Query 015267
Match_columns 410
No_of_seqs 193 out of 529
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 09:36:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x5n_A SPRPN10, 26S proteasome 99.9 3.8E-24 1.3E-28 197.8 17.7 160 84-245 15-183 (192)
2 4b4t_W RPN10, 26S proteasome r 99.9 1.4E-23 4.7E-28 203.9 16.4 161 84-245 16-187 (268)
3 1z60_A TFIIH basal transcripti 99.8 1.9E-22 6.5E-27 153.2 0.3 59 329-397 1-59 (59)
4 3ibs_A Conserved hypothetical 99.7 5.1E-16 1.7E-20 142.1 18.6 155 84-246 24-209 (218)
5 1q0p_A Complement factor B; VO 99.5 7.3E-14 2.5E-18 127.7 12.9 158 90-248 29-217 (223)
6 1shu_X Anthrax toxin receptor 99.5 1.5E-13 5.3E-18 121.9 10.8 148 93-247 26-178 (182)
7 2b2x_A Integrin alpha-1; compu 99.5 9E-13 3.1E-17 122.0 14.8 153 94-247 38-208 (223)
8 1ijb_A VON willebrand factor; 99.4 5.3E-12 1.8E-16 115.4 19.1 157 90-247 27-192 (202)
9 1n3y_A Integrin alpha-X; alpha 99.4 2.1E-13 7.2E-18 122.8 7.6 151 93-246 26-189 (198)
10 1v7p_C Integrin alpha-2; snake 99.4 3.5E-12 1.2E-16 115.9 15.8 152 94-246 22-191 (200)
11 1rrk_A Complement factor B; BB 99.4 3.4E-12 1.2E-16 130.8 16.4 158 90-248 15-203 (497)
12 4hqo_A Sporozoite surface prot 99.4 1.1E-11 3.7E-16 118.6 17.1 152 96-248 39-204 (266)
13 1mf7_A Integrin alpha M; cell 99.4 7.4E-13 2.5E-17 119.5 8.5 154 90-246 19-185 (194)
14 1jey_B KU80; double-strand DNA 99.4 4.9E-12 1.7E-16 133.8 15.8 151 84-234 20-228 (565)
15 1atz_A VON willebrand factor; 99.4 2.4E-11 8.2E-16 109.3 17.8 152 89-243 18-177 (189)
16 1pt6_A Integrin alpha-1; cell 99.4 8.3E-12 2.8E-16 114.5 14.6 151 94-245 23-191 (213)
17 4hqf_A Thrombospondin-related 99.4 1.2E-11 3.9E-16 118.8 16.0 152 94-246 40-205 (281)
18 4fx5_A VON willebrand factor t 99.3 2.9E-11 9.9E-16 125.3 17.5 151 89-247 92-254 (464)
19 3n2n_F Anthrax toxin receptor 99.3 2E-11 6.8E-16 108.5 11.6 147 97-247 27-181 (185)
20 2x31_A Magnesium-chelatase 60 99.3 8.8E-14 3E-18 124.9 -5.1 155 90-247 19-187 (189)
21 3hrz_D Complement factor B; se 99.2 7.7E-11 2.6E-15 126.5 14.1 158 89-247 256-444 (741)
22 2odp_A Complement C2; C3/C5 co 99.2 9.6E-11 3.3E-15 120.7 13.1 156 91-247 24-210 (509)
23 2xgg_A Microneme protein 2; A/ 99.2 4.7E-10 1.6E-14 100.3 13.9 127 89-216 30-163 (178)
24 1mjn_A Integrin alpha-L; rossm 99.0 4.1E-10 1.4E-14 100.9 5.9 149 89-246 15-175 (179)
25 3zqk_A VON willebrand factor; 99.0 4.3E-09 1.5E-13 95.8 12.0 149 89-247 34-190 (199)
26 1jey_A KU70; double-strand DNA 99.0 6.1E-09 2.1E-13 111.3 14.9 131 84-215 48-208 (609)
27 3k6s_A Integrin alpha-X; cell 98.9 1E-09 3.6E-14 124.3 5.0 151 89-242 143-306 (1095)
28 3rag_A Uncharacterized protein 98.2 2.6E-06 8.8E-11 81.4 9.1 66 174-240 8-80 (242)
29 1yvr_A RO autoantigen, 60-kDa 98.1 6.8E-06 2.3E-10 86.2 9.6 132 84-230 381-538 (538)
30 2nut_A Protein transport prote 97.8 0.00051 1.7E-08 75.3 18.1 98 151-249 263-396 (769)
31 2nvo_A RO sixty-related protei 97.7 0.0003 1E-08 73.9 12.9 127 90-231 385-535 (535)
32 1pcx_A Protein transport prote 97.4 0.0031 1.1E-07 69.6 17.0 80 150-233 302-410 (810)
33 1m2o_A SEC23, protein transpor 97.3 0.0059 2E-07 66.9 17.3 98 151-249 257-390 (768)
34 1m2v_B SEC24, protein transpor 97.2 0.0045 1.6E-07 69.1 15.2 80 150-233 418-526 (926)
35 2ww8_A RRGA, cell WALL surface 97.1 0.0011 3.9E-08 73.7 9.2 99 84-184 237-387 (893)
36 3eh1_A Protein transport prote 96.9 0.018 6.1E-07 63.0 16.5 79 151-233 268-374 (751)
37 2iue_A Pactolus I-domain; memb 96.6 0.071 2.4E-06 49.7 15.9 147 94-244 20-206 (212)
38 3rag_A Uncharacterized protein 96.1 0.009 3.1E-07 57.0 6.8 75 92-168 149-226 (242)
39 3eh2_A Protein transport prote 96.0 0.064 2.2E-06 58.8 13.8 96 150-247 285-415 (766)
40 3efo_B SEC24 related gene fami 95.9 0.13 4.6E-06 56.3 15.6 95 151-247 290-419 (770)
41 3fcs_B Integrin beta-3; beta p 95.4 0.13 4.3E-06 55.8 13.3 141 93-236 127-335 (690)
42 3k6s_B Integrin beta-2; cell r 93.3 0.073 2.5E-06 57.7 5.4 141 93-237 120-326 (687)
43 2dlq_A GLI-kruppel family memb 91.7 0.11 3.9E-06 41.6 3.4 87 289-391 7-118 (124)
44 2i13_A AART; DNA binding, zinc 91.7 0.031 1E-06 49.1 -0.2 90 289-397 49-168 (190)
45 1z2q_A LM5-1; membrane protein 91.0 0.18 6.1E-06 40.0 3.7 52 342-397 15-74 (84)
46 2yw8_A RUN and FYVE domain-con 90.8 0.16 5.4E-06 40.1 3.2 40 342-385 13-52 (82)
47 1x4u_A Zinc finger, FYVE domai 90.7 0.2 6.7E-06 39.7 3.7 39 342-384 8-46 (84)
48 2dmd_A Zinc finger protein 64, 90.6 0.21 7.3E-06 38.3 3.8 73 302-392 7-88 (96)
49 1iym_A EL5; ring-H2 finger, ub 90.1 0.32 1.1E-05 34.3 4.1 47 348-398 5-51 (55)
50 2dlq_A GLI-kruppel family memb 89.9 0.15 5E-06 41.0 2.4 78 302-398 6-102 (124)
51 1joc_A EEA1, early endosomal a 89.3 0.19 6.5E-06 42.9 2.7 35 347-385 68-102 (125)
52 4ap4_A E3 ubiquitin ligase RNF 89.2 0.058 2E-06 44.7 -0.6 94 289-404 34-127 (133)
53 3t7l_A Zinc finger FYVE domain 89.0 0.22 7.4E-06 40.1 2.7 36 346-385 18-53 (90)
54 2ee8_A Protein ODD-skipped-rel 89.0 0.18 6.2E-06 39.6 2.3 43 350-392 47-97 (106)
55 2lt7_A Transcriptional regulat 89.0 0.23 8E-06 42.1 3.1 34 289-322 22-69 (133)
56 3lrq_A E3 ubiquitin-protein li 88.8 0.16 5.5E-06 41.0 1.8 52 349-407 23-75 (100)
57 2i13_A AART; DNA binding, zinc 88.8 0.13 4.5E-06 44.9 1.4 84 289-391 77-184 (190)
58 2djb_A Polycomb group ring fin 88.7 0.37 1.3E-05 36.2 3.8 55 347-408 14-68 (72)
59 2ect_A Ring finger protein 126 88.3 0.78 2.7E-05 34.7 5.4 57 347-408 14-70 (78)
60 2ecw_A Tripartite motif-contai 88.0 0.51 1.8E-05 35.8 4.2 53 347-407 18-76 (85)
61 2yur_A Retinoblastoma-binding 87.9 0.58 2E-05 35.4 4.4 56 347-409 14-72 (74)
62 6rxn_A Rubredoxin; electron tr 87.1 0.29 9.9E-06 34.9 2.0 24 289-312 4-39 (46)
63 3vi3_B Integrin beta-1; beta p 85.9 20 0.00068 36.9 15.7 148 92-244 137-352 (454)
64 1x4j_A Ring finger protein 38; 85.7 0.69 2.4E-05 34.8 3.7 50 347-401 22-71 (75)
65 1y02_A CARP2, FYVE-ring finger 85.5 0.14 4.8E-06 43.7 -0.4 46 348-397 19-64 (120)
66 3ztg_A E3 ubiquitin-protein li 85.4 0.89 3E-05 35.5 4.4 47 347-400 12-60 (92)
67 3pwf_A Rubrerythrin; non heme 85.4 0.35 1.2E-05 43.4 2.1 24 289-312 138-162 (170)
68 1vfy_A Phosphatidylinositol-3- 85.3 0.52 1.8E-05 36.3 2.8 32 349-384 12-43 (73)
69 2y43_A E3 ubiquitin-protein li 85.2 0.38 1.3E-05 38.3 2.2 50 349-405 23-72 (99)
70 2ecv_A Tripartite motif-contai 85.2 1.2 4.1E-05 33.7 5.0 54 347-408 18-77 (85)
71 2kmk_A Zinc finger protein GFI 85.0 0.11 3.7E-06 38.7 -1.2 69 304-391 2-80 (82)
72 1wfk_A Zinc finger, FYVE domai 84.3 0.76 2.6E-05 36.8 3.5 47 347-397 8-61 (88)
73 3t3p_B Integrin beta-3; integr 84.2 25 0.00084 36.4 15.6 141 93-236 127-335 (472)
74 3v4v_B Integrin beta-7; cell a 83.9 11 0.00038 39.2 12.9 141 92-236 147-354 (503)
75 2ecm_A Ring finger and CHY zin 83.6 1.2 4E-05 31.1 3.9 49 348-400 5-53 (55)
76 1wff_A Riken cDNA 2810002D23 p 83.6 1.2 4E-05 35.8 4.3 40 347-395 24-63 (85)
77 1lko_A Rubrerythrin all-iron(I 82.3 0.47 1.6E-05 43.1 1.7 24 289-312 155-180 (191)
78 2dmi_A Teashirt homolog 3; zin 82.3 0.96 3.3E-05 35.9 3.4 75 303-391 19-103 (115)
79 2ep4_A Ring finger protein 24; 82.2 1.3 4.6E-05 33.0 4.0 49 347-400 14-62 (74)
80 2egp_A Tripartite motif-contai 81.7 1.3 4.5E-05 33.3 3.8 53 347-407 11-70 (79)
81 2yt9_A Zinc finger-containing 81.6 0.76 2.6E-05 35.0 2.5 43 350-392 37-90 (95)
82 2v3b_B Rubredoxin 2, rubredoxi 81.3 0.71 2.4E-05 34.0 2.0 24 289-312 3-45 (55)
83 3zyq_A Hepatocyte growth facto 81.0 1.8 6.1E-05 40.3 5.2 33 349-385 165-197 (226)
84 2kiz_A E3 ubiquitin-protein li 80.6 1.5 5.3E-05 32.2 3.8 49 347-400 13-61 (69)
85 1wg2_A Zinc finger (AN1-like) 80.5 1.3 4.6E-05 33.7 3.4 41 345-395 12-52 (64)
86 2kn9_A Rubredoxin; metalloprot 80.4 0.76 2.6E-05 36.6 2.0 24 289-312 27-69 (81)
87 1dvp_A HRS, hepatocyte growth 80.0 0.91 3.1E-05 41.9 2.8 33 349-385 162-194 (220)
88 1chc_A Equine herpes virus-1 r 79.6 1.7 5.7E-05 31.8 3.7 47 348-401 5-51 (68)
89 2ct7_A Ring finger protein 31; 79.3 0.96 3.3E-05 35.8 2.4 40 349-390 26-68 (86)
90 2jp9_A Wilms tumor 1; DNA bind 79.3 0.53 1.8E-05 37.3 0.9 42 350-391 68-119 (119)
91 2ckl_A Polycomb group ring fin 79.0 0.88 3E-05 36.8 2.1 48 348-402 15-62 (108)
92 3ng2_A RNF4, snurf, ring finge 78.7 0.86 2.9E-05 33.6 1.8 58 347-405 9-66 (71)
93 1yk4_A Rubredoxin, RD; electro 78.6 0.96 3.3E-05 32.9 2.0 24 289-312 2-44 (52)
94 2csh_A Zinc finger protein 297 78.1 0.71 2.4E-05 36.4 1.3 41 350-390 39-87 (110)
95 1t1h_A Gspef-atpub14, armadill 77.9 1.6 5.3E-05 33.0 3.1 54 347-408 7-61 (78)
96 1bor_A Transcription factor PM 77.9 3.5 0.00012 29.3 4.9 43 347-400 5-47 (56)
97 1x4s_A Protein FON, zinc finge 77.4 0.68 2.3E-05 34.7 0.9 28 276-303 12-40 (59)
98 1jm7_A BRCA1, breast cancer ty 77.0 2.1 7.2E-05 34.4 3.8 50 349-406 22-74 (112)
99 2l0b_A E3 ubiquitin-protein li 76.6 1.6 5.4E-05 34.4 2.9 49 347-400 39-87 (91)
100 4rxn_A Rubredoxin; electron tr 76.4 1.2 4.3E-05 32.7 2.0 24 289-312 3-45 (54)
101 1jm7_B BARD1, BRCA1-associated 76.2 2.9 0.0001 34.3 4.6 50 348-406 22-71 (117)
102 2ecy_A TNF receptor-associated 76.0 2.9 9.9E-05 30.5 4.1 50 347-404 14-64 (66)
103 2d8t_A Dactylidin, ring finger 75.6 1 3.5E-05 33.6 1.5 48 347-402 14-61 (71)
104 1dx8_A Rubredoxin; electron tr 75.4 1.3 4.6E-05 34.1 2.1 24 289-312 7-49 (70)
105 4ayc_A E3 ubiquitin-protein li 75.4 0.9 3.1E-05 38.6 1.2 44 349-400 54-97 (138)
106 1e8j_A Rubredoxin; iron-sulfur 75.3 1.7 5.9E-05 31.6 2.5 24 289-312 3-45 (52)
107 2ysl_A Tripartite motif-contai 75.0 2.6 9E-05 31.1 3.6 49 347-403 19-70 (73)
108 1wfp_A Zinc finger (AN1-like) 74.9 2.5 8.7E-05 33.0 3.6 39 347-395 24-62 (74)
109 2yqq_A Zinc finger HIT domain- 74.7 0.86 2.9E-05 33.8 0.8 23 277-303 14-37 (56)
110 1s24_A Rubredoxin 2; electron 74.5 1.3 4.6E-05 35.6 2.0 23 289-311 35-76 (87)
111 1ubd_C Protein (YY1 zinc finge 74.5 1.4 4.8E-05 35.2 2.2 33 289-321 5-52 (124)
112 3vk6_A E3 ubiquitin-protein li 73.9 0.82 2.8E-05 37.8 0.6 45 350-401 3-48 (101)
113 1wfh_A Zinc finger (AN1-like) 73.9 2.7 9.1E-05 32.0 3.3 39 347-395 14-52 (64)
114 2xeu_A Ring finger protein 4; 73.6 1.2 4.2E-05 31.9 1.4 57 348-405 3-59 (64)
115 1yuz_A Nigerythrin; rubrythrin 73.6 1.5 5.1E-05 40.3 2.3 24 289-312 171-195 (202)
116 2ea6_A Ring finger protein 4; 73.5 2.1 7.2E-05 31.0 2.7 52 347-399 14-65 (69)
117 2csy_A Zinc finger protein 183 73.4 2.7 9.2E-05 32.0 3.4 47 347-401 14-60 (81)
118 3fl2_A E3 ubiquitin-protein li 73.0 1.9 6.6E-05 35.6 2.7 45 349-401 53-98 (124)
119 1e4u_A Transcriptional repress 72.6 4.1 0.00014 31.5 4.3 52 347-402 10-62 (78)
120 2gli_A Protein (five-finger GL 72.6 3.9 0.00014 33.8 4.6 75 289-391 34-123 (155)
121 2rpc_A Zinc finger protein ZIC 72.1 2.1 7.2E-05 35.7 2.8 24 368-391 120-145 (155)
122 2ysj_A Tripartite motif-contai 71.8 3.3 0.00011 29.8 3.4 42 347-396 19-63 (63)
123 2ecj_A Tripartite motif-contai 71.4 3.7 0.00013 28.7 3.6 42 347-396 14-58 (58)
124 1tf6_A Protein (transcription 70.1 3.7 0.00013 35.5 4.0 90 289-395 42-166 (190)
125 1a1h_A QGSR zinc finger peptid 70.0 0.79 2.7E-05 34.5 -0.4 70 304-391 5-85 (90)
126 2vrw_B P95VAV, VAV1, proto-onc 69.8 1.9 6.5E-05 42.8 2.3 43 347-396 356-398 (406)
127 3uk3_C Zinc finger protein 217 69.3 2.4 8.1E-05 29.0 2.1 33 289-321 4-50 (57)
128 3mpx_A FYVE, rhogef and PH dom 68.8 1 3.4E-05 45.0 0.0 53 342-398 369-428 (434)
129 1tf6_A Protein (transcription 68.7 5.1 0.00017 34.5 4.6 71 302-391 41-129 (190)
130 2ckl_B Ubiquitin ligase protei 68.2 1.7 5.7E-05 37.9 1.3 45 349-400 55-100 (165)
131 2lv2_A Insulinoma-associated p 68.1 2.8 9.4E-05 32.9 2.4 34 289-322 28-75 (85)
132 1v87_A Deltex protein 2; ring- 68.1 3.3 0.00011 33.5 3.0 51 348-398 25-90 (114)
133 3hct_A TNF receptor-associated 67.9 1.8 6.1E-05 35.6 1.4 49 347-403 17-66 (118)
134 3h0g_I DNA-directed RNA polyme 67.9 9.9 0.00034 31.5 6.0 31 348-378 72-110 (113)
135 1twf_I B12.6, DNA-directed RNA 67.9 3.9 0.00013 34.5 3.5 31 348-378 72-110 (122)
136 4gzn_C ZFP-57, zinc finger pro 67.7 2.9 0.0001 30.5 2.4 34 289-322 4-51 (60)
137 3l11_A E3 ubiquitin-protein li 67.3 2 7E-05 34.9 1.6 45 348-400 15-60 (115)
138 2lt7_A Transcriptional regulat 66.6 0.69 2.4E-05 39.1 -1.5 73 301-391 20-101 (133)
139 2wbs_A Krueppel-like factor 4; 66.4 2.4 8.1E-05 31.6 1.7 69 305-391 7-88 (89)
140 2lcq_A Putative toxin VAPC6; P 65.4 2.6 8.8E-05 36.9 2.0 26 289-314 132-159 (165)
141 2ct2_A Tripartite motif protei 65.4 6.2 0.00021 30.0 4.0 50 347-400 14-66 (88)
142 2pd2_A Hypothetical protein ST 64.1 9.8 0.00034 30.3 5.1 58 155-215 12-72 (108)
143 1twf_L ABC10-alpha, DNA-direct 64.0 3.9 0.00013 31.5 2.5 24 289-312 28-54 (70)
144 2el4_A Zinc finger protein 268 63.4 3.3 0.00011 27.0 1.8 25 368-392 12-36 (46)
