Query 015256
Match_columns 410
No_of_seqs 173 out of 1330
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 09:25:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 99.9 9.2E-26 3.1E-30 230.6 15.1 172 22-197 207-398 (413)
2 1t6e_X Xylanase inhibitor; two 99.9 2.8E-25 9.4E-30 223.8 17.0 172 22-199 188-374 (381)
3 1lya_B Cathepsin D; lysosomal 99.9 9E-25 3.1E-29 206.1 15.8 153 18-197 82-240 (241)
4 3aup_A SBG7S, BG, basic 7S glo 99.9 3.7E-25 1.3E-29 224.5 12.7 166 25-203 216-398 (403)
5 2qp8_A Beta-secretase 1; BACE1 99.9 1.7E-24 5.8E-29 218.7 15.0 176 18-203 189-372 (395)
6 2ewy_A Beta-secretase 2; BACE2 99.9 1.3E-24 4.5E-29 218.2 13.8 180 18-208 178-367 (383)
7 1j71_A Candidapepsin, aspartic 99.9 3.3E-24 1.1E-28 212.0 16.2 156 19-207 177-333 (334)
8 3vf3_A Beta-secretase 1; struc 99.9 3.2E-24 1.1E-28 216.9 15.7 176 18-204 196-380 (402)
9 3fv3_A SAPP1P-secreted asparti 99.9 4.2E-24 1.4E-28 211.0 14.9 161 18-207 178-338 (339)
10 2qzx_A Candidapepsin-5; aspart 99.9 4.2E-24 1.4E-28 211.7 14.7 162 19-208 177-341 (342)
11 3lpj_A Beta-secretase 1; alzhe 99.9 4.7E-24 1.6E-28 219.7 14.9 175 18-203 242-425 (455)
12 3pvk_A Candidapepsin-2; hydrol 99.9 4.3E-24 1.5E-28 210.9 13.5 164 18-208 175-341 (342)
13 1tzs_A Cathepsin E; hydrolase, 99.9 1E-23 3.5E-28 210.0 15.3 156 18-201 184-345 (351)
14 2x0b_A Renin; hydrolase-hormon 99.9 1.2E-23 4.3E-28 213.0 13.3 152 18-197 225-382 (383)
15 3cms_A Chymosin B; hydrolase, 99.9 4E-23 1.4E-27 203.3 16.2 150 18-198 172-323 (323)
16 1dpj_A Proteinase A; proteinas 99.9 1.4E-22 4.7E-27 199.8 18.0 149 18-198 175-329 (329)
17 1ibq_A Aspergillopepsin; aspar 99.9 4.2E-23 1.4E-27 203.5 13.6 153 18-197 170-324 (325)
18 4aa9_A Chymosin; hydrolase, as 99.9 8.3E-23 2.8E-27 200.1 15.1 150 18-198 169-320 (320)
19 1mpp_A Pepsin; hydrolase(acid 99.9 2.4E-23 8.2E-28 207.7 11.0 159 18-202 188-359 (361)
20 1qdm_A Prophytepsin; aspartic 99.9 8.9E-23 3E-27 212.4 15.5 169 18-197 214-477 (478)
21 1yg9_A Aspartic protease BLA G 99.9 7.7E-23 2.6E-27 202.2 14.2 151 18-197 176-328 (330)
22 1miq_A Plasmepsin; aspartic pr 99.9 1.3E-22 4.5E-27 204.5 15.6 149 18-197 222-373 (375)
23 3k1w_A Renin; protease, altern 99.9 1.1E-22 3.6E-27 200.8 14.4 153 18-198 182-340 (341)
24 1izd_A Aspartic proteinase; su 99.9 1.3E-22 4.5E-27 200.0 15.0 151 17-197 170-322 (323)
25 3c9x_A Trichoderma reesei aspa 99.9 9.8E-23 3.3E-27 201.2 13.9 153 18-197 175-329 (329)
26 1htr_B Gastricsin; aspartyl pr 99.9 1.4E-22 4.7E-27 199.8 14.5 150 18-197 172-328 (329)
27 3psg_A Pepsinogen; hydrolase(a 99.9 1E-22 3.6E-27 204.9 13.9 151 17-198 214-370 (370)
28 1oew_A Endothiapepsin; hydrola 99.9 9.4E-23 3.2E-27 201.3 12.7 154 17-197 173-329 (329)
29 1am5_A Pepsin, acid proteinase 99.9 1.4E-22 4.9E-27 199.2 13.4 148 18-198 171-324 (324)
30 1bxo_A Protein (penicillopepsi 99.9 1.4E-22 4.9E-27 199.5 13.3 150 18-197 171-322 (323)
31 2apr_A Rhizopuspepsin; hydrola 99.9 6E-22 2E-26 195.3 16.4 148 18-197 175-323 (325)
32 1wkr_A Polyporopepsin; hydrola 99.9 1E-21 3.5E-26 194.4 13.1 160 18-202 166-337 (340)
33 3qvc_A Histo-aspartic protease 99.8 3.3E-21 1.1E-25 199.4 13.3 151 17-198 296-449 (451)
34 2bju_A Plasmepsin II; aspartic 99.8 4.1E-21 1.4E-25 198.8 11.3 150 18-198 298-450 (453)
35 1b5f_B Protein (cardosin A); h 99.6 3.5E-16 1.2E-20 126.3 8.7 77 119-197 5-86 (87)
36 1b5f_A Protein (cardosin A); h 98.7 1.2E-08 4E-13 96.3 5.2 68 18-94 171-238 (239)
37 2i1a_A DNA damage-inducible pr 94.7 0.21 7.1E-06 42.8 10.0 27 169-195 108-134 (148)
38 3s8i_A Protein DDI1 homolog 1; 93.8 0.17 5.9E-06 44.2 7.7 111 40-197 23-135 (148)
39 2ks1_B Epidermal growth factor 90.6 0.19 6.5E-06 35.4 3.1 33 357-389 8-41 (44)
40 2l2t_A Receptor tyrosine-prote 89.1 0.32 1.1E-05 34.2 3.2 31 360-390 10-41 (44)
41 2k9y_A Ephrin type-A receptor 85.9 0.43 1.5E-05 32.5 2.4 31 356-386 9-40 (41)
42 2k1k_A Ephrin type-A receptor 75.9 1.8 6.3E-05 29.3 2.7 23 364-386 14-38 (38)
43 2jwa_A Receptor tyrosine-prote 66.8 5 0.00017 28.1 3.2 7 381-387 33-39 (44)
44 2l9u_A Receptor tyrosine-prote 63.8 7.3 0.00025 26.0 3.4 12 378-389 25-36 (40)
45 1iv3_A 2-C-methyl-D-erythritol 58.7 13 0.00043 32.8 5.1 50 245-296 88-137 (152)
46 2pmp_A 2-C-methyl-D-erythritol 58.2 13 0.00044 33.0 5.1 49 245-295 91-139 (160)
47 1gx1_A 2-C-methyl-D-erythritol 57.1 14 0.00049 32.7 5.2 48 245-294 89-136 (160)
48 3re3_A 2-C-methyl-D-erythritol 57.0 14 0.00048 32.8 5.1 48 246-295 95-142 (162)
49 1t0a_A 2C-methyl-D-erythritol 56.8 14 0.0005 32.6 5.2 49 245-295 90-138 (159)
50 3f0d_A 2-C-methyl-D-erythritol 51.6 19 0.00063 32.6 5.1 49 245-295 111-159 (183)
51 2knc_B Integrin beta-3; transm 49.2 11 0.00038 29.4 2.9 24 358-384 9-33 (79)
52 1bxo_A Protein (penicillopepsi 48.2 23 0.00078 33.7 5.6 42 23-83 3-44 (323)
53 1ibq_A Aspergillopepsin; aspar 47.8 26 0.0009 33.3 6.0 42 23-83 2-43 (325)
54 3b6n_A 2-C-methyl-D-erythritol 43.8 20 0.0007 32.4 4.1 49 245-295 116-164 (187)
55 2klu_A T-cell surface glycopro 43.2 15 0.00051 28.0 2.6 36 354-390 4-42 (70)
56 1izd_A Aspartic proteinase; su 42.0 33 0.0011 32.6 5.6 42 23-83 3-44 (323)
57 1iij_A ERBB-2 receptor protein 41.9 13 0.00044 24.8 1.8 12 375-386 23-34 (35)
58 2k9j_B Integrin beta-3; transm 39.7 21 0.00073 24.6 2.8 23 358-380 8-31 (43)
59 1s7q_A H-2KB, H-2 class I hist 36.7 8.4 0.00029 37.8 0.4 18 380-397 305-325 (348)
60 3c9x_A Trichoderma reesei aspa 34.0 58 0.002 30.9 6.0 42 23-83 2-46 (329)
61 1oew_A Endothiapepsin; hydrola 33.2 61 0.0021 30.7 6.0 41 24-83 3-46 (329)
62 1scf_A Stem cell factor; steel 33.1 9.1 0.00031 36.2 0.0 26 361-388 217-242 (273)
63 2knc_B Integrin beta-3; transm 32.4 28 0.00095 27.1 2.7 28 359-386 14-41 (79)
64 1w55_A ISPD/ISPF bifunctional 31.4 53 0.0018 32.4 5.3 45 251-295 301-345 (371)
65 1n91_A ORF, hypothetical prote 30.7 24 0.00081 29.2 2.2 33 269-305 53-85 (108)
66 1cd1_A CD1, MCD1D.1; immunolog 30.4 12 0.00041 35.9 0.4 8 49-56 27-34 (315)
67 2kog_A Vesicle-associated memb 29.7 27 0.00092 29.2 2.4 23 350-372 88-110 (119)
68 2lx0_A Membrane fusion protein 29.3 42 0.0014 21.2 2.6 15 368-382 12-26 (32)
69 1lya_A Cathepsin D; lysosomal 28.5 51 0.0018 26.0 3.8 32 38-83 11-44 (97)
70 2apr_A Rhizopuspepsin; hydrola 26.2 75 0.0026 30.0 5.2 41 24-83 4-46 (325)
71 1mpp_A Pepsin; hydrolase(acid 24.4 71 0.0024 30.6 4.7 44 23-83 4-49 (361)
72 2kvr_A Ubiquitin carboxyl-term 23.4 51 0.0018 27.8 3.0 34 265-298 65-98 (130)
73 2uzh_A 2C-methyl-D-erythritol 22.8 91 0.0031 27.6 4.6 36 245-282 93-128 (165)
74 1ywx_A 30S ribosomal protein S 21.7 1.1E+02 0.0037 25.0 4.5 44 247-294 15-58 (102)
75 3slz_A GAG-Pro-POL polyprotein 21.0 77 0.0026 26.9 3.6 24 48-82 26-49 (132)
76 1xn9_A 30S ribosomal protein S 20.0 1.2E+02 0.0042 24.5 4.5 44 247-294 15-58 (101)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=99.93 E-value=9.2e-26 Score=230.63 Aligned_cols=172 Identities=23% Similarity=0.394 Sum_probs=133.4
Q ss_pred ceee-eeeEEccCcCCC---------CCCcEEEEEeEEEECCEEeecCCcccc----CCCcEEEecCCcceecCHHHHHH
Q 015256 22 RYGI-LPFRPFPQFLAG---------NSPYYNIELKELRVAGKPLKVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAA 87 (410)
Q Consensus 22 ~~G~-~~~vPv~~~~~~---------~~~yY~V~L~gI~Vgg~~l~l~~~~f~----~~~~aIIDSGTT~t~LP~~vy~a 87 (410)
+.|+ +.|+|+...+.. ...||.|+|++|.||++.+.+++..|. ++.++|||||||+++||+++|++
T Consensus 207 ~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~ 286 (413)
T 3vla_A 207 VSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKA 286 (413)
T ss_dssp ECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHH
T ss_pred ccCCceeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHH
Confidence 4577 999999321100 127999999999999999988766553 45789999999999999999999
Q ss_pred HHHHHHHhhh--hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECC-CeEEEeCCCccEEEEcccCCceEEEEE
Q 015256 88 FKDALIKETH--VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGN-GQKLTLSPENYLFRHMKVSGAYCLGIF 164 (410)
Q Consensus 88 Ii~aI~~~~~--~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~g-G~t~tI~p~~Yl~~~~~~~~~~Cl~i~ 164 (410)
|+++|.+++. .+++..+ ..+++.||+.....-.+.+..+|+|+|+|.+ +++|+|++++|+++..+ +.+|+++.
T Consensus 287 l~~a~~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~ 362 (413)
T 3vla_A 287 VTEAFIKESAARNITRVAS--VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVV 362 (413)
T ss_dssp HHHHHHHHHHHTTCCEECC--CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEE
T ss_pred HHHHHHHHhcccCCCcCCC--CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEE
Confidence 9999998875 2333322 1346889965432111122479999999965 49999999999998653 67999887
Q ss_pred EcCC---CCeEEcHHHhhcEEEEEeCCCCEEEEEec
Q 015256 165 QNSD---STTLLGGIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 165 ~s~~---~~~ILG~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
.... +.||||+.|||++|+|||++|+|||||++
T Consensus 363 ~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 363 DGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp EEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 6542 68999999999999999999999999985
No 2
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=99.93 E-value=2.8e-25 Score=223.83 Aligned_cols=172 Identities=17% Similarity=0.324 Sum_probs=130.6
Q ss_pred ceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh----
Q 015256 22 RYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH---- 97 (410)
Q Consensus 22 ~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~---- 97 (410)
+.|++.|+|+.. .+...+|.|+|++|.||++.+.++...|+ +.++|||||||+++||+++|++|+++|.+++.
T Consensus 188 ~~g~l~~tPl~~--~~~~~~y~v~l~~i~vg~~~~~~~~~~~~-~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~ 264 (381)
T 1t6e_X 188 FTQSMPYTPLVT--KGGSPAHYISARSIVVGDTRVPVPEGALA-TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHA 264 (381)
T ss_dssp HHTTCCEEECBC--CTTCCSCEECEEEEEETTEECCCCTTCSC-TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC--
T ss_pred ccCcceeecccc--CCCCcceEEEEEEEEEcCEEecCCHHHcc-CCCEEEECCCccEEeCHHHHHHHHHHHHHhhccccc
Confidence 579999999932 12235677999999999999887665553 46799999999999999999999999988764
Q ss_pred ---hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcCC------
Q 015256 98 ---VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSD------ 168 (410)
Q Consensus 98 ---~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~~------ 168 (410)
.+++... ....++.|++.....-......+|+|+|+|.||++|+|++++|+++.. .+..|+++.....
T Consensus 265 ~g~~~~~~~~-~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~--~~~~Cl~~~~~~~~~~~~~ 341 (381)
T 1t6e_X 265 NGAPVARAVE-AVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVK--QGTACVAFVEMKGVAAGDG 341 (381)
T ss_dssp -----CCEEC-CCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEEEE--TTEEEESEEECCCCC----
T ss_pred ccccccccCC-CCCCCCccCCCCCCcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcC--CCeEEEEEEcCCCcccccC
Confidence 1222211 112457898543211000113699999999767999999999999864 3679998765443
Q ss_pred --CCeEEcHHHhhcEEEEEeCCCCEEEEEecCC
Q 015256 169 --STTLLGGIVVRNTLVTYDRGNDKVGFWKTNC 199 (410)
Q Consensus 169 --~~~ILG~~Fmr~~yVVFD~en~rIGFA~s~C 199 (410)
+.+|||+.|||++|+|||++|+|||||++..
