEEcC--------------CceEEEeecCccCCCCCEEEEEEEceEEecCC-eeEEEEecCCCCCcceeeEEEEeEEE
Q 015254 229 NKIDCGP--------------GHGISVGSLGKYQNEQPVVGIRVRECNISNTS-NGVRIKTWPASYPGTASDLHFEDIKM 293 (410)
Q Consensus 229 ~n~~~~~--------------~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~iks~~g~~~g~v~nI~~~ni~~ 293 (410)
+||..+. +.|+.+|++ ....+.+++||...+.. .|+..... -.+++++|.++
T Consensus 223 ~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~------~~~~~~~v~nn~a~~N~~~G~~~n~~-------~~~~~i~nNt~ 289 (400)
T 1ru4_A 223 ENSWAFRNGINYWNDSAFAGNGNGFKLGGN------QAVGNHRITRSVAFGNVSKGFDQNNN-------AGGVTVINNTS 289 (400)
T ss_dssp ESCEEESTTCCCSCCTTCCCCCCSEECCCT------TCCCCCEEESCEEESCSSEEEECTTC-------SSCCEEESCEE
T ss_pred EeEEEECCccccccccccccCCCCEEEecc------CCcCCEEEEeeEEECCcCcCEeecCC-------CCCEEEECeEE
Confidence 9998742 236777643 34456778888887754 57755222 23467777777
Q ss_pred ecCCccEEEE
Q 015254 294 NNVSNPILLD 303 (410)
Q Consensus 294 ~~~~~~i~i~ 303 (410)
.+....+.+.
T Consensus 290 ~~N~~~~~~~ 299 (400)
T 1ru4_A 290 YKNGINYGFG 299 (400)
T ss_dssp ESSSEEEEEC
T ss_pred ECCccceEEe
Confidence 7666555554
No 40
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.99 E-value=2e-09 Score=112.08 Aligned_cols=86 Identities=16% Similarity=0.254 Sum_probs=63.6
Q ss_pred ceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEee-eeEecCCCCccEEEEEee--EEEeeCCccC
Q 015254 21 ALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQLS-PVTMEGPCKAAIELQVKG--TLKALTDPAN 95 (410)
Q Consensus 21 ~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~-~l~l~~~~~s~v~l~~~G--~i~~~~~~~~ 95 (410)
+..++|+||||+|| +|||+|||+||++| + ++.+||||+|+|++. +|.++ ++++|.+++ +|... . ..
T Consensus 398 ~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-~--~g~~v~~P~G~Y~vt~Ti~ip----~~~~ivG~~~~~I~~~-G-~~ 468 (758)
T 3eqn_A 398 SDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-A--GCKIIFFDAGTYIVTDTIQIP----AGTQIVGEVWSVIMGT-G-SK 468 (758)
T ss_dssp GGEEETTTTTCCCEEEEECHHHHHHHHHHH-T--TTSEEECCSEEEEESSCEEEC----TTCEEECCSSEEEEEC-S-GG
T ss_pred cceEEeeeccccCCCCchhHHHHHHHHHHh-c--CCCEEEECCCEeEECCeEEcC----CCCEEEecccceEecC-C-cc
Confidence 56999999999999 99999999999743 2 458999999999996 89999 899998874 45442 2 22
Q ss_pred ccCC---CccEEE---EeeeeEEEEe
Q 015254 96 VKDA---GSWVSF---NKIEHLTVSG 115 (410)
Q Consensus 96 ~~~~---~~~i~~---~~~~nv~I~G 115 (410)
|... .+++.+ ...-.|.|.|
T Consensus 469 F~d~~~P~pvv~VG~~gd~G~veisd 494 (758)
T 3eqn_A 469 FTDYNNPQPVIQVGAPGSSGVVEITD 494 (758)
T ss_dssp GCCTTSCEEEEEESCTTCBSCEEEES
T ss_pred ccCCCCCeeeEEeCCCCCCCeEEEEe
Confidence 3221 355555 2234666666
No 41
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.71 E-value=2e-06 Score=82.71 Aligned_cols=77 Identities=17% Similarity=0.104 Sum_probs=55.5
Q ss_pred CCCceEeeccccEEEEeeEEecC-CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccC--CCCCEEEEEEEceEEecC
Q 015254 191 NTDGIHVGRSSGVTITDSKIGTG-DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQ--NEQPVVGIRVRECNISNT 266 (410)
Q Consensus 191 n~DGi~~~~s~nv~I~n~~i~~g-dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~--~~~~v~nv~i~n~~~~~~ 266 (410)
..|+|.+..+++|+|..|.+..+ |.++.++.++.+|+|++|.|... .+.-+|+.-... ....-.+|+|.++.+.+.
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 68999999999999999999875 45588887789999999999864 356676531000 000124789999999775
Q ss_pred C
Q 015254 267 S 267 (410)
Q Consensus 267 ~ 267 (410)
.
T Consensus 195 ~ 195 (340)
T 3zsc_A 195 I 195 (340)
T ss_dssp C
T ss_pred C
Confidence 3
No 42
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.69 E-value=1.4e-06 Score=84.71 Aligned_cols=112 Identities=12% Similarity=0.162 Sum_probs=70.4
Q ss_pred eEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecC----------
Q 015254 144 NLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTG---------- 213 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g---------- 213 (410)
.|.+.+++||.|++|+|++.....-.... ...+....|+|.+..+++|+|..|.|..+
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~------------~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~ 164 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYES------------GDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTK 164 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCccccccccc------------ccCccccCceEEecCCCcEEEEeeEEeccccCccccccc
Confidence 45566677777777777653210000000 00011357888888889999999998753
Q ss_pred --------CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccC-CCCCEEEEEEEceEEecCC
Q 015254 214 --------DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQ-NEQPVVGIRVRECNISNTS 267 (410)
Q Consensus 214 --------dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~-~~~~v~nv~i~n~~~~~~~ 267 (410)
|.++.++.++++|+|++|.|... .+.-+|+.-... ......+|+|.++.+.+..
T Consensus 165 ~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 165 DGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred cCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCc
Confidence 55567877789999999999754 366677642110 0112357999999997754
No 43
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.63 E-value=1.1e-06 Score=85.24 Aligned_cols=160 Identities=11% Similarity=0.123 Sum_probs=98.3
Q ss_pred eEEEEeeccEEEEeEEEeccC-cceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceE-EecC
Q 015254 144 NLSFNAITNSVVQDVTSLNSK-QFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCI-SIGD 221 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~-~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i-~i~s 221 (410)
.|.+..++||.|++++|+++. .+.-.+...+. ...-.. .....|||.+..+++|.|++|.|..+.|++ .++.
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~---~~~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSES---IGVEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETT---TEEEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccC---cccccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 577778899999999998752 11110100000 000001 125789999999999999999999877775 6766
Q ss_pred CceeEEEEeEEEcCC-ceEEEeecCccCCCCCEEEEEEEceEE-ecCCe-eEEEEecCCCCCcceeeEEEEeEEEecCC-
Q 015254 222 GTQQMEINKIDCGPG-HGISVGSLGKYQNEQPVVGIRVRECNI-SNTSN-GVRIKTWPASYPGTASDLHFEDIKMNNVS- 297 (410)
Q Consensus 222 ~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nv~i~n~~~-~~~~~-gi~iks~~g~~~g~v~nI~~~ni~~~~~~- 297 (410)
++++|+|++|.+..- .++-+|+..... .....+|+|.++.+ .+... ..+++ . ..+++.|..+.+..
T Consensus 181 ~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~~~R~Pr~r--~-------g~~hv~NN~~~~~~~ 250 (346)
T 1pxz_A 181 GSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNAGQRMPRAR--Y-------GLVHVANNNYDPWNI 250 (346)
T ss_dssp SCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSEEECTTEEE--S-------SEEEEESCEECCCSS
T ss_pred CcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCccccCccEe--c-------ceEEEEeeEEEcccc
Confidence 789999999999853 367787642110 11235889999998 55331 22332 1 24556666666544
Q ss_pred ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEE
Q 015254 298 NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIR 331 (410)
Q Consensus 298 ~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~ 331 (410)
+++.... .+...+|+=.|++-.
T Consensus 251 ~~i~~~~------------~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 251 YAIGGSS------------NPTILSEGNSFTAPS 272 (346)
T ss_dssp CSEEEES------------CCEEEEESCEEECCS
T ss_pred eEEeccC------------CceEEEECCEEECCC
Confidence 5655432 234567777776643
No 44
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.57 E-value=1.5e-06 Score=84.50 Aligned_cols=86 Identities=20% Similarity=0.250 Sum_probs=56.1
Q ss_pred CeeeEEEEeEEEEC--CCCCCCCCceEeeccccEEEEeeEEec-CCceEEe-cCCceeEEEEeEEEcCC----------c
Q 015254 172 GAKNFTFQRVTVTA--PEESLNTDGIHVGRSSGVTITDSKIGT-GDDCISI-GDGTQQMEINKIDCGPG----------H 237 (410)
Q Consensus 172 ~~~nv~i~n~~i~~--~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i-~s~~~nv~I~n~~~~~~----------~ 237 (410)
.++||.|+|++|+. +......|+|.+..+++|+|++|.+.. +|..+.. +.++++|+|++|.|... |
T Consensus 131 ~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h 210 (359)
T 1idk_A 131 GAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYH 210 (359)
T ss_dssp TCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBB
T ss_pred CCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccc
Confidence 34455555555553 111235688999889999999999875 5666654 44578999999999631 1
Q ss_pred --eEEE-eecCccCCCCCEEEEEEEceEEecC
Q 015254 238 --GISV-GSLGKYQNEQPVVGIRVRECNISNT 266 (410)
Q Consensus 238 --Gi~i-gs~g~~~~~~~v~nv~i~n~~~~~~ 266 (410)
+..+ |+ -.+++|.++.+.+.
T Consensus 211 ~~~~~L~G~---------sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 211 YWAIYLDGD---------ADLVTMKGNYIYHT 233 (359)
T ss_dssp SCCEEECCS---------SCEEEEESCEEESB
T ss_pred cceEEEEec---------CCCeEEEceEeecC
Confidence 2333 21 13788999988764
No 45
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.53 E-value=1.8e-06 Score=83.21 Aligned_cols=119 Identities=15% Similarity=0.137 Sum_probs=68.3
Q ss_pred CCCceEee-----ccccEEEEeeEEecC------------CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccCCCCC
Q 015254 191 NTDGIHVG-----RSSGVTITDSKIGTG------------DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQNEQP 252 (410)
Q Consensus 191 n~DGi~~~-----~s~nv~I~n~~i~~g------------dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~~ 252 (410)
..|+|.+. .+++|+|+.|.|..+ |..+.++.++.+|+|++|.|.+- .++-+|+.-.... ..
T Consensus 112 ~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~-~~ 190 (330)
T 2qy1_A 112 DADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTK-NS 190 (330)
T ss_dssp GCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGG-GG
T ss_pred CCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCcccc-CC
Confidence 46777777 477777777777432 45567777788999999988643 2455665311100 11
Q ss_pred EEEEEEEceEEecCCe-eEEEEecCCCCCcceeeEEEEeEEEecC-CccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeE
Q 015254 253 VVGIRVRECNISNTSN-GVRIKTWPASYPGTASDLHFEDIKMNNV-SNPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNI 330 (410)
Q Consensus 253 v~nv~i~n~~~~~~~~-gi~iks~~g~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI 330 (410)
..+|+|.++.+.+... .-++. .| .+.+-|..+.+. .+++.... .+.+.+|+=.|++.
T Consensus 191 ~~~vT~h~N~f~~~~~R~Pr~r------~G---~~hv~NN~~~n~~~~~i~~~~------------~~~i~~e~N~F~~~ 249 (330)
T 2qy1_A 191 AARTTYHHNRFENVESRVPLQR------FG---LSHIYNNYFNNVTTSGINVRM------------GGIAKIESNYFENI 249 (330)
T ss_dssp GCEEEEESCEEEEEEECTTEEE------SS---EEEEESCEEEEECSCSEEEET------------TCEEEEESCEEEEE
T ss_pred CceEEEECcEEcCCCCCCCcee------cc---eEEEEeeEEEcccceEeccCC------------CcEEEEEccEEECC
Confidence 2578888888876431 12331 12 234444444443 24444322 24567788888876
Q ss_pred E
Q 015254 331 R 331 (410)
Q Consensus 331 ~ 331 (410)
.
T Consensus 250 ~ 250 (330)
T 2qy1_A 250 K 250 (330)
T ss_dssp E
T ss_pred C
Confidence 3
No 46
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.50 E-value=4.4e-06 Score=81.25 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=68.4
Q ss_pred CCCCceEeeccccEEEEeeEEec-CCceEE-ecCCceeEEEEeEEEcCC----------c--eEEE-eecCccCCCCCEE
Q 015254 190 LNTDGIHVGRSSGVTITDSKIGT-GDDCIS-IGDGTQQMEINKIDCGPG----------H--GISV-GSLGKYQNEQPVV 254 (410)
Q Consensus 190 ~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~-i~s~~~nv~I~n~~~~~~----------~--Gi~i-gs~g~~~~~~~v~ 254 (410)
...|+|.+..+++|+|++|.+.. +|..+. ...++.+|+|++|.|... | +..+ |+ -.