145 2ee8_A Protein ODD-skipped-rel 63.0 9.8 0.00033 29.3 4.8 34 289-322 17-64 (106)
146 2jrp_A Putative cytoplasmic pr 62.9 2.6 9E-05 33.5 1.3 33 280-313 8-41 (81)
147 1wfl_A Zinc finger protein 216 62.8 5.1 0.00017 31.3 2.9 39 347-395 24-62 (74)
148 1g25_A CDK-activating kinase a 62.6 4.9 0.00017 29.1 2.7 55 348-406 3-59 (65)
149 2jmo_A Parkin; IBR, E3 ligase, 62.0 5.4 0.00018 31.0 3.0 43 348-394 25-74 (80)
150 2ecl_A Ring-box protein 2; RNF 61.8 6.8 0.00023 30.0 3.6 54 347-400 14-74 (81)
151 1rik_A E6APC1 peptide; E6-bind 61.3 2.7 9.1E-05 24.2 0.9 25 368-392 2-26 (29)
152 2ctu_A Zinc finger protein 483 61.2 2.1 7.1E-05 30.6 0.5 10 289-298 18-27 (73)
153 2m0d_A Zinc finger and BTB dom 61.1 2.8 9.7E-05 24.0 1.0 25 368-392 3-27 (30)
154 2lvu_A Zinc finger and BTB dom 65.2 1.8 6E-05 24.6 0.0 24 368-391 2-25 (26)
155 2m0e_A Zinc finger and BTB dom 61.0 1.7 5.8E-05 24.8 -0.1 24 368-391 2-25 (29)
156 1znf_A 31ST zinc finger from X 60.9 3.3 0.00011 23.4 1.3 24 369-392 2-25 (27)
157 1bbo_A Human enhancer-binding 60.9 4.3 0.00015 27.6 2.1 20 302-321 28-47 (57)
158 2jp9_A Wilms tumor 1; DNA bind 60.6 1.2 4.1E-05 35.2 -1.1 77 303-398 6-104 (119)
159 2ecg_A Baculoviral IAP repeat- 60.1 5.3 0.00018 30.0 2.6 42 349-402 26-68 (75)
160 2gqj_A Zinc finger protein KIA 60.0 1.9 6.5E-05 33.7 0.1 37 289-325 24-78 (98)
161 2qip_A Protein of unknown func 59.8 11 0.00037 32.8 5.0 43 177-224 110-154 (165)
162 1x6e_A Zinc finger protein 24; 59.8 5.4 0.00018 28.8 2.6 34 289-322 14-61 (72)
163 2cot_A Zinc finger protein 435 59.6 7.3 0.00025 28.4 3.3 34 289-322 18-65 (77)
164 1x4w_A Hypothetical protein FL 58.7 4.1 0.00014 31.2 1.7 40 347-395 14-55 (67)
165 1twf_L ABC10-alpha, DNA-direct 58.7 6.9 0.00023 30.1 3.0 28 366-398 26-53 (70)
166 2ctd_A Zinc finger protein 512 58.6 6.7 0.00023 30.8 3.1 34 289-322 34-81 (96)
167 2kvf_A Zinc finger and BTB dom 58.3 3.9 0.00013 23.4 1.3 25 368-392 3-27 (28)
168 2epw_A Zinc finger protein 268 58.0 3.8 0.00013 26.7 1.3 24 368-391 12-35 (46)
169 2ytn_A Zinc finger protein 347 57.7 4.6 0.00016 26.3 1.7 25 368-392 12-36 (46)
170 2csz_A Synaptotagmin-like prot 57.6 5.7 0.0002 31.2 2.4 46 345-393 22-67 (76)
171 2gmg_A Hypothetical protein PF 56.9 5.5 0.00019 33.1 2.3 29 289-317 67-98 (105)
172 2em0_A Zinc finger protein 224 56.9 4 0.00014 26.7 1.3 24 368-391 12-35 (46)
173 1jx7_A Hypothetical protein YC 56.7 17 0.00057 28.9 5.3 64 150-216 12-84 (117)
174 2lce_A B-cell lymphoma 6 prote 56.4 5 0.00017 29.1 1.9 34 289-322 17-64 (74)
175 2eop_A Zinc finger protein 268 56.4 5 0.00017 26.1 1.7 24 368-391 12-35 (46)
176 1pft_A TFIIB, PFTFIIBN; N-term 55.7 2.9 9.9E-05 29.5 0.4 25 289-313 5-34 (50)
177 2apo_B Ribosome biogenesis pro 55.5 6.2 0.00021 29.6 2.2 25 290-316 7-31 (60)
178 2ema_A Zinc finger protein 347 55.5 3.7 0.00013 26.8 0.9 24 368-391 12-35 (46)
179 3hcs_A TNF receptor-associated 55.3 4 0.00014 35.5 1.4 48 347-402 17-65 (170)
180 2d9h_A Zinc finger protein 692 55.3 6.7 0.00023 28.6 2.5 39 289-327 7-64 (78)
181 2ebt_A Krueppel-like factor 5; 55.2 2.9 0.0001 31.8 0.4 66 307-391 21-98 (100)
182 1z6u_A NP95-like ring finger p 55.1 6.8 0.00023 33.9 2.8 47 349-403 79-126 (150)
183 2ytg_A ZFP-95, zinc finger pro 55.0 5.2 0.00018 26.1 1.6 24 368-391 12-35 (46)
184 1l1s_A Hypothetical protein MT 54.8 17 0.00057 29.3 5.0 57 155-214 17-76 (113)
185 2c2l_A CHIP, carboxy terminus 54.7 7.4 0.00025 35.8 3.2 53 348-408 208-261 (281)
186 1x5w_A Zinc finger protein 64, 54.6 7.2 0.00025 27.9 2.5 34 289-322 9-56 (70)
187 2eq0_A Zinc finger protein 347 54.5 5.7 0.00019 25.9 1.7 25 368-392 12-36 (46)
188 2lvr_A Zinc finger and BTB dom 59.0 2.7 9.3E-05 24.3 0.0 25 368-392 3-27 (30)
189 2elz_A Zinc finger protein 224 53.8 4.5 0.00016 26.4 1.1 24 368-391 12-35 (46)
190 2em5_A ZFP-95, zinc finger pro 53.6 6.2 0.00021 25.7 1.8 24 368-391 12-35 (46)
191 2el6_A Zinc finger protein 268 53.6 5.2 0.00018 26.1 1.4 24 368-391 12-35 (46)
192 2epz_A Zinc finger protein 28 53.6 5.8 0.0002 25.8 1.7 24 368-391 12-35 (46)
193 2lvt_A Zinc finger and BTB dom 58.5 2.8 9.6E-05 24.2 0.0 25 368-392 2-26 (29)
194 2ene_A Zinc finger protein 347 53.1 6.5 0.00022 25.6 1.9 25 368-392 12-36 (46)
195 1paa_A Yeast transcription fac 52.8 5.7 0.0002 22.8 1.4 24 369-392 3-27 (30)
196 2ytq_A Zinc finger protein 268 52.6 6.5 0.00022 25.6 1.8 24 368-391 12-35 (46)
197 1vd4_A Transcription initiatio 52.5 4.9 0.00017 28.6 1.2 28 289-316 14-52 (62)
198 2ep0_A Zinc finger protein 28 52.5 6.6 0.00023 25.5 1.8 24 368-391 12-35 (46)
199 2kvg_A Zinc finger and BTB dom 52.4 4.2 0.00014 23.3 0.7 24 368-391 3-26 (27)
200 2em9_A Zinc finger protein 224 52.2 5.9 0.0002 25.7 1.5 24 368-391 12-35 (46)
201 1zbd_B Rabphilin-3A; G protein 51.5 7.7 0.00026 33.4 2.5 38 347-387 54-91 (134)
202 2kfq_A FP1; protein, de novo p 51.5 3.3 0.00011 25.0 0.1 24 369-392 3-26 (32)
203 2dlk_A Novel protein; ZF-C2H2 51.5 4.2 0.00014 29.6 0.7 55 306-378 12-78 (79)
204 2kvh_A Zinc finger and BTB dom 51.4 4.2 0.00014 23.1 0.6 24 368-391 3-26 (27)
205 2en1_A Zinc finger protein 224 51.3 4.8 0.00016 26.2 0.9 24 368-391 12-35 (46)
206 2en8_A Zinc finger protein 224 51.2 6.9 0.00023 25.4 1.7 24 368-391 12-35 (46)
207 3mjh_B Early endosome antigen 51.1 5.4 0.00019 26.6 1.1 8 289-296 5-12 (34)
208 2eoe_A Zinc finger protein 347 51.0 4.1 0.00014 26.5 0.5 24 368-391 12-35 (46)
209 2m0f_A Zinc finger and BTB dom 50.5 2.7 9.2E-05 24.0 -0.4 24 368-391 2-25 (29)
210 2ysp_A Zinc finger protein 224 50.4 5.6 0.00019 25.9 1.2 24 368-391 12-35 (46)
211 2adr_A ADR1; transcription reg 50.3 6.2 0.00021 27.1 1.5 42 350-391 4-54 (60)
212 1x5w_A Zinc finger protein 64, 50.1 5.9 0.0002 28.3 1.3 21 368-388 37-57 (70)
213 3ky9_A Proto-oncogene VAV; cal 50.0 7.3 0.00025 40.8 2.5 57 322-398 516-572 (587)
214 2gmg_A Hypothetical protein PF 49.9 7.9 0.00027 32.2 2.2 26 350-378 69-94 (105)
215 2fc7_A ZZZ3 protein; structure 49.8 7.8 0.00027 30.5 2.1 31 348-384 21-56 (82)
216 2em7_A Zinc finger protein 224 49.7 6.8 0.00023 25.4 1.5 24 368-391 12-35 (46)
217 2emf_A Zinc finger protein 484 49.5 8 0.00027 25.2 1.9 24 368-391 12-35 (46)
218 2elv_A Zinc finger protein 406 49.3 6.4 0.00022 24.0 1.2 25 368-392 9-33 (36)
219 2rpc_A Zinc finger protein ZIC 49.3 13 0.00043 30.7 3.5 86 301-398 23-130 (155)
220 2zet_C Melanophilin; complex, 49.2 6.9 0.00024 34.4 1.9 37 347-386 67-103 (153)
221 2eml_A Zinc finger protein 28 49.1 6.3 0.00021 25.6 1.3 24 368-391 12-35 (46)
222 2ely_A Zinc finger protein 224 49.1 5.1 0.00017 26.2 0.8 24 368-391 12-35 (46)
223 2yt9_A Zinc finger-containing 48.9 11 0.00039 28.1 2.9 34 289-322 35-84 (95)
224 1p7a_A BF3, BKLF, kruppel-like 48.7 5 0.00017 24.6 0.7 24 368-391 11-34 (37)
225 2eme_A Zinc finger protein 473 48.5 6.8 0.00023 25.4 1.4 24 368-391 12-35 (46)
226 1ard_A Yeast transcription fac 48.5 8.3 0.00028 21.8 1.6 20 303-322 2-21 (29)
227 2ecn_A Ring finger protein 141 48.5 4.3 0.00015 29.7 0.4 43 347-398 14-56 (70)
228 1wjp_A Zinc finger protein 295 48.5 3.3 0.00011 32.4 -0.3 25 368-392 69-94 (107)
229 2ytr_A Zinc finger protein 347 48.5 6.8 0.00023 25.4 1.3 24 368-391 12-35 (46)
230 2wbt_A B-129; zinc finger; 2.7 48.3 11 0.00039 30.1 3.0 34 289-322 74-119 (129)
231 4ap4_A E3 ubiquitin ligase RNF 48.1 4.6 0.00016 32.9 0.5 56 347-403 6-61 (133)
232 2epr_A POZ-, at HOOK-, and zin 48.0 6.6 0.00023 26.0 1.2 29 368-396 12-46 (48)
233 2ytd_A Zinc finger protein 473 47.8 4.3 0.00015 26.5 0.3 24 368-391 12-35 (46)
234 1srk_A Zinc finger protein ZFP 47.6 5.7 0.0002 24.0 0.8 25 368-392 7-31 (35)
235 2ea5_A Cell growth regulator w 47.0 19 0.00064 26.7 3.8 43 347-401 14-57 (68)
236 1rmd_A RAG1; V(D)J recombinati 47.0 8.4 0.00029 31.2 2.0 47 348-402 23-70 (116)
237 1klr_A Zinc finger Y-chromosom 46.7 11 0.00036 21.4 1.9 20 303-322 2-21 (30)
238 2dmd_A Zinc finger protein 64, 46.7 11 0.00039 28.2 2.6 34 289-322 36-83 (96)
239 2emk_A Zinc finger protein 28 46.0 4.8 0.00016 26.3 0.3 24 368-391 12-35 (46)
240 2ep2_A Zinc finger protein 484 46.0 8.6 0.0003 24.9 1.6 24 368-391 12-35 (46)
241 2els_A Zinc finger protein 406 45.9 3.8 0.00013 25.1 -0.3 24 368-391 9-32 (36)
242 1llm_C Chimera of ZIF23-GCN4; 45.9 11 0.00038 28.2 2.4 37 289-325 3-55 (88)
243 3cw1_L U1 small nuclear ribonu 45.9 4.2 0.00014 32.0 -0.1 16 376-391 3-19 (77)
244 2eoq_A Zinc finger protein 224 45.8 6.4 0.00022 25.6 0.9 24 368-391 12-35 (46)
245 2ytk_A Zinc finger protein 347 45.7 5.1 0.00017 26.1 0.3 24 368-391 12-35 (46)
246 3j21_g 50S ribosomal protein L 45.0 13 0.00045 26.9 2.5 24 289-312 14-37 (51)
247 2enc_A Zinc finger protein 224 44.8 7.2 0.00025 25.3 1.0 24 368-391 12-35 (46)
248 2e72_A POGO transposable eleme 44.8 8.3 0.00028 27.7 1.3 15 365-379 9-23 (49)
249 4gzn_C ZFP-57, zinc finger pro 44.6 3.7 0.00013 29.9 -0.5 44 349-392 5-56 (60)
250 1x6h_A Transcriptional repress 44.3 14 0.00048 27.0 2.7 20 303-322 15-34 (86)
251 2emy_A Zinc finger protein 268 44.3 5.3 0.00018 26.0 0.3 24 368-391 12-35 (46)
252 2epx_A Zinc finger protein 28 43.9 11 0.00037 24.4 1.8 24 368-391 12-36 (47)
253 2ytj_A Zinc finger protein 484 43.9 7.5 0.00026 25.2 1.0 24 368-391 12-35 (46)
254 2jne_A Hypothetical protein YF 42.9 6.4 0.00022 32.4 0.6 34 279-313 37-71 (101)
255 2y1n_A E3 ubiquitin-protein li 42.8 7.7 0.00026 39.2 1.3 47 348-402 332-379 (389)
256 1x6e_A Zinc finger protein 24; 42.8 7 0.00024 28.2 0.8 42 349-390 15-64 (72)
257 2eod_A TNF receptor-associated 42.7 11 0.00037 26.8 1.8 34 289-322 10-56 (66)
258 1ubd_C Protein (YY1 zinc finge 42.6 10 0.00036 29.9 1.9 77 303-398 5-102 (124)
259 1y7p_A Hypothetical protein AF 42.3 39 0.0013 31.6 5.8 55 151-215 128-182 (223)
260 2e5r_A Dystrobrevin alpha; ZZ 42.1 9.9 0.00034 28.4 1.5 30 349-384 12-43 (63)
261 1z60_A TFIIH basal transcripti 41.8 6.7 0.00023 29.2 0.5 21 280-300 21-41 (59)
262 2kdx_A HYPA, hydrogenase/ureas 41.8 13 0.00046 30.7 2.4 24 289-312 73-99 (119)
263 2eq4_A Zinc finger protein 224 41.6 7.8 0.00027 25.1 0.8 24 368-391 12-35 (46)
264 1njq_A Superman protein; zinc- 41.6 8.8 0.0003 24.0 1.0 25 368-392 6-30 (39)
265 2aus_D NOP10, ribosome biogene 40.9 12 0.00041 28.0 1.7 25 290-316 6-30 (60)
266 1rim_A E6APC2 peptide; E6-bind 40.8 13 0.00044 22.4 1.7 20 303-322 2-21 (33)
267 2elq_A Zinc finger protein 406 40.8 7.1 0.00024 23.8 0.5 25 368-392 9-33 (36)
268 2vje_B MDM4 protein; proto-onc 40.6 8.4 0.00029 28.2 0.9 48 348-401 7-55 (63)
269 2cot_A Zinc finger protein 435 40.2 12 0.0004 27.2 1.7 45 348-392 18-70 (77)
270 2yqq_A Zinc finger HIT domain- 40.1 14 0.00048 27.2 2.0 34 348-390 12-45 (56)
271 3dpl_R Ring-box protein 1; ubi 39.9 14 0.00047 30.2 2.2 52 348-399 37-98 (106)
272 2eos_A B-cell lymphoma 6 prote 39.9 11 0.00038 23.8 1.3 25 368-392 11-35 (42)
273 2ej4_A Zinc finger protein ZIC 39.6 13 0.00044 27.9 1.9 57 305-391 27-85 (95)
274 1x4v_A Hypothetical protein LO 39.6 21 0.00071 26.9 2.9 39 347-395 11-51 (63)
275 1nj3_A NPL4; NZF domain, rubre 39.6 22 0.00074 22.5 2.7 25 289-313 6-30 (31)
276 2elx_A Zinc finger protein 406 38.6 8.1 0.00028 23.1 0.5 25 368-392 7-31 (35)
277 2elt_A Zinc finger protein 406 38.4 6.1 0.00021 24.0 -0.2 24 368-391 9-32 (36)
278 2enf_A Zinc finger protein 347 38.2 11 0.00039 24.3 1.2 25 368-392 12-36 (46)
279 1jzt_A Hypothetical 27.5 kDa p 38.0 57 0.0019 30.4 6.4 91 139-231 10-117 (246)
280 2enh_A Zinc finger protein 28 38.0 13 0.00043 24.1 1.4 25 368-392 12-36 (46)
281 2ab3_A ZNF29; zinc finger prot 38.0 7.6 0.00026 22.0 0.2 24 368-391 2-27 (29)
282 2ytb_A Zinc finger protein 32; 37.3 12 0.0004 23.6 1.1 25 368-392 11-35 (42)
283 2ytm_A Zinc finger protein 28 37.2 5 0.00017 26.3 -0.8 23 368-390 12-34 (46)
284 2kre_A Ubiquitin conjugation f 37.2 23 0.00079 28.4 3.1 54 347-408 28-81 (100)
285 2epq_A POZ-, at HOOK-, and zin 36.9 12 0.00043 24.0 1.2 29 368-396 10-44 (45)
286 2yts_A Zinc finger protein 484 36.9 13 0.00044 24.0 1.3 25 368-392 12-36 (46)
287 2emx_A Zinc finger protein 268 36.6 8.7 0.0003 24.6 0.4 24 368-391 10-33 (44)
288 1f2i_G Fusion of N-terminal 17 36.5 19 0.00066 25.6 2.3 34 289-322 19-68 (73)
289 2kr4_A Ubiquitin conjugation f 36.4 21 0.00071 27.6 2.6 52 347-406 13-64 (85)
290 2yu4_A E3 SUMO-protein ligase 36.2 12 0.0004 29.6 1.1 44 348-398 7-58 (94)
291 2ept_A Zinc finger protein 32; 36.2 14 0.00048 23.2 1.4 25 368-392 10-34 (41)
292 2ytt_A Zinc finger protein 473 36.2 8.1 0.00028 25.1 0.2 24 368-391 12-35 (46)
293 2lv2_A Insulinoma-associated p 36.2 14 0.00047 28.7 1.5 43 349-391 29-80 (85)
294 1m3v_A FLIN4, fusion of the LI 36.1 13 0.00044 30.6 1.4 31 375-405 54-84 (122)
295 4a0k_B E3 ubiquitin-protein li 36.0 2.8 9.5E-05 35.3 -2.7 51 348-398 48-108 (117)