T Consensus 342 ~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 342 RAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp --CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred CCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 5899999999999999999999999998653
No 3
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.92 E-value=9e-25 Score=206.15 Aligned_cols=153 Identities=23% Similarity=0.419 Sum_probs=123.0
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|++++|.||++.+. ...+..+|||||||+++||.++|++|.+++.+...
T Consensus 82 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~~~~~~-----~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~ 151 (241)
T 1lya_B 82 DSKYYKGSLSYLNV-----TRKAYWQVHLDQVEVASGLTL-----CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL 151 (241)
T ss_dssp CGGGEEEEEEEEEC-----SSBTTBEEEEEEEEETTSCEE-----STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE
T ss_pred CHHHcCCceEEEEC-----ccccEEEEEEeEEEECCeeEe-----ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec
Confidence 35667899999999 567899999999999998752 12356899999999999999999999999854321
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC------CCCe
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTT 171 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~------~~~~ 171 (410)
. ...+...|+ .. ..+|+|+|+| +|.+++|++++|+++..+.+...|+..+... .+.+
T Consensus 152 ----~---~g~~~~~C~--------~~-~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 214 (241)
T 1lya_B 152 ----I---QGEYMIPCE--------KV-STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLW 214 (241)
T ss_dssp ----E---TTEEEEEGG--------GG-GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCE
T ss_pred ----c---CCcEEEECC--------CC-ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeE
Confidence 0 112334454 32 4789999999 7999999999999987643357999755432 4689
Q ss_pred EEcHHHhhcEEEEEeCCCCEEEEEec
Q 015256 172 LLGGIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 172 ILG~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
|||+.|||++|+|||++|+|||||++
T Consensus 215 ilG~~fl~~~y~vfD~~~~~igfA~~ 240 (241)
T 1lya_B 215 ILGDVFIGRYYTVFDRDNNRVGFAEA 240 (241)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EechHHhcceEEEEECCCCEEEEEEc
Confidence 99999999999999999999999986
No 4
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=99.92 E-value=3.7e-25 Score=224.47 Aligned_cols=166 Identities=20% Similarity=0.446 Sum_probs=124.8
Q ss_pred eeeeEEccCcCCCCCCcEEEEEeEEEECCEEe-ecCCccc----cCCCcEEEecCCcceecCHHHHHHHHHHHHHhhhhc
Q 015256 25 ILPFRPFPQFLAGNSPYYNIELKELRVAGKPL-KVSPRIF----DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVL 99 (410)
Q Consensus 25 ~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l-~l~~~~f----~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~~~ 99 (410)
++.|+|+.. ....+|.|+|++|.||++.+ .++...+ ++..++|||||||+++||+++|++|+++|.+++..+
T Consensus 216 ~l~~~Pl~~---~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~ 292 (403)
T 3aup_A 216 DLAFTPLTI---TLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQ 292 (403)
T ss_dssp TEEEEECEE---CTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGG
T ss_pred ceeeccccc---CCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccc
Confidence 899999931 11379999999999999988 6655444 134579999999999999999999999998876544
Q ss_pred ccccCCCCCCccccCCCCccccccccCCCCeEEEEECCC--eEEEeCCCccEEEEcccCCceEEEEEEcCC---CCeEEc
Q 015256 100 KRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG--QKLTLSPENYLFRHMKVSGAYCLGIFQNSD---STTLLG 174 (410)
Q Consensus 100 ~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG--~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~~---~~~ILG 174 (410)
++.... ..+++|++ |+.+ ..+|+|+|+|.++ .+|+|++++|+++.. ++..|+++..... +.+|||
T Consensus 293 ~~~~~~--~~~~~c~~-----c~~~-~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~--~~~~C~~~~~~~~~~~~~~ILG 362 (403)
T 3aup_A 293 AQVKSV--APFGLCFN-----SNKI-NAYPSVDLVMDKPNGPVWRISGEDLMVQAQ--PGVTCLGVMNGGMQPRAEITLG 362 (403)
T ss_dssp GEECCC--TTCSCEEC-----GGGC-CCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEEC
T ss_pred cccCCC--CCCCceEE-----CCCc-CcCCcEEEEEcCCCceEEEEcccceEEEcC--CCeEEEEEEcCCCCCCCcEEEC
Confidence 433221 12457874 5433 3799999999655 699999999999764 3679996665442 589999
Q ss_pred HHHhhcEEEEEeCCCCEEEE-------EecCCCccc
Q 015256 175 GIVVRNTLVTYDRGNDKVGF-------WKTNCSELW 203 (410)
Q Consensus 175 ~~Fmr~~yVVFD~en~rIGF-------A~s~C~~~~ 203 (410)
+.|||++|+|||++|+|||| ++++|+.+.
T Consensus 363 ~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~~ 398 (403)
T 3aup_A 363 ARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLF 398 (403)
T ss_dssp HHHHTTSCEEEETTTTEEEEESSCGGGGTCCGGGSC
T ss_pred hHHhcCeEEEEECCCCEEEEecccccccCCCccccc
Confidence 99999999999999999999 566787654
No 5
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=99.91 E-value=1.7e-24 Score=218.68 Aligned_cols=176 Identities=22% Similarity=0.372 Sum_probs=133.9
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..||.|.|++|.||++.+.+++..|+ ...+|||||||+++||+++|++|.++|.+...
T Consensus 189 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 262 (395)
T 2qp8_A 189 DHSLYTGSLWYTPI-----RREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS 262 (395)
T ss_dssp CGGGEEEEEEEEEC-----CSBTTBBCCEEEEEETTEECCCCGGGGG-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT
T ss_pred CcccccCceEEecc-----CCCceEEEEEEEEEECCEEcccCccccC-CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc
Confidence 45668899999999 5568999999999999999887665453 46899999999999999999999999987753
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCe-----EEEeCCCccEEEEcc--cCCceEEE-EEEcCCC
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMK--VSGAYCLG-IFQNSDS 169 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~-----t~tI~p~~Yl~~~~~--~~~~~Cl~-i~~s~~~ 169 (410)
......+....+...|+...... +..+|+|+|+|.++. +|+|+|++|+.+..+ .....|++ .+...++
T Consensus 263 ~~~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~ 338 (395)
T 2qp8_A 263 TEKFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSST 338 (395)
T ss_dssp TSCCCHHHHTTCSCEEESTTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESS
T ss_pred cccCCccccccccccccccccch----HhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCCC
Confidence 11000000001235787543221 236999999996553 799999999998653 12358974 3333367
Q ss_pred CeEEcHHHhhcEEEEEeCCCCEEEEEecCCCccc
Q 015256 170 TTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELW 203 (410)
Q Consensus 170 ~~ILG~~Fmr~~yVVFD~en~rIGFA~s~C~~~~ 203 (410)
.+|||+.|||++|+|||++|+|||||+++|+...
T Consensus 339 ~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 372 (395)
T 2qp8_A 339 GTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 372 (395)
T ss_dssp CEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred cEEEChHHhCCeeEEEECCCCEEEEEeccCCCCC
Confidence 8999999999999999999999999999999643
No 6
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=218.15 Aligned_cols=180 Identities=23% Similarity=0.437 Sum_probs=136.1
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|.|++|.||++.+.+++..|+ ...+|||||||+++||+++|++|.++|.+...
T Consensus 178 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 251 (383)
T 2ewy_A 178 EPSLYKGDIWYTPI-----KEEWYYQIEILKLEIGGQSLNLDCREYN-ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL 251 (383)
T ss_dssp CGGGCCSCEEEEEC-----SSBTTBBCCEEEEEETTEECCCCTTTTT-SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC
T ss_pred chhhccCccEEEec-----CCCceEEEEEEEEEECCEEccccccccC-CccEEEEcCCccccCCHHHHHHHHHHHhhhcc
Confidence 35667899999999 5568999999999999999887655453 46899999999999999999999999987653
Q ss_pred hccccc-CCCCCCccccCCCCccccccccCCCCeEEEEECCC-----eEEEeCCCccEEEEccc-CCceEEEE-EEcCCC
Q 015256 98 VLKRIR-GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG-----QKLTLSPENYLFRHMKV-SGAYCLGI-FQNSDS 169 (410)
Q Consensus 98 ~~~~~~-g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG-----~t~tI~p~~Yl~~~~~~-~~~~Cl~i-~~s~~~ 169 (410)
. .... +....+...|+...... ...+|+|+|+|.++ .+++|++++|+.+..+. .+..|+++ +...++
T Consensus 252 ~-~~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~ 326 (383)
T 2ewy_A 252 I-PEFSDGFWTGSQLACWTNSETP----WSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTN 326 (383)
T ss_dssp S-SCCCHHHHHTSEEEEECSSSCG----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEESS
T ss_pred c-ccCccccccccccccccCCccc----HhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCCCC
Confidence 1 1000 00001246787543322 13699999999654 48999999999886421 25689863 333366
Q ss_pred CeEEcHHHhhcEEEEEeCCCCEEEEEecCCCccc--ccccC
Q 015256 170 TTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELW--RRLQL 208 (410)
Q Consensus 170 ~~ILG~~Fmr~~yVVFD~en~rIGFA~s~C~~~~--~~~p~ 208 (410)
.+|||+.|||++|+|||++|+|||||+++|+... +..++
T Consensus 327 ~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i 367 (383)
T 2ewy_A 327 ALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEI 367 (383)
T ss_dssp CEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSSCBCEEE
T ss_pred cEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCCcceeee
Confidence 8999999999999999999999999999998633 34444
No 7
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=99.91 E-value=3.3e-24 Score=211.99 Aligned_cols=156 Identities=17% Similarity=0.273 Sum_probs=127.7
Q ss_pred CCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhhh
Q 015256 19 SSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHV 98 (410)
Q Consensus 19 ~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~~ 98 (410)
.+.+.|++.|+|+ .+..+|.|+|++|.|||+.+.. +..+||||||++++||+++|++|.+++.+...
T Consensus 177 ~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~g~~~~~-------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~- 243 (334)
T 1j71_A 177 NAKYTGTLTALPV-----TSSVELRVHLGSINFDGTSVST-------NADVVLDSGTTITYFSQSTADKFARIVGATWD- 243 (334)
T ss_dssp TTSEEEEEEEEEC-----CCSSSCEEEEEEEEETTEEEEE-------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-
T ss_pred hHHccCceEEEEc-----cCCCeEEEEEeEEEECCEeccC-------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc-
Confidence 5678899999999 5667999999999999998753 35799999999999999999999999965542
Q ss_pred cccccCCCCCCc-cccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcCCCCeEEcHHH
Q 015256 99 LKRIRGPDPNYD-DICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSDSTTLLGGIV 177 (410)
Q Consensus 99 ~~~~~g~~~~~~-~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~~~~~ILG~~F 177 (410)
.....+. ..|+ .+|+|+|+|.+|.+++|++++|+++..+ +..|++.+... +.+|||+.|
T Consensus 244 -----~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~i~~~~y~~~~~~--~~~C~~~i~~~-~~~iLG~~f 303 (334)
T 1j71_A 244 -----SRNEIYRLPSCD------------LSGDAVFNFDQGVKITVPLSELILKDSD--SSICYFGISRN-DANILGDNF 303 (334)
T ss_dssp -----TTTTEEECSSSC------------CCSEEEEEESTTCEEEEEGGGGEEECSS--SSCEEESEEEC-TTCEECHHH
T ss_pred -----CCCceEEEEcCC------------CCCceEEEEcCCcEEEECHHHheeecCC--CCeeEEEEeEC-CCcEEChHh
Confidence 1111122 4453 3799999998789999999999998643 44699887664 579999999
Q ss_pred hhcEEEEEeCCCCEEEEEecCCCccccccc
Q 015256 178 VRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 207 (410)
Q Consensus 178 mr~~yVVFD~en~rIGFA~s~C~~~~~~~p 207 (410)
||++|+|||++++|||||+++|.+.++..+
T Consensus 304 l~~~y~vfD~~~~~igfA~~~~~~~~~i~~ 333 (334)
T 1j71_A 304 LRRAYIVYDLDDKTISLAQVKYTSSSDISA 333 (334)
T ss_dssp HTTEEEEEETTTTEEEEEEECCCSCCCEEE
T ss_pred hccEEEEEECCCCEEEEEecCCCCccceEE
Confidence 999999999999999999999987555443
No 8
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=99.91 E-value=3.2e-24 Score=216.87 Aligned_cols=176 Identities=20% Similarity=0.387 Sum_probs=134.9
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|.+++|.||++.+.+++..|+ ...+||||||++++||.++|++|.++|.+...
T Consensus 196 d~~~~~g~l~~~p~-----~~~~~w~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~ 269 (402)
T 3vf3_A 196 DHSLYTGSLWYTPI-----RREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS 269 (402)
T ss_dssp CGGGEEEEEEEEEC-----SSBTTBEECEEEEEETTEECCCCGGGGG-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT
T ss_pred CcccccCceEEEeC-----CcCcEEEEEEeEEEECCEEecccccccC-CCeEEEECCCCcccCCHHHHHHHHHHHhhhcc
Confidence 45668899999999 5678999999999999999987655442 46899999999999999999999999988753
Q ss_pred hcccccCC-CCCCccccCCCCccccccccCCCCeEEEEECCCe-----EEEeCCCccEEEEcccC--CceEEE-EEEcCC
Q 015256 98 VLKRIRGP-DPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVS--GAYCLG-IFQNSD 168 (410)
Q Consensus 98 ~~~~~~g~-~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~-----t~tI~p~~Yl~~~~~~~--~~~Cl~-i~~s~~ 168 (410)
. ...... ...+...|+...... +..+|+|+|+|.++. +++|+|++|+.+..+.. ...|++ .+...+
T Consensus 270 ~-~~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~ 344 (402)
T 3vf3_A 270 T-EKFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS 344 (402)
T ss_dssp T-SCCCTTGGGTCSCEEEETTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEES
T ss_pred c-cccCccccccccccccccccch----HhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCCC
Confidence 1 111110 001246777543222 136999999996543 69999999999865421 248996 233336
Q ss_pred CCeEEcHHHhhcEEEEEeCCCCEEEEEecCCCcccc
Q 015256 169 STTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWR 204 (410)
Q Consensus 169 ~~~ILG~~Fmr~~yVVFD~en~rIGFA~s~C~~~~~ 204 (410)
+.+|||+.|||++|+|||++++|||||+++|+..++
T Consensus 345 ~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 380 (402)
T 3vf3_A 345 TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 380 (402)
T ss_dssp SCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCS
T ss_pred CcEEEChHHhCCeEEEEECCCCEEEEEecccCcccC
Confidence 789999999999999999999999999999997543
No 9
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=99.91 E-value=4.2e-24 Score=210.97 Aligned_cols=161 Identities=22% Similarity=0.315 Sum_probs=130.1
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ ....+|.|++++|.||++.+.. +..+||||||++++||+++|++|.+++.+...