T Consensus 151 ~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~---------sd 221 (359)
T 1qcx_A 151 WGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGS---------ND 221 (359)
T ss_dssp TSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCS---------SE
T ss_pred ccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecC---------CC
Confidence 35689999889999999999875 444442 344688999999999631 2 3333 22 14
Q ss_pred EEEEEceEEecCCe-eEEEEecCCCCCcceeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeEEE
Q 015254 255 GIRVRECNISNTSN-GVRIKTWPASYPGTASDLHFEDIKMNNVS-NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNIRG 332 (410)
Q Consensus 255 nv~i~n~~~~~~~~-gi~iks~~g~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI~~ 332 (410)
+++|.++.+.+... .-+++. + ..+.+.|..+.+.. +++... ..+.+.+|+-.|++..-
T Consensus 222 ~vT~~~N~f~~~~~R~Pr~r~------~--~~~hv~NN~~~n~~~~a~~~~------------~~~~i~~e~N~F~~~~~ 281 (359)
T 1qcx_A 222 MVTLKGNYFYNLSGRMPKVQG------N--TLLHAVNNLFHNFDGHAFEIG------------TGGYVLAEGNVFQDVNV 281 (359)
T ss_dssp EEEEESCEEESBCSCTTEECS------S--EEEEEESCEEEEEEEEEEEEC------------TTEEEEEESCEEEEEEE
T ss_pred CeehcccEeccCcccCceecC------C--ceEEEEccEEECccCeEEecC------------CCceEEEEeeEEECCCc
Confidence 78899888876432 122210 0 12344444444322 333332 12456788888888764
Q ss_pred e
Q 015254 333 T 333 (410)
Q Consensus 333 ~ 333 (410)
.
T Consensus 282 ~ 282 (359)
T 1qcx_A 282 V 282 (359)
T ss_dssp E
T ss_pred c
Confidence 3
No 47
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.41 E-value=6.1e-06 Score=80.24 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=47.4
Q ss_pred eEEEEeeccEEEEeEEEeccCc--------------------ceEEEe-CeeeEEEEeEEEECCCCCCCCCceEeecccc
Q 015254 144 NLSFNAITNSVVQDVTSLNSKQ--------------------FHINVI-GAKNFTFQRVTVTAPEESLNTDGIHVGRSSG 202 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~~--------------------~~i~~~-~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~n 202 (410)
.+.+ ..++++++||+|+|+.. -++.+. ..+...+.+|++... .|.+......+
T Consensus 116 Tv~V-~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~-----QDTLy~~~~gr 189 (364)
T 3uw0_A 116 TVLV-NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGY-----QDTLYSKTGSR 189 (364)
T ss_dssp SEEE-CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECS-----BSCEEECTTCE
T ss_pred EEEE-ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEec-----ccceEeCCCCC
Confidence 3444 47889999999988742 124443 466677777777762 34454443455
Q ss_pred EEEEeeEEecCCceEEecCCceeEEEEeEEEc
Q 015254 203 VTITDSKIGTGDDCISIGDGTQQMEINKIDCG 234 (410)
Q Consensus 203 v~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~ 234 (410)
..+++|.|...-|-|.= . -...+++|++.
T Consensus 190 ~yf~~c~I~GtvDFIFG-~--a~a~f~~c~i~ 218 (364)
T 3uw0_A 190 SYFSDCEISGHVDFIFG-S--GITVFDNCNIV 218 (364)
T ss_dssp EEEESCEEEESEEEEEE-S--SEEEEESCEEE
T ss_pred EEEEcCEEEcCCCEECC-c--ceEEEEeeEEE
Confidence 66666666654443321 1 24566666653
No 48
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.38 E-value=1.7e-05 Score=75.91 Aligned_cols=208 Identities=18% Similarity=0.190 Sum_probs=120.2
Q ss_pred HHHHHHHHHhhcC-CCcEEEEcCceEEeeeeEecCCCCccEEEEEeeEEEeeCCccCccCCCccEEEEeeeeEEEEeCeE
Q 015254 40 ALRDAWKEACAAT-TPSKVLIPQGTYQLSPVTMEGPCKAAIELQVKGTLKALTDPANVKDAGSWVSFNKIEHLTVSGGGT 118 (410)
Q Consensus 40 aiq~Ai~~a~~~~-~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~ 118 (410)
.||+||++|.... .--+|+|++|+|. ..|.++. .|.+++|.++| .+...|.|.+.
T Consensus 21 TIq~AI~aap~~~~~~~~I~I~~G~Y~-E~V~I~~-~k~~Itl~G~g----------------------~~~tiI~~~~~ 76 (319)
T 1gq8_A 21 TVSEAVAAAPEDSKTRYVIRIKAGVYR-ENVDVPK-KKKNIMFLGDG----------------------RTSTIITASKN 76 (319)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE-CCEEECT-TCCSEEEEESC----------------------TTTEEEEECCC
T ss_pred CHHHHHHhccccCCceEEEEEcCCeEe-eeeeccC-CCccEEEEEcC----------------------CCccEEEeccc
Confidence 3999986533211 1139999999997 3455531 01356665543 02344444211
Q ss_pred ecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccC------cceEEEeCeeeEEEEeEEEECCCCCCCC
Q 015254 119 FDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSK------QFHINVIGAKNFTFQRVTVTAPEESLNT 192 (410)
Q Consensus 119 idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~------~~~i~~~~~~nv~i~n~~i~~~~~~~n~ 192 (410)
. ..+. .. .+.. .+.+ ..++++++|++|+|+. .-++.+ .++++.++||++.. ..
T Consensus 77 ~-~~g~----------~t-~~sa--tv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~Q 135 (319)
T 1gq8_A 77 V-QDGS----------TT-FNSA--TVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQ 135 (319)
T ss_dssp T-TTTC----------CT-GGGC--SEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----ST
T ss_pred c-cCCC----------Cc-cceE--EEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cc
Confidence 0 0010 00 1122 3555 4889999999999963 234555 57889999999997 45
Q ss_pred CceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcC-----CceEEEeecCccCCCCCEEEEEEEceEEecCC
Q 015254 193 DGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGP-----GHGISVGSLGKYQNEQPVVGIRVRECNISNTS 267 (410)
Q Consensus 193 DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~-----~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~ 267 (410)
|++.....+ ..+++|.|...-|-|. +. ....+++|++.. +..-.|-..++ .+...-....|.||++....
T Consensus 136 DTLy~~~~r-~~~~~c~I~G~vDFIf-G~--~~a~f~~c~i~~~~~~~~~~~~itA~~r-~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 136 DSLYVHSNR-QFFINCFIAGTVDFIF-GN--AAVVLQDCDIHARRPGSGQKNMVTAQGR-TDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp TCEEECSSE-EEEESCEEEESSSCEE-ES--CEEEEESCEEEECCCSTTCCEEEEEECC-CSTTCCCEEEEESCEEEECT
T ss_pred eeeeecCcc-EEEEecEEEeeeeEEe-cC--CcEEEEeeEEEEecCCCCCceEEEeCCC-CCCCCCceEEEECCEEecCC
Confidence 667776654 5899999987666654 22 368899998853 11112211111 12345567889999998654
Q ss_pred eeE----EEEecCCCCCcceeeEEEEeEEEecCC
Q 015254 268 NGV----RIKTWPASYPGTASDLHFEDIKMNNVS 297 (410)
Q Consensus 268 ~gi----~iks~~g~~~g~v~nI~~~ni~~~~~~ 297 (410)
... ..+.+-|+....-..+.|.+..|.+.-
T Consensus 211 ~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I 244 (319)
T 1gq8_A 211 DLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVI 244 (319)
T ss_dssp TTGGGGGGSCEEEECCSSTTCEEEEESCEECTTB
T ss_pred CccccccceeEEecccCCCcceEEEEeccCCCcc
Confidence 210 001122332344567888888887653
No 49
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.34 E-value=2.3e-05 Score=75.02 Aligned_cols=133 Identities=16% Similarity=0.160 Sum_probs=81.7
Q ss_pred eeEEEEeEEEECCCCCCCCCceEeec-cccEEEEeeEEec----------CCceEEecCCceeEEEEeEEEcCC-ceEEE
Q 015254 174 KNFTFQRVTVTAPEESLNTDGIHVGR-SSGVTITDSKIGT----------GDDCISIGDGTQQMEINKIDCGPG-HGISV 241 (410)
Q Consensus 174 ~nv~i~n~~i~~~~~~~n~DGi~~~~-s~nv~I~n~~i~~----------gdD~i~i~s~~~nv~I~n~~~~~~-~Gi~i 241 (410)
+||.|+|++|+... ....|+|.+.. +++|+|+.|.|.. .|..+.++.++.+|+|++|.|..- .+.-+
T Consensus 103 ~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~Li 181 (326)
T 3vmv_A 103 HNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLV 181 (326)
T ss_dssp EEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEE
T ss_pred ceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEE
Confidence 34444444444322 24678888886 8889999998852 366788888899999999999752 36777
Q ss_pred eecCccCCCCCEEEEEEEceEEecCCe-eEEEEecCCCCCcceeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCc
Q 015254 242 GSLGKYQNEQPVVGIRVRECNISNTSN-GVRIKTWPASYPGTASDLHFEDIKMNNVS-NPILLDQVYCPHNQCNAKVPSR 319 (410)
Q Consensus 242 gs~g~~~~~~~v~nv~i~n~~~~~~~~-gi~iks~~g~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~ 319 (410)
|+.-.. ...-.+|+|.++.+.+... .-++. . | .+.+-|..+.+.. +++.... .+.
T Consensus 182 G~sd~~--~~~~~~vT~~~N~f~~~~~R~Pr~r--~----G---~~Hv~NN~~~n~~~~~~~~~~------------~a~ 238 (326)
T 3vmv_A 182 GHTDNA--SLAPDKITYHHNYFNNLNSRVPLIR--Y----A---DVHMFNNYFKDINDTAINSRV------------GAR 238 (326)
T ss_dssp CSSSCG--GGCCEEEEEESCEEEEEEECTTEEE--S----C---EEEEESCEEEEESSCSEEEET------------TCE
T ss_pred CCCCCC--cccCccEEEEeeEecCCcCcCCccc--C----C---cEEEEccEEECCCceEEeecC------------CcE
Confidence 763111 0112579999998876321 22332 1 1 2444455544432 4554432 345
Q ss_pred eeEEeEEEEeE
Q 015254 320 VKLDRVSFKNI 330 (410)
Q Consensus 320 ~~i~nVtf~nI 330 (410)
+.+|+=.|++.
T Consensus 239 v~~e~N~F~~~ 249 (326)
T 3vmv_A 239 VFVENNYFDNV 249 (326)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEceEEECC
Confidence 78999999988
No 50
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.34 E-value=1.4e-05 Score=76.40 Aligned_cols=208 Identities=19% Similarity=0.195 Sum_probs=118.9
Q ss_pred HHHHHHHHHhhcC-CCcEEEEcCceEEeeeeEecCCCCccEEEEEeeEEEeeCCccCccCCCccEEEEeeeeEEEEeCeE
Q 015254 40 ALRDAWKEACAAT-TPSKVLIPQGTYQLSPVTMEGPCKAAIELQVKGTLKALTDPANVKDAGSWVSFNKIEHLTVSGGGT 118 (410)
Q Consensus 40 aiq~Ai~~a~~~~-~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~ 118 (410)
.||+||++|.... .--+|+|++|+|. ..+.++. .|.+++|.++| .+...|.|.+.
T Consensus 17 TIq~AI~aap~~~~~~~~I~I~~G~Y~-E~V~I~~-~k~~Itl~G~g----------------------~~~tiI~~~~~ 72 (317)
T 1xg2_A 17 TLAEAVAAAPDKSKTRYVIYVKRGTYK-ENVEVAS-NKMNLMIVGDG----------------------MYATTITGSLN 72 (317)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE-CCEEECT-TSCSEEEEESC----------------------TTTEEEEECCC
T ss_pred cHHHHHhhcccCCCceEEEEEcCCEEe-eeeecCC-CCCcEEEEEcC----------------------CCCcEEEeccc
Confidence 3999986533211 1129999999997 3455531 01456666543 02344444211
Q ss_pred ecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccC------cceEEEeCeeeEEEEeEEEECCCCCCCC
Q 015254 119 FDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSK------QFHINVIGAKNFTFQRVTVTAPEESLNT 192 (410)
Q Consensus 119 idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~------~~~i~~~~~~nv~i~n~~i~~~~~~~n~ 192 (410)
. ..|. .. .+.. .+.+ ..++++++|++|+|+. .-++.+ .++++.++||++.. ..
T Consensus 73 ~-~~g~----------~t-~~sa--tv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~Q 131 (317)
T 1xg2_A 73 V-VDGS----------TT-FRSA--TLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQ 131 (317)
T ss_dssp T-TTTC----------CS-GGGC--SEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----ST
T ss_pred c-cCCC----------cc-ccee--EEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cc
Confidence 0 0010 00 1122 3555 5899999999999863 234555 57889999999997 45
Q ss_pred CceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcC-----CceEEEeecCccCCCCCEEEEEEEceEEecCC
Q 015254 193 DGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGP-----GHGISVGSLGKYQNEQPVVGIRVRECNISNTS 267 (410)
Q Consensus 193 DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~-----~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~ 267 (410)
|.+.....+ -.+++|.|...-|-|. +. ....+++|++.. +..-.|-..++ .+........|.||++....