296 2emh_A Zinc finger protein 484 35.7 17 0.00057 23.4 1.7 23 368-390 12-34 (46)
297 1tot_A CREB-binding protein; z 35.6 12 0.00041 26.9 1.0 30 348-384 6-36 (52)
298 2emp_A Zinc finger protein 347 35.5 18 0.00063 23.2 1.9 23 368-390 12-34 (46)
299 2eoo_A ZFP-95, zinc finger pro 35.5 18 0.00063 23.3 1.9 23 368-390 12-34 (46)
300 2eoy_A Zinc finger protein 473 35.4 16 0.00054 23.6 1.6 25 368-392 12-36 (46)
301 1qxf_A GR2, 30S ribosomal prot 35.4 13 0.00045 28.3 1.3 27 291-317 9-40 (66)
302 3iuf_A Zinc finger protein UBI 35.4 12 0.00042 24.9 1.0 25 368-392 7-32 (48)
303 2emg_A Zinc finger protein 484 35.2 13 0.00044 24.0 1.1 25 368-392 12-36 (46)
304 3mc3_A DSRE/DSRF-like family p 35.1 46 0.0016 27.7 4.8 58 152-214 28-98 (134)
305 2yu8_A Zinc finger protein 347 35.1 21 0.0007 23.0 2.1 24 368-391 12-35 (46)
306 2o8n_A APOA-I binding protein; 34.6 59 0.002 30.8 6.0 90 139-230 34-136 (265)
307 2em8_A Zinc finger protein 224 34.5 20 0.00067 23.1 1.9 23 368-390 12-34 (46)
308 2emi_A Zinc finger protein 484 34.5 12 0.00041 24.2 0.8 25 368-392 12-36 (46)
309 2yso_A ZFP-95, zinc finger pro 34.4 19 0.00065 23.1 1.8 24 368-391 12-35 (46)
310 3f2b_A DNA-directed DNA polyme 34.4 18 0.00062 40.9 2.7 26 289-314 502-538 (1041)
311 2ytf_A Zinc finger protein 268 34.3 14 0.00046 23.8 1.1 25 368-392 12-36 (46)
312 2em2_A Zinc finger protein 28 34.3 9.5 0.00033 24.8 0.3 24 368-391 12-35 (46)
313 2lcq_A Putative toxin VAPC6; P 34.2 14 0.00047 32.1 1.4 24 349-376 133-156 (165)
314 1x4s_A Protein FON, zinc finge 34.1 18 0.00063 26.9 1.8 32 348-387 11-45 (59)
315 2em6_A Zinc finger protein 224 34.1 14 0.00049 23.8 1.2 25 368-392 12-36 (46)
316 1q0q_A 1-deoxy-D-xylulose 5-ph 34.0 1.5E+02 0.005 30.1 8.9 61 177-242 10-73 (406)
317 2elr_A Zinc finger protein 406 33.8 18 0.00062 21.6 1.6 20 302-321 8-27 (36)
318 2epv_A Zinc finger protein 268 33.7 12 0.00043 24.0 0.8 25 368-392 12-36 (44)
319 2ct1_A Transcriptional repress 33.7 20 0.00067 26.0 2.0 22 369-390 46-67 (77)
320 2elp_A Zinc finger protein 406 33.5 16 0.00056 22.2 1.3 19 303-321 9-28 (37)
321 2epu_A Zinc finger protein 32; 33.4 12 0.00041 24.2 0.6 25 368-392 12-36 (45)
322 2eon_A ZFP-95, zinc finger pro 33.3 16 0.00055 23.7 1.3 25 368-392 12-36 (46)
323 2yu5_A Zinc finger protein 473 33.3 13 0.00044 23.8 0.8 25 368-392 12-36 (44)
324 2eof_A Zinc finger protein 268 33.2 11 0.00037 24.0 0.4 25 368-392 12-36 (44)
325 2emm_A ZFP-95, zinc finger pro 33.0 20 0.0007 22.9 1.8 24 368-391 12-35 (46)
326 3zxn_A RSBS, anti-sigma-factor 32.7 69 0.0024 26.2 5.5 60 158-217 26-88 (123)
327 1sp2_A SP1F2; zinc finger, tra 32.7 16 0.00054 21.2 1.1 24 369-392 3-28 (31)
328 2yte_A Zinc finger protein 473 32.6 19 0.00066 22.5 1.6 21 302-322 9-29 (42)
329 2amj_A Modulator of drug activ 32.5 27 0.00094 31.1 3.1 43 172-214 9-57 (204)
330 3fni_A Putative diflavin flavo 32.4 52 0.0018 28.1 4.8 40 174-214 3-43 (159)
331 2yti_A Zinc finger protein 347 32.3 14 0.00048 23.8 0.9 25 368-392 12-36 (46)
332 2kdx_A HYPA, hydrogenase/ureas 32.3 27 0.00092 28.8 2.8 27 367-399 72-99 (119)
333 2emb_A Zinc finger protein 473 32.2 15 0.0005 23.5 0.9 25 368-392 12-36 (44)
334 2eps_A POZ-, at HOOK-, and zin 32.1 18 0.00063 24.5 1.5 31 368-398 12-49 (54)
335 2yrj_A Zinc finger protein 473 32.0 17 0.00058 23.3 1.2 25 368-392 12-36 (46)
336 2vje_A E3 ubiquitin-protein li 31.9 17 0.00058 26.5 1.3 48 348-401 8-56 (64)
337 3k1l_B Fancl; UBC, ring, RWD, 31.9 48 0.0016 33.2 4.9 52 346-399 306-370 (381)
338 2yth_A Zinc finger protein 224 31.9 15 0.00051 23.8 1.0 25 368-392 12-36 (46)
339 1wim_A KIAA0161 protein; ring 31.8 14 0.00048 28.8 0.9 47 348-399 5-61 (94)
340 2elm_A Zinc finger protein 406 31.8 12 0.00041 23.1 0.4 25 368-392 9-34 (37)
341 1zfd_A SWI5; DNA binding motif 31.6 15 0.00053 21.4 0.9 25 368-392 3-29 (32)
342 1wd2_A Ariadne-1 protein homol 31.4 33 0.0011 25.2 2.9 35 348-384 6-42 (60)
343 2ytp_A Zinc finger protein 484 31.4 17 0.0006 23.4 1.2 25 368-392 12-36 (46)
344 2gli_A Protein (five-finger GL 31.4 37 0.0013 27.7 3.6 71 302-390 66-152 (155)
345 2eoj_A Zinc finger protein 268 31.4 13 0.00043 23.7 0.5 25 368-392 12-36 (44)
346 2eq1_A Zinc finger protein 347 31.3 16 0.00054 23.5 1.0 25 368-392 12-36 (46)
347 3mkr_B Coatomer subunit alpha; 31.3 20 0.00069 35.2 2.1 30 289-318 278-309 (320)
348 1wfe_A Riken cDNA 2310008M20 p 31.2 29 0.001 27.6 2.7 39 347-395 24-64 (86)
349 4ic3_A E3 ubiquitin-protein li 31.2 22 0.00076 26.5 2.0 41 349-401 25-66 (74)
350 2eq2_A Zinc finger protein 347 31.0 14 0.00049 23.8 0.7 25 368-392 12-36 (46)
351 2epc_A Zinc finger protein 32; 30.8 13 0.00045 23.3 0.5 25 368-392 11-35 (42)
352 3d3k_A Enhancer of mRNA-decapp 30.6 65 0.0022 30.2 5.5 37 176-214 86-122 (259)
353 2en6_A Zinc finger protein 268 30.5 18 0.00063 23.2 1.2 24 368-391 12-35 (46)
354 3mvn_A UDP-N-acetylmuramate:L- 30.3 98 0.0034 26.3 6.3 73 176-250 64-139 (163)
355 2drp_A Protein (tramtrack DNA- 30.3 13 0.00044 26.0 0.4 20 368-387 40-59 (66)
356 2ep3_A Zinc finger protein 484 29.9 19 0.00067 23.1 1.3 25 368-392 12-36 (46)
357 2el5_A Zinc finger protein 268 29.8 16 0.00056 22.9 0.8 25 368-392 10-34 (42)
358 2d1p_A TUSD, hypothetical UPF0 29.7 1.1E+02 0.0036 26.0 6.3 62 149-215 22-95 (140)
359 3knv_A TNF receptor-associated 29.7 9.9 0.00034 32.5 -0.4 44 347-398 30-74 (141)
360 2en7_A Zinc finger protein 268 29.6 22 0.00076 22.4 1.5 21 302-322 11-31 (44)
361 2jun_A Midline-1; B-BOX, TRIM, 29.6 19 0.00066 28.3 1.4 36 348-388 3-38 (101)
362 1wys_A Riken cDNA 2310008M20 p 29.4 29 0.00099 27.0 2.3 38 348-395 14-53 (75)
363 2ent_A Krueppel-like factor 15 29.3 25 0.00085 22.6 1.7 24 368-391 12-37 (48)
364 2elo_A Zinc finger protein 406 29.2 19 0.00063 21.8 1.0 20 303-322 9-28 (37)
365 3au8_A 1-deoxy-D-xylulose 5-ph 29.1 1.5E+02 0.0052 30.6 8.2 59 179-242 80-144 (488)
366 1wik_A Thioredoxin-like protei 28.9 2E+02 0.0067 22.4 7.5 49 177-227 16-67 (109)
367 2eq3_A Zinc finger protein 347 28.7 15 0.00051 23.6 0.5 25 368-392 12-36 (46)
368 2ep1_A Zinc finger protein 484 28.7 15 0.00052 23.6 0.6 25 368-392 12-36 (46)
369 3mv2_A Coatomer subunit alpha; 28.6 24 0.00081 34.8 2.1 42 276-317 270-317 (325)
370 2dip_A Zinc finger SWIM domain 28.1 23 0.00078 28.8 1.6 29 348-382 31-61 (98)
371 3h0g_L DNA-directed RNA polyme 28.0 29 0.001 26.1 2.0 26 289-314 21-49 (63)
372 4ayb_P DNA-directed RNA polyme 27.9 28 0.00095 24.9 1.8 26 289-314 3-34 (48)
373 2hy5_A Putative sulfurtransfer 27.9 1E+02 0.0035 25.3 5.7 64 149-217 10-85 (130)
374 2j7j_A Transcription factor II 27.8 14 0.00046 26.8 0.2 66 305-390 3-83 (85)
375 2en2_A B-cell lymphoma 6 prote 27.7 11 0.00038 23.8 -0.3 24 368-391 11-34 (42)
376 1fv5_A First zinc finger of U- 27.5 20 0.00069 23.3 1.0 22 301-322 6-27 (36)
377 1wgm_A Ubiquitin conjugation f 27.5 43 0.0015 26.6 3.1 51 348-406 22-73 (98)
378 3fro_A GLGA glycogen synthase; 27.1 1.7E+02 0.0058 27.4 8.0 69 177-245 252-330 (439)
379 3na7_A HP0958; flagellar bioge 27.0 12 0.0004 35.2 -0.4 31 348-378 198-232 (256)
380 2csh_A Zinc finger protein 297 27.0 28 0.00096 26.8 2.0 31 368-398 37-73 (110)
381 3nw0_A Non-structural maintena 26.8 31 0.0011 32.2 2.5 43 349-398 181-225 (238)
382 3iz6_X 40S ribosomal protein S 26.6 25 0.00085 28.1 1.5 27 290-316 37-68 (86)
383 3j20_W 30S ribosomal protein S 26.3 18 0.00063 27.3 0.7 27 291-317 17-48 (63)
384 2iu4_A DHA-DHAQ, dihydroxyacet 26.1 68 0.0023 31.7 4.9 42 176-218 95-136 (336)
385 3b08_B Ranbp-type and C3HC4-ty 26.0 30 0.001 26.2 1.8 28 289-316 8-35 (64)
386 2eov_A Zinc finger protein 484 25.8 30 0.001 22.0 1.7 21 302-322 11-31 (46)
387 2en3_A ZFP-95, zinc finger pro 25.7 25 0.00086 22.5 1.2 20 303-322 12-31 (46)
388 3tem_A Ribosyldihydronicotinam 25.2 82 0.0028 28.6 5.1 39 176-214 2-42 (228)
389 4gnr_A ABC transporter substra 25.1 1.1E+02 0.0038 28.3 6.1 70 129-211 12-81 (353)
390 2eou_A Zinc finger protein 473 25.1 31 0.0011 21.9 1.6 21 302-322 11-31 (44)
391 3ju3_A Probable 2-oxoacid ferr 24.8 48 0.0016 27.2 3.0 64 177-244 15-84 (118)
392 2eoh_A Zinc finger protein 28 24.8 32 0.0011 22.0 1.7 21 302-322 11-31 (46)
393 3t6o_A Sulfate transporter/ant 24.5 1.4E+02 0.005 23.6 6.0 51 174-227 47-101 (121)
394 2k4x_A 30S ribosomal protein S 24.4 14 0.00048 26.9 -0.3 27 289-315 18-48 (55)
395 3lfj_A Manxb, phosphotransfera 24.4 1.3E+02 0.0045 27.1 6.1 65 140-214 63-127 (187)
396 2i5o_A DNA polymerase ETA; zin 24.3 28 0.00095 23.7 1.2 11 289-299 9-19 (39)
397 2zjr_Z 50S ribosomal protein L 24.3 30 0.001 25.6 1.5 21 289-311 30-51 (60)
398 1vq8_Z 50S ribosomal protein L 24.2 21 0.00071 28.3 0.6 26 289-314 27-56 (83)
399 1dl6_A Transcription factor II 24.2 29 0.00098 25.4 1.4 25 290-314 12-41 (58)
400 2ct0_A Non-SMC element 1 homol 24.1 1E+02 0.0036 23.4 4.6 44 348-399 15-61 (74)
401 3u50_C Telomerase-associated p 24.0 23 0.00079 31.7 1.0 29 350-383 44-72 (172)
402 3zyw_A Glutaredoxin-3; metal b 24.0 1.8E+02 0.0061 23.1 6.4 51 177-228 17-69 (111)
403 3f6r_A Flavodoxin; FMN binding 23.9 61 0.0021 26.6 3.6 37 177-214 3-40 (148)
404 2yto_A Zinc finger protein 484 23.9 27 0.00092 22.4 1.1 20 303-322 12-31 (46)
405 3jyw_9 60S ribosomal protein L 23.5 38 0.0013 26.1 2.0 26 289-314 26-55 (72)
406 3qhp_A Type 1 capsular polysac 23.4 1.3E+02 0.0044 24.3 5.6 65 178-244 4-73 (166)
407 2em3_A Zinc finger protein 28 23.4 27 0.00093 22.3 1.0 20 303-322 12-31 (46)
408 2emj_A Zinc finger protein 28 23.3 28 0.00094 22.4 1.1 20 303-322 12-31 (46)
409 3o70_A PHD finger protein 13; 23.1 40 0.0014 25.3 2.1 61 324-397 2-65 (68)
410 2eow_A Zinc finger protein 347 23.0 28 0.00096 22.2 1.0 20 303-322 12-31 (46)
411 3n05_A NH(3)-dependent NAD(+) 23.0 6.1E+02 0.021 26.1 11.8 89 91-214 303-391 (590)
412 3u5c_b RP61, YS20, 40S ribosom 22.9 29 0.00099 27.5 1.2 27 290-316 35-66 (82)
413 2y1e_A 1-deoxy-D-xylulose 5-ph 22.9 2.4E+02 0.0082 28.4 8.2 58 179-241 24-85 (398)
414 2ctd_A Zinc finger protein 512 22.6 38 0.0013 26.3 1.9 43 349-391 35-86 (96)
415 2kln_A Probable sulphate-trans 22.5 1.2E+02 0.0041 24.4 5.2 42 175-216 48-92 (130)
416 3k1y_A Oxidoreductase; structu 22.5 1.1E+02 0.0036 27.2 5.1 40 176-215 12-59 (191)
417 3qmx_A Glutaredoxin A, glutare 22.5 1.4E+02 0.0047 23.2 5.3 55 171-228 10-64 (99)
418 2en9_A Zinc finger protein 28 22.4 38 0.0013 21.7 1.6 21 302-322 11-31 (46)
419 2fb6_A Conserved hypothetical 22.4 47 0.0016 27.3 2.6 56 159-217 26-84 (117)
420 2emz_A ZFP-95, zinc finger pro 22.2 39 0.0013 21.6 1.7 21 302-322 11-31 (46)
421 1f4p_A Flavodoxin; electron tr 22.2 69 0.0024 26.1 3.6 36 177-213 2-38 (147)
422 2pv0_B DNA (cytosine-5)-methyl 22.1 22 0.00076 35.8 0.5 46 347-400 92-149 (386)
423 3t6p_A Baculoviral IAP repeat- 22.0 45 0.0015 32.8 2.7 42 348-401 295-337 (345)
424 1n57_A Chaperone HSP31, protei 22.0 89 0.003 29.5 4.8 44 172-215 45-100 (291)
425 3ic4_A Glutaredoxin (GRX-1); s 22.0 2.4E+02 0.0081 20.6 7.1 63 179-244 14-91 (92)
426 2jny_A Uncharacterized BCR; st 21.9 27 0.00092 26.5 0.9 23 290-312 11-37 (67)
427 1yui_A GAGA-factor; complex (D 21.8 17 0.00058 24.6 -0.3 24 368-391 24-47 (54)
428 2ko5_A Ring finger protein Z; 21.8 19 0.00063 29.5 -0.1 34 274-313 38-71 (99)
429 2a5l_A Trp repressor binding p 21.7 60 0.002 27.9 3.2 39 176-215 6-45 (200)
430 3ny7_A YCHM protein, sulfate t 21.7 2.1E+02 0.0072 22.7 6.5 65 150-217 23-90 (118)
431 3a9j_C Mitogen-activated prote 21.7 59 0.002 20.8 2.4 24 289-312 8-31 (34)
432 3v43_A Histone acetyltransfera 21.6 46 0.0016 27.1 2.3 15 289-311 55-69 (112)
433 3cc2_Z 50S ribosomal protein L 21.6 28 0.00095 29.4 0.9 26 289-314 60-89 (116)
434 1ydg_A Trp repressor binding p 21.5 67 0.0023 28.0 3.6 39 176-215 7-46 (211)
435 2epp_A POZ-, at HOOK-, and zin 21.5 26 0.00089 26.0 0.7 26 367-392 12-37 (66)
436 2xzm_6 RPS27E; ribosome, trans 21.4 25 0.00087 27.8 0.6 27 291-317 34-65 (81)
437 2eox_A Zinc finger protein 473 21.4 27 0.00092 22.1 0.7 20 303-322 12-31 (44)
438 3u7r_A NADPH-dependent FMN red 21.4 58 0.002 29.0 3.1 39 175-213 2-41 (190)
439 2eom_A ZFP-95, zinc finger pro 21.4 41 0.0014 21.5 1.7 21 302-322 11-31 (46)
440 2xoc_A E3 ubiquitin-protein li 21.3 38 0.0013 32.3 1.9 48 348-398 79-131 (261)
441 3ipz_A Monothiol glutaredoxin- 21.1 2.2E+02 0.0076 22.3 6.4 51 177-228 19-71 (109)
442 2yho_A E3 ubiquitin-protein li 20.8 27 0.00091 26.7 0.6 41 349-401 19-60 (79)
443 3htk_C E3 SUMO-protein ligase 20.7 25 0.00084 33.7 0.5 48 347-401 180-231 (267)
444 2q9u_A A-type flavoprotein; fl 20.4 2E+02 0.0067 27.7 7.0 39 175-214 256-295 (414)
445 2eoz_A Zinc finger protein 473 20.4 27 0.00093 22.4 0.5 20 303-322 12-31 (46)