T Consensus 178 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~g~~~~~-------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~ 245 (339)
T 3fv3_A 178 DNAKYSGKLVAEQV-----TSSQALTISLASVNLKGSSFSF-------GDGALLDSGTTLTYFPSDFAAQLADKAGARLV 245 (339)
T ss_dssp ETTSBSSCCEEEEB-----CCSSSCEEEEEEEEESSCEEEE-------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEE
T ss_pred chHHeecceEEEec-----ccCccEEEEEEEEEECCEeecC-------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEc
Confidence 46678899999999 5567999999999999998763 25799999999999999999999999975542
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcCCCCeEEcHHH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSDSTTLLGGIV 177 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~~~~~ILG~~F 177 (410)
... .....+...|+. ..+|+|+|+|++|.+++|++++|+++.. ...|+..+.. ++.+|||+.|
T Consensus 246 ~~~---~~~~~~~~~C~~----------~~~p~i~f~f~~g~~~~v~~~~~~~~~~---~~~C~~~i~~-~~~~ilG~~f 308 (339)
T 3fv3_A 246 QVA---RDQYLYFIDCNT----------DTSGTTVFNFGNGAKITVPNTEYVYQNG---DGTCLWGIQP-SDDTILGDNF 308 (339)
T ss_dssp EEE---TTEEEEEECTTC----------CCCSEEEEEETTSCEEEEEGGGGEEECS---SSCEEESEEE-CSSCEECHHH
T ss_pred ccc---ccCceEEEecCC----------CCCCcEEEEECCCCEEEECHHHheeeCC---CCeEEEEEEe-CCcEEeChHH
Confidence 110 011123445642 3589999999778999999999998753 4679766665 6789999999
Q ss_pred hhcEEEEEeCCCCEEEEEecCCCccccccc
Q 015256 178 VRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 207 (410)
Q Consensus 178 mr~~yVVFD~en~rIGFA~s~C~~~~~~~p 207 (410)
||++|+|||++++|||||+++|++.++..+
T Consensus 309 l~~~y~vfD~~~~~igfA~~~~~~~s~i~~ 338 (339)
T 3fv3_A 309 LRHAYLLYNLDANTISIAQVKYTTDSSISA 338 (339)
T ss_dssp HTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred HhCEEEEEECCCCEEEEEecCCCCccceEE
Confidence 999999999999999999999997665554
No 10
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=99.91 E-value=4.2e-24 Score=211.65 Aligned_cols=162 Identities=20% Similarity=0.311 Sum_probs=128.8
Q ss_pred CCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhhh
Q 015256 19 SSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHV 98 (410)
Q Consensus 19 ~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~~ 98 (410)
.+.+.|++.|+|+ .+..+|.|+|++|.|||+.+.. +..+||||||++++||+++|++|.+++.+....
T Consensus 177 ~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~g~~~~~-------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~ 244 (342)
T 2qzx_A 177 KAKYSGSLVDLPI-----TSEKKLTVGLRSVNVRGRNVDA-------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF 244 (342)
T ss_dssp TTSBSSCCEEEEC-----CCSSSCEEEEEEEEETTEEEEE-------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE
T ss_pred hhhEecceEEEec-----cCCceEEEEEeEEEECCEecCC-------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee
Confidence 5677899999999 5667999999999999998753 357999999999999999999999999765421
Q ss_pred cccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEc---ccCCceEEEEEEcCCCCeEEcH
Q 015256 99 LKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM---KVSGAYCLGIFQNSDSTTLLGG 175 (410)
Q Consensus 99 ~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~---~~~~~~Cl~i~~s~~~~~ILG~ 175 (410)
.. .....+.. +|. .+|+|+|+|.+|.+++|++++|+++.. ...+..|++.+... +.+|||+
T Consensus 245 -~~--~~~~~~~~--------~C~----~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-~~~iLG~ 308 (342)
T 2qzx_A 245 -DS--AGNKVYVA--------DCK----TSGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-EDNILGD 308 (342)
T ss_dssp -CT--TSCEEEEE--------CTT----CCCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-SSCEECH
T ss_pred -cc--CCCcEEEE--------ECC----CCCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC-CCcEeCh
Confidence 00 00001223 342 379999999878999999999998743 11246899988764 5799999
Q ss_pred HHhhcEEEEEeCCCCEEEEEecCCCcccccccC
Q 015256 176 IVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQL 208 (410)
Q Consensus 176 ~Fmr~~yVVFD~en~rIGFA~s~C~~~~~~~p~ 208 (410)
.|||++|+|||++++|||||+++|.+.++..++
T Consensus 309 ~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 341 (342)
T 2qzx_A 309 NFLRSAYVVYNLDDKKISMAPVKYTSESDIVAI 341 (342)
T ss_dssp HHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred HhhhcEEEEEECCCCEEEEEeeCCCCCCCeEEc
Confidence 999999999999999999999999876665554
No 11
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=99.91 E-value=4.7e-24 Score=219.73 Aligned_cols=175 Identities=21% Similarity=0.388 Sum_probs=135.7
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..||.|.+++|.||++.+.+++..|+ ...+||||||++++||+++|++|.++|.+...
T Consensus 242 d~~~~~g~l~~~p~-----~~~~~w~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~ 315 (455)
T 3lpj_A 242 DHSLYTGSLWYTPI-----RREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS 315 (455)
T ss_dssp CGGGEEEEEEEEEC-----CSBTTBBCCEEEEEETTEECCCCGGGGG-SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT
T ss_pred CcccccCceEEEec-----CCCceeEEEEeEEEECCEEccccccccC-CCeEEEECCCcceeCCHHHHHHHHHHhhhhcc
Confidence 46678899999999 5678999999999999999987655442 46899999999999999999999999988753
Q ss_pred hcccccC-CCCCCccccCCCCccccccccCCCCeEEEEECCCe-----EEEeCCCccEEEEcccC--CceEEEE-EEcCC
Q 015256 98 VLKRIRG-PDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVS--GAYCLGI-FQNSD 168 (410)
Q Consensus 98 ~~~~~~g-~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~-----t~tI~p~~Yl~~~~~~~--~~~Cl~i-~~s~~ 168 (410)
. ..... ....+...|+.....+ +..+|+|+|+|.++. +|+|+|++|+++..+.. ...|+++ ....+
T Consensus 316 ~-~~~~~~~~~g~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~ 390 (455)
T 3lpj_A 316 T-EKFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS 390 (455)
T ss_dssp T-SCCCHHHHTTCSCEEESTTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES
T ss_pred c-cccCcccccCcceecccccCCc----hhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCC
Confidence 1 11100 0012246787654322 136999999996543 69999999999876422 2589973 22236
Q ss_pred CCeEEcHHHhhcEEEEEeCCCCEEEEEecCCCccc
Q 015256 169 STTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELW 203 (410)
Q Consensus 169 ~~~ILG~~Fmr~~yVVFD~en~rIGFA~s~C~~~~ 203 (410)
+.+|||+.|||++|+|||++|+|||||+++|+..+
T Consensus 391 ~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 425 (455)
T 3lpj_A 391 TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 425 (455)
T ss_dssp SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred CcEEEChHHhCCeEEEEECCCCEEEEEeccccccc
Confidence 78999999999999999999999999999998765
No 12
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=99.91 E-value=4.3e-24 Score=210.87 Aligned_cols=164 Identities=20% Similarity=0.293 Sum_probs=127.8
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|+|++|.||++.+..+ +..+||||||++++||+++|++|.++|.+...
T Consensus 175 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~g~~~~~~------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~ 243 (342)
T 3pvk_A 175 DNAKYSGSLIALPV-----TSDRELRISLGSVEVSGKTINTD------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLT 243 (342)
T ss_dssp ETTSBSSCCEEEEC-----CCSSSCEEEEEEEEETTEEEEEE------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEE
T ss_pred CccceeeeeEEeec-----CccceEEEEEeEEEECCEEecCC------CceEEEeCCCCCeecCHHHHHHHHHHcCCeec
Confidence 45678899999999 55679999999999999988642 35799999999999999999999999965542
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCC---ceEEEEEEcCCCCeEEc
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSG---AYCLGIFQNSDSTTLLG 174 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~---~~Cl~i~~s~~~~~ILG 174 (410)
.. ..+ ...+...|+ ..|+|+|+|.+|.+++|++++|+++.....+ ..|++.+.. ++.+|||
T Consensus 244 ~~--~~~-~~~~~~~C~------------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~-~~~~ilG 307 (342)
T 3pvk_A 244 QD--SNG-NSFYEVDCN------------LSGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDV-NDANILG 307 (342)
T ss_dssp EC--TTS-CEEEEECSC------------CCSEEEEEESTTCEEEEEGGGGEEC----------CEEESEEE-CTTCEEC
T ss_pred cc--CCC-ceEEEEecC------------CCCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEee-CCCeEeC
Confidence 10 000 001333443 3599999997689999999999987432122 689988876 5789999
Q ss_pred HHHhhcEEEEEeCCCCEEEEEecCCCcccccccC
Q 015256 175 GIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQL 208 (410)
Q Consensus 175 ~~Fmr~~yVVFD~en~rIGFA~s~C~~~~~~~p~ 208 (410)
+.|||++|+|||++++|||||+++|++.++.+++
T Consensus 308 ~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~i 341 (342)
T 3pvk_A 308 DNFLRSAYIVYDLDDNEISLAQVKYTSASSISAL 341 (342)
T ss_dssp HHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred HHHHhcEEEEEECCCCEEEEEecCCCCCCCEEEe
Confidence 9999999999999999999999999976665554
No 13
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=209.97 Aligned_cols=156 Identities=25% Similarity=0.436 Sum_probs=121.7
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|.|++|.||++.+.. ..+..+||||||++++||.++|++|.+++.+...
T Consensus 184 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~~~~~~~-----~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~ 253 (351)
T 1tzs_A 184 DHSHFSGSLNWVPV-----TKQAYWQIALDNIQVGGTVMFC-----SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV 253 (351)
T ss_dssp CGGGBCSCCEEEEC-----SEETTEEEEEEEEEETTEEEEC-----TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC
T ss_pred CHHHcCCceEEEec-----CCCceEEEEeCEEEECCceEEc-----CCCceEEeccCCcceeCCHHHHHHHHHHhCCccc
Confidence 34567899999999 4568999999999999988642 2356899999999999999999999999854321
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC------CCCe
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTT 171 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~------~~~~ 171 (410)
. ..+...|+ .. ..+|+|+|+| +|.+++|++++|+++....+...|+..+... .+.+
T Consensus 254 ------~--g~~~~~C~--------~~-~~~P~i~f~f-~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 315 (351)
T 1tzs_A 254 ------D--GEYAVECA--------NL-NVMPDVTFTI-NGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLW 315 (351)
T ss_dssp ------S--SSEEECGG--------GG-GGSCCEEEEE-TTEEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCE
T ss_pred ------C--CeEEEeCC--------CC-ccCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeE
Confidence 0 12334554 32 4689999999 7999999999999876532346899766432 4689
Q ss_pred EEcHHHhhcEEEEEeCCCCEEEEEecCCCc
Q 015256 172 LLGGIVVRNTLVTYDRGNDKVGFWKTNCSE 201 (410)
Q Consensus 172 ILG~~Fmr~~yVVFD~en~rIGFA~s~C~~ 201 (410)
|||+.|||++|+|||++++|||||+++|.+
T Consensus 316 iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 316 ILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp EECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred EEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 999999999999999999999999999976
No 14
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=212.99 Aligned_cols=152 Identities=21% Similarity=0.352 Sum_probs=123.0
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..||.|+|++|.||++.+. +..+..+||||||+++++|.++|++|.++|.+..
T Consensus 225 d~~~y~G~l~~~pv-----~~~~~w~v~l~~i~v~~~~~~-----~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~- 293 (383)
T 2x0b_A 225 DPQHYEGNFHYINL-----IKTGVWQIQMKGVSVGSSTLL-----CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK- 293 (383)
T ss_dssp CGGGEEEEEEEEEB-----SSTTSCEEEECEEEESSCCCB-----STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-
T ss_pred ChHHcCCceEEEEc-----CCCceEEEEEeEEEeCCceEE-----cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-
Confidence 45667899999999 567899999999999998753 2245789999999999999999999999985432
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC------CCCe
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTT 171 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~------~~~~ 171 (410)
..+ .+...|+ .. ..+|+|+|+| +|.+|+|++++|+++..+.++..|+..+... ++.|
T Consensus 294 ----~~g---~~~v~C~--------~~-~~~P~i~f~~-~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 356 (383)
T 2x0b_A 294 ----RLF---DYVVKCN--------EG-PTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTW 356 (383)
T ss_dssp ----CSS---CEEEEGG--------GT-TTCCCEEEEE-TTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCE
T ss_pred ----cCC---cEEEecc--------cc-ccCceEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcE
Confidence 111 2334554 33 4799999999 7999999999999876543356999755432 4689
Q ss_pred EEcHHHhhcEEEEEeCCCCEEEEEec
Q 015256 172 LLGGIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 172 ILG~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
|||+.|||++|+|||++|+|||||++
T Consensus 357 ILGd~Fl~~~y~vfD~~~~rIGfA~a 382 (383)
T 2x0b_A 357 ALGATFIRKFYTEFDRRNNRIGFALA 382 (383)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEChHHhcceEEEEECCCCEEeEEEc
Confidence 99999999999999999999999986
No 15
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=99.90 E-value=4e-23 Score=203.30 Aligned_cols=150 Identities=24% Similarity=0.424 Sum_probs=121.8
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|+|++|.||++.+..+ .+..+||||||++++||.++|++|.+++.+...
T Consensus 172 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~ 241 (323)
T 3cms_A 172 DPSYYTGSLHWVPV-----TVQQYWQFTVDSVTISGVVVACE-----GGCQAILDTGTSKLVGPSSDILNIQQAIGATQN 241 (323)
T ss_dssp CGGGEEEEEEEEEC-----SSBTTBEEEEEEEEETTEEEEST-----TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE
T ss_pred ChhhccCceEEEEC-----ccCCeEEEEEeeEEECCEEeecC-----CCcEEEEecCCccEeCCHHHHHHHHHHhCCeec
Confidence 45567899999999 55789999999999999987532 356899999999999999999999999854321
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC--CCCeEEcH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLGG 175 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~--~~~~ILG~ 175 (410)
....+...|+. . ..+|+|+|+| +|.+++|++++|+++ . ...|+..+... ++.+|||+
T Consensus 242 -------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~-~---~~~C~~~i~~~~~~~~~iLG~ 300 (323)
T 3cms_A 242 -------QYGEFDIDCDN--------L-SYMPTVVFEI-NGKMYPLTPSAYTSQ-D---QGFCTSGFQSENHSQKWILGD 300 (323)
T ss_dssp -------TTTEEEECTTC--------T-TTSCCEEEEE-TTEEEEECHHHHEEE-E---TTEEEESEEEC---CCEEECH
T ss_pred -------CCCcEEEECCC--------C-ccCceEEEEE-CCEEEEECHHHhccC-C---CCEEEEEEEeCCCCCcEEECH
Confidence 01123345652 2 4689999999 799999999999998 2 57899866543 57899999
Q ss_pred HHhhcEEEEEeCCCCEEEEEecC
Q 015256 176 IVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 176 ~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
.|||++|+|||++++|||||+++
T Consensus 301 ~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 301 VFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhhceEEEEECCCCEEEEEECC
Confidence 99999999999999999999863
No 16
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=99.89 E-value=1.4e-22 Score=199.77 Aligned_cols=149 Identities=21% Similarity=0.411 Sum_probs=120.1
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|.|++|.||++.+.. .+..+||||||++++||+++|++|.+++.+..