T Consensus 132 DTLy~~~~r-~~~~~c~I~G~vDFIf-G~--~~avf~~c~i~~~~~~~~~~~~itA~~r-~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 132 DTLYAHSQR-QFYRDSYVTGTVDFIF-GN--AAVVFQKCQLVARKPGKYQQNMVTAQGR-TDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp TCEEECSSE-EEEESCEEEESSSCEE-EC--CEEEEESCEEEECCCSTTCCEEEEEECC-CCTTSCCEEEEESCEEEECT
T ss_pred cceeecCcc-EEEEeeEEEeceeEEc-CC--ceEEEeeeEEEEeccCCCCccEEEecCc-CCCCCCcEEEEECCEEecCC
Confidence 667666544 4889999987666553 22 358889998853 11112211111 12345567889999998654
Q ss_pred eeE----EEEecCCCCCcceeeEEEEeEEEecCC
Q 015254 268 NGV----RIKTWPASYPGTASDLHFEDIKMNNVS 297 (410)
Q Consensus 268 ~gi----~iks~~g~~~g~v~nI~~~ni~~~~~~ 297 (410)
... ..+.+-|+....-..+.|.+..|.+.-
T Consensus 207 ~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I 240 (317)
T 1xg2_A 207 DLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLI 240 (317)
T ss_dssp TTGGGTTTSCEEEECCSSTTCEEEEESCEECTTB
T ss_pred CccccccceeEEeecccCCCceEEEEecccCCcc
Confidence 210 001122222344567888888887653
No 51
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.26 E-value=1.1e-05 Score=79.37 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=55.1
Q ss_pred CCCceEeeccccEEEEeeEEecC------------------CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccCCCC
Q 015254 191 NTDGIHVGRSSGVTITDSKIGTG------------------DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQNEQ 251 (410)
Q Consensus 191 n~DGi~~~~s~nv~I~n~~i~~g------------------dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~ 251 (410)
..|+|.+..++||+|..|.|..+ |..+.++.++.+|+|++|.|..- .+.-||+.-......
T Consensus 182 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 261 (399)
T 2o04_A 182 QYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDD 261 (399)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGT
T ss_pred CCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCcccc
Confidence 56889998899999999999854 66778888889999999999753 356677641111111
Q ss_pred CEEEEEEEceEEecC
Q 015254 252 PVVGIRVRECNISNT 266 (410)
Q Consensus 252 ~v~nv~i~n~~~~~~ 266 (410)
...+|+|.++.+.+.
T Consensus 262 g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 262 GKLKITLHHNRYKNI 276 (399)
T ss_dssp TCCCEEEESCEEEEE
T ss_pred CceeEEEECcEecCC
Confidence 234789999998764
No 52
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.25 E-value=7.2e-05 Score=71.87 Aligned_cols=154 Identities=14% Similarity=0.054 Sum_probs=105.2
Q ss_pred eeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEecc-----------CcceEEEeCeeeEE
Q 015254 109 EHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNS-----------KQFHINVIGAKNFT 177 (410)
Q Consensus 109 ~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns-----------~~~~i~~~~~~nv~ 177 (410)
..+.|.-.=+|+|++.. - .. -. .|.+.+++||.|++++|++. ..++|.+..++|+.
T Consensus 62 ~~l~v~snkTI~G~ga~-~--I~--------G~--Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVW 128 (340)
T 3zsc_A 62 REIKVLSDKTIVGINDA-K--IV--------GG--GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIW 128 (340)
T ss_dssp EEEEECSSEEEEEEEEE-E--EE--------EE--EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEE
T ss_pred ceEEecCCCEEEeccCc-E--Ee--------cC--ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEE
Confidence 46777544588887654 1 00 12 68888899999999999875 34679999999999
Q ss_pred EEeEEEECCCCCCCCCc-eEee-ccccEEEEeeEEecCCceEEecCCc----------eeEEEEeEEEcCCc----eEEE
Q 015254 178 FQRVTVTAPEESLNTDG-IHVG-RSSGVTITDSKIGTGDDCISIGDGT----------QQMEINKIDCGPGH----GISV 241 (410)
Q Consensus 178 i~n~~i~~~~~~~n~DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~s~~----------~nv~I~n~~~~~~~----Gi~i 241 (410)
|++|.+... .|| +++. .+++|+|.+|.|...+-+.-++... .+|++.++.+.+.. -++.
T Consensus 129 IDHcs~s~~-----~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~ 203 (340)
T 3zsc_A 129 IDHITFVNG-----NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF 203 (340)
T ss_dssp EESCEEESC-----SSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEES
T ss_pred EEeeeeccC-----CccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccC
Confidence 999999973 455 6776 4899999999999765555554421 37999999886432 1321
Q ss_pred eecCccCCCCCEEEEEEEceEEecC---------CeeEEEEecCCCCCcceeeEEEEeEEEecCCc
Q 015254 242 GSLGKYQNEQPVVGIRVRECNISNT---------SNGVRIKTWPASYPGTASDLHFEDIKMNNVSN 298 (410)
Q Consensus 242 gs~g~~~~~~~v~nv~i~n~~~~~~---------~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~ 298 (410)
-.+++.|+.+.+. -.+-.+.... -..|.+|+..+++...
T Consensus 204 ------------G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~------~a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 204 ------------GMAHVFNNFYSMGLRTGVSGNVFPIYGVASAM------GAKVHVEGNYFMGYGA 251 (340)
T ss_dssp ------------SEEEEESCEEECCCCCSCSSCCSCCEEEEEET------TCEEEEESCEEECSCH
T ss_pred ------------CeEEEEccEEECCccccccccceeeeeEecCC------CCEEEEECcEEECCCc
Confidence 1468889999881 0112222222 2467788888887766
No 53
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.24 E-value=1.9e-05 Score=76.66 Aligned_cols=76 Identities=13% Similarity=0.210 Sum_probs=55.4
Q ss_pred CCCceEeec-cccEEEEeeEEecC------------------CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccC-C
Q 015254 191 NTDGIHVGR-SSGVTITDSKIGTG------------------DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQ-N 249 (410)
Q Consensus 191 n~DGi~~~~-s~nv~I~n~~i~~g------------------dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~-~ 249 (410)
..|+|.+.. +++|+|..|.|..+ |.++.++.++.+|+|++|.|..- .++-+|+...+. .
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~ 221 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQ 221 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHH
T ss_pred CCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCccc
Confidence 578899998 99999999999853 66788988899999999999752 356677531100 0
Q ss_pred CCCEEEEEEEceEEecC
Q 015254 250 EQPVVGIRVRECNISNT 266 (410)
Q Consensus 250 ~~~v~nv~i~n~~~~~~ 266 (410)
...-.+|+|.++.+.+.
T Consensus 222 d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 222 DKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp HTTCCEEEEESCEEEEE
T ss_pred ccCcceEEEECeEEcCc
Confidence 01234799999999764
No 54
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.23 E-value=2.1e-05 Score=76.17 Aligned_cols=133 Identities=12% Similarity=0.100 Sum_probs=81.0
Q ss_pred ccEEEEeEE----EeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEEecCCceeE
Q 015254 151 TNSVVQDVT----SLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQM 226 (410)
Q Consensus 151 ~nv~I~~i~----i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv 226 (410)
++++|.+.. |.. ...++.+..++||.|+|++|+......+++ |......+. ...-....|+|.+.. ++||
T Consensus 88 sn~TI~G~ga~~~i~G-~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~-I~~~~~~~~---g~~~~~~~DaI~i~~-s~nV 161 (346)
T 1pxz_A 88 GHKTIDGRGADVHLGN-GGPCLFMRKVSHVILHSLHIHGCNTSVLGD-VLVSESIGV---EPVHAQDGDAITMRN-VTNA 161 (346)
T ss_dssp SSEEEECTTSCEEEET-TSCCEEEESCEEEEEESCEEECCCCCCSEE-EEEETTTEE---EEECCCCCCSEEEES-CEEE
T ss_pred CCeEEEccCCceEEeC-CcceEEEEccCCEEEEeeEEEeeccCCCce-EEeccCccc---ccccCCCCCEEEEec-CceE
Confidence 466666632 211 125788888999999999998742111100 100000000 011224678999985 7999
Q ss_pred EEEeEEEcCC-ceE-EEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEE-ecCC
Q 015254 227 EINKIDCGPG-HGI-SVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKM-NNVS 297 (410)
Q Consensus 227 ~I~n~~~~~~-~Gi-~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~-~~~~ 297 (410)
-|.+|++..+ +|+ .+. ....+|+|+||.|.+...++.+.+..........+|+|.+..+ ++..
T Consensus 162 wIDHcs~s~~~Dg~id~~--------~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~ 227 (346)
T 1pxz_A 162 WIDHNSLSDCSDGLIDVT--------LGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAG 227 (346)
T ss_dssp EEESCEEECCSSEEEEEE--------SSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEE
T ss_pred EEEeeEEecCCCCcEeec--------cCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCcc
Confidence 9999999875 564 552 2358999999999987777777543321112235788888888 5543
No 55
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.20 E-value=2.4e-05 Score=75.87 Aligned_cols=160 Identities=11% Similarity=0.104 Sum_probs=98.6
Q ss_pred EEEEe-eccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCC-CCCCCceEeeccccEEEEeeEEecC---------
Q 015254 145 LSFNA-ITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEE-SLNTDGIHVGRSSGVTITDSKIGTG--------- 213 (410)
Q Consensus 145 i~~~~-~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~-~~n~DGi~~~~s~nv~I~n~~i~~g--------- 213 (410)
+.+.. ..|++|.+.+- .....++.+..++||.|+|++|+..+. ....|+|.+..+++|+|+.|.|..+
T Consensus 82 ~~i~~~~sn~TI~G~~~-~~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~ 160 (353)
T 1air_A 82 VEIKEFTKGITIIGANG-SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPD 160 (353)
T ss_dssp EEEESBCSCEEEEECTT-CCBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGG
T ss_pred eEEEecCCCEEEEeccC-CCCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccc
Confidence 44433 34566655421 112346777777888888888885421 2467999999999999999999743
Q ss_pred -----CceEEecCCceeEEEEeEEEcCCc-eEEEeecCccCCCCCEEEEEEEceEEecCC-eeEEEEecCCCCCcceeeE
Q 015254 214 -----DDCISIGDGTQQMEINKIDCGPGH-GISVGSLGKYQNEQPVVGIRVRECNISNTS-NGVRIKTWPASYPGTASDL 286 (410)
Q Consensus 214 -----dD~i~i~s~~~nv~I~n~~~~~~~-Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~iks~~g~~~g~v~nI 286 (410)
|..+.++.++.+|+|++|.|...+ +.-+|+.-. +.+ .+|+|.++.+.+.. +..++. . | .+
T Consensus 161 ~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~--~~g--~~vT~hhN~f~~~~~R~Pr~r--~----G---~~ 227 (353)
T 1air_A 161 NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS--DTG--RNITYHHNYYNDVNARLPLQR--G----G---LV 227 (353)
T ss_dssp GCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTT--CCC--CEEEEESCEEEEEEECSCEEE--S----S---EE
T ss_pred cccccccceeeecccCcEEEEeeEEcCCCceeEECCCcC--CCC--ceEEEEceEEcCCcCCCCCCc--C----c---eE
Confidence 446778777899999999997543 455665411 112 68999999997643 122331 1 2 23
Q ss_pred EEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceeEEeEEEEeE
Q 015254 287 HFEDIKMNNVS-NPILLDQVYCPHNQCNAKVPSRVKLDRVSFKNI 330 (410)
Q Consensus 287 ~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nVtf~nI 330 (410)
.+-|..+.+.. +++.... .+.+.+|+=.|++.
T Consensus 228 Hv~NN~~~n~~~~~~~~~~------------~~~i~~e~N~F~~~ 260 (353)
T 1air_A 228 HAYNNLYTNITGSGLNVRQ------------NGQALIENNWFEKA 260 (353)
T ss_dssp EEESCEEEEESSCSEEEET------------TCEEEEESCEEEEE
T ss_pred EEEccEEECCCCceeccCC------------CcEEEEEceEEECC
Confidence 34444444332 3443321 24567888888876
No 56
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.11 E-value=0.00022 Score=69.50 Aligned_cols=132 Identities=13% Similarity=0.165 Sum_probs=100.0
Q ss_pred ccEEEEeEEEecc-----C------cceEEEeC-eeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEE
Q 015254 151 TNSVVQDVTSLNS-----K------QFHINVIG-AKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCIS 218 (410)
Q Consensus 151 ~nv~I~~i~i~ns-----~------~~~i~~~~-~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 218 (410)
++|+|++++|++. . .-+|.+.. .+++.|+++.+.. +.-||.+..+++.+|+++.|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 6677777777665 3 24788885 8889999999998 5668999999999999999997778999
Q ss_pred ecCCceeEEEEeEEEcCC---ceEEEeecCccCCCCCEEEEEEEceEE-ecCCeeEEEEecCCCCCcceeeEEEEeEEEe
Q 015254 219 IGDGTQQMEINKIDCGPG---HGISVGSLGKYQNEQPVVGIRVRECNI-SNTSNGVRIKTWPASYPGTASDLHFEDIKMN 294 (410)
Q Consensus 219 i~s~~~nv~I~n~~~~~~---~Gi~igs~g~~~~~~~v~nv~i~n~~~-~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~ 294 (410)
+...++...|+++.+..+ +||.+- ...+.+|+++.+ .+.++|+++... .+-.|++.+++
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~s--------~~~~i~~N~f~ 273 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTGC--------NRCSVTSNRLQ 273 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEESC--------BSCEEESCEEE
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEcc--------CCCEEECCEEe
Confidence 988778999999999764 346662 357788999977 558899988433 34456666666
Q ss_pred cCCccEEEEe
Q 015254 295 NVSNPILLDQ 304 (410)
Q Consensus 295 ~~~~~i~i~~ 304 (410)
+..+++.+..