446 2yrm_A B-cell lymphoma 6 prote 20.2 43 0.0015 21.2 1.5 20 303-322 10-29 (43)
447 2em4_A Zinc finger protein 28 20.1 35 0.0012 21.9 1.0 20 303-322 12-31 (46)
448 2d9g_A YY1-associated factor 2 20.0 73 0.0025 22.9 2.8 27 289-315 11-37 (53)
449 2crc_A Ubiquitin conjugating e 20.0 37 0.0013 24.5 1.2 26 289-314 10-35 (52)
450 2js4_A UPF0434 protein BB2007; 20.0 31 0.0011 26.3 0.8 24 289-312 8-35 (70)
No 1
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=3.8e-24 Score=197.82 Aligned_cols=160 Identities=14% Similarity=0.239 Sum_probs=137.6
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHH
Q 015267 84 AAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLV 163 (410)
Q Consensus 84 M~~~D~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~~~~G~~SLqnaL~~A 163 (410)
|.++|+.||||+++++++..|+.+|+++||.+++|||+|+++.|++++|+|+|+..+...|.++ .+.|.++|++||++|
T Consensus 15 M~~~D~~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a~~~~plT~d~~~i~~~L~~l-~~~g~t~l~~aL~~A 93 (192)
T 2x5n_A 15 MINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDL-PVRGNAKFGDGIQIA 93 (192)
T ss_dssp GGCTTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCCEEEEEESCHHHHHHHHTTC-CCCSCCCHHHHHHHH
T ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCcEEecCCCCCHHHHHHHHHcC-CCCCCchHHHHHHHH
Confidence 9999999999999999999999999999999999999998667999999999999999999984 678889999999999
Q ss_pred HHHHhCCCCCCCc-eEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchhH---HHHHHHHHhhC----CeeEEeCC
Q 015267 164 QGLLSQIPSYGHR-EVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM---FICKHLCQDTG----GSYSVALD 235 (410)
Q Consensus 164 ~~~L~~~p~~~sr-eILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE~---~iLk~la~~Tg----G~Y~va~d 235 (410)
...|++.+.+..+ +||||++++.+.|++++.++++.+++.||+|+|||+|.+. . |+++++.++ +.|.....
T Consensus 94 ~~~l~~~~~~~~~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n~~~~s~~~~~~~ 172 (192)
T 2x5n_A 94 QLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAANSSDSCHLVSIPP 172 (192)
T ss_dssp HHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHCSTTCCEEEEECC
T ss_pred HHHHHhccccCCCceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhccCCCceEEEEecC
Confidence 9999998766554 5777777666788999999999999999999999999876 6 999999975 35553333
Q ss_pred H-HHHHHHHHh
Q 015267 236 E-SHFKELIME 245 (410)
Q Consensus 236 ~-~hl~~lL~~ 245 (410)
. ..|.+.|++
T Consensus 173 ~~~~l~d~~~~ 183 (192)
T 2x5n_A 173 SPQLLSDLVNQ 183 (192)
T ss_dssp CSSCHHHHHHT
T ss_pred cchhHHHHHhc
Confidence 2 346665543
No 2
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.4e-23 Score=203.88 Aligned_cols=161 Identities=13% Similarity=0.179 Sum_probs=141.4
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHH
Q 015267 84 AAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLV 163 (410)
Q Consensus 84 M~~~D~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~~~~G~~SLqnaL~~A 163 (410)
|++.|++||||++++++++.|++.++++||.++||||+|++..++++.|+|+|...++.+|+.+ .+.|.|+|++||++|
T Consensus 16 M~~~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~~vl~plT~D~~~il~aL~~l-~~~G~T~l~~gL~~A 94 (268)
T 4b4t_W 16 SRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDT-QIEGKLHMATALQIA 94 (268)
T ss_dssp TSSTTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCEEEEEEESCHHHHHHHHTTC-CCCSCCCHHHHHHHH
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcceeccCCcchHHHHHHHhhhc-CcCCCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999888899999999999999999885 789999999999999
Q ss_pred HHHHhCCCCCCCc-eEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh---HHHHHHHHHhhCC-----eeEEeC
Q 015267 164 QGLLSQIPSYGHR-EVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE---MFICKHLCQDTGG-----SYSVAL 234 (410)
Q Consensus 164 ~~~L~~~p~~~sr-eILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE---~~iLk~la~~TgG-----~Y~va~ 234 (410)
+..|+|.+.+..+ +||||.+|+.+.|++++.++++.++|+||+|+|||||.+ ...|+++++..|| .|++..
T Consensus 95 ~~aLk~~~~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng~~~~~s~~v~v 174 (268)
T 4b4t_W 95 QLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTV 174 (268)
T ss_dssp HHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCSSTTTSCEEEEE
T ss_pred HHHHHhcccCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcCCCCCceeEEEe
Confidence 9999998777665 566677788889999999999999999999999999964 4789999998876 455443
Q ss_pred CH--HHHHHHHHh
Q 015267 235 DE--SHFKELIME 245 (410)
Q Consensus 235 d~--~hl~~lL~~ 245 (410)
-+ .-|.+.|++
T Consensus 175 ~~g~~~lsd~l~~ 187 (268)
T 4b4t_W 175 TPGPRLLYENIAS 187 (268)
T ss_dssp CCCSSCHHHHHHT
T ss_pred CCCCccHHHHHhc
Confidence 33 335565554
No 3
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=99.84 E-value=1.9e-22 Score=153.18 Aligned_cols=59 Identities=36% Similarity=0.975 Sum_probs=49.7
Q ss_pred CCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCC
Q 015267 329 IAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCE 397 (410)
Q Consensus 329 l~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~ 397 (410)
|++|+|++++ ....++.||||+++|++ +++|+||+|+++||+|||+||||+||+||||+
T Consensus 1 l~~f~Ev~~~-----~~~~~~~C~~C~~~~~~-----~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC~ 59 (59)
T 1z60_A 1 LDAFQEIPLE-----EYNGERFCYGCQGELKD-----QHVYVCAVCQNVFCVDCDVFVHDSLHSCPGCI 59 (59)
T ss_dssp CCSCCEEEHH-----HHCSCCEETTTTEECTT-----SEEECCTTTTCCBCHHHHHTTTTTSCSSSTTC
T ss_pred CCCccccCcc-----ccCCCCcccccCcccCC-----CccEECCccCcCcccchhHHHHhhccCCcCCC
Confidence 5789999753 22345689999999963 24799999999999999999999999999995
No 4
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=5.1e-16 Score=142.07 Aligned_cols=155 Identities=19% Similarity=0.244 Sum_probs=129.4
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhc---CCCCcchHHHHH
Q 015267 84 AAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL---GCSGDSSLQNAL 160 (410)
Q Consensus 84 M~~~D~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~---~~~G~~SLqnaL 160 (410)
|...|+.|+|+..++..+..|+.. .|.+++|||+|. +.+..+.|++.|...+...|..+. .+.|.+.|..||
T Consensus 24 M~~~d~~~~r~~~ak~~~~~~~~~----~~~~~v~lv~F~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~g~T~l~~al 98 (218)
T 3ibs_A 24 MLAQDVQPSRLEKAKRLISRLVDE----LDNDKVGMIVFA-GDAFTQLPITSDYISAKMFLESISPSLISKQGTAIGEAI 98 (218)
T ss_dssp GGCCSSSSCHHHHHHHHHHHHHHT----CSSCEEEEEEES-SSEEEEEEEESCHHHHHHHHHTCCGGGCCSCSCCHHHHH
T ss_pred cccccCCcCHHHHHHHHHHHHHHh----CCCCeEEEEEEC-CCceEeCCCCCCHHHHHHHHHhcCcccCCCCCCcHHHHH
Confidence 888999999999999999999975 468999999995 679999999999999888887753 247889999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh-------------------------
Q 015267 161 DLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE------------------------- 215 (410)
Q Consensus 161 ~~A~~~L~~~p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE------------------------- 215 (410)
..|...|...+ ..+++|||++..... .+++.++++.+++.+|+|++||+|.+
T Consensus 99 ~~a~~~l~~~~--~~~~~ivllTDG~~~-~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~ 175 (218)
T 3ibs_A 99 NLATRSFTPQE--GVGRAIIVITDGENH-EGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTR 175 (218)
T ss_dssp HHHHTTSCSCS--SCCEEEEEEECCTTC-CSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEEC
T ss_pred HHHHHHHhhCC--CCCcEEEEEcCCCCC-CCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEec
Confidence 99999988753 345677777744433 33788999999999999999999973
Q ss_pred --HHHHHHHHHhhCCeeEEeCC-HHHHHHHHHhc
Q 015267 216 --MFICKHLCQDTGGSYSVALD-ESHFKELIMEH 246 (410)
Q Consensus 216 --~~iLk~la~~TgG~Y~va~d-~~hl~~lL~~~ 246 (410)
...|++||+.|||.|+.+.+ .+.+..++..+
T Consensus 176 ~~~~~L~~iA~~~gG~~~~~~~~~~~~~~~~~~i 209 (218)
T 3ibs_A 176 LNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEI 209 (218)
T ss_dssp CCHHHHHHHHHHTEEEEEEECSSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEEEECCCChHHHHHHHHHH
Confidence 57899999999999999988 56666666543
No 5
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.52 E-value=7.3e-14 Score=127.65 Aligned_cols=158 Identities=15% Similarity=0.144 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEee----cCCCCHHHHHHHHhhhcC----CCCcchHHHHHH
Q 015267 90 RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT----DLGGSPESHIKALMGKLG----CSGDSSLQNALD 161 (410)
Q Consensus 90 ~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls----~ltgn~~~~i~~L~~~~~----~~G~~SLqnaL~ 161 (410)
..+++..+++.+..|+..+...++..++|||.|. +.++.+. +++.|...+.++|..+.. ..|.|.++.||.
T Consensus 29 ~~~~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~g~T~~~~aL~ 107 (223)
T 1q0p_A 29 GASNFTGAKKSLVNLIEKVASYGVKPRYGLVTYA-TYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQ 107 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEES-SSEEEEECTTSGGGGCHHHHHHHHHTCCTTSCSCTTCCCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCCceEEEEEec-CccceeeccccCCCCCHHHHHHHHHhcccccccCCCCccHHHHHH
Confidence 3446888999999999988777888999999995 6678887 667788889999987642 468899999999
Q ss_pred HHHHHHhCCCC------CCCceEEEEEeCCCCC---CcccHHHHHHH----------HHHcCeEEEEEEcchh--HHHHH
Q 015267 162 LVQGLLSQIPS------YGHREVLILYSALSTC---DPGDIMETIQK----------CKESKIRCSVIGLSAE--MFICK 220 (410)
Q Consensus 162 ~A~~~L~~~p~------~~sreILVi~~S~~t~---DpgdI~~ti~~----------akk~~IrV~vIgL~aE--~~iLk 220 (410)
.|...|...+. ...+++|||++..... ||..+.+.++. +++.+|+|++||+|.+ ...|+
T Consensus 108 ~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~igvG~~~~~~~L~ 187 (223)
T 1q0p_A 108 AVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNIN 187 (223)
T ss_dssp HHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCHHHHH
T ss_pred HHHHHhhccccccccccccCCeEEEEECCCCCCCCCChHHHHHHHHHHHhhhhhhhhcccCCcEEEEEEecCcCCHHHHH
Confidence 99999986432 2456788888855554 55555555533 3678999999999964 68999
Q ss_pred HHHHhhCC--eeEEeCCHHHHHHHHHhcCC
Q 015267 221 HLCQDTGG--SYSVALDESHFKELIMEHAP 248 (410)
Q Consensus 221 ~la~~TgG--~Y~va~d~~hl~~lL~~~~~ 248 (410)
+||..||| .|+.+.|.+.|.+++.+++.
T Consensus 188 ~iA~~~~G~~~~~~~~~~~~L~~~~~~i~~ 217 (223)
T 1q0p_A 188 ALASKKDNEQHVFKVKDMENLEDVFYQMID 217 (223)
T ss_dssp HHSCCCTTCCCEEETTC-------------
T ss_pred HHhcCCCCCceEEEcCCHHHHHHHHHHHhc
Confidence 99999999 89999999999999887763
No 6
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=99.47 E-value=1.5e-13 Score=121.88 Aligned_cols=148 Identities=13% Similarity=0.129 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhc--CCCCcchHHHHHHHHHHHHhCC
Q 015267 93 RMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL--GCSGDSSLQNALDLVQGLLSQI 170 (410)
Q Consensus 93 Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~--~~~G~~SLqnaL~~A~~~L~~~ 170 (410)
|+..+++.+..|+ +|.+++|||+| ++.++.+.|++.+...+.+.|..+. .+.|.+.++.||..|...|...
T Consensus 26 ~~~~~~~~~~~~~------~~~~~v~lv~f-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~g~T~~~~al~~a~~~l~~~ 98 (182)
T 1shu_X 26 IYNFVQQLAERFV------SPEMRLSFIVF-SSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKA 98 (182)
T ss_dssp HHHHHHHHHHHCC------CTTEEEEEEEE-SSSEEEEEEEECCHHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc------CCCceEEEEEe-CCCceEEECCCCCHHHHHHHHHhcccCCCCCCchHHHHHHHHHHHHHhc
Confidence 4445555555443 28999999999 4778999999999998888887653 3778999999999999999865
Q ss_pred CCCCCceEEEEEeCCCCCCcc--cHHHHHHHHHHcCeEEEEEEcch-hHHHHHHHHHhhCCeeEEeCCHHHHHHHHHhcC
Q 015267 171 PSYGHREVLILYSALSTCDPG--DIMETIQKCKESKIRCSVIGLSA-EMFICKHLCQDTGGSYSVALDESHFKELIMEHA 247 (410)
Q Consensus 171 p~~~sreILVi~~S~~t~Dpg--dI~~ti~~akk~~IrV~vIgL~a-E~~iLk~la~~TgG~Y~va~d~~hl~~lL~~~~ 247 (410)
+....+++|||++.....+.. .+.++++.+++.+|+|++||+|. ....|++||..|||.|++..|.+.|.+++.++.
T Consensus 99 ~~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~~~~~~L~~ia~~~~~~~~~~~~~~~L~~~~~~i~ 178 (182)
T 1shu_X 99 GGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSIL 178 (182)
T ss_dssp TGGGSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHHSSSGGGEEESSSTTHHHHHHHHHHH
T ss_pred cCCCCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCcCCHHHHHHHhCCCCceEEccCCHHHHHHHHHHHH
Confidence 333456788888755433322 24567899999999999999984 368899999999999999988888888887653
No 7
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=99.45 E-value=9e-13 Score=121.99 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHHHHhCC
Q 015267 94 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQGLLSQI 170 (410)
Q Consensus 94 l~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~lt--gn~~~~i~~L~~~~~~~G-~~SLqnaL~~A~~~L~~~ 170 (410)
+..++..+..|+..+-..++..++|||+|. +.+..+.+++ .+...++++|..+....| .+.++.||..|...|...