T Consensus 175 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~~~~~~~------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~- 242 (329)
T 1dpj_A 175 DESKFKGDITWLPV-----RRKAYWEVKFEGIGLGDEYAEL------ESHGAAIDTGTSLITLPSGLAEMINAEIGAKK- 242 (329)
T ss_dssp CGGGEEEEEEEEEC-----SSBTTBEEEEEEEEETTEEEEC------SSCEEEECTTCSCEEECHHHHHHHHHHHTCEE-
T ss_pred ChhhcCCceEEEEc-----CCCceEEEEeeeEEECCeEecC------CCccEEeeCCCCcEECCHHHHHHHHHHhCCcc-
Confidence 35567899999999 5678999999999999998753 34689999999999999999999999985431
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC------CCCe
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTT 171 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~------~~~~ 171 (410)
.....+.. +|... ..+|+|+|+| +|.+++|++++|+++.. ..|+..+... ++.+
T Consensus 243 ------~~~g~~~~--------~C~~~-~~~P~i~f~f-~g~~~~i~~~~y~~~~~----~~C~~~~~~~~~~~~~~~~~ 302 (329)
T 1dpj_A 243 ------GWTGQYTL--------DCNTR-DNLPDLIFNF-NGYNFTIGPYDYTLEVS----GSCISAITPMDFPEPVGPLA 302 (329)
T ss_dssp ------CTTSSEEE--------CGGGG-GGCCCEEEEE-TTEEEEECTTTSEEEET----TEEEECEEECCCCTTTCSEE
T ss_pred ------CCCCeEEE--------ECCCC-CcCCcEEEEE-CCEEEEECHHHhEecCC----CEEEEEEEecccCCCCCCcE
Confidence 11112222 34332 4799999999 68999999999999753 5899755432 4689
Q ss_pred EEcHHHhhcEEEEEeCCCCEEEEEecC
Q 015256 172 LLGGIVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 172 ILG~~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
|||+.|||++|+|||++|+|||||+++
T Consensus 303 iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 303 IVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEChHHhcceEEEEECCCCEEEEEECC
Confidence 999999999999999999999999863
No 17
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=99.89 E-value=4.2e-23 Score=203.50 Aligned_cols=153 Identities=16% Similarity=0.311 Sum_probs=120.3
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+. .+..+|.|+|++|.||++.+. ..+..+||||||++++||+++|++|.++|.....
T Consensus 170 d~~~~~g~l~~~p~~----~~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 170 DDSKYTGSITYTDAD----SSQGYWGFSTDGYSIGDGSSS------SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp CGGGBSSCCEEEECB----CTTSSCEEEECEEEETTSCCB------SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ChhhccCceEEEEcC----CCCceEEEEECcEEECCeecc------CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 456678999999992 357899999999999998763 1356899999999999999999999888732211
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC--CCCeEEcH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLGG 175 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~--~~~~ILG~ 175 (410)
. .....+...|+ ..+|+|+|+| +|.+++|++++|++...+.+...|++.+... .+.+|||+
T Consensus 240 --~---~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iLG~ 302 (325)
T 1ibq_A 240 --S---YEAGGYVFSCS-----------TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSILGD 302 (325)
T ss_dssp --C---SSSSSCEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEECTTTCSEEECH
T ss_pred --c---CcCCeEEEEcC-----------CCCCcEEEEE-CCEEEEECHHHhcccccCCCCCeEEEEEEcCCCCCceEECh
Confidence 0 01112223453 3689999999 7999999999999876422247999977654 47899999
Q ss_pred HHhhcEEEEEeCCCCEEEEEec
Q 015256 176 IVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 176 ~Fmr~~yVVFD~en~rIGFA~s 197 (410)
.|||++|+|||++|+|||||++
T Consensus 303 ~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 303 VFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp HHHTTEEEEEETTTTEEEEEEB
T ss_pred HHhcCEEEEEECCCCEEEeeeC
Confidence 9999999999999999999986
No 18
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=99.89 E-value=8.3e-23 Score=200.12 Aligned_cols=150 Identities=25% Similarity=0.466 Sum_probs=121.9
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|++++|.||++.+..+ .+..+||||||++++||+++|++|.+++.+...
T Consensus 169 d~~~~~g~l~~~p~-----~~~~~w~v~l~~i~v~~~~~~~~-----~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~ 238 (320)
T 4aa9_A 169 DPSYYTGSLHWVPV-----TLQQYWQFTVDSVTINGVAVACV-----GGCQAILDTGTSVLFGPSSDILKIQMAIGATEN 238 (320)
T ss_dssp CGGGEEEEEEEEEC-----SSBTTBEEEECEEEETTEEEEST-----TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC
T ss_pred CHHHccCceEEEEc-----ccCCceEEEEeEEEECCEEeccC-----CCcEEEEECCCCcEECCHHHHHHHHHHhCCccc
Confidence 45668899999999 56789999999999999988642 356899999999999999999999998854321
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC--CCCeEEcH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLGG 175 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~--~~~~ILG~ 175 (410)
....+...|. .. ..+|+|+|+| +|.+++|++++|+.+. +..|+..+... ++.+|||+
T Consensus 239 -------~~g~~~~~C~--------~~-~~~p~i~f~f-~g~~~~l~~~~y~~~~----~~~C~~~i~~~~~~~~~ilG~ 297 (320)
T 4aa9_A 239 -------RYGEFDVNCG--------NL-RSMPTVVFEI-NGRDYPLSPSAYTSKD----QGFCTSGFQGDNNSELWILGD 297 (320)
T ss_dssp -------TTSCEEECGG--------GG-GGCCCEEEEE-TTEEEEECHHHHEEEE----TTEEEESEEEETTCCCEEECH
T ss_pred -------CCCcEEEeCC--------CC-CcCceEEEEE-CCEEEEECHHHhccCC----CCeEEEEEEcCCCCCcEEECh
Confidence 1112334454 33 4789999999 7999999999999762 57899765443 46799999
Q ss_pred HHhhcEEEEEeCCCCEEEEEecC
Q 015256 176 IVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 176 ~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
.|||++|+|||++++|||||+++
T Consensus 298 ~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 298 VFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhcceEEEEECCCCEEEEEecC
Confidence 99999999999999999999863
No 19
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=99.89 E-value=2.4e-23 Score=207.67 Aligned_cols=159 Identities=16% Similarity=0.291 Sum_probs=125.5
Q ss_pred CCCCceeeeeeEEccCcCCCCCC----cEEEEEeEEEECCEEeecCCccccCCCcEE-EecCCcceecCHHHHHHHHHHH
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSP----YYNIELKELRVAGKPLKVSPRIFDGGHGTV-LDSGTTYAYLPGHAFAAFKDAL 92 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~----yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aI-IDSGTT~t~LP~~vy~aIi~aI 92 (410)
+.+.+.|++.|+|+. +.. +|.|.|++|.||++.+.. ..+..+| |||||++++||.++|++|.+++
T Consensus 188 d~~~~~g~l~~~p~~-----~~~~~~~~~~v~l~~i~v~~~~~~~-----~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~ 257 (361)
T 1mpp_A 188 NNTLLGGDIQYTDVL-----KSRGGYFFWDAPVTGVKIDGSDAVS-----FDGAQAFTIDTGTNFFIAPSSFAEKVVKAA 257 (361)
T ss_dssp CGGGBSSCCEEEECE-----EETTEEEEEEEEEEEEEETTEEEEE-----EEEEEEEEEETTCCSEEEEHHHHHHHHHHH
T ss_pred ChhhcCCceEEEEcc-----cCCCceeEEEEEEeEEEECCeeecc-----CCCCEEEEECCCCCceeCCHHHHHHHHHHh
Confidence 345678999999993 333 999999999999988742 1346899 9999999999999999999998
Q ss_pred HHhhhhcccccCCCCCCccccCCCCccccccccCCC-CeEEEEEC-C-----CeEEEeCCCccEEEEcccCCceEEEEEE
Q 015256 93 IKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTF-PQVDMVFG-N-----GQKLTLSPENYLFRHMKVSGAYCLGIFQ 165 (410)
Q Consensus 93 ~~~~~~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~-PtItf~F~-g-----G~t~tI~p~~Yl~~~~~~~~~~Cl~i~~ 165 (410)
.+... ...+ .+...|+ .. ..+ |+|+|+|. + |.+|+|++++|+++... +...|+..+.
T Consensus 258 ~~~~~---~~~g---~~~~~C~--------~~-~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~-~~~~C~~~i~ 321 (361)
T 1mpp_A 258 LPDAT---ESQQ---GYTVPCS--------KY-QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDK-SGETCMFIVL 321 (361)
T ss_dssp CTTCE---EETT---EEEEEHH--------HH-TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSS-SSCEEEESEE
T ss_pred CCccc---CCCC---cEEEECC--------Cc-ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCC-CCCeeEEEEE
Confidence 65431 1111 2334564 32 356 99999993 3 89999999999998653 3568996555
Q ss_pred c-CCCCeEEcHHHhhcEEEEEeCCCCEEEEEecCCCcc
Q 015256 166 N-SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 202 (410)
Q Consensus 166 s-~~~~~ILG~~Fmr~~yVVFD~en~rIGFA~s~C~~~ 202 (410)
. .++.+|||+.|||++|+|||++++|||||+++|+..
T Consensus 322 ~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 322 PDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp EESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred eCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 4 467899999999999999999999999999999863
No 20
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=99.89 E-value=8.9e-23 Score=212.39 Aligned_cols=169 Identities=21% Similarity=0.418 Sum_probs=129.4
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhh-
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKET- 96 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~- 96 (410)
+.+.+.|++.|+|+ .+..||.|+|++|.||++.+.++. ++..+|||||||+++||.++|++|.++|.+..
T Consensus 214 d~~~~~G~l~~~pv-----~~~~~w~v~l~~i~v~g~~~~~~~----~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~ 284 (478)
T 1qdm_A 214 DPKHYVGEHTYVPV-----TQKGYWQFDMGDVLVGGKSTGFCA----GGCAAIADSGTSLLAGPTAIITEINEKIGAAGV 284 (478)
T ss_dssp CTTSEEEEEEEEEE-----EEETTEEEEECCEEETTEECSTTT----TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCB
T ss_pred CHhhcCCCceEEec-----cCCCeEEEEEeEEEECCEEEeecC----CCceEEEcCCCCceeCCHHHHHHHHHHhCcccc
Confidence 45678899999999 457899999999999999876532 35689999999999999999999999986421
Q ss_pred ---------hhc---------cc------------c--cCC-----------CC--------------------------
Q 015256 97 ---------HVL---------KR------------I--RGP-----------DP-------------------------- 107 (410)
Q Consensus 97 ---------~~~---------~~------------~--~g~-----------~~-------------------------- 107 (410)
..+ .. . .+. +.
T Consensus 285 ~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~ 364 (478)
T 1qdm_A 285 VSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQN 364 (478)
T ss_dssp CCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHH
Confidence 000 00 0 000 00
Q ss_pred -------------CCccccCCC------CccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC-
Q 015256 108 -------------NYDDICFSG------AGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS- 167 (410)
Q Consensus 108 -------------~~~~~Cy~~------s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~- 167 (410)
...+.|+.. +..+|+.+ ..+|+|+|+| +|++|+|+|++|+++..++....|++.+...
T Consensus 365 ~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~ 442 (478)
T 1qdm_A 365 QLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL-GSMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMD 442 (478)
T ss_dssp HHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECC
T ss_pred HHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc-cccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEecc
Confidence 002456643 24678765 5899999999 7999999999999987543356899866532
Q ss_pred -----CCCeEEcHHHhhcEEEEEeCCCCEEEEEec
Q 015256 168 -----DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 168 -----~~~~ILG~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
++.||||+.|||++|+|||++|+|||||++
T Consensus 443 ~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 443 IPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp CCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 467999999999999999999999999985
No 21
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=99.89 E-value=7.7e-23 Score=202.23 Aligned_cols=151 Identities=17% Similarity=0.371 Sum_probs=121.7
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|+|++|.||++.+. ..+..+|||||||+++||+++|++|.+++.+...
T Consensus 176 d~~~~~g~l~~~p~-----~~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~ 244 (330)
T 1yg9_A 176 DWKYVDGEFTYVPL-----VGDDSWKFRLDGVKIGDTTVA------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE 244 (330)
T ss_dssp CGGGEEEEEEEEEB-----SCTTSCCEECSEEEETTEEEE------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE
T ss_pred CHHHccCceEEEEC-----CCCCEEEEEeCeEEECCEEEc------CCCcEEEEecCCccccCCHHHHHHHHHHhCCccc
Confidence 45667899999999 567899999999999998874 1356899999999999999999999999854421
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEc-C-CCCeEEcH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQN-S-DSTTLLGG 175 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s-~-~~~~ILG~ 175 (410)
..+. ..+ | ..+|... ..+|+|+|+| +|.+++|++++|+++. +..|+..+.. . .+.+|||+
T Consensus 245 ----~~g~-~~~---~----~~~C~~~-~~~p~i~f~f-gg~~~~l~~~~y~~~~----~~~C~~~i~~~~~~~~~ilG~ 306 (330)
T 1yg9_A 245 ----KTTT-RRI---C----KLDCSKI-PSLPDVTFVI-NGRNFNISSQYYIQQN----GNLCYSGFQPCGHSDHFFIGD 306 (330)
T ss_dssp ----ECSS-CEE---E----EECGGGG-GGSCCEEEEE-TTEEEEECHHHHEEEE----TTEEEESEEEETTCSSEEECH
T ss_pred ----CCCc-eEE---E----EEECCCc-cccCcEEEEE-CCEEEEECHHHhcccC----CCcEEEEEEeCCCCCeEEecH
Confidence 1110 012 1 2344433 4689999999 7999999999999976 4689976654 2 56899999
Q ss_pred HHhhcEEEEEeCCCCEEEEEec
Q 015256 176 IVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 176 ~Fmr~~yVVFD~en~rIGFA~s 197 (410)
.|||++|+|||++|+|||||++
T Consensus 307 ~fl~~~y~vfD~~~~riGfA~~ 328 (330)
T 1yg9_A 307 FFVDHYYSEFNWENKTMGFGRS 328 (330)
T ss_dssp HHHTTEEEEEETTTTEEEEEEE
T ss_pred HHhhheEEEEECCCCEEEEEEC
Confidence 9999999999999999999986
No 22
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=99.89 E-value=1.3e-22 Score=204.49 Aligned_cols=149 Identities=22% Similarity=0.371 Sum_probs=121.3
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|.++ |.||++.+ .+..+||||||++++||.++|++|.+++.+...
T Consensus 222 d~~~~~g~l~~~p~-----~~~~~w~v~l~-i~v~g~~~--------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~ 287 (375)
T 1miq_A 222 EEKFYEGNITYEKL-----NHDLYWQIDLD-VHFGKQTM--------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV 287 (375)
T ss_dssp CGGGEEEEEEEEEB-----SSSSSSEEEEE-EEETTEEE--------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC
T ss_pred CHHHcCCceEEEec-----CCCceEEEEEE-EEECCEEc--------ccceEEecCCCccEEcCHHHHHHHHHHhCCccc
Confidence 34567899999999 56789999999 99999887 135799999999999999999999999865421
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcCC---CCeEEc
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSD---STTLLG 174 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~~---~~~ILG 174 (410)
. ....+...|+. ..+|+|+|+| +|.+|+|++++|+++....+...|+..+...+ +.+|||
T Consensus 288 ---~---~~g~~~~~C~~----------~~~P~i~f~f-~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG 350 (375)
T 1miq_A 288 ---P---FLPFYVTTCDN----------KEMPTLEFKS-ANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILG 350 (375)
T ss_dssp ---T---TSSCEEEETTC----------TTCCCEEEEC-SSCEEEECGGGSEEESSSSSCSEEEESEEECCSSSSEEEEC
T ss_pred ---C---CCCeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCcEEEC
Confidence 1 11124456652 3689999999 79999999999999865323469996665543 789999
Q ss_pred HHHhhcEEEEEeCCCCEEEEEec
Q 015256 175 GIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 175 ~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
+.|||++|+|||++++|||||++
T Consensus 351 ~~fl~~~yvvfD~~~~riGfA~~ 373 (375)
T 1miq_A 351 DPFMRKYFTVFDYDKESVGFAIA 373 (375)
T ss_dssp HHHHHHEEEEEETTTTEEEEEEE
T ss_pred HHHhccEEEEEECCCCEEEEEEc
Confidence 99999999999999999999986
No 23
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=99.88 E-value=1.1e-22 Score=200.84 Aligned_cols=153 Identities=20% Similarity=0.354 Sum_probs=124.0
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|.+++|.||++.+.. ..+..+||||||++++||+++|++|.+++.+...