T Consensus 274 ~~~~Gi~~M~ 283 (410)
T 2inu_A 274 GFYPGMLRLL 283 (410)
T ss_dssp ESSSCSEEEE
T ss_pred cceeEEEEEE
Confidence 6666555543
No 57
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.06 E-value=0.0025 Score=59.00 Aligned_cols=191 Identities=17% Similarity=0.225 Sum_probs=119.5
Q ss_pred cceeeEeecCCCcCC--chhHHHHHHHHHHHhhcCCCcEEEEcCceEEeeeeEecCCCCccEEEEEe--eEEEeeCCccC
Q 015254 20 AALDVDVTKHGAKQN--ADISQALRDAWKEACAATTPSKVLIPQGTYQLSPVTMEGPCKAAIELQVK--GTLKALTDPAN 95 (410)
Q Consensus 20 ~~~~~~v~d~Ga~gd--tDdt~aiq~Ai~~a~~~~~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~--G~i~~~~~~~~ 95 (410)
.|+++.+++|||.+| +||+++|.+.|.. ...|++|.|+|..+-+.+ +...|+.. |+|+.-...
T Consensus 61 darvls~k~fga~~~~~~d~~~~~~~sl~s------~~~v~i~~gvf~ss~i~~-----~~c~l~g~g~g~~~~~~~~-- 127 (542)
T 2x3h_A 61 DARVLTSKPFGAAGDATTDDTEVIAASLNS------QKAVTISDGVFSSSGINS-----NYCNLDGRGSGVLSHRSST-- 127 (542)
T ss_dssp HHHBCBSSCTTCCCBSSSCCHHHHHHHHTS------SSCEECCSEEEEECCEEE-----SCCEEECTTTEEEEECSSS--
T ss_pred hheeeecccccccCCcccCcHHHHHhhhcc------cccEeccccccccccccc-----ccccccccCCceeeeecCC--
Confidence 477899999999999 9999999988753 258999999998877776 46777775 677652222
Q ss_pred ccCCCccEEEE-----eeeeEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEEeeccEEEEeEEEeccCcceEEE
Q 015254 96 VKDAGSWVSFN-----KIEHLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFNAITNSVVQDVTSLNSKQFHINV 170 (410)
Q Consensus 96 ~~~~~~~i~~~-----~~~nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~~~~nv~I~~i~i~ns~~~~i~~ 170 (410)
+..+.|. -.++++|.|. ... . . ...+ .+.|..-.+++++++.+.|...-++.+
T Consensus 128 ----gn~lvfn~p~~g~ls~~ti~~n------k~~--------d-s-~qg~--qvs~~gg~dvsv~~i~fsn~~g~gfsl 185 (542)
T 2x3h_A 128 ----GNYLVFNNPRTGRLSNITVESN------KAT--------D-T-TQGQ--QVSLAGGSDVTVSDVNFSNVKGTGFSL 185 (542)
T ss_dssp ----SCCEEEESCEEEEEEEEEEECC------CSS--------T-T-CBCC--SEEEESCEEEEEEEEEEEEECSBEEEE
T ss_pred ----CCEEEEeCCCCcceeeEEEecc------cCC--------c-c-ccce--EEEecCCCcceEeeeeeeecCCCceeE
Confidence 3334333 3567777772 111 0 0 1123 688888999999999998865544332
Q ss_pred eC------eeeEEEEeEEEECCCCCCC-CCc-eEeeccccEEEEeeEEec--CCceEEecCCceeEEEEeEEEcC-CceE
Q 015254 171 IG------AKNFTFQRVTVTAPEESLN-TDG-IHVGRSSGVTITDSKIGT--GDDCISIGDGTQQMEINKIDCGP-GHGI 239 (410)
Q Consensus 171 ~~------~~nv~i~n~~i~~~~~~~n-~DG-i~~~~s~nv~I~n~~i~~--gdD~i~i~s~~~nv~I~n~~~~~-~~Gi 239 (410)
.. -+...|++++=.-.....| .-| +-..++.|-.|.++..++ +-.++.+|...+.-.+.|..-.. .|-.
T Consensus 186 iayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~ 265 (542)
T 2x3h_A 186 IAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVT 265 (542)
T ss_dssp EEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEE
T ss_pred EEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEE
Confidence 21 2456677776665444333 223 334568888888888877 34567776643333333332222 2334
Q ss_pred EEeecC
Q 015254 240 SVGSLG 245 (410)
Q Consensus 240 ~igs~g 245 (410)
.-|.++
T Consensus 266 yngte~ 271 (542)
T 2x3h_A 266 YNGTEG 271 (542)
T ss_dssp EEECSS
T ss_pred ECCccC
Confidence 445554
No 58
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.03 E-value=2.6e-05 Score=77.05 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=72.4
Q ss_pred ceEEEeCeeeEEEEeEEEECCCC---------------CCCCCceEeeccccEEEEeeEEecC-----------------
Q 015254 166 FHINVIGAKNFTFQRVTVTAPEE---------------SLNTDGIHVGRSSGVTITDSKIGTG----------------- 213 (410)
Q Consensus 166 ~~i~~~~~~nv~i~n~~i~~~~~---------------~~n~DGi~~~~s~nv~I~n~~i~~g----------------- 213 (410)
.++.+..++||.|+|++|+...+ ....|+|.+..+++|+|..|.|..+
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceee
Confidence 35666677788888888875421 1356999999999999999999864
Q ss_pred -CceEEecCCceeEEEEeEEEcCC-ceEEEeecCccCCCCCEEEEEEEceEEecC
Q 015254 214 -DDCISIGDGTQQMEINKIDCGPG-HGISVGSLGKYQNEQPVVGIRVRECNISNT 266 (410)
Q Consensus 214 -dD~i~i~s~~~nv~I~n~~~~~~-~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~ 266 (410)
|.++.++.++.+|+|++|.|... .+.-||+.-.+.......+|+|.++.+.+.
T Consensus 228 ~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 228 HDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 66778888889999999999753 356677641111111234699999999764
No 59
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.90 E-value=0.00025 Score=68.88 Aligned_cols=156 Identities=14% Similarity=0.105 Sum_probs=99.7
Q ss_pred eEEEEeCeEecCCCCCCCcccccCCCCCCCCeeeeEEEE-eeccEEEEeEEEecc------CcceEEEeCeeeEEEEeEE
Q 015254 110 HLTVSGGGTFDGQGAVAPSECEKDDYCKKRPIVSNLSFN-AITNSVVQDVTSLNS------KQFHINVIGAKNFTFQRVT 182 (410)
Q Consensus 110 nv~I~G~G~idG~g~~~~~~~~~~~~~~~~p~~w~i~~~-~~~nv~I~~i~i~ns------~~~~i~~~~~~nv~i~n~~ 182 (410)
.+.|.-.=+|.|.|..-- -.-. .|.+. .++||.|++|+|++. ..++|.+..++++.|++|+
T Consensus 103 ~l~v~snkTI~G~G~~~~----------i~G~--gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs 170 (359)
T 1idk_A 103 GITVTSNKSLIGEGSSGA----------IKGK--GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVT 170 (359)
T ss_dssp CEEECSSEEEEECTTTCE----------EESC--CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCE
T ss_pred eEEeCCCceEEEecCCeE----------Eecc--eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeE
Confidence 466644458888765210 0112 57887 899999999999973 2367999999999999999
Q ss_pred EECCCCCCCCCceE---eeccccEEEEeeEEecCC---------c--eEEecCCceeEEEEeEEEcCCc--eEEEeecCc
Q 015254 183 VTAPEESLNTDGIH---VGRSSGVTITDSKIGTGD---------D--CISIGDGTQQMEINKIDCGPGH--GISVGSLGK 246 (410)
Q Consensus 183 i~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~gd---------D--~i~i~s~~~nv~I~n~~~~~~~--Gi~igs~g~ 246 (410)
+.... |+.. ...+++|+|.+|.|...+ + ...+...+.++++.++.+.+.. .=.+
T Consensus 171 ~s~~~-----d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~----- 240 (359)
T 1idk_A 171 TARIG-----RQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV----- 240 (359)
T ss_dssp EEEES-----SCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEE-----
T ss_pred eecCC-----CCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCccc-----
Confidence 98632 3332 346899999999997432 1 2333333568999999986421 1111
Q ss_pred cCCCCCEEEEEEEceEEecCC-eeEEEEecCCCCCcceeeEEEEeEEEecCCcc
Q 015254 247 YQNEQPVVGIRVRECNISNTS-NGVRIKTWPASYPGTASDLHFEDIKMNNVSNP 299 (410)
Q Consensus 247 ~~~~~~v~nv~i~n~~~~~~~-~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~~ 299 (410)
..-..+++.|+.+.+.. +++.. +.-..|.+|+..+++...|
T Consensus 241 ----r~g~~~hv~NN~~~n~~~~~i~~--------~~~~~i~~e~N~F~~~~~p 282 (359)
T 1idk_A 241 ----QDNTLLHAVNNYWYDISGHAFEI--------GEGGYVLAEGNVFQNVDTV 282 (359)
T ss_dssp ----CTTCEEEEESCEEEEEEEEEEEE--------CTTCEEEEESCEEEEEEEE
T ss_pred ----cCCceEEEECCEEecccceEEec--------cCCcEEEEEccEEECCCCc
Confidence 11135888888888742 34443 1124567777777665444
No 60
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.87 E-value=0.00055 Score=67.60 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=79.4
Q ss_pred eEEEEeeccEEEEeEEEecc-------------------CcceEEEeCeeeEEEEeEEEECCCCC------------CCC
Q 015254 144 NLSFNAITNSVVQDVTSLNS-------------------KQFHINVIGAKNFTFQRVTVTAPEES------------LNT 192 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~n~ 192 (410)
.|.+.+++||.|++|+|++. ..++|.+..++||.|++|++....+. .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 57888899999999999863 13579999999999999999964210 014
Q ss_pred Cc-eEee-ccccEEEEeeEEecCCceEEecCCc--------eeEEEEeEEEcCC--ceEEEeecCccCCCCCEEEEEEEc
Q 015254 193 DG-IHVG-RSSGVTITDSKIGTGDDCISIGDGT--------QQMEINKIDCGPG--HGISVGSLGKYQNEQPVVGIRVRE 260 (410)
Q Consensus 193 DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~s~~--------~nv~I~n~~~~~~--~Gi~igs~g~~~~~~~v~nv~i~n 260 (410)
|| +++. .+++|+|.+|.|...+-+.-+++.. -+|++.++.+.+. ..=.+. . -.+++.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R-------~---G~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVR-------F---GQVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEES-------S---CEEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCcccc-------c---ceEEEEc
Confidence 65 4555 5899999999998755444454421 2699999998532 111221 1 1388999
Q ss_pred eEEecC
Q 015254 261 CNISNT 266 (410)
Q Consensus 261 ~~~~~~ 266 (410)
+.+.+.
T Consensus 299 N~~~n~ 304 (416)
T 1vbl_A 299 NYYEFS 304 (416)
T ss_dssp CEEEEC
T ss_pred ceEECC
Confidence 999864
No 61
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.85 E-value=0.00073 Score=65.19 Aligned_cols=81 Identities=19% Similarity=0.186 Sum_probs=49.1
Q ss_pred eEEEEeeccEEEEeEEEeccCc------------------c--eEEE-eCeeeEEEEeEEEECCCCCCCCCceEeecccc
Q 015254 144 NLSFNAITNSVVQDVTSLNSKQ------------------F--HINV-IGAKNFTFQRVTVTAPEESLNTDGIHVGRSSG 202 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~~------------------~--~i~~-~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~n 202 (410)
.+.+ .+++++++||+|+|+.. . ++.+ ..++++.+++|.+.. ..|.+.... .+
T Consensus 90 tv~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~-gr 162 (342)
T 2nsp_A 90 TITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSG-GR 162 (342)
T ss_dssp SEEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECS-SE
T ss_pred EEEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECC-CC
Confidence 3555 47899999999998641 1 2321 356777777777776 334455443 35
Q ss_pred EEEEeeEEecCCceEEecCCceeEEEEeEEEc
Q 015254 203 VTITDSKIGTGDDCISIGDGTQQMEINKIDCG 234 (410)
Q Consensus 203 v~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~ 234 (410)
..+++|.|...-|-|. +. -...+++|++.