T Consensus 38 ~~~~k~~~~~~~~~l~~~~~~~rv~lv~F~-~~~~~~~~l~~~~~~~~~~~~i~~l~~~gG~~T~~~~aL~~a~~~l~~~ 116 (223)
T 2b2x_A 38 WESVIAFLNDLLKRMDIGPKQTQVGIVQYG-ENVTHEFNLNKYSSTEEVLVAANKIVQRGGRQTMTALGIDTARKEAFTE 116 (223)
T ss_dssp HHHHHHHHHHHHTTSCCSTTSCCEEEEEES-SSEEEEECTTTCCSHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTTSSG
T ss_pred HHHHHHHHHHHHHhcccCCCCeEEEEEEeC-CCccEEEecCCCCCHHHHHHHHHhhhccCCCCccHHHHHHHHHHHhcCc
Confidence 677888888888766445789999999995 7789999985 355677777776432345 499999999999875331
Q ss_pred ---CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh-----------HHHHHHHHHh-hCCeeEEeCC
Q 015267 171 ---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE-----------MFICKHLCQD-TGGSYSVALD 235 (410)
Q Consensus 171 ---p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE-----------~~iLk~la~~-TgG~Y~va~d 235 (410)
.....+++|||++.....+..++.++++.+++.+|+|++||+|.+ ...|++||.. |||.|+.+.|
T Consensus 117 ~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~~~~~~L~~iA~~p~~g~~~~~~~ 196 (223)
T 2b2x_A 117 ARGARRGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSD 196 (223)
T ss_dssp GGTCCTTSEEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGGGC---CCCHHHHHHHHTTSCSSGGGTEEEESS
T ss_pred ccCCCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCccccccccchhHHHHHHHHhCCCchhcEEEeCC
Confidence 123456899999876666766788999999999999999999875 3789999999 9999999999
Q ss_pred HHHHHHHHHhcC
Q 015267 236 ESHFKELIMEHA 247 (410)
Q Consensus 236 ~~hl~~lL~~~~ 247 (410)
.+.|.+++..+.
T Consensus 197 ~~~L~~i~~~i~ 208 (223)
T 2b2x_A 197 ELALVTIVKALG 208 (223)
T ss_dssp TTGGGGGHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888777666553
No 8
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=99.45 E-value=5.3e-12 Score=115.42 Aligned_cols=157 Identities=11% Similarity=0.076 Sum_probs=121.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHHH
Q 015267 90 RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQGL 166 (410)
Q Consensus 90 ~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~lt--gn~~~~i~~L~~~~~~~G-~~SLqnaL~~A~~~ 166 (410)
.++++..+++.+..|++.|--..+..++|||.|. +.+....+++ .|...+.++|.++.-..| .|.++.||..|+..
T Consensus 27 ~~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs-~~~~~~~~l~~~~~~~~~~~~i~~l~~~gg~~T~~~~aL~~a~~~ 105 (202)
T 1ijb_A 27 SEAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYH-DGSHAYIGLKDRKRPSELRRIASQVKYAGSQVASTSEVLKYTLFQ 105 (202)
T ss_dssp CHHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEES-SSEEEEECTTCCCCHHHHHHHHHTCCCCCBSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCceEEEEEEEC-CCceEEEecCCCCCHHHHHHHHHhCcCCCCCcCcHHHHHHHHHHH
Confidence 4457788888888898876434457899999995 6688889998 788888888887633334 49999999999866
Q ss_pred H-hCCCCCCCceEEEEEeCCCCCC--cccHHHHHHHHHHcCeEEEEEEcch--hHHHHHHHHHh-hCCeeEEeCCHHHHH
Q 015267 167 L-SQIPSYGHREVLILYSALSTCD--PGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLCQD-TGGSYSVALDESHFK 240 (410)
Q Consensus 167 L-~~~p~~~sreILVi~~S~~t~D--pgdI~~ti~~akk~~IrV~vIgL~a--E~~iLk~la~~-TgG~Y~va~d~~hl~ 240 (410)
+ ........+++|||++.....+ +.++.+.++.+++.+|+|++||+|. ....|++||.. ++|.++.+.|.+.|.
T Consensus 106 ~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~~~~~~~~~~~~~~~~L~ 185 (202)
T 1ijb_A 106 IFSKIDRPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEKQAPENKAFVLSSVDELE 185 (202)
T ss_dssp TSSSCSCTTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHHHHHCTTCCCEEESSGGGHH
T ss_pred HhccCCCCCCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcCCHHHHHHHhCCCCcccEEEeCCHHHHH
Confidence 5 3221234567888888555433 3478899999999999999999996 46899999986 578889999999888
Q ss_pred HHHHhcC
Q 015267 241 ELIMEHA 247 (410)
Q Consensus 241 ~lL~~~~ 247 (410)
+++.++.
T Consensus 186 ~~~~~i~ 192 (202)
T 1ijb_A 186 QQRDEIV 192 (202)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776653
No 9
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.42 E-value=2.1e-13 Score=122.80 Aligned_cols=151 Identities=15% Similarity=0.108 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCH--HHHHHHHhhhcCCCCcchHHHHHHHHHHHH-hC
Q 015267 93 RMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSP--ESHIKALMGKLGCSGDSSLQNALDLVQGLL-SQ 169 (410)
Q Consensus 93 Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~--~~~i~~L~~~~~~~G~~SLqnaL~~A~~~L-~~ 169 (410)
.+..+++.+..|+..+. ++.+++|||+|. +.+..+.+++... ..+.++|..+....|.+.++.||..|...| ..
T Consensus 26 ~~~~~~~~~~~~~~~l~--~~~~~v~lv~f~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~g~T~~~~al~~a~~~l~~~ 102 (198)
T 1n3y_A 26 NFATMMNFVRAVISQFQ--RPSTQFSLMQFS-NKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHA 102 (198)
T ss_dssp HHHHHHHHHHHHHTTSC--TTTEEEEEEEES-SSEEEEECHHHHHHCSSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSG
T ss_pred HHHHHHHHHHHHHHhcC--CCCcEEEEEEeC-CCccEEEecCccCCHHHHHHHHhcCcCCCCCchHHHHHHHHHHHHhCc
Confidence 34456667777777654 899999999996 6688888885311 234444444323678899999999999655 32
Q ss_pred C--CCCCCceEEEEEeCCCCC-CcccHHHHHHHHHHcCeEEEEEEcchhH------HHHHHHHHhhCCee-EEeCCHHHH
Q 015267 170 I--PSYGHREVLILYSALSTC-DPGDIMETIQKCKESKIRCSVIGLSAEM------FICKHLCQDTGGSY-SVALDESHF 239 (410)
Q Consensus 170 ~--p~~~sreILVi~~S~~t~-DpgdI~~ti~~akk~~IrV~vIgL~aE~------~iLk~la~~TgG~Y-~va~d~~hl 239 (410)
. .....+++|||++..... |+.++.++++.+++.+|+|++||+|.+. ..|++||..|||.| +.+.|.+.|
T Consensus 103 ~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~~~l 182 (198)
T 1n3y_A 103 SYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDAL 182 (198)
T ss_dssp GGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGG
T ss_pred ccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcCCCcccEEEeCCHHHH
Confidence 1 113456788888855544 7778889999999999999999999875 89999999999998 788888887
Q ss_pred HHHHHhc
Q 015267 240 KELIMEH 246 (410)
Q Consensus 240 ~~lL~~~ 246 (410)
.+++..+
T Consensus 183 ~~~~~~i 189 (198)
T 1n3y_A 183 KDIQNQL 189 (198)
T ss_dssp GGGHHHH
T ss_pred HHHHHHH
Confidence 7666544
No 10
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=99.42 E-value=3.5e-12 Score=115.89 Aligned_cols=152 Identities=16% Similarity=0.141 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHHHH-hC
Q 015267 94 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQGLL-SQ 169 (410)
Q Consensus 94 l~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~lt--gn~~~~i~~L~~~~~~~G-~~SLqnaL~~A~~~L-~~ 169 (410)
+..+++.+..|++.+-..++..++|||+|. +.+..+.|++ .+...++++|.++....| .+.++.||..|...| ..
T Consensus 22 ~~~~k~~~~~~~~~l~~~~~~~rvglv~f~-~~~~~~~~l~~~~~~~~~~~~i~~l~~~~G~~T~~~~al~~a~~~~~~~ 100 (200)
T 1v7p_C 22 WDAVKNFLEKFVQGLDIGPTKTQVGLIQYA-NNPRVVFNLNTYKTKEEMIVATSQTSQYGGDLTNTFGAIQYARKYAYSA 100 (200)
T ss_dssp HHHHHHHHHHHHHTSCBSTTSEEEEEEEES-SSEEEEECTTTCSSHHHHHHHHHHCCCCCCSCCCHHHHHHHHHHHTTSG
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEEEEC-CCceEEEeCCCcCCHHHHHHHHHhhhccCCCCCcHHHHHHHHHHhhccc
Confidence 667777788888766444678999999995 7789999998 467778888886532334 599999999999974 32
Q ss_pred C--CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcch-----h------HHHHHHHHHhhCCee-EEeCC
Q 015267 170 I--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA-----E------MFICKHLCQDTGGSY-SVALD 235 (410)
Q Consensus 170 ~--p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~a-----E------~~iLk~la~~TgG~Y-~va~d 235 (410)
. .....+++|||++.....|+.++.++++.+++.+|+|++||++. + ...|++||..|||.| +.+.|
T Consensus 101 ~~g~r~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igvg~~~~~~~~~~~~~~~~L~~iA~~~~g~~~~~~~~ 180 (200)
T 1v7p_C 101 ASGGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSD 180 (200)
T ss_dssp GGTCCTTSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESS
T ss_pred ccCCCCCCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEecccccccccchhhHHHHHHHHhCCccHhcEEEcCC
Confidence 1 11245678999987666777778889999999999999999953 1 356999999999976 67888
Q ss_pred HHHHHHHHHhc
Q 015267 236 ESHFKELIMEH 246 (410)
Q Consensus 236 ~~hl~~lL~~~ 246 (410)
.+.|.+++..+
T Consensus 181 ~~~l~~i~~~i 191 (200)
T 1v7p_C 181 EAALLEKAGTL 191 (200)
T ss_dssp SGGGHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877654
No 11
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.40 E-value=3.4e-12 Score=130.84 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=129.2
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEee----cCCCCHHHHHHHHhhhcC----CCCcchHHHHHH
Q 015267 90 RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT----DLGGSPESHIKALMGKLG----CSGDSSLQNALD 161 (410)
Q Consensus 90 ~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls----~ltgn~~~~i~~L~~~~~----~~G~~SLqnaL~ 161 (410)
..+|++.+++.+..|++.+-..++..++|||+|. +.++.+. +++.|...+.++|.++.. ..|.+.|+.||.
T Consensus 15 ~~~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~g~T~~~~al~ 93 (497)
T 1rrk_A 15 GASNFTGAKKVLVNLIEKVASYGVKPRYGLVTYA-TYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQ 93 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-SSEEEEECTTSGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhhccCCCceEEEEEec-CCceEeeccccccccCHHHHHHHHHhCcCccccccCccCHHHHHH
Confidence 3479999999999999998778889999999996 7788888 778889999999987641 467899999999
Q ss_pred HHHHHHhCCCC------CCCceEEEEEeCCCCCCcccHHHHHHHHHHc-------------CeEEEEEEcchh--HHHHH
Q 015267 162 LVQGLLSQIPS------YGHREVLILYSALSTCDPGDIMETIQKCKES-------------KIRCSVIGLSAE--MFICK 220 (410)
Q Consensus 162 ~A~~~L~~~p~------~~sreILVi~~S~~t~DpgdI~~ti~~akk~-------------~IrV~vIgL~aE--~~iLk 220 (410)
.|...|..... ...+++|||++.....+.++...+++.+++. +|+|++||+|.+ ...|+
T Consensus 94 ~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~igvG~~~~~~~L~ 173 (497)
T 1rrk_A 94 AVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNIN 173 (497)
T ss_dssp HHHHHHCCC------CGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHHHHH
T ss_pred HHHHHhhhhhccccccccccceEEEEEeCCCcccCCChhHHHHHHHHHhhhhcccccchhcCeeEEEecCCCccCHHHHH
Confidence 99999964322 2356788888866555544666666666666 999999999964 58999
Q ss_pred HHHHhhCC--eeEEeCCHHHHHHHHHhcCC
Q 015267 221 HLCQDTGG--SYSVALDESHFKELIMEHAP 248 (410)
Q Consensus 221 ~la~~TgG--~Y~va~d~~hl~~lL~~~~~ 248 (410)
+||..||| .|+.+.|.+.|.+++...+.
T Consensus 174 ~iA~~~~g~~~~~~~~~~~~l~~~~~~~i~ 203 (497)
T 1rrk_A 174 ALASKKDNEQHVCKVKDMECLEDVFYQMID 203 (497)
T ss_dssp HHSCCCTTCCCEEETTCHHHHHHHHHHHSC
T ss_pred HHhcCCCCcceEEEeCCHHHHhhhhhhccc
Confidence 99999999 99999999999999987653
No 12
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=99.38 E-value=1.1e-11 Score=118.60 Aligned_cols=152 Identities=16% Similarity=0.122 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCC----HHHHHHHHhhhc---CCCCcchHHHHHHHHHHHHh
Q 015267 96 VVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS----PESHIKALMGKL---GCSGDSSLQNALDLVQGLLS 168 (410)
Q Consensus 96 ~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn----~~~~i~~L~~~~---~~~G~~SLqnaL~~A~~~L~ 168 (410)
.+++.+..|+..|-..++..++|||+|. +.+..+.+|+.. ...+.++|.++. ...|.+.++.||..|...|.
T Consensus 39 ~~k~~~~~lv~~l~~~~~~~rvglv~Fs-~~~~~~~~l~~~~~~~~~~~~~~i~~l~~~~~~~G~T~~~~AL~~a~~~l~ 117 (266)
T 4hqo_A 39 KVIPMLNGLINSLSLSRDTINLYMNLFG-SYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLN 117 (266)
T ss_dssp THHHHHHHHHHTCCBCTTSEEEEEEEES-SSEEEEECTTSHHHHCHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCcEEEEEEec-CCcceEEecCCCCccCHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHh
Confidence 5677788888887656789999999996 668889999864 677888887763 57888999999999999988
Q ss_pred CC-CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh--HHHHHHHHHhh--CC--eeEEeCCHHHHHH
Q 015267 169 QI-PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDT--GG--SYSVALDESHFKE 241 (410)
Q Consensus 169 ~~-p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE--~~iLk~la~~T--gG--~Y~va~d~~hl~~ 241 (410)
.. .....+++|||++.....|+.++.++++.+++.+|+|++||+|.. ..+|++||..+ +| .|+.+.|.+.|.+
T Consensus 118 ~~~~r~~~~~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~~~~~L~~iA~~~~~~g~~~~~~~~d~~~L~~ 197 (266)
T 4hqo_A 118 DRVNREKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSYADWNEAVA 197 (266)
T ss_dssp TTCSCTTSEEEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSCCHHHHHHHHTCCTTCSSCTTEECSCHHHHHH
T ss_pred hccccCCCCeEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCcccCHHHHHHhhCCCCCCCCCCeEEecCHHHHHH
Confidence 64 223456799999877667888899999999999999999999975 57889999875 33 7888889999998
Q ss_pred HHHhcCC
Q 015267 242 LIMEHAP 248 (410)
Q Consensus 242 lL~~~~~ 248 (410)
++..++.
T Consensus 198 i~~~l~~ 204 (266)
T 4hqo_A 198 LIKPFIA 204 (266)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8877663
No 13
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=99.38 E-value=7.4e-13 Score=119.48 Aligned_cols=154 Identities=10% Similarity=0.054 Sum_probs=119.1
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCC--CHHHHHHHHhhhcCCCCcchHHHHHHHHHHHH
Q 015267 90 RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGCSGDSSLQNALDLVQGLL 167 (410)
Q Consensus 90 ~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltg--n~~~~i~~L~~~~~~~G~~SLqnaL~~A~~~L 167 (410)
.++++..+++.+..|+..+- ++..++|||.|. +.+..+.+++. +...+.++|.++....|.+.++.||..|...|
T Consensus 19 ~~~~~~~~k~~~~~~~~~l~--~~~~~v~vv~f~-~~~~~~~~l~~~~~~~~~~~~i~~l~~~~g~T~~~~aL~~a~~~l 95 (194)
T 1mf7_A 19 IPHDFRRMKEFVSTVMEQLK--KSKTLFSLMQYS-EEFRIHFTFKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVREL 95 (194)
T ss_dssp CHHHHHHHHHHHHHHHHHHC--CTTEEEEEEEES-SSEEEEECHHHHHHSCCHHHHHTTCCCCCSCBCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHhcC--CCCeEEEEEEec-CCceEEEecCCcCCHHHHHHHHHhCcCCCCCchHHHHHHHHHHHh
Confidence 44577888888999998764 667899999995 77888898875 33456677766533578899999999999766
Q ss_pred hCC---CCCCCceEEEEEeCCCCC-CcccHHHHHHHHHHcCeEEEEEEcchhH------HHHHHHHHhh-CCeeEEeCCH
Q 015267 168 SQI---PSYGHREVLILYSALSTC-DPGDIMETIQKCKESKIRCSVIGLSAEM------FICKHLCQDT-GGSYSVALDE 236 (410)
Q Consensus 168 ~~~---p~~~sreILVi~~S~~t~-DpgdI~~ti~~akk~~IrV~vIgL~aE~------~iLk~la~~T-gG~Y~va~d~ 236 (410)
... .....+++|||++..... |+.++.++++.+++.+|+|++||+|.+. ..|++||..+ +|.|+.+.|.
T Consensus 96 ~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~L~~iA~~~~~~~~~~~~~~ 175 (194)
T 1mf7_A 96 FNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNF 175 (194)
T ss_dssp TSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESSG
T ss_pred cCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccccccccHHHHHHHhCCCCcccEEEeCCH
Confidence 431 112345788888855554 7777778899999999999999999874 7899999986 5888889898
Q ss_pred HHHHHHHHhc
Q 015267 237 SHFKELIMEH 246 (410)
Q Consensus 237 ~hl~~lL~~~ 246 (410)
+.|.+++..+
T Consensus 176 ~~l~~~~~~i 185 (194)
T 1mf7_A 176 EALKTIQNQL 185 (194)
T ss_dssp GGGGGGHHHH
T ss_pred HHHHHHHHHH
Confidence 8877766554
No 14
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=99.37 E-value=4.9e-12 Score=133.83 Aligned_cols=151 Identities=14% Similarity=0.078 Sum_probs=116.9
Q ss_pred HhcCCC-CCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCe-------------eEEeecCCCCHHHHHHHHhhhcC
Q 015267 84 AAEMDF-RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV-------------ANCLTDLGGSPESHIKALMGKLG 149 (410)
Q Consensus 84 M~~~D~-~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~-------------Ae~ls~ltgn~~~~i~~L~~~~~ 149 (410)
|.+.|+ .||||+++++++..|+......+|.++||||+|.... ...+.+|+..-.+.++.|...+.