T Consensus 182 d~~~~~g~l~~~p~-----~~~~~w~v~l~~i~v~~~~~~~-----~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~ 251 (341)
T 3k1w_A 182 DPQHYEGNFHYINL-----IKTGVWQIQMKGVSVGSSTLLC-----EDGCLALVDTGASYISGSTSSIEKLMEALGAKKR 251 (341)
T ss_dssp CGGGEEEEEEEEEC-----SSTTSCEEEECCEEETTEEEEC-----TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC
T ss_pred ChHHccCceEEEec-----CCCCEEEEEEeEEEECCEEeec-----CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec
Confidence 45668899999999 5678999999999999997643 2356899999999999999999999999854321
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEc-----C-CCCe
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQN-----S-DSTT 171 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s-----~-~~~~ 171 (410)
.. .+.. +|+.. ..+|+|+|+| +|.+++|++++|++.....++..|+..+.. . .+.+
T Consensus 252 -------~~-g~~~--------~C~~~-~~~p~i~f~f-~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~ 313 (341)
T 3k1w_A 252 -------LF-DYVV--------KCNEG-PTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTW 313 (341)
T ss_dssp -------SS-CEEE--------EGGGG-GGCCCEEEEE-TTEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCE
T ss_pred -------CC-CeEE--------eCCCC-CcCCcEEEEE-CCEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeE
Confidence 01 1223 44433 4789999999 699999999999987654346799976654 2 4689
Q ss_pred EEcHHHhhcEEEEEeCCCCEEEEEecC
Q 015256 172 LLGGIVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 172 ILG~~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
|||+.|||++|+|||++++|||||+++
T Consensus 314 iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 314 ALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999999999999999999999999874
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=99.88 E-value=1.3e-22 Score=199.96 Aligned_cols=151 Identities=14% Similarity=0.258 Sum_probs=119.4
Q ss_pred CCCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhh
Q 015256 17 DHSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKET 96 (410)
Q Consensus 17 ~~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~ 96 (410)
.+.+.+.|++.|+|+. .+..+|.|++++|.||+ .+. ..+..+|||||||+++||+++|++|.++|....
T Consensus 170 ~d~~~~~g~l~~~p~~----~~~~~w~v~l~~i~v~~-~~~------~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~ 238 (323)
T 1izd_A 170 TDSSKYTGSITYTDVD----NSQGFWGFTADGYSIGS-DSS------SDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS 238 (323)
T ss_dssp CCTTSEEEEEEEEECB----CTTSSCEEEESEEEETT-EEE------CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred cCccccccceEEEECC----CCCceEEEEECeEEECC-ccc------CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE
Confidence 3456788999999992 35789999999999999 542 235689999999999999999999988873221
Q ss_pred hhcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC--CCCeEEc
Q 015256 97 HVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLG 174 (410)
Q Consensus 97 ~~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~--~~~~ILG 174 (410)
. . .....+...|+ ..+|+|+|+| +|.+++|++++|++... ++..|++.+... .+.+|||
T Consensus 239 ~--~---~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~~~--~~~~C~~~i~~~~~~~~~IlG 299 (323)
T 1izd_A 239 Y--D---SSQGGYVFPSS-----------ASLPDFSVTI-GDYTATVPGEYISFADV--GNGQTFGGIQSNSGIGFSIFG 299 (323)
T ss_dssp E--E---TTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEEEC--STTEEEESEEECTTTSSEEEC
T ss_pred E--c---CcCCEEEEECC-----------CCCceEEEEE-CCEEEecCHHHeEEecC--CCCeEEEEEEcCCCCCcEEEC
Confidence 1 0 00112223453 3689999999 79999999999998764 367999966553 5789999
Q ss_pred HHHhhcEEEEEeCCCCEEEEEec
Q 015256 175 GIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 175 ~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
+.|||++|+|||++|+|||||++
T Consensus 300 ~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 300 DVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp HHHHTTEEEEEETTTTEEEEEEE
T ss_pred hHHhcCEEEEEECCCCEEEEeeC
Confidence 99999999999999999999985
No 25
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=99.88 E-value=9.8e-23 Score=201.21 Aligned_cols=153 Identities=17% Similarity=0.346 Sum_probs=119.6
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+. .+..+|.|+|++|.||++.+. . ....+||||||++++||+++|++|.++|.....
T Consensus 175 d~~~~~g~l~~~p~~----~~~~~~~v~l~~i~v~~~~~~--~----~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~ 244 (329)
T 3c9x_A 175 DTSVAKGPVAYTPVD----NSQGFWEFTASGYSVGGGKLN--R----NSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY 244 (329)
T ss_dssp CGGGCSSCEEEEECB----CTTSSCEEEECCEEETTCCCC--S----CCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE
T ss_pred ChhhcccceEEEEcc----CCCceEEEEEeeEEECCEecc--C----CCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE
Confidence 355678999999992 356799999999999998763 1 346899999999999999999999887732211
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC--CCCeEEcH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLGG 175 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~--~~~~ILG~ 175 (410)
. .....+...|+ ..+|+|+|+| +|.+++|++++|++...+.+...|++.+... .+.+|||+
T Consensus 245 --~---~~~~~~~~~C~-----------~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~ILG~ 307 (329)
T 3c9x_A 245 --D---NQQEGVVFDCD-----------EDLPSFSFGV-GSSTITIPGDLLNLTPLEEGSSTCFGGLQSSSGIGINIFGD 307 (329)
T ss_dssp --E---TTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECGGGGEEEESSTTCSEEEESEEECTTTTSEEECH
T ss_pred --c---CCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeeeeccCCCCCeEEEEEEcCCCCCcEEECh
Confidence 1 11112233454 3689999999 5999999999999876432347999976544 47899999
Q ss_pred HHhhcEEEEEeCCCCEEEEEec
Q 015256 176 IVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 176 ~Fmr~~yVVFD~en~rIGFA~s 197 (410)
.|||++|+|||++|+|||||+.
T Consensus 308 ~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 308 VALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp HHHTTEEEEEETTTTEEEEEEC
T ss_pred HHhccEEEEEECCCCEEeEecC
Confidence 9999999999999999999973
No 26
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=99.88 E-value=1.4e-22 Score=199.77 Aligned_cols=150 Identities=23% Similarity=0.454 Sum_probs=120.6
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|+|++|.||++.+.. ...+..+||||||++++||+++|++|.+++.+...
T Consensus 172 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~~~~~~~----~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~ 242 (329)
T 1htr_B 172 DSSLYTGQIYWAPV-----TQELYWQIGIEEFLIGGQASGW----CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED 242 (329)
T ss_dssp CGGGEEEEEEEEEB-----CSSSSCEEEECEEEETTEECCT----TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC
T ss_pred CHHHcCCceEEEEC-----CCCceEEEEEeEEEECCceeee----cCCCceEEEecCCccEECCHHHHHHHHHHhCCeec
Confidence 34567899999999 5678999999999999988642 12356899999999999999999999999854331
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC------CC-C
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DS-T 170 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~------~~-~ 170 (410)
....+...|+ .. ..+|+|+|+| +|.+++|++++|+++.. ..|+..+... ++ .
T Consensus 243 -------~~g~~~~~C~--------~~-~~~P~i~f~f-~g~~~~i~~~~y~~~~~----g~C~~~~~~~~~~~~~~~~~ 301 (329)
T 1htr_B 243 -------EYGQFLVNCN--------SI-QNLPSLTFII-NGVEFPLPPSSYILSNN----GYCTVGVEPTYLSSQNGQPL 301 (329)
T ss_dssp -------TTSCEEECGG--------GG-GGSCCEEEEE-TTEEEEECHHHHEEECS----SCEEESEEEECCCCTTSSCE
T ss_pred -------CCCeEEEeCC--------Cc-ccCCcEEEEE-CCEEEEECHHHhcccCC----CEEEEEEEECCCCCCCCCce
Confidence 1112334564 32 4689999999 79999999999998764 3899655431 34 7
Q ss_pred eEEcHHHhhcEEEEEeCCCCEEEEEec
Q 015256 171 TLLGGIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 171 ~ILG~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
+|||+.|||++|+|||++++|||||++
T Consensus 302 ~iLG~~fl~~~yvvfD~~~~~igfa~~ 328 (329)
T 1htr_B 302 WILGDVFLRSYYSVYDLGNNRVGFATA 328 (329)
T ss_dssp EEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEChHHhccEEEEEECCCCEEEEEeC
Confidence 999999999999999999999999986
No 27
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=99.88 E-value=1e-22 Score=204.88 Aligned_cols=151 Identities=24% Similarity=0.441 Sum_probs=121.4
Q ss_pred CCCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhh
Q 015256 17 DHSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKET 96 (410)
Q Consensus 17 ~~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~ 96 (410)
-+.+.+.|++.|+|+ .+..||.|++++|.||++.+.. ..+..+||||||++++||.+++++|.++|.+..
T Consensus 214 ~D~~~y~g~l~~~pv-----~~~~~w~v~l~~i~v~g~~~~~-----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 283 (370)
T 3psg_A 214 IDSSYYTGSLNWVPV-----SVEGYWQITLDSITMDGETIAC-----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE 283 (370)
T ss_dssp CCGGGBSSCCEEEEC-----SEETTEEEEECEEESSSSEEEC-----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE
T ss_pred eChHhcCCcceeecc-----cccceeEEEEeEEEECCEEEec-----CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc
Confidence 346678899999999 5678999999999999987752 245789999999999999999999998885432
Q ss_pred hhcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC------CCC
Q 015256 97 HVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DST 170 (410)
Q Consensus 97 ~~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~------~~~ 170 (410)
. ....+.. +|+.. ..+|+|+|+| +|.+|+|++++|+++ . ...|+..+... ++.
T Consensus 284 ~-------~~g~~~v--------~C~~~-~~lP~i~f~~-~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~ 342 (370)
T 3psg_A 284 N-------SDGEMVI--------SCSSI-DSLPDIVFTI-DGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGEL 342 (370)
T ss_dssp C-------TTCCEEC--------CGGGG-GGCCCEEEEE-TTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCE
T ss_pred c-------CCCcEEE--------ECCCc-ccCCcEEEEE-CCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCc
Confidence 1 1112233 44443 4799999999 799999999999998 2 34699876542 236
Q ss_pred eEEcHHHhhcEEEEEeCCCCEEEEEecC
Q 015256 171 TLLGGIVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 171 ~ILG~~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
||||+.|||++|+|||++|+|||||++.
T Consensus 343 ~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 343 WILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999999999999863
No 28
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=99.88 E-value=9.4e-23 Score=201.32 Aligned_cols=154 Identities=16% Similarity=0.315 Sum_probs=120.6
Q ss_pred CCCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhh
Q 015256 17 DHSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKET 96 (410)
Q Consensus 17 ~~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~ 96 (410)
.+.+.+.|++.|+|+. .+..+|.|+|++|.||++.+.. .+..+||||||++++||+++|++|.++|....
T Consensus 173 ~d~~~~~g~l~~~p~~----~~~~~~~v~l~~i~v~~~~~~~------~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 173 IDTTAYTGSITYTAVS----TKQGFWEWTSTGYAVGSGTFKS------TSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CCTTSSSSCCEEEECB----CTTSSCEEEEEEEEETTSCCEE------EEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred cChHhcccceEEEEcc----CCCceEEEEEeeEEECCeeccC------CCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 3456788999999992 3578999999999999986631 24589999999999999999999988773221
Q ss_pred hhcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC--CCCeEEc
Q 015256 97 HVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLG 174 (410)
Q Consensus 97 ~~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~--~~~~ILG 174 (410)
. . .....+...|+ ..+|+|+|+| +|.+++|++++|++.....+...|++.+... .+.+|||
T Consensus 243 ~--~---~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iLG 305 (329)
T 1oew_A 243 S--S---SSVGGYVFPCS-----------ATLPSFTFGV-GSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFG 305 (329)
T ss_dssp E--E---TTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEESTTTSSEEEC
T ss_pred E--c---CCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeeeeecCCCCCeEEEEEEeCCCCCceEEC
Confidence 1 0 11112334454 3689999999 8999999999999876432347999976654 4789999
Q ss_pred HHHhhcEEEEEeC-CCCEEEEEec
Q 015256 175 GIVVRNTLVTYDR-GNDKVGFWKT 197 (410)
Q Consensus 175 ~~Fmr~~yVVFD~-en~rIGFA~s 197 (410)
+.|||++|+|||+ +|+|||||+.
T Consensus 306 ~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 306 DVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp HHHHTTEEEEEECSSSCEEEEEEC
T ss_pred hHHhcCEEEEEECCCCceEEEecC
Confidence 9999999999999 9999999973
No 29
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=99.88 E-value=1.4e-22 Score=199.19 Aligned_cols=148 Identities=26% Similarity=0.480 Sum_probs=120.3
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|+|++|.||++.+.. .+ ..+||||||++++||+++|++|.+++.+. .
T Consensus 171 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~~~~~~~-----~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~ 238 (324)
T 1am5_A 171 DNSHYTGSIHWIPV-----TAEKYWQVALDGITVNGQTAAC-----EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E 238 (324)
T ss_dssp CGGGBCSCCEEEEE-----EEETTEEEEECEEEETTEECCC-----CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E
T ss_pred CHHHcCCceEEEec-----CCCcEEEEEEeEEEECCceeec-----cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c
Confidence 34567899999999 4568999999999999988631 12 68999999999999999999999998654 1
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC------CCCe
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTT 171 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~------~~~~ 171 (410)
..+ .+...|+. . ..+|+|+|+| +|.+++|++++|+++. +..|+..+... .+.+
T Consensus 239 ----~~g---~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~----~~~C~~~~~~~~~~~~~~~~~ 297 (324)
T 1am5_A 239 ----NQG---EMMGNCAS--------V-QSLPDITFTI-NGVKQPLPPSAYIEGD----QAFCTSGLGSSGVPSNTSELW 297 (324)
T ss_dssp ----CCC---CEECCTTS--------S-SSSCCEEEEE-TTEEEEECHHHHEEES----SSCEEECEEECCSCCSSSCEE
T ss_pred ----cCC---cEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccC----CCeEEEEEEECccCCCCCCcE
Confidence 111 23445652 2 4789999999 7999999999999875 56899766542 3589
Q ss_pred EEcHHHhhcEEEEEeCCCCEEEEEecC
Q 015256 172 LLGGIVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 172 ILG~~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
|||+.|||++|+|||++++|||||+++
T Consensus 298 ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 298 IFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred EEChHHhccEEEEEECCCCEEEEEECC
Confidence 999999999999999999999999863
No 30
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=99.88 E-value=1.4e-22 Score=199.54 Aligned_cols=150 Identities=17% Similarity=0.333 Sum_probs=118.1
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+. .+..+|.|+|++|.||+ +. ..+..+|||||||+++||+++|++|.++|.....