T Consensus 163 ~~~~~c~I~G~vDFIF-G~--a~a~f~~c~i~ 191 (342)
T 2nsp_A 163 SFFSDCRISGTVDFIF-GD--GTALFNNCDLV 191 (342)
T ss_dssp EEEESCEEEESEEEEE-ES--SEEEEESCEEE
T ss_pred EEEEcCEEEeceEEEe-CC--ceEEEecCEEE
Confidence 6777777775544332 22 24677777664
No 62
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.74 E-value=0.00051 Score=66.52 Aligned_cols=140 Identities=12% Similarity=0.033 Sum_probs=94.5
Q ss_pred eEEEEeeccEEEEeEEEeccC-----cceEEEeCeeeEEEEeEEEECCCCC--------CCCCce-Eee-ccccEEEEee
Q 015254 144 NLSFNAITNSVVQDVTSLNSK-----QFHINVIGAKNFTFQRVTVTAPEES--------LNTDGI-HVG-RSSGVTITDS 208 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~-----~~~i~~~~~~nv~i~n~~i~~~~~~--------~n~DGi-~~~-~s~nv~I~n~ 208 (410)
.|.+..++||.|++++|+..+ .++|.+..++||.|++|.+....+. ...||. ++. .+++|+|.+|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 678889999999999999754 3679999999999999999864211 113554 554 6899999999
Q ss_pred EEecCCceEEecCC----ceeEEEEeEEEcCC--ceEEEeecCccCCCCCEEEEEEEceEEecCC-eeEEEEecCCCCCc
Q 015254 209 KIGTGDDCISIGDG----TQQMEINKIDCGPG--HGISVGSLGKYQNEQPVVGIRVRECNISNTS-NGVRIKTWPASYPG 281 (410)
Q Consensus 209 ~i~~gdD~i~i~s~----~~nv~I~n~~~~~~--~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~iks~~g~~~g 281 (410)
.|...+-+..+++. ..+|++.++.+.+. ..-.+. .-.+++.|+.+.+.. +++.. ..
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n~~~~~~~~--~~----- 246 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQR----------GGLVHAYNNLYTNITGSGLNV--RQ----- 246 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEE----------SSEEEEESCEEEEESSCSEEE--ET-----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCc----------CceEEEEccEEECCCCceecc--CC-----
Confidence 99864333333331 15799999988532 111221 025788899988743 45543 11
Q ss_pred ceeeEEEEeEEEecCCccEE
Q 015254 282 TASDLHFEDIKMNNVSNPIL 301 (410)
Q Consensus 282 ~v~nI~~~ni~~~~~~~~i~ 301 (410)
-..|.+|+..+++...|+.
T Consensus 247 -~~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 247 -NGQALIENNWFEKAINPVT 265 (353)
T ss_dssp -TCEEEEESCEEEEEESSEE
T ss_pred -CcEEEEEceEEECCCCceE
Confidence 1356777777777666653
No 63
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.70 E-value=0.00063 Score=66.07 Aligned_cols=135 Identities=16% Similarity=0.086 Sum_probs=90.8
Q ss_pred eEEEE-eeccEEEEeEEEeccC------cceEEEeCeeeEEEEeEEEECCCCCCCCCceE---eeccccEEEEeeEEecC
Q 015254 144 NLSFN-AITNSVVQDVTSLNSK------QFHINVIGAKNFTFQRVTVTAPEESLNTDGIH---VGRSSGVTITDSKIGTG 213 (410)
Q Consensus 144 ~i~~~-~~~nv~I~~i~i~ns~------~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~g 213 (410)
.|.+. .++||.|++++|++.. ..+|.+..++++.|++|++... .|+.. ...+++|+|.+|.|...
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECB
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCC
Confidence 47777 8999999999999752 2678999999999999999863 33322 33689999999999743
Q ss_pred C---------c--eEEecCCceeEEEEeEEEcCCce--EEEeecCccCCCCCEEEEEEEceEEecCC-eeEEEEecCCCC
Q 015254 214 D---------D--CISIGDGTQQMEINKIDCGPGHG--ISVGSLGKYQNEQPVVGIRVRECNISNTS-NGVRIKTWPASY 279 (410)
Q Consensus 214 d---------D--~i~i~s~~~nv~I~n~~~~~~~G--i~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~iks~~g~~ 279 (410)
. + ..-+...+.++++.++.+.+..+ =.+ ..-..+++.|+.+.+.. +++..
T Consensus 200 ~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~---------r~~~~~hv~NN~~~n~~~~a~~~------- 263 (359)
T 1qcx_A 200 SDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKV---------QGNTLLHAVNNLFHNFDGHAFEI------- 263 (359)
T ss_dssp CSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEE---------CSSEEEEEESCEEEEEEEEEEEE-------
T ss_pred ccccccCcccccceeEEecCCCCeehcccEeccCcccCcee---------cCCceEEEEccEEECccCeEEec-------
Confidence 1 1 23332235789999998863211 111 11135889999988743 34432
Q ss_pred CcceeeEEEEeEEEecCCccE
Q 015254 280 PGTASDLHFEDIKMNNVSNPI 300 (410)
Q Consensus 280 ~g~v~nI~~~ni~~~~~~~~i 300 (410)
+.-..|.+|+..+++..+|+
T Consensus 264 -~~~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 264 -GTGGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp -CTTEEEEEESCEEEEEEEEE
T ss_pred -CCCceEEEEeeEEECCCccc
Confidence 22356788888888766553
No 64
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.60 E-value=0.00043 Score=68.35 Aligned_cols=110 Identities=11% Similarity=0.046 Sum_probs=83.4
Q ss_pred eEEEEeeccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeecc-ccEEEEeeEEecC---------
Q 015254 144 NLSFNAITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRS-SGVTITDSKIGTG--------- 213 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s-~nv~I~n~~i~~g--------- 213 (410)
.+.+ ..++++|++++|+++...+|.+.. .+.+|++++++.. ...||.+... .+.+|++|.++..
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 4555 678999999999998877999887 6789999999973 3348999864 4889999999753
Q ss_pred CceEEecCC-ceeEEEEeEEEcC--CceEEEeecCccCCCCCEEEEEEEceEEecCC
Q 015254 214 DDCISIGDG-TQQMEINKIDCGP--GHGISVGSLGKYQNEQPVVGIRVRECNISNTS 267 (410)
Q Consensus 214 dD~i~i~s~-~~nv~I~n~~~~~--~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~ 267 (410)
.|+++++.. .+..+|++|.++. ..|+.+- .....++|+||...+..
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~--------~~~~~v~i~nn~a~~Ng 231 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF--------DSPQKVVIENSWAFRNG 231 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECT--------TCCSCCEEESCEEESTT
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEE--------ecCCCEEEEeEEEECCc
Confidence 267887652 3688899999875 3577762 12245789999987654
No 65
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.52 E-value=0.00068 Score=65.13 Aligned_cols=140 Identities=14% Similarity=0.064 Sum_probs=95.0
Q ss_pred eEEEE-eeccEEEEeEEEeccC----cceEEEe-----CeeeEEEEeEEEECCCCC------CCCCc-eEee-ccccEEE
Q 015254 144 NLSFN-AITNSVVQDVTSLNSK----QFHINVI-----GAKNFTFQRVTVTAPEES------LNTDG-IHVG-RSSGVTI 205 (410)
Q Consensus 144 ~i~~~-~~~nv~I~~i~i~ns~----~~~i~~~-----~~~nv~i~n~~i~~~~~~------~n~DG-i~~~-~s~nv~I 205 (410)
.|.+. +++||.|++++|++.. .++|.+. .++||.|++|++....+. .-.|| +++. .+++|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57888 8999999999999864 4789999 599999999999743210 11244 4655 4899999
Q ss_pred EeeEEecCCceEEecCC-------ceeEEEEeEEEcCCc--eEEEeecCccCCCCCEEEEEEEceEEecC-CeeEEEEec
Q 015254 206 TDSKIGTGDDCISIGDG-------TQQMEINKIDCGPGH--GISVGSLGKYQNEQPVVGIRVRECNISNT-SNGVRIKTW 275 (410)
Q Consensus 206 ~n~~i~~gdD~i~i~s~-------~~nv~I~n~~~~~~~--Gi~igs~g~~~~~~~v~nv~i~n~~~~~~-~~gi~iks~ 275 (410)
.+|.|+..+-+.-+++. ..+|++.++.+.+.. .=.+. . -.+++.|+.+.+. .+++.. .
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r-------~---G~~hv~NN~~~n~~~~~i~~--~ 234 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR-------F---GLSHIYNNYFNNVTTSGINV--R 234 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE-------S---SEEEEESCEEEEECSCSEEE--E
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee-------c---ceEEEEeeEEEcccceEecc--C
Confidence 99999875444444442 158999999885421 11121 0 1478999998875 345543 1
Q ss_pred CCCCCcceeeEEEEeEEEecCCccEE
Q 015254 276 PASYPGTASDLHFEDIKMNNVSNPIL 301 (410)
Q Consensus 276 ~g~~~g~v~nI~~~ni~~~~~~~~i~ 301 (410)
. -..|.+|+..+++...|+.
T Consensus 235 ~------~~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 235 M------GGIAKIESNYFENIKNPVT 254 (330)
T ss_dssp T------TCEEEEESCEEEEEESSEE
T ss_pred C------CcEEEEEccEEECCCCcee
Confidence 1 1357777777777666643
No 66
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.47 E-value=0.0077 Score=57.49 Aligned_cols=135 Identities=12% Similarity=0.135 Sum_probs=91.6
Q ss_pred eEEEEeeccEEEEeEEEeccC---cceEEEeC-eeeEEEEeEEEECCC----CCCCCCce-Eee-ccccEEEEeeEEecC
Q 015254 144 NLSFNAITNSVVQDVTSLNSK---QFHINVIG-AKNFTFQRVTVTAPE----ESLNTDGI-HVG-RSSGVTITDSKIGTG 213 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~---~~~i~~~~-~~nv~i~n~~i~~~~----~~~n~DGi-~~~-~s~nv~I~n~~i~~g 213 (410)
.|.+.+++||.|++++|++.. .++|.+.. ++|+.|++|++.... +..-.||+ ++. .+++|+|.+|.|..-
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 577789999999999999864 56799997 999999999998421 11123554 664 489999999999875
Q ss_pred CceEEecCC------ceeEEEEeEEEcCC--ceEEEeecCccCCCCCEEEEEEEceEEecC-CeeEEEEecCCCCCccee
Q 015254 214 DDCISIGDG------TQQMEINKIDCGPG--HGISVGSLGKYQNEQPVVGIRVRECNISNT-SNGVRIKTWPASYPGTAS 284 (410)
Q Consensus 214 dD~i~i~s~------~~nv~I~n~~~~~~--~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~-~~gi~iks~~g~~~g~v~ 284 (410)
+-+.-+++. ..+|++.++.+.+. ..=.+. ...+++.|+.+.+. .+++.. ..+ .
T Consensus 176 ~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n~~~~~~~~--~~~------a 237 (326)
T 3vmv_A 176 WKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIR----------YADVHMFNNYFKDINDTAINS--RVG------A 237 (326)
T ss_dssp EECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEE----------SCEEEEESCEEEEESSCSEEE--ETT------C
T ss_pred ceEEEECCCCCCcccCccEEEEeeEecCCcCcCCccc----------CCcEEEEccEEECCCceEEee--cCC------c
Confidence 444555542 14799999988532 111111 01578999999875 356544 221 4
Q ss_pred eEEEEeEEEecC
Q 015254 285 DLHFEDIKMNNV 296 (410)
Q Consensus 285 nI~~~ni~~~~~ 296 (410)
.|.+|+..+++.
T Consensus 238 ~v~~e~N~F~~~ 249 (326)
T 3vmv_A 238 RVFVENNYFDNV 249 (326)
T ss_dssp EEEEESCEEEEE
T ss_pred EEEEEceEEECC
Confidence 566666666654
No 67
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=96.68 E-value=0.01 Score=57.51 Aligned_cols=112 Identities=18% Similarity=0.192 Sum_probs=77.8
Q ss_pred eEEE---EeeccEEEEeEEEeccC---------------cceEEEeC-eeeEEEEeEEEECCCCC------------CCC
Q 015254 144 NLSF---NAITNSVVQDVTSLNSK---------------QFHINVIG-AKNFTFQRVTVTAPEES------------LNT 192 (410)
Q Consensus 144 ~i~~---~~~~nv~I~~i~i~ns~---------------~~~i~~~~-~~nv~i~n~~i~~~~~~------------~n~ 192 (410)
.|.+ .+++||.|++|+|++.. .++|.+.. ++||.|++|++....+. .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 5777 68999999999998631 35799999 99999999999964210 014
Q ss_pred Cc-eEee-ccccEEEEeeEEecCCceEEecCCc---------eeEEEEeEEEcCC--ceEEEeecCccCCCCCEEEEEEE
Q 015254 193 DG-IHVG-RSSGVTITDSKIGTGDDCISIGDGT---------QQMEINKIDCGPG--HGISVGSLGKYQNEQPVVGIRVR 259 (410)
Q Consensus 193 DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~s~~---------~nv~I~n~~~~~~--~Gi~igs~g~~~~~~~v~nv~i~ 259 (410)
|| +++. .+++|+|.+|.|..-+-+.-+++.. -+|++.++.+.+. ..=.+ .. -.+++.