T Consensus 20 M~~~d~~~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~~~~~~~plt~d~~y~~i~vl~~l~~~~~~~l~~l~~~l~ 99 (565)
T 1jey_B 20 MSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGDQYQNITVHRHLMLPDFDLLEDIESKIQ 99 (565)
T ss_dssp GGCCBTTBCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCTTTCSTTEEEEEEEECCCHHHHHHHHTTCC
T ss_pred hcccCCCCCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEccCCCCCccccccCCCceEEeecCCCCCHHHHHHHHhhcc
Confidence 888888 8999999999999999988889999999999996332 12556666555677788887333
Q ss_pred C-CCcchHHHHHHHHHHHHhCC--CCCCCceEEEEEeCC-CCCCcccHHHHHHHHHHcCeEEE-EEEcchh---------
Q 015267 150 C-SGDSSLQNALDLVQGLLSQI--PSYGHREVLILYSAL-STCDPGDIMETIQKCKESKIRCS-VIGLSAE--------- 215 (410)
Q Consensus 150 ~-~G~~SLqnaL~~A~~~L~~~--p~~~sreILVi~~S~-~t~DpgdI~~ti~~akk~~IrV~-vIgL~aE--------- 215 (410)
+ .++++|.+||.+|..+|++. +.+..+++|||++.. .+.+..++.++++.|++.||+|+ |||++..
T Consensus 100 ~~~~~t~i~~al~~A~~~l~~~~~~~k~~~krIiLlTDg~~~~~~~~~~~~a~~l~~~gI~i~~vig~g~~~~~~~~~~~ 179 (565)
T 1jey_B 100 PGSQQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRG 179 (565)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHSSSSCCSEEEEEEECCCCSCCCCTTHHHHHHHHHHTTEEEEEEESSCCC---------
T ss_pred CCCccccHHHHHHHHHHHHHHHhhcccccccEEEEEeCCCCCCCHHHHHHHHHHHHhcCcEEEEEeccCCCcCCcccccc
Confidence 3 36799999999999999875 333344555665533 33456678899999999999999 8988742
Q ss_pred -------------------------HHHHHHHHHhhCC-----eeEEeC
Q 015267 216 -------------------------MFICKHLCQDTGG-----SYSVAL 234 (410)
Q Consensus 216 -------------------------~~iLk~la~~TgG-----~Y~va~ 234 (410)
..+|++|++.||| .|+.+.
T Consensus 180 ~~~~~~~~~~~~f~~~~~~~~~~~~e~~L~~ia~~~~G~~~~s~~~~~~ 228 (565)
T 1jey_B 180 DGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFS 228 (565)
T ss_dssp -CCCCTTCSSCCCCTTTSCHHHHHHHHHHHHHHHHHHCGGGGGGEEEHH
T ss_pred cccccccccccccchhccccchhhhHHHHHHHHHhcCCCcccceeecHH
Confidence 2469999999999 898874
No 15
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=99.37 E-value=2.4e-11 Score=109.25 Aligned_cols=152 Identities=11% Similarity=0.121 Sum_probs=117.9
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecC--CCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 015267 89 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDL--GGSPESHIKALMGKLGCSGDSSLQNALDLVQGL 166 (410)
Q Consensus 89 ~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~l--tgn~~~~i~~L~~~~~~~G~~SLqnaL~~A~~~ 166 (410)
+.++|++.+++.+..|+..+-......++|||.| ++.+..+.|+ +.|...+.++|..+....|.+.++.||..|...
T Consensus 18 m~~~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~~g~T~~~~aL~~a~~~ 96 (189)
T 1atz_A 18 FPASYFDEMKSFAKAFISKANIGPRLTQVSVLQY-GSITTIDVPWNVVPEKAHLLSLVDVMQREGGPSQIGDALGFAVRY 96 (189)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEE-SSSEEEEECTTCCCCHHHHHHHHHTCCCCCCCCCHHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHHhcCcCCCCeEEEEEEE-CCcceEEEecCCCCCHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 3457888899999999987533345589999999 4778999999 889999999998764346889999999999999
Q ss_pred HhCCC---CCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh--HHHHHHHHHhhCCee-EEeCCHHHHH
Q 015267 167 LSQIP---SYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDTGGSY-SVALDESHFK 240 (410)
Q Consensus 167 L~~~p---~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE--~~iLk~la~~TgG~Y-~va~d~~hl~ 240 (410)
|.... ..+.++++||++++... .++.++++.+++.+|+|++||+|.+ ...|+.||..++|.| +.+.+.+.|.
T Consensus 97 l~~~~~g~r~~~~~~vivltdg~~~--~~~~~~~~~~~~~gi~v~~igvG~~~~~~~L~~iA~~~~~~~~~~~~~~~~~~ 174 (189)
T 1atz_A 97 LTSEMHGARPGASKAVVILVTDVSV--DSVDAAADAARSNRVTVFPIGIGDRYDAAQLRILAGPAGDSNVVKLQRIEDLP 174 (189)
T ss_dssp HHSCCTTCCTTSEEEEEEEECSCCS--SCCHHHHHHHHHTTEEEEEEEESSSSCHHHHHHHTGGGGGGGCEEESSTTHHH
T ss_pred HhccccCCCCCCCcEEEEEeCCCCC--chHHHHHHHHHHCCCEEEEEEcCCcCCHHHHHHHHCCCcccCEEEecChhhHH
Confidence 87631 12345666666544443 2467889999999999999999974 679999999998754 5666777777
Q ss_pred HHH
Q 015267 241 ELI 243 (410)
Q Consensus 241 ~lL 243 (410)
.+.
T Consensus 175 ~l~ 177 (189)
T 1atz_A 175 TMV 177 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 16
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=99.36 E-value=8.3e-12 Score=114.51 Aligned_cols=151 Identities=15% Similarity=0.159 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHHHHhCC
Q 015267 94 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQGLLSQI 170 (410)
Q Consensus 94 l~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~lt--gn~~~~i~~L~~~~~~~G-~~SLqnaL~~A~~~L~~~ 170 (410)
+..++..+..|+..+-..++..++|||+|. +.+..+.|++ .+...++++|..+....| .+.++.||..|...|...
T Consensus 23 ~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~-~~~~~~~~l~~~~~~~~~~~~i~~l~~~~G~~T~~~~aL~~a~~~l~~~ 101 (213)
T 1pt6_A 23 WDSVTAFLNDLLKRMDIGPKQTQVGIVQYG-ENVTHEFNLNKYSSTEEVLVAAKKIVQRGGRQTMTALGTDTARKEAFTE 101 (213)
T ss_dssp HHHHHHHHHHHHTTSCBSTTSBEEEEEEES-SSEEEEECTTTCSSHHHHHHHHHTCCCCCCSSCCHHHHHHHHHHTTTSG
T ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEEEEeC-CCccEEEeccccCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHhcCc
Confidence 556667777777655335789999999995 7788999985 356677777776432345 489999999999875321
Q ss_pred ---CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh-----------HHHHHHHHHh-hCCeeEEeCC
Q 015267 171 ---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE-----------MFICKHLCQD-TGGSYSVALD 235 (410)
Q Consensus 171 ---p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE-----------~~iLk~la~~-TgG~Y~va~d 235 (410)
.....+++|||++.....+..++.++++.+++.+|+|++||+|.. ...|++||.. |||.|+.+.|
T Consensus 102 ~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig~~~~~~~~~~~~~~~~L~~iA~~~~~g~~~~~~~ 181 (213)
T 1pt6_A 102 ARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSD 181 (213)
T ss_dssp GGTCCTTCEEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESS
T ss_pred ccCCCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEeccccccccccchhhHHHHHHHhCCCchhcEEEeCC
Confidence 123456788888866666655677889999999999999999975 3689999999 8999999989
Q ss_pred HHHHHHHHHh
Q 015267 236 ESHFKELIME 245 (410)
Q Consensus 236 ~~hl~~lL~~ 245 (410)
.+.|.+++..
T Consensus 182 ~~~l~~i~~~ 191 (213)
T 1pt6_A 182 ELALVTIVKT 191 (213)
T ss_dssp GGGGGGGHHH
T ss_pred HHHHHHHHHH
Confidence 8877666554
No 17
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=99.36 E-value=1.2e-11 Score=118.85 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCC----HHHHHHHHhhhc---CCCCcchHHHHHHHHHHH
Q 015267 94 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS----PESHIKALMGKL---GCSGDSSLQNALDLVQGL 166 (410)
Q Consensus 94 l~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn----~~~~i~~L~~~~---~~~G~~SLqnaL~~A~~~ 166 (410)
+..+++.+..|+..+-..+...++|||+|. ..+..+.+++.. ...+.++|..+. ...|.+.++.||..|...
T Consensus 40 ~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs-~~~~~~~~l~~~~~~~~~~l~~~i~~l~~~~~~~G~T~~~~aL~~a~~~ 118 (281)
T 4hqf_A 40 VNHAVPLAMKLIQQLNLNDNAIHLYASVFS-NNAREIIRLHSDASKNKEKALIIIKSLLSTNLPYGKTSLTDALLQVRKH 118 (281)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSEEEEEEEEE-TTEEEEEEECSSCSSCHHHHHHHHHHHHHTTGGGCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCcEEEEEEcC-CCceEEEEccccCccCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHHH
Confidence 366788888888876555668999999996 667888888764 677877777653 357889999999999998
Q ss_pred HhCCC-CCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh--HHHHHHHHHh--hCC--eeEEeCCHHHH
Q 015267 167 LSQIP-SYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQD--TGG--SYSVALDESHF 239 (410)
Q Consensus 167 L~~~p-~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE--~~iLk~la~~--TgG--~Y~va~d~~hl 239 (410)
|.... ....+++|||++.....|+.++.++++.|++.||+|++||+|.. ...|++||.. ||| .|+.+.|.+.|
T Consensus 119 l~~~~~r~~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~~~~~~g~~~~~~~~~~~~L 198 (281)
T 4hqf_A 119 LNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWENV 198 (281)
T ss_dssp HHTSCCCTTCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTTSCSSSSCCTTEEEECGGGH
T ss_pred HHhccCCCCCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhCCCCCCCCCceEEecchhhh
Confidence 87642 23356799999877667877899999999999999999999974 5889999977 676 88888898888
Q ss_pred HHHHHhc
Q 015267 240 KELIMEH 246 (410)
Q Consensus 240 ~~lL~~~ 246 (410)
.+++..+
T Consensus 199 ~~~~~~l 205 (281)
T 4hqf_A 199 KNVIGPF 205 (281)
T ss_dssp HHHHHHH
T ss_pred hcccCCc
Confidence 7766544
No 18
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=99.32 E-value=2.9e-11 Score=125.33 Aligned_cols=151 Identities=13% Similarity=0.154 Sum_probs=118.1
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCC--------CCHHHHHHHHhhhcCCCCcchHHHHH
Q 015267 89 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--------GSPESHIKALMGKLGCSGDSSLQNAL 160 (410)
Q Consensus 89 ~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~lt--------gn~~~~i~~L~~~~~~~G~~SLqnaL 160 (410)
..++||..+++++..|++. ..|.+++|||+|. +.+..+.|++ .|...+.+.|..+ .+.|.+.|..||
T Consensus 92 ~~~~rl~~ak~a~~~ll~~---L~~~drv~lV~Fs-~~a~~~~p~t~~l~~~~~~~~~~l~~~I~~L-~~~GgT~l~~aL 166 (464)
T 4fx5_A 92 YPRTKMMAAKEATKVAIDT---LTDGAFFAVVAGT-EGARVVYPTGGQLLRADYQSRAAAKEAVGRL-HANGGTAMGRWL 166 (464)
T ss_dssp TTTHHHHHHHHHHHHHHHH---SCTTCEEEEEEES-SSEEEEESSSSSCEECSHHHHHHHHHHHHTC-CCCSCCCHHHHH
T ss_pred CCCchHHHHHHHHHHHHHh---CCCCCEEEEEEEc-CceEEEecCCcccccCCHHHHHHHHHHHHcC-CCCCCCcHHHHH
Confidence 3489999999999999986 4688999999994 7899999986 4556666677664 678889999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEEeCCCCCC--cccHHHHHHHHHHcCeEEEEEEcchh--HHHHHHHHHhhCCeeEEeCCH
Q 015267 161 DLVQGLLSQIPSYGHREVLILYSALSTCD--PGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDTGGSYSVALDE 236 (410)
Q Consensus 161 ~~A~~~L~~~p~~~sreILVi~~S~~t~D--pgdI~~ti~~akk~~IrV~vIgL~aE--~~iLk~la~~TgG~Y~va~d~ 236 (410)
..|...|...+ ...++|||++.....+ +..+..+++ +.+.+|+|++||+|.+ ...|++||+.|||.|+.+.|.
T Consensus 167 ~~A~~~l~~~~--~~~~~IILLTDG~~~~~~~~~l~~~~~-a~~~~i~i~tiGiG~~~d~~~L~~IA~~tgG~~~~v~d~ 243 (464)
T 4fx5_A 167 AQAGRIFDTAP--SAIKHAILLTDGKDESETPADLARAIQ-SSIGNFTADCRGIGEDWEPKELRKIADALLGTVGIIRDP 243 (464)
T ss_dssp HHHHHHHTTCT--TSEEEEEEEESSCCTTSCHHHHHHHHH-HHTTTCEEEEEEESSSSCHHHHHHHHHHTTCCEEEESSG
T ss_pred HHHHHHHhcCC--CCCCEEEEEcCCCCCCCChHHHHHHHH-HhcCCCeEEEEEeCCccCHHHHHHHHHhCCCEEEEcCCH
Confidence 99999998754 4456777777444332 223334333 4568999999999965 589999999999999999999
Q ss_pred HHHHHHHHhcC
Q 015267 237 SHFKELIMEHA 247 (410)
Q Consensus 237 ~hl~~lL~~~~ 247 (410)
+.|.+.|..++
T Consensus 244 ~~L~~~f~~i~ 254 (464)
T 4fx5_A 244 ATLAEDFREMT 254 (464)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88777665554
No 19
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.28 E-value=2e-11 Score=108.45 Aligned_cols=147 Identities=11% Similarity=0.117 Sum_probs=110.3
Q ss_pred HHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhc--CCCCcchHHHHHHHHHHHHhC--CCC
Q 015267 97 VAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL--GCSGDSSLQNALDLVQGLLSQ--IPS 172 (410)
Q Consensus 97 ~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~--~~~G~~SLqnaL~~A~~~L~~--~p~ 172 (410)
.++.++.++..| .+|..++|||.|. ..++.+.|++.|...+..+|..+. .+.|.+.++.||..|...|.. .+.
T Consensus 27 ~~~~~~~~~~~~--~~~~~~v~lv~f~-~~~~~~~~l~~~~~~~~~~i~~l~~~~~~g~T~~~~al~~a~~~l~~~~~~~ 103 (185)
T 3n2n_F 27 IYYFVEQLAHKF--ISPQLRMSFIVFS-TRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQG 103 (185)
T ss_dssp HHHHHHHHHHHC--CCTTEEEEEEEES-SSEEEEEEEECCHHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHh--CCCCcEEEEEEEe-cCceEEeccCCCHHHHHHHHHHHhhhcCCCCccHHHHHHHHHHHHhhccccC
Confidence 344555555555 3578999999995 778999999999999988888764 368889999999999998842 222
Q ss_pred CCCceEEEEEeCCCCCCcc--cHHHHHHHHHHcCeEEEEEEcch-hHHHHHHHHHhhCCeeEEeCC-HHHHHHHHHhcC
Q 015267 173 YGHREVLILYSALSTCDPG--DIMETIQKCKESKIRCSVIGLSA-EMFICKHLCQDTGGSYSVALD-ESHFKELIMEHA 247 (410)
Q Consensus 173 ~~sreILVi~~S~~t~Dpg--dI~~ti~~akk~~IrV~vIgL~a-E~~iLk~la~~TgG~Y~va~d-~~hl~~lL~~~~ 247 (410)
...+++||+++.....+.. ++.+.++.+++.+|+|++||+|. ....|++||...++.|. +.| .+.|.+++.+++
T Consensus 104 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg~~~~~~L~~iA~~~~~~~~-~~~~~~~L~~~~~~i~ 181 (185)
T 3n2n_F 104 YRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFP-VNDGFQALQGIIHSIL 181 (185)
T ss_dssp BCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECSSCCHHHHTTTSSSGGGEEE-HHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEeccCCHHHHHHHhCCCCCeEE-eccHHHHHHHHHHHHH
Confidence 3356788888855443332 34688999999999999999994 35789999976655554 445 788888776653
No 20
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=99.26 E-value=8.8e-14 Score=124.85 Aligned_cols=155 Identities=13% Similarity=0.127 Sum_probs=120.4
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHHhC
Q 015267 90 RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQ 169 (410)
Q Consensus 90 ~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~~~~G~~SLqnaL~~A~~~L~~ 169 (410)
.++|+..++..+..|+... .+|.+++|||+|.+..++.+.|++.+...+.+.|..+ .+.|.|.|..||..|+..|..
T Consensus 19 ~~~~~~~~k~~~~~~~~~~--~~~~~~v~lv~f~~~~~~~~~~~~~~~~~~~~~i~~l-~~~g~T~~~~al~~a~~~l~~ 95 (189)
T 2x31_A 19 AVARLSEAKGAVELLLGRA--YAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGL-PGGGGTPLASGMEMAMVTAKQ 95 (189)
T ss_dssp CC--CHHHHHHHHHHHHHS--CTTTSCCCEEEESBSCCCBCTTTCSCHHHHHHHHHHC-CCCBCCCCHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHh--cCCCcEEEEEEECCCCceEecCCCCCHHHHHHHHhcC-CCCCCCCHHHHHHHHHHHHHh
Confidence 3679999999999999764 4789999999997667899999999999988888775 677889999999999999987
Q ss_pred CCCCCCceEEEEEeCCCCCCcc-----------cHHHHHHHHHHcCeEEEEEEcchh-HHHHHHHHHhhCCeeEEeCCH-
Q 015267 170 IPSYGHREVLILYSALSTCDPG-----------DIMETIQKCKESKIRCSVIGLSAE-MFICKHLCQDTGGSYSVALDE- 236 (410)
Q Consensus 170 ~p~~~sreILVi~~S~~t~Dpg-----------dI~~ti~~akk~~IrV~vIgL~aE-~~iLk~la~~TgG~Y~va~d~- 236 (410)
.+....+++|||++.....++. ++.+.++.+++.+|+|++||++.. ...|++||..|||.|+.+.|.