T Consensus 171 d~~~~~g~l~~~p~~----~~~~~w~v~l~~i~v~~--~~------~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~ 238 (323)
T 1bxo_A 171 DSSKYTGSLTYTGVD----NSQGFWSFNVDSYTAGS--QS------GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ 238 (323)
T ss_dssp CGGGBSSCCEEEECB----CTTSSCEEEEEEEEETT--EE------EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE
T ss_pred ChhhccCceEEEECC----CCCCeEEEEEeeEEECC--cc------CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE
Confidence 455678999999993 35689999999999999 21 1346899999999999999999999888732211
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC--CCCeEEcH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS--DSTTLLGG 175 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~--~~~~ILG~ 175 (410)
. .....+...|+ ..+|+|+|+| +|.+++|++++|++.... +...|++.+... .+.+|||+
T Consensus 239 --~---~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~~~~~~ILG~ 300 (323)
T 1bxo_A 239 --D---SNAGGYVFDCS-----------TNLPDFSVSI-SGYTATVPGSLINYGPSG-DGSTCLGGIQSNSGIGFSIFGD 300 (323)
T ss_dssp --E---TTTTEEEECTT-----------CCCCCEEEEE-TTEEEEECHHHHEEEECS-SSSCEEESEEECTTCSSEEECH
T ss_pred --c---CcCCEEEEECC-----------CCCceEEEEE-CCEEEEECHHHeEEeccC-CCCeEEEEEECCCCCCcEEECh
Confidence 0 01112223454 3689999999 799999999999987643 347899976654 46899999
Q ss_pred HHhhcEEEEEeCCCCEEEEEec
Q 015256 176 IVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 176 ~Fmr~~yVVFD~en~rIGFA~s 197 (410)
.|||++|+|||++|+|||||++
T Consensus 301 ~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 301 IFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp HHHTTEEEEEETTTTEEEEEEB
T ss_pred HHHcCEEEEEECCCCEEEEecC
Confidence 9999999999999999999986
No 31
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=99.88 E-value=6e-22 Score=195.26 Aligned_cols=148 Identities=20% Similarity=0.361 Sum_probs=119.3
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+. .+..+|.|++++|.||+ .+. ..+..+||||||++++||+++|+++++++.+++.
T Consensus 175 d~~~~~g~l~~~p~~----~~~~~~~v~l~~i~vg~-~~~------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~ 243 (325)
T 2apr_A 175 DSTKFKGSLTTVPID----NSRGWWGITVDRATVGT-STV------ASSFDGILDTGTTLLILPNNIAASVARAYGASDN 243 (325)
T ss_dssp CGGGBCSCCEEEECB----CTTSSCEEEECEEEETT-EEE------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC
T ss_pred CchhccCceEEEEcc----CCCCEEEEEEeEEEECC-Eec------CCCceEEEecCCccEECCHHHHHHHHHHHhcccC
Confidence 355678999999992 34679999999999999 332 1356899999999999999999999999966543
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC-CCCeEEcHH
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS-DSTTLLGGI 176 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~-~~~~ILG~~ 176 (410)
+. ..+...|+ . ..+|+|+|+|+ |.+++|++++|++... +..|++.+... .+.+|||+.
T Consensus 244 ------~~-g~~~~~C~--------~--~~~p~i~f~f~-g~~~~ip~~~~~~~~~---~~~C~~~i~~~~~~~~iLG~~ 302 (325)
T 2apr_A 244 ------GD-GTYTISCD--------T--SAFKPLVFSIN-GASFQVSPDSLVFEEF---QGQCIAGFGYGNWGFAIIGDT 302 (325)
T ss_dssp ------SS-SCEEECSC--------G--GGCCCEEEEET-TEEEEECGGGGEEEEE---TTEEEESEEEESSSSEEECHH
T ss_pred ------CC-CeEEEECC--------C--CCCCcEEEEEC-CEEEEECHHHEEEcCC---CCeEEEEEEcCCCCCEEECHH
Confidence 11 12333454 2 24899999994 5699999999998754 57899977654 678999999
Q ss_pred HhhcEEEEEeCCCCEEEEEec
Q 015256 177 VVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 177 Fmr~~yVVFD~en~rIGFA~s 197 (410)
|||++|+|||++|+|||||++
T Consensus 303 fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 303 FLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp HHTTEEEEEETTTTEEEEEEB
T ss_pred HhcceEEEEECCCCEEEEEec
Confidence 999999999999999999986
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=99.86 E-value=1e-21 Score=194.38 Aligned_cols=160 Identities=18% Similarity=0.274 Sum_probs=120.5
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECC-EEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAG-KPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKET 96 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg-~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~ 96 (410)
+.+.+.|++.|+|+... .....||.|. ++|.||+ +.+.. +..+||||||++++||+++|++|.+++.++.
T Consensus 166 d~~~~~g~l~~~p~~~~-~~~~~~w~v~-~~i~v~~~~~l~~-------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~ 236 (340)
T 1wkr_A 166 DSSKYTGSITYTPITST-SPASAYWGIN-QSIRYGSSTSILS-------STAGIVDTGTTLTLIASDAFAKYKKATGAVA 236 (340)
T ss_dssp CGGGCSSCCEEEECCSS-TTGGGSSEEE-EEEEETTTEEEEE-------EEEEEECTTBCSEEECHHHHHHHHHHHTCEE
T ss_pred ChhhcccceEEEECccC-CCCcceEEEE-eeEEECCCeEccC-------CCeEEEeCCcccccCCHHHHHHHHHhhCCEE
Confidence 34567899999999311 0116799999 9999998 87742 2479999999999999999999988875443
Q ss_pred hhcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEccc-----CCceEEEEEEc-C---
Q 015256 97 HVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV-----SGAYCLGIFQN-S--- 167 (410)
Q Consensus 97 ~~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~-----~~~~Cl~i~~s-~--- 167 (410)
. .....+ ..+|... ..+|+|+|+| +|.+++|+|++|+++.... ....|+..+.. .
T Consensus 237 ~------~~~g~~--------~~~C~~~-~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~ 300 (340)
T 1wkr_A 237 D------NNTGLL--------RLTTAQY-ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDS 300 (340)
T ss_dssp C------TTTSSE--------EECHHHH-HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCT
T ss_pred c------CCCCeE--------Eeecccc-ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCC
Confidence 2 001112 2345433 4689999999 7899999999999865421 13567765543 1
Q ss_pred --CCCeEEcHHHhhcEEEEEeCCCCEEEEEecCCCcc
Q 015256 168 --DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 202 (410)
Q Consensus 168 --~~~~ILG~~Fmr~~yVVFD~en~rIGFA~s~C~~~ 202 (410)
+..+|||+.|||++|+|||++++|||||+++|++.
T Consensus 301 ~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 301 GEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp TSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred CCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCC
Confidence 24699999999999999999999999999999864
No 33
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=99.85 E-value=3.3e-21 Score=199.35 Aligned_cols=151 Identities=19% Similarity=0.261 Sum_probs=121.6
Q ss_pred CCCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhh
Q 015256 17 DHSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKET 96 (410)
Q Consensus 17 ~~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~ 96 (410)
-+.+.+.|++.|+|+ .+..+|.|+++ |.||+++. ....+||||||++++||++++++|.+++.+..
T Consensus 296 iD~s~y~G~l~~~pv-----~~~~~w~v~l~-I~Vgg~~~--------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~ 361 (451)
T 3qvc_A 296 IEERFFDGPLNYEKL-----NHDLMWQVDLD-VHFGNVSS--------KKANVILDSATSVITVPTEFFNQFVESASVFK 361 (451)
T ss_dssp CCGGGEEEEEEEEEC-----SSTTSSEEEEE-EEETTEEE--------EEEEEEECTTBSSEEECHHHHHHHHTTTTCEE
T ss_pred cchhhcCCceEEEEc-----ccCCeeEEEEE-EEECCccC--------CCceEEEeCCCccccCCHHHHHHHHHHcCCee
Confidence 346678899999999 56789999999 99999821 24689999999999999999999988885432
Q ss_pred hhcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC---CCCeEE
Q 015256 97 HVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS---DSTTLL 173 (410)
Q Consensus 97 ~~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~---~~~~IL 173 (410)
. .....+.. +|+ ...+|+|+|+| +|.+++|++++|++...+.++..|+..+... .+.+||
T Consensus 362 ~------~~~g~y~v--------~C~--~~~~P~itf~f-gg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~IL 424 (451)
T 3qvc_A 362 V------PFLSLYVT--------TCG--NTKLPTLEYRS-PNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVL 424 (451)
T ss_dssp C------TTSSCEEE--------ETT--CTTCCCEEEEE-TTEEEEECHHHHEEECTTTSTTEEEECEEECCCSTTEEEE
T ss_pred c------CCCCeEEe--------eCC--cCcCCcEEEEE-CCEEEEEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEE
Confidence 1 00112223 444 24789999999 7999999999999987643457899877665 368999
Q ss_pred cHHHhhcEEEEEeCCCCEEEEEecC
Q 015256 174 GGIVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 174 G~~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
|+.|||++|+|||++++|||||+++
T Consensus 425 G~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 425 GDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999999999999999999999863
No 34
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=99.84 E-value=4.1e-21 Score=198.79 Aligned_cols=150 Identities=22% Similarity=0.310 Sum_probs=119.0
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhh
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH 97 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~ 97 (410)
+.+.+.|++.|+|+ .+..+|.|+++ |.||| .+. .+..+|||||||+++||+++|++|.+++.+..
T Consensus 298 D~~~y~G~l~~~pv-----~~~~~w~V~l~-I~Vgg-~~~-------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~- 362 (453)
T 2bju_A 298 EERFYEGPLTYEKL-----NHDLYWQITLD-AHVGN-IML-------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIK- 362 (453)
T ss_dssp CGGGEEEEEEEEEE-----EEETTEEEEEE-EEETT-EEE-------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEE-
T ss_pred CHHHcCCceEEEec-----CCCceEEEEEE-EEECc-EEe-------ccccEEEcCCCCeEecCHHHHHHHHHHhCCcc-
Confidence 45567899999999 45689999999 99999 331 24689999999999999999999988775421
Q ss_pred hcccccCCCCCCccccCCCCccccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC---CCCeEEc
Q 015256 98 VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS---DSTTLLG 174 (410)
Q Consensus 98 ~~~~~~g~~~~~~~~Cy~~s~~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~---~~~~ILG 174 (410)
...+ ..+...|+. ..+|+|+|+| +|.+++|++++|+++....+...|+..+... .+.+|||
T Consensus 363 ---~~~g--~~~~v~C~~----------~~~P~itf~f-gg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG 426 (453)
T 2bju_A 363 ---VPFL--PFYVTLCNN----------SKLPTFEFTS-ENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILG 426 (453)
T ss_dssp ---CTTS--SCEEEETTC----------TTCCCEEEEC-SSCEEEECHHHHEEECTTTSTTEEEECEEECCCSSCEEEEC
T ss_pred ---cCCC--ceEEEecCC----------CCCCcEEEEE-CCEEEEECHHHhEeecccCCCceEEEEEEeCCCCCCCEEEC
Confidence 1111 023445652 3689999999 7999999999999986532356999766554 3589999
Q ss_pred HHHhhcEEEEEeCCCCEEEEEecC
Q 015256 175 GIVVRNTLVTYDRGNDKVGFWKTN 198 (410)
Q Consensus 175 ~~Fmr~~yVVFD~en~rIGFA~s~ 198 (410)
+.|||++|+|||++++|||||+++
T Consensus 427 d~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 427 DPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHhhcEEEEEECCCCEEEEEEcc
Confidence 999999999999999999999874
No 35
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.64 E-value=3.5e-16 Score=126.27 Aligned_cols=77 Identities=29% Similarity=0.528 Sum_probs=64.7
Q ss_pred cccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceEEEEEEcC-----CCCeEEcHHHhhcEEEEEeCCCCEEE
Q 015256 119 RDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS-----DSTTLLGGIVVRNTLVTYDRGNDKVG 193 (410)
Q Consensus 119 ~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~Cl~i~~s~-----~~~~ILG~~Fmr~~yVVFD~en~rIG 193 (410)
.+|+.+ ..+|+|+|+| +|++++|+|++|+++....+...|++.+... ++.||||+.|||++|+|||++|+|||
T Consensus 5 v~C~~~-~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riG 82 (87)
T 1b5f_B 5 VDCNTL-SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVG 82 (87)
T ss_dssp ECGGGG-GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EECCCC-CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEE
Confidence 456544 4799999999 7999999999999987543347899877642 45899999999999999999999999
Q ss_pred EEec
Q 015256 194 FWKT 197 (410)
Q Consensus 194 FA~s 197 (410)
||++
T Consensus 83 fA~~ 86 (87)
T 1b5f_B 83 FAEA 86 (87)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9985
No 36
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.68 E-value=1.2e-08 Score=96.28 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=57.9
Q ss_pred CCCCceeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHH
Q 015256 18 HSSTRYGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIK 94 (410)
Q Consensus 18 ~~s~~~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~ 94 (410)
+.+.+.|++.|+|+ .+..+|.|+|++|.||++.+.++. .+..+||||||++++||+++|++|.++|.+
T Consensus 171 d~~~~~g~l~~~p~-----~~~~~~~v~l~~i~v~~~~~~~~~----~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 171 DPNHFRGDHTYVPV-----TYQYYWQFGIGDVLIGDKSTGFCA----PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp CGGGEEEEEEEEEE-----EEETTEEEEECCEEETTEECCTTT----TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred ChhhccCceEEEEc-----ccCCeEEEEeeEEEECCEEecccC----CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 34567899999999 456899999999999999886532 356899999999999999999999998753
No 37
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.21 Score=42.84 Aligned_cols=27 Identities=15% Similarity=0.163 Sum_probs=24.9
Q ss_pred CCeEEcHHHhhcEEEEEeCCCCEEEEE
Q 015256 169 STTLLGGIVVRNTLVTYDRGNDKVGFW 195 (410)
Q Consensus 169 ~~~ILG~~Fmr~~yVVFD~en~rIGFA 195 (410)
-..|||..||+++.++.|.+++++-|.
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 358999999999999999999999995
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.79 E-value=0.17 Score=44.24 Aligned_cols=111 Identities=20% Similarity=0.329 Sum_probs=63.9
Q ss_pred CcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHHHHHHHHHHHHHhhhhcccccCCCCCCccccCCCC-c
Q 015256 40 PYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGA-G 118 (410)
Q Consensus 40 ~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~vy~aIi~aI~~~~~~~~~~~g~~~~~~~~Cy~~s-~ 118 (410)
..+.|+ +.|||+.+. ++||||.+.+.++.+.++.+- +..... .+..+ .. ... .
T Consensus 23 ~~l~v~---~~Ing~~v~-----------~LVDTGAs~s~Is~~~A~rlG--L~~~~~--~~~~~------~a--~g~G~ 76 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPLK-----------AFVDSGAQMTIMSQACAERCN--IMRLVD--RRWAG------VA--KGVGT 76 (148)
T ss_dssp CCCEEE---EEETTEEEE-----------EEECTTCSSCEEEHHHHHHTT--CGGGEE--GGGCE------EC--CC---
T ss_pred CEEEEE---EEECCEEEE-----------EEEeCCCCcEeeCHHHHHHcC--CccccC--cceeE------EE--EcCCc
Confidence 445555 448988764 799999999999999988861 111000 00000 00 000 0
Q ss_pred cccccccCCCCeEEEEECCCeEEEeCCCccEEEEcccCCceE-EEEEEcCCCCeEEcHHHhhcEEEEEeCCCCEEEEEec
Q 015256 119 RDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYC-LGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 197 (410)
Q Consensus 119 ~~c~~i~~~~PtItf~F~gG~t~tI~p~~Yl~~~~~~~~~~C-l~i~~s~~~~~ILG~~Fmr~~yVVFD~en~rIGFA~s 197 (410)
..+ ....+...+++ ++..+ .| +.++...+-..|||..||+.+..+.|.+++++-|...