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~-------R~---G~~Hv~ 253 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV-------RY---GSIHSF 253 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE-------SS---CEEEEE
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccc-------cc---ceEEEE
Confidence 55 4565 5899999999998754444454421 2699999988532 11111 01 137889
Q ss_pred ceEEec
Q 015254 260 ECNISN 265 (410)
Q Consensus 260 n~~~~~ 265 (410)
|+.+.+
T Consensus 254 NN~~~~ 259 (361)
T 1pe9_A 254 NNVFKG 259 (361)
T ss_dssp SCEEEE
T ss_pred cceEec
Confidence 999864
No 68
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=96.49 E-value=0.021 Score=56.05 Aligned_cols=112 Identities=11% Similarity=0.141 Sum_probs=78.5
Q ss_pred eEEEEeeccEEEEeEEEecc-------------------CcceEEEeCeeeEEEEeEEEECCCCC------------CCC
Q 015254 144 NLSFNAITNSVVQDVTSLNS-------------------KQFHINVIGAKNFTFQRVTVTAPEES------------LNT 192 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~n~ 192 (410)
.|.+.. +||.|++|+|++. ..++|.+..++||.|++|++....+. .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 577877 9999999999863 23579999999999999999964210 014
Q ss_pred Cce-Eee-ccccEEEEeeEEecCCceEEecCC--------ceeEEEEeEEEcCC--ceEEEeecCccCCCCCEEEEEEEc
Q 015254 193 DGI-HVG-RSSGVTITDSKIGTGDDCISIGDG--------TQQMEINKIDCGPG--HGISVGSLGKYQNEQPVVGIRVRE 260 (410)
Q Consensus 193 DGi-~~~-~s~nv~I~n~~i~~gdD~i~i~s~--------~~nv~I~n~~~~~~--~Gi~igs~g~~~~~~~v~nv~i~n 260 (410)
||. ++. .+++|+|.+|.|...+-+.-+++. ..+|++.++.+.+. ..=.+. . -.+++.|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R-------~---G~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR-------F---GQVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES-------S---CEEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc-------c---ceEEEEc
Confidence 654 565 589999999999875544445442 13799999988532 111121 1 1388999
Q ss_pred eEEecC
Q 015254 261 CNISNT 266 (410)
Q Consensus 261 ~~~~~~ 266 (410)
+.+.+.
T Consensus 293 N~~~n~ 298 (399)
T 2o04_A 293 NYYEGS 298 (399)
T ss_dssp CEEECC
T ss_pred ceEECC
Confidence 999765
No 69
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.32 E-value=0.021 Score=55.19 Aligned_cols=116 Identities=12% Similarity=0.174 Sum_probs=71.3
Q ss_pred ceEEEeCeeeEEEEeEEEECCCCCC----CCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCc--e-
Q 015254 166 FHINVIGAKNFTFQRVTVTAPEESL----NTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGH--G- 238 (410)
Q Consensus 166 ~~i~~~~~~nv~i~n~~i~~~~~~~----n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~--G- 238 (410)
.++.+..++||.|+|++|+...+.. .+|| .....|+|.+.. ++||-|.+|++..+. .
T Consensus 96 ~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g---------------~~~~~DaI~i~~-s~nVWIDH~s~s~~~~~d~ 159 (355)
T 1pcl_A 96 GSLVIKGVKNVILRNLYIETPVDVAPHYESGDG---------------WNAEWDAAVIDN-STNVWVDHVTISDGSFTDD 159 (355)
T ss_pred CEEEEecCCeEEEeeeEEEcCcccccccccccC---------------ccccCceEEecC-CCcEEEEeeEEeccccCcc
Confidence 3566677899999999999753210 1233 123468898865 789999999998641 0
Q ss_pred ---EEEeec-----CccCCCCCEEEEEEEceEEecCCeeEEEEecCCCC--CcceeeEEEEeEEEecCC
Q 015254 239 ---ISVGSL-----GKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASY--PGTASDLHFEDIKMNNVS 297 (410)
Q Consensus 239 ---i~igs~-----g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~--~g~v~nI~~~ni~~~~~~ 297 (410)
..+|-. |.-.......+|+|++|.|.+...++-+.+..... .....+|||-+..+.+..
T Consensus 160 ~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 160 KYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred ccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCc
Confidence 111100 00000124589999999999987776665433210 012346888888887654
No 70
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.15 E-value=0.1 Score=51.09 Aligned_cols=45 Identities=20% Similarity=0.235 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhc--CCCcEEEEcCceEEeeeeEecCCCCccEEEEEee
Q 015254 39 QALRDAWKEACAA--TTPSKVLIPQGTYQLSPVTMEGPCKAAIELQVKG 85 (410)
Q Consensus 39 ~aiq~Ai~~a~~~--~~g~~v~~P~G~Y~i~~l~l~~~~~s~v~l~~~G 85 (410)
.-||+||+++... ..-.+|+|.+|+|.= .|.++. .|.+++|+++|
T Consensus 90 ~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E-~V~Ip~-~K~~ItL~G~G 136 (422)
T 3grh_A 90 TTIQAAVDAAIIKRTNKRQYIAVMPGEYQG-TVYVPA-APGGITLYGTG 136 (422)
T ss_dssp SSHHHHHHHHHTTCCSSCEEEEECSEEEES-CEEECC-CSSCEEEEECS
T ss_pred CCHHHHHHhchhcCCCccEEEEEeCCeEee-eEEecC-CCCcEEEEecc
Confidence 4588888765322 223689999999974 355531 12578887765
No 71
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.06 E-value=0.54 Score=40.63 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=51.2
Q ss_pred EEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEec-CCceEEecCCceeEEEEeEEEcCCce--EEEeecCccCCCCC
Q 015254 176 FTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGT-GDDCISIGDGTQQMEINKIDCGPGHG--ISVGSLGKYQNEQP 252 (410)
Q Consensus 176 v~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~s~~~nv~I~n~~~~~~~G--i~igs~g~~~~~~~ 252 (410)
.+++|+.|-. ...||||... +-+++|+.+.. +.|++.++. +..++|.+.-..++.. ++.-.
T Consensus 54 aTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~Ng--------- 117 (196)
T 3t9g_A 54 ANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLNA--------- 117 (196)
T ss_dssp CEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEECS---------
T ss_pred CEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEECC---------
Confidence 4445554433 2467777653 56677776654 677777774 3455555444433221 33311
Q ss_pred EEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCc
Q 015254 253 VVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSN 298 (410)
Q Consensus 253 v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~ 298 (410)
--.+.|+|.++.+ .|--..+..+. ..-++|.++|+++.+...
T Consensus 118 ~Gtv~I~nF~~~~--~GKl~RSCGnc--~~~r~v~i~~v~~~n~k~ 159 (196)
T 3t9g_A 118 PCTFKVKNFTATN--IGKLVRQNGNT--TFKVVIYLEDVTLNNVKS 159 (196)
T ss_dssp SEEEEEEEEEEEE--EEEEEEECTTC--CSCEEEEEEEEEEEEEEE
T ss_pred CceEEEeeEEEcc--CCEEEEcCCCC--CceeEEEEeCeEEeCCEE
Confidence 1235566666554 23222232211 233666666666666543
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.03 E-value=0.33 Score=41.98 Aligned_cols=133 Identities=15% Similarity=0.170 Sum_probs=94.4
Q ss_pred eccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEE
Q 015254 150 ITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEIN 229 (410)
Q Consensus 150 ~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~ 229 (410)
.++.+++|+.|-.....+||... +.+++|+.... --.|.+.+.++..++|.+.-.++.+|=|-=..+.-.+.|+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~G--~ctl~NVwwed----VcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 124 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCYG--DNVVENVVWED----VGEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVK 124 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEECS--SEEEEEEEESS----CCSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEECCCCcCcEEEcC--CEeEEEEEeee----eeceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEe
Confidence 45789999999777788999864 67899999887 3678888887778899999888877766555556678888
Q ss_pred eEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCc
Q 015254 230 KIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSN 298 (410)
Q Consensus 230 n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~ 298 (410)
|.+... .|--.-|.|. ...-++|.++|+++.+....+ +++.. .-..+++.|+++.++.+
T Consensus 125 nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS-----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 125 NFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDS-----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp EEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCC-----TTCEEEEEEEEEEEEEE
T ss_pred eEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCC-----CCCEEEEecceecCCCc
Confidence 887752 4544445552 234589999999998865443 33322 23556677777666543
No 73
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.95 E-value=0.16 Score=48.23 Aligned_cols=112 Identities=9% Similarity=0.114 Sum_probs=70.8
Q ss_pred CeeeEEEEeEEEECCCCC--CCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCC
Q 015254 172 GAKNFTFQRVTVTAPEES--LNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQN 249 (410)
Q Consensus 172 ~~~nv~i~n~~i~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~ 249 (410)
..++++++|++|.+.... ...-++.+ .++++.+.+|.|....|.+..+.+ + ..+++|++.+.-.+-+|.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~------ 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHSN-R-QFFINCFIAGTVDFIFGN------ 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECSS-E-EEEESCEEEESSSCEEES------
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecCc-c-EEEEecEEEeeeeEEecC------
Confidence 467899999999985432 23445555 468889999999988888888763 3 488899887554555553
Q ss_pred CCCEEEEEEEceEEecCCe----eEEEEecCCCCCcceeeEEEEeEEEecC
Q 015254 250 EQPVVGIRVRECNISNTSN----GVRIKTWPASYPGTASDLHFEDIKMNNV 296 (410)
Q Consensus 250 ~~~v~nv~i~n~~~~~~~~----gi~iks~~g~~~g~v~nI~~~ni~~~~~ 296 (410)
....|+||++..... .-.|..........-..+.|.|+++...
T Consensus 163 ----~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~ 209 (319)
T 1gq8_A 163 ----AAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGAT 209 (319)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEEC
T ss_pred ----CcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecC
Confidence 226788888875321 1122222111113445677788877654
No 74
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.60 E-value=0.17 Score=47.98 Aligned_cols=112 Identities=10% Similarity=0.113 Sum_probs=69.7
Q ss_pred CeeeEEEEeEEEECCCCC--CCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEEeEEEcCCceEEEeecCccCC
Q 015254 172 GAKNFTFQRVTVTAPEES--LNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCGPGHGISVGSLGKYQN 249 (410)
Q Consensus 172 ~~~nv~i~n~~i~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~~~~Gi~igs~g~~~~ 249 (410)
.+++++++|++|.+.... ...-++.+ .++++.+.+|.|....|.+..+.+ ++ .+++|++.+.-.+-+|.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~-r~-~~~~c~I~G~vDFIfG~------ 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQ-RQ-FYRDSYVTGTVDFIFGN------ 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSS-EE-EEESCEEEESSSCEEEC------
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCc-cE-EEEeeEEEeceeEEcCC------
Confidence 567899999999886432 23445555 468888999999887788877763 33 88888887554555553
Q ss_pred CCCEEEEEEEceEEecCCe----eEEEEecCCCCCcceeeEEEEeEEEecC
Q 015254 250 EQPVVGIRVRECNISNTSN----GVRIKTWPASYPGTASDLHFEDIKMNNV 296 (410)
Q Consensus 250 ~~~v~nv~i~n~~~~~~~~----gi~iks~~g~~~g~v~nI~~~ni~~~~~ 296 (410)
....|+||++..... .-.|..........-....|.|+++...
T Consensus 159 ----~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 159 ----AAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEEC
T ss_pred ----ceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecC
Confidence 226788888865321 1122222111113445677777777653
No 75
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=95.46 E-value=0.092 Score=51.48 Aligned_cols=78 Identities=12% Similarity=0.038 Sum_probs=54.2
Q ss_pred eeEEEEeeccEEEE-eEEEeccCcceEEEeCeeeEEEEeEEEECCCCCC-CCCceEe------eccccEEEEeeEEecCC
Q 015254 143 SNLSFNAITNSVVQ-DVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESL-NTDGIHV------GRSSGVTITDSKIGTGD 214 (410)
Q Consensus 143 w~i~~~~~~nv~I~-~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~-n~DGi~~------~~s~nv~I~n~~i~~gd 214 (410)
|.+++..|++++++ +|.+. ++|+||.|.||+|...++.- -.-|.-. .+|+++. +
T Consensus 196 WTIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------h 257 (514)
T 2vbk_A 196 WHSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------S 257 (514)
T ss_dssp EEEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------C
T ss_pred EEEeEeccCceecccCcccc---------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------c
Confidence 78999999999987 66653 48999999999999866521 1112211 2366665 4
Q ss_pred ceEEecCC-----cee-EEEEeEEEcCCce
Q 015254 215 DCISIGDG-----TQQ-MEINKIDCGPGHG 238 (410)
Q Consensus 215 D~i~i~s~-----~~n-v~I~n~~~~~~~G 238 (410)
.+|.++|. .+| |+|++|.+.+.+-
T Consensus 258 gav~igSE~m~~Gvk~~v~v~~Clf~~td~ 287 (514)
T 2vbk_A 258 EAIILDSETMCIGFKNAVYVHDCLDLHMEQ 287 (514)
T ss_dssp EEEEEESSEEEESCSEEEEESCCEEEEEES
T ss_pred ccEEECchhhcccccccEEEEeeeccCCcc
Confidence 56666663 578 9999998876543
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=95.35 E-value=0.36 Score=41.87 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=58.8
Q ss_pred eccEEEEeEEEeccCcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecCCceEEecCCceeEEEE
Q 015254 150 ITNSVVQDVTSLNSKQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTGDDCISIGDGTQQMEIN 229 (410)
Q Consensus 150 ~~nv~I~~i~i~ns~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~ 229 (410)
.++.+++|+.|-.+...+||... +.+|+|+.... -..|.+.+.++..++|.+.-.++.+|=|-=..+.-.+.|+
T Consensus 47 e~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwed----VcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 120 (197)
T 1ee6_A 47 EAGASLKNVVIGAPAADGVHCYG--DCTITNVIWED----VGEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIR 120 (197)
T ss_dssp CTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESS----CCSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeee----ccccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEe
Confidence 34677777777655566676654 36666666665 2456666665555666666666555544333334456666
Q ss_pred eEEEcCCceEEEeecCccCCCCCEEEEEEEceEEecCC
Q 015254 230 KIDCGPGHGISVGSLGKYQNEQPVVGIRVRECNISNTS 267 (410)
Q Consensus 230 n~~~~~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~ 267 (410)
|.+.. ..|=-.-|.|. ...-++|.++|+++.+..