T Consensus 96 ~~~~~~~~~ivliTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~ig~g~~~~~~L~~iA~~~~G~~~~~~~~~ 175 (189)
T 2x31_A 96 ARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRAT 175 (189)
T ss_dssp CTTTCSSEEEEECCBSCCSSCCTHHHHHGGGTCCCEEEEECTGGGGSCCTHHHHHHSSCSSSCSTTTEEEESSTTTHHHH
T ss_pred ccCCCCceEEEEECCCCCCCCCCccccccchhHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHhcCCeEEECCCcc
Confidence 6444556788888744433321 223456778899999999999875 678999999999999987544
Q ss_pred -HHHHHHHHhcC
Q 015267 237 -SHFKELIMEHA 247 (410)
Q Consensus 237 -~hl~~lL~~~~ 247 (410)
+.|.+++...+
T Consensus 176 ~~~~~~~~~~~~ 187 (189)
T 2x31_A 176 AHKMADVLGAAL 187 (189)
T ss_dssp HHHHHHHHHHCC
T ss_pred hHHHHHHHHHhh
Confidence 34666665443
No 21
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.21 E-value=7.7e-11 Score=126.55 Aligned_cols=158 Identities=15% Similarity=0.141 Sum_probs=123.4
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCC----CHHHHHHHHhhhcC----CCCcchHHHHH
Q 015267 89 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKALMGKLG----CSGDSSLQNAL 160 (410)
Q Consensus 89 ~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltg----n~~~~i~~L~~~~~----~~G~~SLqnaL 160 (410)
|.++.+..+++.+..||+.+-......|+|||+|. +.+..+.+++. |...++++|.++.- ..|.+.++.||
T Consensus 256 M~~~~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f~-~~~~~~~~l~~~~~~~~~~~~~~i~~l~~~~~~~~ggT~~~~aL 334 (741)
T 3hrz_D 256 IGASDFTGAKKCLVNLIEKVASYGVKPRYGLVTYA-TYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKAL 334 (741)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-SSEEEEECTTSGGGGCHHHHHHHHTTCCGGGGSSSCCCCHHHHH
T ss_pred ccccchHHHHHHHHHHHHhhhccCCCceEEEEEec-cCCceeEeecccCCcCHHHHHHHHHhcccccccCCCChHHHHHH
Confidence 44567889999999999998777777999999995 78999999998 88889999987631 67889999999
Q ss_pred HHHHHHHhCCCC------CCCceEEEEEeCCCCCCcccHHHHHH-------------HHHHcCeEEEEEEcch--hHHHH
Q 015267 161 DLVQGLLSQIPS------YGHREVLILYSALSTCDPGDIMETIQ-------------KCKESKIRCSVIGLSA--EMFIC 219 (410)
Q Consensus 161 ~~A~~~L~~~p~------~~sreILVi~~S~~t~DpgdI~~ti~-------------~akk~~IrV~vIgL~a--E~~iL 219 (410)
..|+..|..... ...+++|||++....+..++...+++ .+++.+|+|++||+|. ....|
T Consensus 335 ~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g~~p~~~~~~i~~~~~~~~~a~~~~~~gi~i~~igvG~~~~~~~L 414 (741)
T 3hrz_D 335 QAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNI 414 (741)
T ss_dssp HHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCTTCCCGGGEEEEEEECSSSCCHHHH
T ss_pred HHHHHHHhhhhhccccchhccCeEEEEECCCccccCCCchHHHHHHHHHhhcccccccccccCeeEEEEeCCCcCCHHHH
Confidence 999999942211 12356888888554443333333332 5678999999999994 56889
Q ss_pred HHHHHhhCCe--eEEeCCHHHHHHHHHhcC
Q 015267 220 KHLCQDTGGS--YSVALDESHFKELIMEHA 247 (410)
Q Consensus 220 k~la~~TgG~--Y~va~d~~hl~~lL~~~~ 247 (410)
++||..++|. |+.+.|.+.|.+++..++
T Consensus 415 ~~ia~~~~g~~~~~~~~~~~~L~~~~~~l~ 444 (741)
T 3hrz_D 415 NALASKKDNEQHVFKVKDMENLEDVFYQMI 444 (741)
T ss_dssp HHHSCCCTTCCCEECBSSHHHHHHHHHHHH
T ss_pred HHHhcCCCCcceEEEeCCHHHHHHHHHHhh
Confidence 9999999995 888999998888877643
No 22
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.19 E-value=9.6e-11 Score=120.71 Aligned_cols=156 Identities=12% Similarity=0.104 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCC----CHHHHHHHHhhhcCC----CCcchHHHHHHH
Q 015267 91 PSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKALMGKLGC----SGDSSLQNALDL 162 (410)
Q Consensus 91 P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltg----n~~~~i~~L~~~~~~----~G~~SLqnaL~~ 162 (410)
.++++.+++.+..|++.+-..++..++|||+|. +.+..+.|++. |...+.++|.++... .|.+.+..||..
T Consensus 24 ~~~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f~-~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~ggT~~~~aL~~ 102 (509)
T 2odp_A 24 ENDFLIFKESASLMVDRIFSFEINVSVAIITFA-SEPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNS 102 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEES-SSEEEEECTTSGGGGCHHHHHHHHHTCCGGGGTTCCSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhhccCCCceEEEEEcc-CCCceeEeccCCCCCCHHHHHHHHHhcccccCCCCCCccHHHHHHH
Confidence 346788889999999887666899999999995 78999999876 888999999876321 488999999999
Q ss_pred HHHHHhCCC---C------CCCceEEEEEeCCCCCCcccHHHHHHHHH---------HcCeEEEEEEcchh---HHHHHH
Q 015267 163 VQGLLSQIP---S------YGHREVLILYSALSTCDPGDIMETIQKCK---------ESKIRCSVIGLSAE---MFICKH 221 (410)
Q Consensus 163 A~~~L~~~p---~------~~sreILVi~~S~~t~DpgdI~~ti~~ak---------k~~IrV~vIgL~aE---~~iLk~ 221 (410)
|...|.... . ...+++|||++.....+..+...+++.++ +.+|+|++||+|.. ...|++
T Consensus 103 a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~~~~~~~L~~ 182 (509)
T 2odp_A 103 VYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNE 182 (509)
T ss_dssp HHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCCCSSSCTHHHHHHHHHHTTCCSTTGGGEEEEEEEESSSCCCHHHHHH
T ss_pred HHHHHhhcccccccccccccccceEEEEECCCCccCCCChhHHHHHHHHHhhccccccCceEEEEEEcCCCcccHHHHHh
Confidence 999995321 0 12457888888555554455555666655 88999999999874 689999
Q ss_pred HHHhhCCe--eEEeCCHHHHHHHHHhcC
Q 015267 222 LCQDTGGS--YSVALDESHFKELIMEHA 247 (410)
Q Consensus 222 la~~TgG~--Y~va~d~~hl~~lL~~~~ 247 (410)
||..+||. |+.+.|.+.|.+++..++
T Consensus 183 iA~~~~G~~~~~~~~~~~~l~~~~~~i~ 210 (509)
T 2odp_A 183 LGSKKDGERHAFILQDTKALHQVFEHML 210 (509)
T ss_dssp HSCCCTTCCCEEEESSHHHHHHHHHHHE
T ss_pred hccCCCCceeeEEecCHHHHHHHHHhhh
Confidence 99999998 889999999999998774
No 23
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=99.15 E-value=4.7e-10 Score=100.29 Aligned_cols=127 Identities=10% Similarity=0.015 Sum_probs=98.6
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCC----CHHHHHHHHhhhcCCCCcchHHHHHHHHH
Q 015267 89 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKALMGKLGCSGDSSLQNALDLVQ 164 (410)
Q Consensus 89 ~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltg----n~~~~i~~L~~~~~~~G~~SLqnaL~~A~ 164 (410)
+.++++..+++.+..|+..|-..++..++|||+|. +.+..+.+++. +...+.++|.++....|.+.++.||..|.
T Consensus 30 m~~~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~-~~~~~~~~l~~~~~~~~~~~~~~i~~l~~~~g~T~~~~aL~~a~ 108 (178)
T 2xgg_A 30 IGIQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYS-TDVHLQWDLQSPNAVDKQLAAHAVLDMPYKKGSTNTSDGLKACK 108 (178)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEES-SSEEEEECTTSGGGSCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeC-CceEEEEeCCCCCccCHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 34567888888899999875333556899999995 77889999987 77888888887644678899999999999
Q ss_pred HHHhCC---CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchhH
Q 015267 165 GLLSQI---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM 216 (410)
Q Consensus 165 ~~L~~~---p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE~ 216 (410)
..|... .....+++|||++.....+..++.++++.+++.+|+|++||+|.++
T Consensus 109 ~~l~~~~~g~r~~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 109 QILFTGSRPGREHVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp HHHHHCCCTTCTTSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred HHhcCcccCCCCCCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 987432 1134567899998666566556778999999999999999999764
No 24
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=98.98 E-value=4.1e-10 Score=100.90 Aligned_cols=149 Identities=13% Similarity=0.114 Sum_probs=106.3
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCH--HHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 015267 89 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSP--ESHIKALMGKLGCSGDSSLQNALDLVQGL 166 (410)
Q Consensus 89 ~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~--~~~i~~L~~~~~~~G~~SLqnaL~~A~~~ 166 (410)
+.+.++..+++.+..|+..+ ..+..++|||.|. +.+....+++... ..+.+.+..+....|.|.++.||..|...
T Consensus 15 m~~~~~~~~k~~~~~~~~~l--~~~~~rv~vv~fs-~~~~~~~~l~~~~~~~~~~~~~~~i~~~~g~T~~~~aL~~a~~~ 91 (179)
T 1mjn_A 15 LQPDEFQKILDFMKDVMKKC--SNTSYQFAAVQFS-TSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATE 91 (179)
T ss_dssp CCHHHHHHHHHHHHHHHHHT--TTSSEEEEEEEES-SSEEEEECHHHHHHHCCHHHHHTTCCCCCBCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh--CCCCeEEEEEEEC-CceeEEEcCcccCCHHHHHHHHHhcccCCCCChHHHHHHHHHHH
Confidence 34567788888899999886 3445699999995 7788888887422 12444554443346889999999999965
Q ss_pred H-hCC--CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchhH------HHHHHHHHhhCCe-eEEeCCH
Q 015267 167 L-SQI--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM------FICKHLCQDTGGS-YSVALDE 236 (410)
Q Consensus 167 L-~~~--p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE~------~iLk~la~~TgG~-Y~va~d~ 236 (410)
+ ... ...+.+++||+++.....|..++ +++.+|+|++||+|... ..|++||..++|. ++.+.|.
T Consensus 92 ~~~~~~g~r~~~~~~iillTDG~~~~~~~~------~~~~~i~i~~igvG~~~~~~~~~~~L~~iA~~~~~~~~~~~~~~ 165 (179)
T 1mjn_A 92 VFREELGARPDATKVLIIITDGEATDSGNI------DAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTF 165 (179)
T ss_dssp TSSGGGTCCTTSEEEEEEEESSCCSSCSCC------GGGTTSEEEEEEESGGGCSHHHHHTTGGGSCSCHHHHEEEESSG
T ss_pred hcccccCCCCCCCeEEEEEcCCCCCCCcch------HHHCCCEEEEEEccccccccccHHHHHHHhCCccHhcEEEeCCH
Confidence 4 321 11345678999886665555432 36789999999999764 6799999999885 4778888
Q ss_pred HHHHHHHHhc
Q 015267 237 SHFKELIMEH 246 (410)
Q Consensus 237 ~hl~~lL~~~ 246 (410)
+.|.+++..+
T Consensus 166 ~~L~~i~~~i 175 (179)
T 1mjn_A 166 EKLKDLCTEL 175 (179)
T ss_dssp GGSCCHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777766543
No 25
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=98.96 E-value=4.3e-09 Score=95.78 Aligned_cols=149 Identities=7% Similarity=-0.004 Sum_probs=110.7
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCC--CHHHHHHHHhhhcCCCC-cchHHHHHHHHHH
Q 015267 89 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGCSG-DSSLQNALDLVQG 165 (410)
Q Consensus 89 ~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltg--n~~~~i~~L~~~~~~~G-~~SLqnaL~~A~~ 165 (410)
+.+.++..+++.+..|+..|-...+..++|||.|. ..+....+++. +..++.++|.++....| .+.++.||..|..
T Consensus 34 m~~~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs-~~~~~~~~l~~~~~~~~~~~~i~~l~~~gg~~T~~~~aL~~a~~ 112 (199)
T 3zqk_A 34 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYS-YMVTVEYPFSEAQSKGDILQRLREIRYQGGNRTNTGLALRYLSD 112 (199)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCBSTTSBEEEEEEES-SSEEEEECTTSCCCHHHHHHHHHHCCCCCCSCCCHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEEEC-CcccEEEecCCcCCHHHHHHHHHhCcCCCCCcChHHHHHHHHHH
Confidence 34567888889999999987556789999999995 77888999986 88888899987643345 4999999999998
Q ss_pred HHhCC---CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcch--hHHHHHHHHHhhCCeeEEeCCHHHHH
Q 015267 166 LLSQI---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLCQDTGGSYSVALDESHFK 240 (410)
Q Consensus 166 ~L~~~---p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~a--E~~iLk~la~~TgG~Y~va~d~~hl~ 240 (410)
.+... .....+++||+++...+.|.. .+ + +.+|+|++||+|. ....|++||. +|.++.+.|.+.|.
T Consensus 113 ~l~~~~~g~r~~~~~~iillTDG~~~d~v--~~----~-~~~v~v~~iGiG~~~~~~~L~~iA~--~~~~~~~~~~~~L~ 183 (199)
T 3zqk_A 113 HSFLVSQGDREQAPNLVYMVTGNPASDEI--KR----L-PGDIQVVPIGVGPNANVQELERIGW--PNAPILIQDFETLP 183 (199)
T ss_dssp CCTCGGGTCCTTSCEEEEEEECSCCSSCC--CC----C-CTTEEEEEEEESTTCCHHHHHHHHT--TSCCEEESCTTTHH
T ss_pred HhhCcccCCCCCCCeEEEEEeCCCCchHH--HH----H-hCCCEEEEEEcCCCCCHHHHHHHhC--CCceEEeCCHHHHH
Confidence 65321 112345788888855443332 11 1 3799999999984 4689999997 44455777888888
Q ss_pred HHHHhcC
Q 015267 241 ELIMEHA 247 (410)
Q Consensus 241 ~lL~~~~ 247 (410)
+++.+++
T Consensus 184 ~~~~~l~ 190 (199)
T 3zqk_A 184 REAPDLV 190 (199)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877654
No 26
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=98.95 E-value=6.1e-09 Score=111.26 Aligned_cols=131 Identities=12% Similarity=0.086 Sum_probs=97.4
Q ss_pred HhcCC--CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCee----------EEeecCCCCHHHHHHHHhhhc---
Q 015267 84 AAEMD--FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA----------NCLTDLGGSPESHIKALMGKL--- 148 (410)
Q Consensus 84 M~~~D--~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~A----------e~ls~ltgn~~~~i~~L~~~~--- 148 (410)
|.+.| ..||||+++++++..||....-.+|.++||||+|. +.+ ..+.+|+.--...++.|.++.
T Consensus 48 M~~~d~~~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfg-t~~t~n~l~~d~i~v~~~L~~~~~~~ik~l~~l~~~~ 126 (609)
T 1jey_A 48 MFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYG-TEKDKNSVNFKNIYVLQELDNPGAKRILELDQFKGQQ 126 (609)
T ss_dssp GGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-CSSCBSTTCCTTEEEEEEEECCCHHHHHHHHTTSHHH
T ss_pred HcCCCCCCCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEc-cCCCCCcCCCCCeEEEecCCCCCHHHHHHHHHHhhcc
Confidence 66666 47999999999999999988878999999999996 545 566777533344555555432
Q ss_pred ---------CCCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCC-CCcc-----cHHHHHHHHHHcCeEEEEEEcc
Q 015267 149 ---------GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALST-CDPG-----DIMETIQKCKESKIRCSVIGLS 213 (410)
Q Consensus 149 ---------~~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t-~Dpg-----dI~~ti~~akk~~IrV~vIgL~ 213 (410)
...++++|.+||.+|..+|++......+++|||++.... .+.. .+..+++.|++.||+|++|+++
T Consensus 127 ~~~~~~~~~g~~~~t~l~daL~~a~~~f~~~~~k~~~k~IiL~TDg~~p~~~~~~~~~~~~~~a~~l~~~gI~i~~igig 206 (609)
T 1jey_A 127 GQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLK 206 (609)
T ss_dssp HHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCSSCEEEEEEEEEESCSCTTTTCHHHHHHHHHHHHHHHHHTEEEEEEEBC
T ss_pred cchhhhhhcCCCCCCCHHHHHHHHHHHHHhhchhhcCCEEEEEcCCCCCCCCchHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence 223568999999999999998643333456666664333 2221 4567899999999999999998
Q ss_pred hh
Q 015267 214 AE 215 (410)
Q Consensus 214 aE 215 (410)
.+
T Consensus 207 ~~ 208 (609)
T 1jey_A 207 KP 208 (609)
T ss_dssp CT
T ss_pred CC
Confidence 65
No 27
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=98.86 E-value=1e-09 Score=124.26 Aligned_cols=151 Identities=15% Similarity=0.127 Sum_probs=119.4
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCC--CHHHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 015267 89 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGCSGDSSLQNALDLVQGL 166 (410)
Q Consensus 89 ~~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltg--n~~~~i~~L~~~~~~~G~~SLqnaL~~A~~~ 166 (410)
+.++++..+++.+..|++.|- .+..|+|||.|. ..+..+.+|+. +..++.++++.+....|.+.++.||..|+..