T Consensus 77 ~~~---~g~v~~~~I~I-g~~~~-----------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 77 QRI---IGRVHLAQIQI-EGDFL-----------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp CEE---EEEEEEEEEEE-TTEEE-----------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred cEE---EEEEEEEEEEE-CCEEE-----------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 000 01233445555 34322 12 2222222346899999999999999999999988653
No 39
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.59 E-value=0.19 Score=35.39 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=20.5
Q ss_pred hhhhhhhhHHHH-HHHHHHHHHHHhhhhhhhhcc
Q 015256 357 RNLVAVVVGIVV-TLLLGLSILGLWSVWKRRQEA 389 (410)
Q Consensus 357 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 389 (410)
.+.-+++.|++. .+++.+.++++|+.||||.+.
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 344556666665 333445556778888887654
No 40
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.06 E-value=0.32 Score=34.24 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=17.8
Q ss_pred hhhhhHHHH-HHHHHHHHHHHhhhhhhhhccc
Q 015256 360 VAVVVGIVV-TLLLGLSILGLWSVWKRRQEAS 390 (410)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 390 (410)
-+++.|++. .+++.+.++++|+.||||++..
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 345555554 2333345566788888876543
No 41
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=85.94 E-value=0.43 Score=32.52 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=17.5
Q ss_pred hhhhhhhhhHHHHHHHHHH-HHHHHhhhhhhh
Q 015256 356 QRNLVAVVVGIVVTLLLGL-SILGLWSVWKRR 386 (410)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 386 (410)
+.+...++.|++..+++=+ ..++.|++||||
T Consensus 9 ~~~~~~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 9 GSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp CCSSTHHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred CCceEEEEeehhHHHHHHHHHHHHheeEeeec
Confidence 4555566666665555432 344466777765
No 42
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=75.94 E-value=1.8 Score=29.32 Aligned_cols=23 Identities=30% Similarity=0.268 Sum_probs=13.1
Q ss_pred hHHHHHHHHHH--HHHHHhhhhhhh
Q 015256 364 VGIVVTLLLGL--SILGLWSVWKRR 386 (410)
Q Consensus 364 ~~~~~~~~~~~--~~~~~~~~~~~~ 386 (410)
.|+++..++|+ .+..+||.||||
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeehHHHHHHHHHHHHHHHHeecC
Confidence 35555555443 344467788875
No 43
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=66.83 E-value=5 Score=28.13 Aligned_cols=7 Identities=57% Similarity=0.643 Sum_probs=2.8
Q ss_pred hhhhhhh
Q 015256 381 SVWKRRQ 387 (410)
Q Consensus 381 ~~~~~~~ 387 (410)
+.+|||+
T Consensus 33 ~~~RRR~ 39 (44)
T 2jwa_A 33 ILIKRRQ 39 (44)
T ss_dssp HHHHHHC
T ss_pred hheehhh
Confidence 3344443
No 44
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=63.81 E-value=7.3 Score=25.98 Aligned_cols=12 Identities=25% Similarity=0.761 Sum_probs=8.9
Q ss_pred HHhhhhhhhhcc
Q 015256 378 GLWSVWKRRQEA 389 (410)
Q Consensus 378 ~~~~~~~~~~~~ 389 (410)
|.++.||-|..-
T Consensus 25 ~tflywrgrrhh 36 (40)
T 2l9u_A 25 GTFLYWRGRRHH 36 (40)
T ss_dssp HHHHHHHHHHHC
T ss_pred ceeEEEcccccc
Confidence 478899988654
No 45
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=58.74 E-value=13 Score=32.78 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=41.1
Q ss_pred ceeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeecCC
Q 015256 245 AFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKGH 296 (410)
Q Consensus 245 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (410)
.++++- ++..+=...|.+.||..+.-+.+|.-|+++.+||.+-=-|..|-
T Consensus 88 G~~i~N--vD~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~L 137 (152)
T 1iv3_A 88 GAKLLQ--ASLVLTLDRPKLGPHRKALVDSLSRLMRLPQDRIGLTFKTSEGL 137 (152)
T ss_dssp TCCEEE--EEEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTTS
T ss_pred CCEEEE--EEEEEEecCCcCHHHHHHHHHHHHHHhCCCCceEEEEEecCCCC
Confidence 344554 56666778999999999999999999999999998877776653
No 46
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=58.20 E-value=13 Score=32.99 Aligned_cols=49 Identities=18% Similarity=0.335 Sum_probs=39.9
Q ss_pred ceeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeecC
Q 015256 245 AFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 295 (410)
Q Consensus 245 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (410)
.++++ |++..+-...|.+.||..+.-+.+|.-|+++.+||.+---|..|
T Consensus 91 G~~i~--NvD~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 139 (160)
T 2pmp_A 91 GYEIG--NLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEK 139 (160)
T ss_dssp TEEEE--EEEEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred CCEEE--EEEEEEEecCCcCHHHHHHHHHHHHHHHCCCcceEEEEEecCCC
Confidence 34454 45666777899999999999999999999999999986555544
No 47
>1gx1_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, lyase, isoprene biosynthesis; HET: CDP; 1.8A {Escherichia coli} SCOP: d.79.5.1 PDB: 1h47_A* 1h48_A* 3ern_A* 3eor_A* 3elc_A* 3esj_A* 3fba_A* 2amt_A* 1knj_A* 1knk_A 1u3l_A* 1u3p_A 1u40_A* 1u43_A* 1jy8_A* 2gzl_A* 1yqn_A* 3ghz_A* 3t80_A*
Probab=57.11 E-value=14 Score=32.70 Aligned_cols=48 Identities=19% Similarity=0.393 Sum_probs=39.0
Q ss_pred ceeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeec
Q 015256 245 AFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 294 (410)
Q Consensus 245 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (410)
.++++- ++..+=...|.+.||..+.-+.+|.-|+++.+||.+-=-|..
T Consensus 89 G~~i~N--vD~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E 136 (160)
T 1gx1_A 89 GYTLGN--VDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTE 136 (160)
T ss_dssp TCEEEE--EEEEEECSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECCT
T ss_pred CCEEEE--EEEEEEcCCCcchHHHHHHHHHHHHHhCCCCceEEEEEccCC
Confidence 344554 566666899999999999999999999999999998554443
No 48
>3re3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; structural genomics, center for structural genomics of infec diseases, csgid; 2.65A {Francisella tularensis subsp} SCOP: d.79.5.0
Probab=56.97 E-value=14 Score=32.83 Aligned_cols=48 Identities=13% Similarity=0.321 Sum_probs=39.8
Q ss_pred eeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeecC
Q 015256 246 FQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 295 (410)
Q Consensus 246 ~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (410)
++++ |++..+-...|.+.||..+.-+.+|.-|+++.+||.+-=-|..+
T Consensus 95 ~~i~--NvD~tii~q~PKl~p~~~~m~~~la~~L~~~~~~V~vKAtT~E~ 142 (162)
T 3re3_A 95 YSIS--NIDCTIIAQAPKMLPHIEKMRACLANILEIQISQINIKATTTER 142 (162)
T ss_dssp CEEE--EEEEEEECSSSCCGGGHHHHHHHHHHHHTSCGGGEEEEEECCSS
T ss_pred CEEE--EEEEEEEcCCCcchhHHHHHHHHHHHHHCCCCceEEEEEecCCC
Confidence 4444 46777778899999999999999999999999999886655543
No 49
>1t0a_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth; mixed alpha beta, homotrimer, synthase, lyase; HET: FPP; 1.60A {Shewanella oneidensis} SCOP: d.79.5.1 PDB: 1vh8_A* 1vha_A* 1jn1_A 3fpi_A* 3f6m_A*
Probab=56.83 E-value=14 Score=32.61 Aligned_cols=49 Identities=16% Similarity=0.453 Sum_probs=40.1
Q ss_pred ceeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeecC
Q 015256 245 AFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 295 (410)
Q Consensus 245 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (410)
.++++- ++..+=...|.+.||..+.-+.+|.-|+++.+||.+---|..|
T Consensus 90 G~~i~N--vD~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 138 (159)
T 1t0a_A 90 GFELGN--LDVTIIAQAPKMAPHIEDMRQVLAADLNADVADINVKATTTEK 138 (159)
T ss_dssp TEEEEE--EEEEEECSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECCTT
T ss_pred CCEEEE--EEEEEEcCCCcChHHHHHHHHHHHHHhCCCCceEEEEEecCCC
Confidence 455554 5666668999999999999999999999999999986655553
No 50
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; ssgcid, niaid, isoprene biosynthe lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3p0z_A* 3p10_A* 3q8h_A* 3qhd_A* 3ikf_A* 3ike_A*
Probab=51.59 E-value=19 Score=32.61 Aligned_cols=49 Identities=16% Similarity=0.253 Sum_probs=40.4
Q ss_pred ceeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeecC
Q 015256 245 AFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 295 (410)
Q Consensus 245 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (410)
.++++ |++..+-...|.+.|+..+.-+.+|.-|+++.+||.+-=-|..+
T Consensus 111 G~~I~--NvD~tIiaq~PKl~p~~~~mr~~la~~L~i~~~~VnVKATT~E~ 159 (183)
T 3f0d_A 111 GFAIR--NVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEK 159 (183)
T ss_dssp TEEEE--EEEEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred CCEEE--EEEEEEEcCCCcchhHHHHHHHHHHHHHCCCcceEEEEEecCCC
Confidence 34444 46777788899999999999999999999999999986666553
No 51
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=49.22 E-value=11 Score=29.42 Aligned_cols=24 Identities=29% Similarity=0.768 Sum_probs=12.6
Q ss_pred hhhhhhhHHHHH-HHHHHHHHHHhhhhh
Q 015256 358 NLVAVVVGIVVT-LLLGLSILGLWSVWK 384 (410)
Q Consensus 358 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 384 (410)
+.+++++|++.. +++||. ++++||
T Consensus 9 n~~~Iv~gvi~gilliGll---llliwk 33 (79)
T 2knc_B 9 DILVVLLSVMGAILLIGLA---ALLIWK 33 (79)
T ss_dssp CSHHHHHHHHHHHHHHHHH---HHHHHH
T ss_pred CchhhHHHHHHHHHHHHHH---HHHHHH
Confidence 456666665544 334443 456665
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=48.21 E-value=23 Score=33.68 Aligned_cols=42 Identities=19% Similarity=0.337 Sum_probs=31.6
Q ss_pred eeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 23 YGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 23 ~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
.|.+...|. .....|.++ |.||.+.+ .++||||++.+.+|..
T Consensus 3 ~g~v~~~~~-----~~~~~Y~~~---i~iG~Q~~-----------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 3 SGVATNTPT-----ANDEEYITP---VTIGGTTL-----------NLNFDTGSADLWVFST 44 (323)
T ss_dssp CEEEEEEEC-----GGGSCEEEE---EEETTEEE-----------EEEEETTCCCEEECBT
T ss_pred CCceeeeec-----CCCCEEEEE---EEECCEEE-----------EEEEeCCCcceEEecC
Confidence 477888888 456677654 67885544 5799999999999975
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=47.85 E-value=26 Score=33.26 Aligned_cols=42 Identities=19% Similarity=0.211 Sum_probs=31.4
Q ss_pred eeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 23 YGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 23 ~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
.|+++..|. .....|.++ |.||.+.+ .++||||++.+.+|..
T Consensus 2 ~~~v~~~~~-----~~~~~Y~~~---i~iG~Q~~-----------~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 2 KGSAVTTPQ-----NNDEEYLTP---VTVGKSTL-----------HLDFDTGSADLWVFSD 43 (325)
T ss_dssp CEEEEEEEC-----TTTSCEEEE---EEEBTEEE-----------EEEEETTCCCEEEECT
T ss_pred CceEEeEEc-----CCCCEEEEE---EEECCEEE-----------EEEEeCCCccceEeeC
Confidence 377777787 466777755 66775544 5799999999999875
No 54
>3b6n_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; malaria isoprenoid biosynthesis and prenylation pathways ISPF; 2.26A {Plasmodium vivax sai-1}
Probab=43.77 E-value=20 Score=32.43 Aligned_cols=49 Identities=16% Similarity=0.232 Sum_probs=40.2
Q ss_pred ceeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeecC
Q 015256 245 AFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 295 (410)
Q Consensus 245 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (410)
.+++|- ++..+=...|.+.|+..+.-+.||.-|+++.+||.+---|..+
T Consensus 116 Gy~I~N--vD~tiiaq~PKi~p~~~~m~~nia~~L~i~~~~VnVKAtT~E~ 164 (187)
T 3b6n_A 116 NYAIAN--VDIIVIAEVPKISPIREEIVRNISSALGISESQVSLKGKTHEQ 164 (187)
T ss_dssp TEEEEE--EEEEEECSSSCSHHHHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred CCEEEE--EEEEEEeCCCcchHHHHHHHHHHHHHhCCCcceEEEEEecCCC
Confidence 455554 5666678899999999999999999999999999986665554
No 55
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=43.21 E-value=15 Score=27.97 Aligned_cols=36 Identities=33% Similarity=0.412 Sum_probs=15.8
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHh-hh--hhhhhccc
Q 015256 354 WWQRNLVAVVVGIVVTLLLGLSILGLW-SV--WKRRQEAS 390 (410)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 390 (410)
||.+-.+.+++|-.+. ++.+..++|+ -| |+||+||+
T Consensus 4 ~~~~p~~LivlGg~~~-lll~~glcI~ccvkcrhRrrqAe 42 (70)
T 2klu_A 4 VPRGSMALIVLGGVAG-LLLFIGLGIFFSVRSRHRRRQAE 42 (70)
T ss_dssp SCCCSSHHHHHHHHHH-HHHHHHHHHHHHHHSSCCSSSCT
T ss_pred chhhHHHHHHHhHHHH-HHHHHHHHHHHhhHHHHHHHHHH
Confidence 3433333344443332 3333444555 34 55555554
No 56
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=42.04 E-value=33 Score=32.65 Aligned_cols=42 Identities=21% Similarity=0.348 Sum_probs=31.0
Q ss_pred eeeeeeEEccCcCCCCCCcEEEEEeEEEECCEEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 23 YGILPFRPFPQFLAGNSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 23 ~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
.|.+...|+ .....|.++ |.||.+.+ .++||||++.+.+|..
T Consensus 3 ~~~v~~~~~-----~~~~~Y~~~---i~iG~q~~-----------~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 3 TGSVTTNPT-----SNDEEYITQ---VTVGDDTL-----------GLDFDTGSADLWVFSS 44 (323)
T ss_dssp CEEEEEEEC-----GGGCCEEEE---EEETTEEE-----------EEEEETTCCCEEECBT
T ss_pred CCceeeeEc-----CCCCEEEEE---EEECCEEE-----------EEEEcCCCcceEEecC
Confidence 477777777 455667654 67785443 5799999999999975
No 57
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=41.87 E-value=13 Score=24.80 Aligned_cols=12 Identities=25% Similarity=0.227 Sum_probs=7.3
Q ss_pred HHHHHhhhhhhh
Q 015256 375 SILGLWSVWKRR 386 (410)
Q Consensus 375 ~~~~~~~~~~~~ 386 (410)
.++++.+.||||
T Consensus 23 i~l~~~~~iRRr 34 (35)
T 1iij_A 23 LVVVVGILIKRR 34 (35)
T ss_dssp HTTTTTHHHHHC
T ss_pred HHHHhheEEeec
Confidence 344566677766
No 58
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=39.69 E-value=21 Score=24.60 Aligned_cols=23 Identities=30% Similarity=0.774 Sum_probs=13.9
Q ss_pred hhhhhhhHHHH-HHHHHHHHHHHh
Q 015256 358 NLVAVVVGIVV-TLLLGLSILGLW 380 (410)
Q Consensus 358 ~~~~~~~~~~~-~~~~~~~~~~~~ 380 (410)
+.+++++|++. ++++|+..+.+|
T Consensus 8 n~~~Iv~gvi~~ivliGl~lLliw 31 (43)
T 2k9j_B 8 DILVVLLSVMGAILLIGLAALLIW 31 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEeehHHHHHHHHHHHHHHHHHHH
Confidence 56677777665 355676655444
No 59
>1s7q_A H-2KB, H-2 class I histocompatibility antigen, K-B alpha chain; LCMV, MHC class I, immune escape, immune system; 1.99A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1s7r_A 1s7s_A 1s7t_A 1bii_A 3qul_A 1s7v_A 1s7w_A 1s7x_A 3quk_A 1s7u_A 1nez_A*
Probab=36.66 E-value=8.4 Score=37.82 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=0.0
Q ss_pred hhhhh-hhhc--ccccccccc
Q 015256 380 WSVWK-RRQE--ASKTYQPVG 397 (410)
Q Consensus 380 ~~~~~-~~~~--~~~~~~~~~ 397 (410)
+++|| ||.. ..+.|.|..