T Consensus 121 nF~~~-~~GKl~RScGn---c~~~r~v~i~~v~~~~~k 154 (197)
T 1ee6_A 121 NFRAD-DIGKLVRQNGG---TTYKVVMNVENCNISRVK 154 (197)
T ss_dssp SCEEE-EEEEEEEECTT---CCSCEEEEEESCEEEEEE
T ss_pred eEEEc-cCCEEEEcCCC---CccceEEEEeceEEECce
Confidence 65442 22322223332 122356666666666544
No 77
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=94.79 E-value=0.16 Score=51.40 Aligned_cols=141 Identities=6% Similarity=-0.055 Sum_probs=95.0
Q ss_pred eccEEEEeEEEecc-CcceEEEeCeeeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEecC-----CceEEecCCc
Q 015254 150 ITNSVVQDVTSLNS-KQFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGTG-----DDCISIGDGT 223 (410)
Q Consensus 150 ~~nv~I~~i~i~ns-~~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~s~~ 223 (410)
..+.+|++=.+.+. ....+....+.+.+|++.++... ..||.+..+++.+|++..|... ..||.+..
T Consensus 227 s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~-- 299 (506)
T 1dbg_A 227 IGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG-- 299 (506)
T ss_dssp BCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS--
T ss_pred cCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC--
Confidence 46778877777654 23445555566788999999973 4479988888889999988754 36787755
Q ss_pred eeEEEEeEEEcCCc--------eEEEeecCccCCCCCEEEEEEEceEEecCCe-eEEEE----------ecCCCCCccee
Q 015254 224 QQMEINKIDCGPGH--------GISVGSLGKYQNEQPVVGIRVRECNISNTSN-GVRIK----------TWPASYPGTAS 284 (410)
Q Consensus 224 ~nv~I~n~~~~~~~--------Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~-gi~ik----------s~~g~~~g~v~ 284 (410)
++.+|+|+++.... |+.+........-..+++++|++++|.++.. ||.+. .-.....-.-.
T Consensus 300 ~~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p~ 379 (506)
T 1dbg_A 300 SRHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETPH 379 (506)
T ss_dssp BSCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCCC
T ss_pred CCCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccCCC
Confidence 35599999986532 6666321100012457899999999999987 99987 11101113447
Q ss_pred eEEEEeEEEecCC
Q 015254 285 DLHFEDIKMNNVS 297 (410)
Q Consensus 285 nI~~~ni~~~~~~ 297 (410)
|++|.|.-+.+..
T Consensus 380 ~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 380 QLMLKGNLFFKDK 392 (506)
T ss_dssp SEEEESCEEECCS
T ss_pred cEEEEccEEEcCC
Confidence 8888887776654
No 78
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=93.70 E-value=4.4 Score=38.10 Aligned_cols=16 Identities=25% Similarity=0.206 Sum_probs=11.0
Q ss_pred eEEEEeCeEecCCCCCC
Q 015254 110 HLTVSGGGTFDGQGAVA 126 (410)
Q Consensus 110 nv~I~G~G~idG~g~~~ 126 (410)
.-+|.| +++||.+..|
T Consensus 124 ~~~i~g-~t~Dgg~k~~ 139 (344)
T 3b4n_A 124 GATFEN-RTVDCGGVTI 139 (344)
T ss_dssp TEEEES-SEEECTTCEE
T ss_pred ceeEec-ceEcCCCcEE
Confidence 345666 6888887764
No 79
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=93.45 E-value=0.61 Score=44.68 Aligned_cols=112 Identities=9% Similarity=0.083 Sum_probs=74.5
Q ss_pred CeeeEEEEeEEEECCCC--------------CCCCCceEe---eccccEEEEeeEEecCCceEEecCCceeEEEEeEEEc
Q 015254 172 GAKNFTFQRVTVTAPEE--------------SLNTDGIHV---GRSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCG 234 (410)
Q Consensus 172 ~~~nv~i~n~~i~~~~~--------------~~n~DGi~~---~~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~ 234 (410)
.+++++++|++|.+... ....+...+ ..++++.+.+|.|....|.+..+. ....+++|++.
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC--CCEEEEcCEEE
Confidence 46899999999998651 112333333 247899999999999888888876 37889999998
Q ss_pred CCceEEEeecCccCCCCCEEEEEEEceEEecCCe---e-----EEEEecCCCCCcceeeEEEEeEEEecC
Q 015254 235 PGHGISVGSLGKYQNEQPVVGIRVRECNISNTSN---G-----VRIKTWPASYPGTASDLHFEDIKMNNV 296 (410)
Q Consensus 235 ~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~---g-----i~iks~~g~~~g~v~nI~~~ni~~~~~ 296 (410)
+.-.+-+|. -...|+||++.-... + -.|... ......-..+.|.|+++...
T Consensus 172 G~vDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~-~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 172 GTVDFIFGD----------GTALFNNCDLVSRYRADVKSGNVSGYLTAP-STNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCTTSCTTSCCEEEEEE-CCBTTCSCCEEEESCEEEES
T ss_pred eceEEEeCC----------ceEEEecCEEEEecCcccccccCceEEEcc-CCCCCCCCEEEEEcCEEecC
Confidence 666666664 237799999875321 0 123222 11112334578889988764
No 80
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.32 E-value=2 Score=37.18 Aligned_cols=108 Identities=17% Similarity=0.263 Sum_probs=66.5
Q ss_pred eeEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEec-CCceEEecCCceeEEEEeEEEcCCce--EEEeecCccCCC
Q 015254 174 KNFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGT-GDDCISIGDGTQQMEINKIDCGPGHG--ISVGSLGKYQNE 250 (410)
Q Consensus 174 ~nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~s~~~nv~I~n~~~~~~~G--i~igs~g~~~~~ 250 (410)
...+++|+.|-. ...||||... +-+|+|+.+.. +.|++.+++ ...++|.+.-..++.. ++.-
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~N-------- 112 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQIN-------- 112 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEEC--------
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEec--------
Confidence 457889998865 4789999975 58999999885 889999985 3455665554433322 3331
Q ss_pred CCEEEEEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCCccEE
Q 015254 251 QPVVGIRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVSNPIL 301 (410)
Q Consensus 251 ~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~~~i~ 301 (410)
.--.+.|+|.++.+ .|=-..+..+. -.-++|.++|+++.+....+.
T Consensus 113 -g~Gtv~I~nF~~~~--~GKl~RScGnc--~~~r~v~i~~v~~~~~k~~i~ 158 (197)
T 1ee6_A 113 -AAGTINIRNFRADD--IGKLVRQNGGT--TYKVVMNVENCNISRVKDAIL 158 (197)
T ss_dssp -SSEEEEEESCEEEE--EEEEEEECTTC--CSCEEEEEESCEEEEEEEEEE
T ss_pred -CCceEEEeeEEEcc--CCEEEEcCCCC--ccceEEEEeceEEECceEEEE
Confidence 11346677766653 23223333222 123777777777777554433
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=90.42 E-value=3.9 Score=39.38 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=75.8
Q ss_pred CeeeEEEEeEEEECCCC----------------CCCCCceEee-ccccEEEEeeEEecCCceEEecCCceeEEEEeEEEc
Q 015254 172 GAKNFTFQRVTVTAPEE----------------SLNTDGIHVG-RSSGVTITDSKIGTGDDCISIGDGTQQMEINKIDCG 234 (410)
Q Consensus 172 ~~~nv~i~n~~i~~~~~----------------~~n~DGi~~~-~s~nv~I~n~~i~~gdD~i~i~s~~~nv~I~n~~~~ 234 (410)
.+++++++|++|.|... ..-.-++.+. .+++..+.+|.|....|.+..+. .....+++|++.
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~ 198 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEIS 198 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEE
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEE
Confidence 45789999999998642 0122344454 47899999999999889888872 248899999998
Q ss_pred CCceEEEeecCccCCCCCEEEEEEEceEEecCC------eeEEEEecCCCCCcceeeEEEEeEEEecC
Q 015254 235 PGHGISVGSLGKYQNEQPVVGIRVRECNISNTS------NGVRIKTWPASYPGTASDLHFEDIKMNNV 296 (410)
Q Consensus 235 ~~~Gi~igs~g~~~~~~~v~nv~i~n~~~~~~~------~gi~iks~~g~~~g~v~nI~~~ni~~~~~ 296 (410)
+.-.+-+|. -...|+||++.-.. .+-.|.... .....-..+.|.|+++...
T Consensus 199 GtvDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~g~ITA~~-~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 199 GHVDFIFGS----------GITVFDNCNIVARDRSDIEPPYGYITAPS-TLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCSSCSSCCEEEEEEC-CCTTCSCCEEEESCEEEEC
T ss_pred cCCCEECCc----------ceEEEEeeEEEEeccCcccCCccEEEeCC-cCCCCCcEEEEEeeEEecC
Confidence 766777764 34679999986531 112232221 1112335578999998754
No 82
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=85.05 E-value=8.1 Score=37.27 Aligned_cols=60 Identities=17% Similarity=0.101 Sum_probs=33.2
Q ss_pred cccEEEEeeE-EecCCceEEecCC---------------------ceeEEEEeEEEcCCceEEEeecCccCCCCCEEEEE
Q 015254 200 SSGVTITDSK-IGTGDDCISIGDG---------------------TQQMEINKIDCGPGHGISVGSLGKYQNEQPVVGIR 257 (410)
Q Consensus 200 s~nv~I~n~~-i~~gdD~i~i~s~---------------------~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~nv~ 257 (410)
+-|.+++|+. +..--|++.+++. -.|-.|+|+....+.|+.+|--| ..+.++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCMGIGAWWDG---QKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCSSCSSEECS---SSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccceeeeeecC---CCCeEeeEE
Confidence 4455666654 3345566666551 14566666666666665554433 345666666
Q ss_pred EEceE
Q 015254 258 VRECN 262 (410)
Q Consensus 258 i~n~~ 262 (410)
+++|.
T Consensus 339 ~~dca 343 (543)
T 3riq_A 339 TYEAH 343 (543)
T ss_dssp EESCS
T ss_pred eeccc
Confidence 55553
No 83
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=77.17 E-value=23 Score=33.31 Aligned_cols=50 Identities=18% Similarity=0.126 Sum_probs=32.6
Q ss_pred eEEEEeEEEECCCCCCCCCceEeeccccEEEEeeEEec-CCceEEecCCceeEEEEeE
Q 015254 175 NFTFQRVTVTAPEESLNTDGIHVGRSSGVTITDSKIGT-GDDCISIGDGTQQMEINKI 231 (410)
Q Consensus 175 nv~i~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~s~~~nv~I~n~ 231 (410)
..+++|+.|-. ...||||... .+.+|+|+.+.. +.|++.++. ..++|.+.
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg--~~~~I~GG 209 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG--KTMTIVGG 209 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS--SEEEEESC
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC--ceEEEECc
Confidence 35677776643 3678888862 257888888775 778888874 24555443
No 84
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=64.02 E-value=35 Score=32.30 Aligned_cols=81 Identities=20% Similarity=0.280 Sum_probs=52.8
Q ss_pred cccEEEEeeEEe-cCCceEEecCC-----------------------ceeEEEEeEEEcCCceEEEeecCccCCCCCEEE
Q 015254 200 SSGVTITDSKIG-TGDDCISIGDG-----------------------TQQMEINKIDCGPGHGISVGSLGKYQNEQPVVG 255 (410)
Q Consensus 200 s~nv~I~n~~i~-~gdD~i~i~s~-----------------------~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~n 255 (410)
+-|..++++..- .-.|++.+++. -.|-+|.|..+.++-|+.+|-.| ..++|+|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 557788887654 45677777662 25788888888877777776554 4578888
Q ss_pred EEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecC
Q 015254 256 IRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNV 296 (410)
Q Consensus 256 v~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~ 296 (410)
|+++||- ..|...-++ +-+|.||++-++
T Consensus 346 itv~DCA----GsG~~~~t~---------~~~FtNi~vID~ 373 (559)
T 2vfm_A 346 ITVEDCA----GSGAYLLTH---------ESVFTNIAIIDT 373 (559)
T ss_dssp EEEESCS----SEEEEEEEE---------SCEEEEEEEESC
T ss_pred eEehhcc----CcceEEeec---------cceeeeeEEEec
Confidence 8888874 334544333 224666666554
No 85
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=62.97 E-value=35 Score=32.33 Aligned_cols=120 Identities=14% Similarity=0.228 Sum_probs=69.1
Q ss_pred cccEEEEeeEEe-cCCceEEecCC-----------------------ceeEEEEeEEEcCCceEEEeecCccCCCCCEEE
Q 015254 200 SSGVTITDSKIG-TGDDCISIGDG-----------------------TQQMEINKIDCGPGHGISVGSLGKYQNEQPVVG 255 (410)
Q Consensus 200 s~nv~I~n~~i~-~gdD~i~i~s~-----------------------~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~n 255 (410)
+-|..++++..- .-.|++.+++. -.|-+|.|..+.++-|+.+|-.| ..++|+|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDG---SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 557888887654 45677777662 26788888888877777776554 4578888
Q ss_pred EEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecCC------ccEEEEeeeCCC----CCCCCCCCCce--eEE
Q 015254 256 IRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNVS------NPILLDQVYCPH----NQCNAKVPSRV--KLD 323 (410)
Q Consensus 256 v~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~~------~~i~i~~~~~~~----~~~~~~~~~~~--~i~ 323 (410)
|+++||- ..|...-++ +-+|.||++-++. ..|.|....--. ....+.+..+. .--
T Consensus 349 itv~DCA----GsG~~~~t~---------~~~FtNi~vID~N~~nF~adQi~I~G~C~VNGlR~~GIk~~~~~Gl~i~AP 415 (559)
T 2v5i_A 349 VTVQDCA----GAGMLAHTY---------NRVFSNITVIDCNYLNFDSDQIIIIGDCIVNGIRAAGIKPQPSNGLVISAP 415 (559)
T ss_dssp EEEESCS----SEEEEEEEE---------SCEEEEEEEESCCTTCCSSCSEEECSSCEEEEEECCCSSCCCSSSCSEEEE
T ss_pred eEehhcc----CcceEEeec---------cceeeeeEEEecccccCCcceEEEEcceEEcceEEeeeccCCCCceEEeCC
Confidence 8888874 335544333 2246666665543 234443310000 00001222233 344
Q ss_pred eEEEEeEEEeec
Q 015254 324 RVSFKNIRGTSA 335 (410)
Q Consensus 324 nVtf~nI~~~~~ 335 (410)
|-|++.|++...
T Consensus 416 nsTiSGi~G~V~ 427 (559)
T 2v5i_A 416 NSTISGLVGNVP 427 (559)
T ss_dssp EEEEEEEESSCC
T ss_pred CCcccceeccCC
Confidence 888888887654
No 86
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=53.51 E-value=65 Score=31.77 Aligned_cols=81 Identities=20% Similarity=0.267 Sum_probs=52.5
Q ss_pred cccEEEEeeEEe-cCCceEEecCC-----------------------ceeEEEEeEEEcCCceEEEeecCccCCCCCEEE
Q 015254 200 SSGVTITDSKIG-TGDDCISIGDG-----------------------TQQMEINKIDCGPGHGISVGSLGKYQNEQPVVG 255 (410)
Q Consensus 200 s~nv~I~n~~i~-~gdD~i~i~s~-----------------------~~nv~I~n~~~~~~~Gi~igs~g~~~~~~~v~n 255 (410)
+-|..++++..- .-.|++.+++. -.|-+|.|..+.++-|+.+|-.| ..++|+|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg---~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 557888887654 45677777662 25778888888877777776554 4578888
Q ss_pred EEEEceEEecCCeeEEEEecCCCCCcceeeEEEEeEEEecC
Q 015254 256 IRVRECNISNTSNGVRIKTWPASYPGTASDLHFEDIKMNNV 296 (410)
Q Consensus 256 v~i~n~~~~~~~~gi~iks~~g~~~g~v~nI~~~ni~~~~~ 296 (410)
|+++||- ..|...-++. -+|.||++-++
T Consensus 453 itv~dca----g~g~~~~~~~---------~~ftni~vid~ 480 (666)
T 2xc1_A 453 ITVEDCA----GSGAYLLTHE---------SVFTNIAIIDT 480 (666)
T ss_dssp EEEESCS----SEEEEEEEES---------CEEEEEEEESC
T ss_pred eEehhcc----CcceEEeecc---------ceeeeeEEEec
Confidence 8888874 3344443332 24666666544
No 87
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=47.62 E-value=6.9 Score=38.08 Aligned_cols=19 Identities=32% Similarity=0.361 Sum_probs=16.8
Q ss_pred CCCcCC--chhHHHHHHHHHH
Q 015254 29 HGAKQN--ADISQALRDAWKE 47 (410)
Q Consensus 29 ~Ga~gd--tDdt~aiq~Ai~~ 47 (410)
=||+|| +|||+|+.+|+.+
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~ 24 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALND 24 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHH
T ss_pred CcccCCCccCcHHHHHHHhcc
Confidence 489999 9999999999854
No 88
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.99 E-value=24 Score=30.13 Aligned_cols=12 Identities=8% Similarity=0.290 Sum_probs=7.4
Q ss_pred eEEEEeeccEEE
Q 015254 144 NLSFNAITNSVV 155 (410)
Q Consensus 144 ~i~~~~~~nv~I 155 (410)
.+.+.+|++++|
T Consensus 70 sv~i~~C~~~~i 81 (179)
T 2yuh_A 70 SVFLEDCSDCVL 81 (179)
T ss_dssp CEEEESCBSCEE
T ss_pred EEEEEeCCceEE
Confidence 466666666665
No 89
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=32.52 E-value=76 Score=30.13 Aligned_cols=12 Identities=17% Similarity=0.506 Sum_probs=5.6
Q ss_pred eEEEEeeccEEE
Q 015254 144 NLSFNAITNSVV 155 (410)
Q Consensus 144 ~i~~~~~~nv~I 155 (410)
.+.+.+|+|.+|
T Consensus 82 sl~I~~c~nC~I 93 (352)
T 3bh7_B 82 TVTIDDCTNCII 93 (352)
T ss_dssp CEEEESCBSCEE
T ss_pred eEEEecCCCCEE
Confidence 345555554443
No 90
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=31.58 E-value=3.4e+02 Score=25.69 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=41.4
Q ss_pred ceeEEEEeEEEcCC--ceEEEeecCc---------------cCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceee
Q 015254 223 TQQMEINKIDCGPG--HGISVGSLGK---------------YQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASD 285 (410)
Q Consensus 223 ~~nv~I~n~~~~~~--~Gi~igs~g~---------------~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~n 285 (410)
.-|+.+++...-.- +|+.+|+... ++...-..|=.|.|+.++++- |+.+.-. |. +++|+|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsL-GVG~GMD-G~-G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL-GVGFGMD-GK-GMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCS-SEEEEEE-EE-SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc-ceeeeec-CC-CceEee
Confidence 36888998876543 5888887421 111122345578888888876 4444332 22 588888
Q ss_pred EEEEeEE
Q 015254 286 LHFEDIK 292 (410)
Q Consensus 286 I~~~ni~ 292 (410)
|++++|.
T Consensus 346 itv~DCA 352 (559)
T 2vfm_A 346 ITVEDCA 352 (559)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 8888764
No 91
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=31.53 E-value=3.4e+02 Score=25.68 Aligned_cols=67 Identities=19% Similarity=0.162 Sum_probs=40.1
Q ss_pred ceeEEEEeEEEcCC--ceEEEeecCc---------------cCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceee
Q 015254 223 TQQMEINKIDCGPG--HGISVGSLGK---------------YQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASD 285 (410)
Q Consensus 223 ~~nv~I~n~~~~~~--~Gi~igs~g~---------------~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~n 285 (410)
.-|+.+++...-.- +|+.+|+... ++...-..|=.|.|+.++++- |+.+.-. |. +++|+|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsL-GVG~GMD-G~-G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSL-GVGLGMD-GS-GGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCS-SEEEEEE-EE-SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc-ceeeeec-CC-CceEee
Confidence 36888888876442 4788777421 111122345578888888876 4444332 22 578888
Q ss_pred EEEEeEE
Q 015254 286 LHFEDIK 292 (410)
Q Consensus 286 I~~~ni~ 292 (410)
|++++|.
T Consensus 349 itv~DCA 355 (559)
T 2v5i_A 349 VTVQDCA 355 (559)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 8777753
No 92
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=28.88 E-value=4.3e+02 Score=26.08 Aligned_cols=68 Identities=13% Similarity=0.075 Sum_probs=42.1
Q ss_pred ceeEEEEeEEEcCC--ceEEEeecCc---------------cCCCCCEEEEEEEceEEecCCeeEEEEecCCCCCcceee
Q 015254 223 TQQMEINKIDCGPG--HGISVGSLGK---------------YQNEQPVVGIRVRECNISNTSNGVRIKTWPASYPGTASD 285 (410)
Q Consensus 223 ~~nv~I~n~~~~~~--~Gi~igs~g~---------------~~~~~~v~nv~i~n~~~~~~~~gi~iks~~g~~~g~v~n 285 (410)
.-|+.+++...-.- +|+.+|+... +....-..|=.|.|+.++++- |+.++-. |. +++|+|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~sl-gvg~gmd-g~-g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL-GVGFGMD-GK-GMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCS-SEEEEEE-EE-SCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc-ceeeeec-CC-CceEee
Confidence 46888998876543 5888887421 111122345578888888876 4444332 22 589999
Q ss_pred EEEEeEEE
Q 015254 286 LHFEDIKM 293 (410)
Q Consensus 286 I~~~ni~~ 293 (410)
|++++|.-
T Consensus 453 itv~dcag 460 (666)
T 2xc1_A 453 ITVEDCAG 460 (666)
T ss_dssp EEEESCSS
T ss_pred eEehhccC
Confidence 88888743
No 93
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=26.80 E-value=47 Score=19.21 Aligned_cols=19 Identities=21% Similarity=-0.008 Sum_probs=8.2
Q ss_pred hhhHHHHHHHHHhhhccce
Q 015254 4 SNILALFLSLLMLSAAAAL 22 (410)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~ 22 (410)
|..+++.+++.-.+.+.|+
T Consensus 9 wlai~c~LLfs~Ls~vkAr 27 (30)
T 1z65_A 9 WVAILCMLLASHLSTVKAR 27 (30)
T ss_dssp HHHHHHHHHHHHTTTTCCC
T ss_pred HHHHHHHHHHhhHHHHHhc
Confidence 3344444444444443343
No 94
>2jna_A Putative secreted protein; GFT-homodimer, PSI-2, alpha+beta, putative secreted Pro structural genomics, protein structure initiative; NMR {Salmonella typhimurium} SCOP: d.230.6.1
Probab=26.32 E-value=4.3 Score=31.61 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=13.3
Q ss_pred eeEeec-CCCcCC-chhHHHHHHH
Q 015254 23 DVDVTK-HGAKQN-ADISQALRDA 44 (410)
Q Consensus 23 ~~~v~d-~Ga~gd-tDdt~aiq~A 44 (410)
+++|.. +|+.+. .|-.++|.+-
T Consensus 40 ~ISvs~~~~~~~s~~da~~~La~k 63 (104)
T 2jna_A 40 TINVSQSGGQISSPSDLREKLSEL 63 (104)
T ss_dssp EEEEEEESSSCCSHHHHHHHHHHH
T ss_pred EEEEecccCCCCCHHHHHHHHHHH
Confidence 367776 766666 5555555543
No 95
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=24.38 E-value=4.3e+02 Score=24.48 Aligned_cols=110 Identities=15% Similarity=0.260 Sum_probs=67.0
Q ss_pred eEEEEeeccEEEEeEEEeccC------cceEEEeCeeeEEEEeEEEECCCCCCCCCceEee------ccccEEEEeeEEe
Q 015254 144 NLSFNAITNSVVQDVTSLNSK------QFHINVIGAKNFTFQRVTVTAPEESLNTDGIHVG------RSSGVTITDSKIG 211 (410)
Q Consensus 144 ~i~~~~~~nv~I~~i~i~ns~------~~~i~~~~~~nv~i~n~~i~~~~~~~n~DGi~~~------~s~nv~I~n~~i~ 211 (410)
.+.|...+.-.++++++.... .+.+.+....+|.++|+++.+. ..-|+.+. ......|++++-.
T Consensus 130 ~lvfn~p~~g~ls~~ti~~nk~~ds~qg~qvs~~gg~dvsv~~i~fsn~----~g~gfsliayp~~~~p~g~~i~~irg~ 205 (542)
T 2x3h_A 130 YLVFNNPRTGRLSNITVESNKATDTTQGQQVSLAGGSDVTVSDVNFSNV----KGTGFSLIAYPNDAPPDGLMIKGIRGS 205 (542)
T ss_dssp CEEEESCEEEEEEEEEEECCCSSTTCBCCSEEEESCEEEEEEEEEEEEE----CSBEEEEEEECSSSCCBSCEEEEEEEE
T ss_pred EEEEeCCCCcceeeEEEecccCCccccceEEEecCCCcceEeeeeeeec----CCCceeEEEcCCCCCCCceEEeccccc
Confidence 477777777888888886432 2458888999999999999873 22233321 1234455555432
Q ss_pred -----c--CCceEEecCCceeEEEEeEEEcC--Cce-EEEeecCccCCCCCEEEEEEEce
Q 015254 212 -----T--GDDCISIGDGTQQMEINKIDCGP--GHG-ISVGSLGKYQNEQPVVGIRVREC 261 (410)
Q Consensus 212 -----~--gdD~i~i~s~~~nv~I~n~~~~~--~~G-i~igs~g~~~~~~~v~nv~i~n~ 261 (410)
+ ...|+-..+ +.|-+|.+....+ .-| +.++.... -.-|+||.=++|
T Consensus 206 y~g~a~nk~agcvl~ds-s~nslid~via~nypqfgavelk~~a~---ynivsnvig~~c 261 (542)
T 2x3h_A 206 YSGYATNKAAGCVLADS-SVNSLIDNVIAKNYPQFGAVELKGTAS---YNIVSNVIGADC 261 (542)
T ss_dssp ECSCCTTCSEEEEEEES-CBSCEEEEEEEESCCTTEEEEEETTCB---SCEEEEEEEESC
T ss_pred eeccccccccceEEecc-chhhhhhhhhhhcCCccceEEeeccee---eehhhhhhhccc
Confidence 1 134555555 6788888887754 344 77765422 134566655554
Done!