T Consensus 305 ~~~~~~k~~~~~~~~~~~~~~ 325 (348)
T 1s7q_A 305 FVMKMRRRNTGGKGGDYALAP 325 (348)
T ss_dssp ---------------------
T ss_pred EEEEEEEecCCCCCCCcccCC
Confidence 56899 5433 225787754
No 60
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=33.99 E-value=58 Score=30.86 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=29.7
Q ss_pred eeeeeeE-EccCcCCCCCCcEEEEEeEEEEC--CEEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 23 YGILPFR-PFPQFLAGNSPYYNIELKELRVA--GKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 23 ~G~~~~v-Pv~~~~~~~~~yY~V~L~gI~Vg--g~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
.|+++.. |. .....|.+ .|.|| .+.+ .++||||++.+.+|..
T Consensus 2 ~~~v~~~~~~-----~~~~~Y~~---~i~iGTP~Q~~-----------~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 2 TGSAPNHPSD-----SADSEYIT---SVSIGTPAQVL-----------PLDFDTGSSDLWVFSS 46 (329)
T ss_dssp CEEEEEEESS-----TTCCCEEE---EEEETTTTEEE-----------EEEEETTCCCEEECBT
T ss_pred CcceeeecCC-----CCCCEEEE---EEEECCCCeEE-----------EEEEcCCCCCeEEecC
Confidence 3566666 54 45667765 46788 4443 5799999999999975
No 61
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=33.24 E-value=61 Score=30.72 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=29.3
Q ss_pred eeeeeE-EccCcCCCCCCcEEEEEeEEEEC--CEEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 24 GILPFR-PFPQFLAGNSPYYNIELKELRVA--GKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 24 G~~~~v-Pv~~~~~~~~~yY~V~L~gI~Vg--g~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
|+++-. |. .....|.+ .|.|| .+.+ .++||||++.+.+|..
T Consensus 3 ~~v~~~~~~-----~~~~~Y~~---~i~iGTP~Q~~-----------~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPID-----SLDDAYIT---PVQIGTPAQTL-----------NLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESS-----TTCCCEEE---EEEETTTTEEE-----------EEEEETTCCCEEECBT
T ss_pred ceeEeeecC-----CCCCEEEE---EEEECCCCeEE-----------EEEECCCCCCeEEecC
Confidence 566666 55 45667765 46788 4443 5799999999999874
No 62
>1scf_A Stem cell factor; steel factor, KIT ligand, MAST cell growth factor, hormone/growth factor complex; HET: 1PE; 2.20A {Homo sapiens} SCOP: a.26.1.2 PDB: 1exz_A 2e9w_C* 2o27_A 2o26_A
Probab=33.10 E-value=9.1 Score=36.20 Aligned_cols=26 Identities=31% Similarity=0.658 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhhhc
Q 015256 361 AVVVGIVVTLLLGLSILGLWSVWKRRQE 388 (410)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (410)
+|++-.+..|++| .++|+.+ ||+||.
T Consensus 217 ~~~l~al~slvig-f~~ga~~-wk~k~~ 242 (273)
T 1scf_A 217 AMALPALFSLIIG-FAFGALY-WKKRQP 242 (273)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHH-HHHHHHh-hcccCC
Confidence 4555666777777 6777776 999874
No 63
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=32.41 E-value=28 Score=27.11 Aligned_cols=28 Identities=29% Similarity=0.285 Sum_probs=21.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhhh
Q 015256 359 LVAVVVGIVVTLLLGLSILGLWSVWKRR 386 (410)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (410)
++.|++|+++.-++.|++.-++..++.|
T Consensus 14 v~gvi~gilliGllllliwk~~~~i~Dr 41 (79)
T 2knc_B 14 LLSVMGAILLIGLAALLIWKLLITIHDR 41 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888888888888888777666444
No 64
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=31.38 E-value=53 Score=32.41 Aligned_cols=45 Identities=18% Similarity=0.330 Sum_probs=38.3
Q ss_pred EEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeecC
Q 015256 251 ITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 295 (410)
Q Consensus 251 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (410)
.|++..+=...+.+.||..+.-+.+|+.|+++.+||.+---|..|
T Consensus 301 ~n~d~~~~~~~pk~~~~~~~~~~~~~~~~~~~~~~v~~ka~t~e~ 345 (371)
T 1w55_A 301 INIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEK 345 (371)
T ss_dssp EEEEEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred EEEeEEEEeCCCCchhHHHHHHHHHHHHhCCCcceEEEEEecCCC
Confidence 346777778999999999999999999999999999986555543
No 65
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=30.72 E-value=24 Score=29.20 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=26.8
Q ss_pred hHHHHHHHhhcccCcceeEEeeeeecCCceeEEEEee
Q 015256 269 TELSEFIAHELQVDDIEVHLLNFSSKGHDYLVRWGIF 305 (410)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
.+|.+|+|+.|+|..|||.|. .|-.+..|=...
T Consensus 53 ~ali~~LAk~l~V~ks~V~Iv----~G~tSR~K~v~I 85 (108)
T 1n91_A 53 SHLVKFLGKQFRVAKSQVVIE----KGELGRHKQIKI 85 (108)
T ss_dssp HHHHHHHHHHTCCCTTTEEES----SCTTSSEEEEEE
T ss_pred HHHHHHHHHHhCCccceEEEE----ecCCCCccEEEE
Confidence 689999999999999999996 366666665544
No 66
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=30.41 E-value=12 Score=35.93 Aligned_cols=8 Identities=0% Similarity=-0.039 Sum_probs=5.0
Q ss_pred EEECCEEe
Q 015256 49 LRVAGKPL 56 (410)
Q Consensus 49 I~Vgg~~l 56 (410)
-.|++..+
T Consensus 27 G~vDd~qf 34 (315)
T 1cd1_A 27 VWLGDLQT 34 (315)
T ss_dssp EEETTEEE
T ss_pred EEECCEEE
Confidence 45677665
No 67
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=29.65 E-value=27 Score=29.22 Aligned_cols=23 Identities=17% Similarity=0.829 Sum_probs=15.2
Q ss_pred cccchhhhhhhhhhhHHHHHHHH
Q 015256 350 IKQTWWQRNLVAVVVGIVVTLLL 372 (410)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~ 372 (410)
.++.||++.-+.+++++++.+++
T Consensus 88 ~rkmwwkn~K~~iii~~iv~iii 110 (119)
T 2kog_A 88 KRKYWWKNLKMMIILGVICAIIL 110 (119)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45669999877666665554443
No 68
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=29.34 E-value=42 Score=21.17 Aligned_cols=15 Identities=27% Similarity=0.654 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHhhh
Q 015256 368 VTLLLGLSILGLWSV 382 (410)
Q Consensus 368 ~~~~~~~~~~~~~~~ 382 (410)
+..++..+++|.|+.
T Consensus 12 lvalltflafgfwlf 26 (32)
T 2lx0_A 12 LVALLTFLAFGFWLF 26 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344566788988875
No 69
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=28.51 E-value=51 Score=25.96 Aligned_cols=32 Identities=19% Similarity=0.379 Sum_probs=22.9
Q ss_pred CCCcEEEEEeEEEECC--EEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 38 NSPYYNIELKELRVAG--KPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 38 ~~~yY~V~L~gI~Vgg--~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
....|.++ |.||. +.+ .++||||++.+.+|..
T Consensus 11 ~~~~Y~~~---i~iGTP~Q~~-----------~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 11 MDAQYYGE---IGIGTPPQCF-----------TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TTTEEEEE---EEETTTTEEE-----------EEEEETTCCCEEEEBT
T ss_pred CCCeEEEE---EEECCCCeEE-----------EEEEeCCCCceEEeEc
Confidence 34566654 67773 433 5899999999999864
No 70
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=26.20 E-value=75 Score=30.03 Aligned_cols=41 Identities=22% Similarity=0.522 Sum_probs=28.4
Q ss_pred eeeeeEEccCcCCCCCCcEEEEEeEEEEC--CEEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 24 GILPFRPFPQFLAGNSPYYNIELKELRVA--GKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 24 G~~~~vPv~~~~~~~~~yY~V~L~gI~Vg--g~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
|.++-.+. .....|.++ |.|| .+.+ .++||||++.+.+|..
T Consensus 4 ~~v~~~~~-----~~~~~Y~~~---i~iGTP~q~~-----------~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 4 GTVPMTDY-----GNDIEYYGQ---VTIGTPGKKF-----------NLDFDTGSSDLWIAST 46 (325)
T ss_dssp TEEEEEEE-----TTTTEEEEE---EEETTTTEEE-----------EEEEETTCCCCEEEBT
T ss_pred Cceeeeec-----CCCCEEEEE---EEECCCCeEE-----------EEEEcCCCCCEEEccC
Confidence 45555454 556677654 6788 4444 5799999999999864
No 71
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=24.38 E-value=71 Score=30.57 Aligned_cols=44 Identities=16% Similarity=0.298 Sum_probs=29.7
Q ss_pred eeeeeeEEccCcCCCCCCcEEEEEeEEEEC--CEEeecCCccccCCCcEEEecCCcceecCHH
Q 015256 23 YGILPFRPFPQFLAGNSPYYNIELKELRVA--GKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 83 (410)
Q Consensus 23 ~G~~~~vPv~~~~~~~~~yY~V~L~gI~Vg--g~~l~l~~~~f~~~~~aIIDSGTT~t~LP~~ 83 (410)
.|++.-+|+. +....+|.++ |.|| .+.+ .++||||++.+.+|..
T Consensus 4 ~g~~~~~~l~---~~~~~~Y~~~---i~iGtP~q~~-----------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLY---DFDLEEYAIP---VSIGTPGQDF-----------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEE---ETTTTEEEEE---EEETTTTEEE-----------EEEEETTCCCCEEEBT
T ss_pred CCccceEEee---cCCCCEEEEE---EEECCCCcEE-----------EEEEcCCCCCeEECCC
Confidence 3666667772 1345667654 6788 3443 5799999999999864
No 72
>2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens}
Probab=23.36 E-value=51 Score=27.81 Aligned_cols=34 Identities=6% Similarity=0.244 Sum_probs=29.2
Q ss_pred CcchhHHHHHHHhhcccCcceeEEeeeeecCCce
Q 015256 265 KPNFTELSEFIAHELQVDDIEVHLLNFSSKGHDY 298 (410)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (410)
+-.+.+|.+.||.+||++..|+|+--+..-.|..
T Consensus 65 ~~~~~~~~~~va~~lg~~~~~~RlW~~~~RqN~T 98 (130)
T 2kvr_A 65 NSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGT 98 (130)
T ss_dssp TSBHHHHHHHHHHHHCCCGGGCEEEECCCCBTTB
T ss_pred cCcHHHHHHHHHHHhCCCcccEEEEEeecCCCCC
Confidence 4568999999999999999999998887776664
No 73
>2uzh_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; ISPF, lyase, mycobacteria, complex with CDP; HET: CDP IPE; 2.2A {Mycobacterium smegmatis}
Probab=22.84 E-value=91 Score=27.63 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=30.0
Q ss_pred ceeeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccC
Q 015256 245 AFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVD 282 (410)
Q Consensus 245 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (410)
.++++- ++..+=...|.+.||..+.-+.||.-|+++
T Consensus 93 G~~i~N--vD~tii~q~PKi~p~~~~m~~~ia~~L~~~ 128 (165)
T 2uzh_A 93 GFVIGN--ATVQVIGNRPKVGPRREEAQQVLSELVGAP 128 (165)
T ss_dssp TEEEEE--EEEEEESSSSCCGGGHHHHHHHHHHHHTSC
T ss_pred CCEEEE--EEEEEEcCCCcchHHHHHHHHHHHHHhCCC
Confidence 455554 566677799999999999999999999995
No 74
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=21.69 E-value=1.1e+02 Score=24.99 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=34.7
Q ss_pred eeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeec
Q 015256 247 QIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 294 (410)
Q Consensus 247 ~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (410)
.+-++.|+... ..-.|.-+|+-+.+|..|+++.++|-+-+|-..
T Consensus 15 ~Rke~~~~v~H----~~~tpsk~eirekLAk~~~~~~d~Vvv~~~~T~ 58 (102)
T 1ywx_A 15 QRREIKFTVSF----DAATPSIKDVKMKLVAVLNANKQVLVVDTLDQI 58 (102)
T ss_dssp TEEEEEEEEEC----SSCCCCHHHHHHHHHHHHTSCSTTEEEEEEEEC
T ss_pred CcEEEEEEEEc----CCCCCCHHHHHHHHHHHHCCCCCEEEEEccEec
Confidence 34454444444 447788999999999999999999999998765
No 75
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=21.00 E-value=77 Score=26.94 Aligned_cols=24 Identities=29% Similarity=0.609 Sum_probs=19.8
Q ss_pred EEEECCEEeecCCccccCCCcEEEecCCcceecCH
Q 015256 48 ELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPG 82 (410)
Q Consensus 48 gI~Vgg~~l~l~~~~f~~~~~aIIDSGTT~t~LP~ 82 (410)
.+.|||+.+. +++|||.+.+.|.+
T Consensus 26 ~i~I~G~~~~-----------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 26 TLKVGGQPVT-----------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEETTEEEE-----------EEECTTCSSCEECS
T ss_pred EEEECCEEEE-----------EEEeCCCCeEEEcc
Confidence 3778888763 69999999999876
No 76
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=20.04 E-value=1.2e+02 Score=24.53 Aligned_cols=44 Identities=9% Similarity=0.120 Sum_probs=34.9
Q ss_pred eeeeEEEEEeecccCCCCCcchhHHHHHHHhhcccCcceeEEeeeeec
Q 015256 247 QIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 294 (410)
Q Consensus 247 ~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (410)
.+-++.|++.. ..-+|.-+|+-+-+|+.|++|.++|-+-+|-..
T Consensus 15 ~Rke~~~~v~H----~~~tpsk~eirekLAk~~~~~~~~Vvv~~~~t~ 58 (101)
T 1xn9_A 15 NRRELDFIVKY----EGSTPSRNDVRNKLAAMLNAPLELLVIQRIKTE 58 (101)
T ss_dssp TEEEEEEEEEC----SSSCCCHHHHHHHHHHHTTCCTTTEEEEEEEEC
T ss_pred CcEEEEEEEEc----CCCCCCHHHHHHHHHHHHCCCCCEEEEEeeEec
Confidence 34555555544 346788899999999999999999999999774
Done!