T Consensus 143 m~~~~f~~~k~fv~~lv~~~~--~~~~rVglV~Fs-~~~~~~~~lt~~~~~~~l~~ai~~i~~~gG~T~~g~AL~~a~~~ 219 (1095)
T 3k6s_A 143 ISSRNFATMMNFVRAVISQFQ--RPSTQFSLMQFS-NKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHR 219 (1095)
T ss_dssp SCSHHHHHHHHHHHHHHHSSC--SSSEEEEEEEES-SSEEEEECSHHHHSCSCGGGGTTTCCCCCSCBCHHHHHHHHHTT
T ss_pred CChhHHHHHHHHHHHHHHhcc--ccccEEEEEEEC-CeEEEEecCcccCCHHHHHHHHhhhhcccCCChHHHHHHHHHHh
Confidence 568899999999999998763 445899999995 77899999974 5555666666554567889999999999987
Q ss_pred HhCCC---CCCCceEEEEEeCCCC-CCcccHHHHHHHHHHcCeEEEEEEcchh------HHHHHHHHHhhCC-eeEEeCC
Q 015267 167 LSQIP---SYGHREVLILYSALST-CDPGDIMETIQKCKESKIRCSVIGLSAE------MFICKHLCQDTGG-SYSVALD 235 (410)
Q Consensus 167 L~~~p---~~~sreILVi~~S~~t-~DpgdI~~ti~~akk~~IrV~vIgL~aE------~~iLk~la~~TgG-~Y~va~d 235 (410)
|.... ....++|||+++.... .|+.++.++++.+++.+|+|++||+|.. ...|++||..++| .|+.+.|
T Consensus 220 lf~~~~g~R~~~~kviIllTDG~~~~d~~~~~~~a~~~r~~GI~i~aIGVG~~~~~~~d~~eL~~IAs~p~g~~vf~v~d 299 (1095)
T 3k6s_A 220 LFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVED 299 (1095)
T ss_dssp TTSTTTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHHTTSCSSTTTSCCCBSC
T ss_pred hccccccCCCCCCeEEEEEeCCCcCCCchhHHHHHHHHHHCCCEEEEEecccccccccCHHHHHHHHcCCCCceEEEcCC
Confidence 75321 1234578888886665 5788899999999999999999999975 5899999999987 6677777
Q ss_pred HHHHHHH
Q 015267 236 ESHFKEL 242 (410)
Q Consensus 236 ~~hl~~l 242 (410)
.+.|+++
T Consensus 300 ~~~L~~i 306 (1095)
T 3k6s_A 300 FDALKDI 306 (1095)
T ss_dssp SGGGGSS
T ss_pred HHHHHHH
Confidence 7665443
No 28
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=98.25 E-value=2.6e-06 Score=81.40 Aligned_cols=66 Identities=12% Similarity=0.202 Sum_probs=51.4
Q ss_pred CCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh-------HHHHHHHHHhhCCeeEEeCCHHHHH
Q 015267 174 GHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE-------MFICKHLCQDTGGSYSVALDESHFK 240 (410)
Q Consensus 174 ~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE-------~~iLk~la~~TgG~Y~va~d~~hl~ 240 (410)
+..++|||++...++-.++..++++.|++.||+|++||++.. ...|++||+.|||.||.+ +...|.
T Consensus 8 ~~~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~~tGG~yf~a-~~~~l~ 80 (242)
T 3rag_A 8 ATIRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIADAGGGMCRIV-QPADIS 80 (242)
T ss_dssp CCEEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHHHTTSCEEEE-CGGGHH
T ss_pred CCccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHHhcCCeEEEe-eHHHHH
Confidence 456788888855433224677889999999999999999542 478999999999999998 445444
No 29
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=98.10 E-value=6.8e-06 Score=86.24 Aligned_cols=132 Identities=8% Similarity=-0.031 Sum_probs=86.3
Q ss_pred HhcCCCCCCHHHHHHHH--HHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhc-CCCCcchHHHHH
Q 015267 84 AAEMDFRPSRMAVVAKQ--VEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL-GCSGDSSLQNAL 160 (410)
Q Consensus 84 M~~~D~~P~Rl~~~~~~--l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~-~~~G~~SLqnaL 160 (410)
|...|.. +|+.+ ++. +..|+. ..+.+++|||+|.+ +....|++.+.. +.+.|..+. .+.|.|+|+.||
T Consensus 381 M~~~~~~-~~l~~-~~~Aa~l~~~~----~~~~d~vglv~Fs~--~~~~~~~t~~~~-l~~~l~~l~~~~~GgT~i~~aL 451 (538)
T 1yvr_A 381 MNQRVLG-SILNA-SVVAAAMCMLV----ARTEKDSHMVAFSD--EMLPCPITVNML-LHEVVEKMSDITMGSTDCALPM 451 (538)
T ss_dssp GGSBSTT-SSCBH-HHHHHHHHHHH----HHHCSSEEEEEESS--SEECCSCCTTSC-HHHHHHHHTTCCCSCCCTTHHH
T ss_pred cCCCCCC-CcHHH-HHHHHHHHHHH----hccCCceEEEEECC--CceEcCCCCccc-HHHHHHHHhcCCCCCCcHHHHH
Confidence 7777765 56665 443 445554 35788999999975 445667776544 444444432 257889999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEEeCCCCCC-cccHHHHHHHHHHc-C--eEEEEEEcchh-------------------HH
Q 015267 161 DLVQGLLSQIPSYGHREVLILYSALSTCD-PGDIMETIQKCKES-K--IRCSVIGLSAE-------------------MF 217 (410)
Q Consensus 161 ~~A~~~L~~~p~~~sreILVi~~S~~t~D-pgdI~~ti~~akk~-~--IrV~vIgL~aE-------------------~~ 217 (410)
..|... ...+.+|||++.....+ ..+..+.++.+++. | |++++||+|.. ..
T Consensus 452 ~~a~~~------~~~~~~iIliTDg~~~~g~~~~~~~l~~~~~~~~~~v~l~~igig~~~~~~~~~~~~~~~~i~g~~e~ 525 (538)
T 1yvr_A 452 LWAQKT------NTAADIFIVFTDCETNVEDVHPATALKQYREKMGIPAKLIVCAMTSNGFSIADPDDRGMLDICGFDSG 525 (538)
T ss_dssp HHHHHT------TCCCSEEEEEECCCCCSSSCCHHHHHHHHHHHHTCCCEEEEEECSSSSEESSCTTCTTEEEEETTCTT
T ss_pred HHHHhc------cCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHhCCCcEEEEEEecCCCCcccCCCCCCceeeccCCHH
Confidence 999875 12345777777443332 23566777555543 5 55599999863 26
Q ss_pred HHHHHHHhhCCee
Q 015267 218 ICKHLCQDTGGSY 230 (410)
Q Consensus 218 iLk~la~~TgG~Y 230 (410)
+|+.|++.|||.|
T Consensus 526 ~l~~Ia~~~~G~~ 538 (538)
T 1yvr_A 526 ALDVIRNFTLDLI 538 (538)
T ss_dssp HHHHHHHHHTTC-
T ss_pred HHHHHHHHhCCCC
Confidence 8999999999976
No 30
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=97.82 E-value=0.00051 Score=75.33 Aligned_cols=98 Identities=18% Similarity=0.205 Sum_probs=74.2
Q ss_pred CCcchHHHHHHHHHHHHhCC-CCCCCceEEEEEeCCCCCCcccH------------------------------HHHHHH
Q 015267 151 SGDSSLQNALDLVQGLLSQI-PSYGHREVLILYSALSTCDPGDI------------------------------METIQK 199 (410)
Q Consensus 151 ~G~~SLqnaL~~A~~~L~~~-p~~~sreILVi~~S~~t~DpgdI------------------------------~~ti~~ 199 (410)
.+.++++.||..|...|+.. +..+ -+|+++.+++-|.-||.| .+.+..
T Consensus 263 ~~~~a~G~Al~~A~~lL~~~~~~~G-GrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~ke~~~~~~~a~~fY~~la~~ 341 (769)
T 2nut_A 263 RPLRSSGVALSIAVGLLECTFPNTG-ARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANR 341 (769)
T ss_dssp CCCCCHHHHHHHHHHHHHHHSCSSC-CEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHhhcccCCC-cEEEEEeCCCCCCCCCCCcCcccccccccccccccchhhhccchHHHHHHHHHH
Confidence 45689999999999999953 2233 469999987766555531 246888
Q ss_pred HHHcCeEEEEEEcchh---HHHHHHHHHhhCCeeEEeCC--HHHHHHHHHhcCCC
Q 015267 200 CKESKIRCSVIGLSAE---MFICKHLCQDTGGSYSVALD--ESHFKELIMEHAPP 249 (410)
Q Consensus 200 akk~~IrV~vIgL~aE---~~iLk~la~~TgG~Y~va~d--~~hl~~lL~~~~~P 249 (410)
+.+++|.||+..++.+ +..++.+++.|||..+...+ ...|++-|...+.-
T Consensus 342 ~~~~gi~VDlF~~~~~~vdla~l~~l~~~TGG~~~~~~~F~~~~~~~~l~~~~~~ 396 (769)
T 2nut_A 342 AATTGHVIDIYACALDQTGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTK 396 (769)
T ss_dssp HHHHTCEEEEEEECSSCCCHHHHTHHHHHSSCCEEEESCSSSHHHHHHHHHTTCB
T ss_pred HHHCCeEEEEEeccCCccChHHHHHHhhcCCceEEEcCCCchhhHHHHHHHHHhh
Confidence 9999999999999875 78999999999998776654 34576666666643
No 31
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=97.67 E-value=0.0003 Score=73.92 Aligned_cols=127 Identities=8% Similarity=0.000 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhc-CCCCcchHHHHHHHHHHHHh
Q 015267 90 RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL-GCSGDSSLQNALDLVQGLLS 168 (410)
Q Consensus 90 ~P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~-~~~G~~SLqnaL~~A~~~L~ 168 (410)
++++++++...+ |+. ..+.+++|||+|.+. ....+++.+ ..+.+.|+.+. ...|+|+++.+|..|....
T Consensus 385 k~~~~e~Aa~la--~~~----~r~~d~v~lv~Fs~~--~~~~~~~~~-~~l~~~l~~l~~~~~ggTdi~~~l~~a~~~~- 454 (535)
T 2nvo_A 385 GLTPNMAAAAMS--LIA----LRTEPDALTMGFAEQ--FRPLGITPR-DTLESAMQKAQSVSFGGTDCAQPILWAAQER- 454 (535)
T ss_dssp TCCHHHHHHHHH--HHH----HHHSSEEEEEEEBSS--EEECCCCTT-CCHHHHHHHTCCSSBCCCCTTHHHHHHHHTT-
T ss_pred cccHHHHHHHHH--HHH----cCcCCceEEEEECCc--ceEcCCCcc-hhHHHHHHHHhhCCCCCccHHHHHHHHHHhc-
Confidence 367777665443 443 234569999999753 333466554 33445555432 2368899999988775432
Q ss_pred CCCCCCCceEEEEEeCCCC-CCcccHHHHHHHHHHc---CeEEEEEEcchh-------------------HHHHHHHHHh
Q 015267 169 QIPSYGHREVLILYSALST-CDPGDIMETIQKCKES---KIRCSVIGLSAE-------------------MFICKHLCQD 225 (410)
Q Consensus 169 ~~p~~~sreILVi~~S~~t-~DpgdI~~ti~~akk~---~IrV~vIgL~aE-------------------~~iLk~la~~ 225 (410)
....+|||++...+ ....+.+++++.+++. +++|.+|+++.. ..+|+.|++.
T Consensus 455 -----~~~~~vIliTD~~~~~g~~~~~~al~~~r~~~~~~~klv~i~l~~~~~~~~~~~~~~~~~i~g~se~~l~~Ia~~ 529 (535)
T 2nvo_A 455 -----LDVDTFVVYTDNETWAGQVHPTVALDQYAQKMGRAPKLIVVGLTATEFSIADPQRRDMLDVVGFDAAAPNVMTAF 529 (535)
T ss_dssp -----CCCSEEEEEESSCCCCCSSCHHHHHHHHHHHHSCCCEEEEEETTCSCCCCSCTTCSSEEEEEECCTTHHHHHHHH
T ss_pred -----CCCCEEEEEeCCCccCCCCCHHHHHHHHHHhhCCCCeEEEEeccCCCcccCCCCCCCceeeeCCCHHHHHHHHHH
Confidence 22357777774433 2233567888888876 899999999963 2789999999
Q ss_pred hCCeeE
Q 015267 226 TGGSYS 231 (410)
Q Consensus 226 TgG~Y~ 231 (410)
|||.|+
T Consensus 530 ~~G~~~ 535 (535)
T 2nvo_A 530 ARGEVL 535 (535)
T ss_dssp HTTCC-
T ss_pred hCCCcC
Confidence 999985
No 32
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=97.41 E-value=0.0031 Score=69.55 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCccc-------------------------HH-HHHHHHHHc
Q 015267 150 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGD-------------------------IM-ETIQKCKES 203 (410)
Q Consensus 150 ~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~Dpgd-------------------------I~-~ti~~akk~ 203 (410)
..++.+++.||+.|..+|+.. + .+|+++.+++-|.-||. ++ +.+..+.++
T Consensus 302 ~~~~~a~G~AL~~A~~lL~~~---G-GrI~~F~sg~pt~GpG~l~~r~~~~~~~~~ke~~~l~~~a~~fY~~la~~~~~~ 377 (810)
T 1pcx_A 302 LITNFALGPALKSAYHLIGGV---G-GKIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKV 377 (810)
T ss_dssp CCCCCCHHHHHHHHHHHHTTT---C-EEEEEEESSCCCSSTTCCCC--------------------CCHHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHHHHHhc---C-CEEEEEecCCCCCCCCcccccccccccCcccchhhhcccchHHHHHHHHHHHHC
Confidence 457789999999999999963 3 47999998776655542 12 447788999
Q ss_pred CeEEEEEEcchh---HHHHHHHHHhhCCeeEEe
Q 015267 204 KIRCSVIGLSAE---MFICKHLCQDTGGSYSVA 233 (410)
Q Consensus 204 ~IrV~vIgL~aE---~~iLk~la~~TgG~Y~va 233 (410)
+|-||+..++.+ +..++.+++.|||.-+.-
T Consensus 378 gi~VDlF~~s~~~~dla~l~~l~~~TGG~v~~y 410 (810)
T 1pcx_A 378 QITVDLFLASEDYMDVASLSNLSRFTAGQTHFY 410 (810)
T ss_dssp TEEEEEEEEESSCCCHHHHHHHHHTTTCCEEEE
T ss_pred CeEEEEEEccCCccChHHHHHHHhcCCcEEEEc
Confidence 999999999875 789999999999965544
No 33
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=97.28 E-value=0.0059 Score=66.89 Aligned_cols=98 Identities=18% Similarity=0.195 Sum_probs=72.3
Q ss_pred CCcchHHHHHHHHHHHHhCC-CCCCCceEEEEEeCCCCCCcccH------------------------------HHHHHH
Q 015267 151 SGDSSLQNALDLVQGLLSQI-PSYGHREVLILYSALSTCDPGDI------------------------------METIQK 199 (410)
Q Consensus 151 ~G~~SLqnaL~~A~~~L~~~-p~~~sreILVi~~S~~t~DpgdI------------------------------~~ti~~ 199 (410)
.+..+++.||+.|...|+.. +..+ -+|+++.+++-|.-||.| .+.+..
T Consensus 257 ~~~~~~G~Al~~A~~ll~~~~~~~G-GrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~~~~a~~fY~~la~~ 335 (768)
T 1m2o_A 257 RPLRATGSALNIASLLLQGCYKNIP-ARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQR 335 (768)
T ss_dssp CCCCCHHHHHHHHHHHHHHHCTTSC-CEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHHTCCTTHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHhhccCCCC-cEEEEEeCCCCCCCCccccccccccccccccccccchhhhcCchHHHHHHHHHH
Confidence 34569999999999999853 2233 469999987766555421 134667
Q ss_pred HHHcCeEEEEEEcchh---HHHHHHHHHhhCCeeEEeCC--HHHHHHHHHhcCCC
Q 015267 200 CKESKIRCSVIGLSAE---MFICKHLCQDTGGSYSVALD--ESHFKELIMEHAPP 249 (410)
Q Consensus 200 akk~~IrV~vIgL~aE---~~iLk~la~~TgG~Y~va~d--~~hl~~lL~~~~~P 249 (410)
+.+++|-||+..++.+ +..++.+++.|||.-+...+ ...|++-|...+.-
T Consensus 336 ~~~~gi~VDlF~~~~~~~dla~l~~l~~~TGG~v~~y~~f~~~~~~~~l~r~l~~ 390 (768)
T 1m2o_A 336 VAANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAK 390 (768)
T ss_dssp HHHHTCEEEEEEECSSCCSHHHHHHHHHHHTCCEEEESCTTSHHHHHHHHHTTCB
T ss_pred HHHCCeEEEEEEccCCccChHHHhhHhhcCCceEEEcCCCchHHHHHHHHHHHhh
Confidence 8889999999999865 78999999999996554433 35677777766654
No 34
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=97.17 E-value=0.0045 Score=69.15 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=63.8
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCcccH-------------------------H-HHHHHHHHc
Q 015267 150 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDI-------------------------M-ETIQKCKES 203 (410)
Q Consensus 150 ~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~DpgdI-------------------------~-~ti~~akk~ 203 (410)
...+.+++.||+.|..+|+.. + -+|+++.+++-|.-||.| + +.+..+.++
T Consensus 418 ~~~~~~~G~AL~aA~~lL~~~---G-GrI~~F~sg~Pt~GpG~l~~re~~~~~~~~ke~~~ll~~a~~FYk~LA~~~~~~ 493 (926)
T 1m2v_B 418 LITNFALGPALKSAYHLIGGV---G-GKIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKV 493 (926)
T ss_dssp CCCCCCHHHHHHHHHHHHTTT---C-EEEEEEESSCCCSSTTCCCCCCC----CCTTHHHHHTSCSSTHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHhh---C-CEEEEEecCCCCCCCCcccccccccccCcccchhhhccchHHHHHHHHHHHHHc
Confidence 456789999999999999964 3 479999987766555422 2 457888999
Q ss_pred CeEEEEEEcchh---HHHHHHHHHhhCCeeEEe
Q 015267 204 KIRCSVIGLSAE---MFICKHLCQDTGGSYSVA 233 (410)
Q Consensus 204 ~IrV~vIgL~aE---~~iLk~la~~TgG~Y~va 233 (410)
+|-||+..++.+ +..++.+++.|||.-+.-
T Consensus 494 gisVDlF~~s~~~vdla~l~~l~~~TGG~v~~y 526 (926)
T 1m2v_B 494 QITVDLFLASEDYMDVASLSNLSRFTAGQTHFY 526 (926)
T ss_dssp TEEEEEEEEESSCCCHHHHHHHHHTTTCCEEEE
T ss_pred CeEEEEEEccCCCcChHHHHHHHhcCCceEEEc
Confidence 999999999875 789999999999965544
No 35
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=97.09 E-value=0.0011 Score=73.73 Aligned_cols=99 Identities=12% Similarity=0.139 Sum_probs=67.9
Q ss_pred HhcCCCC-CCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEE---------------------------------
Q 015267 84 AAEMDFR-PSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANC--------------------------------- 129 (410)
Q Consensus 84 M~~~D~~-P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~--------------------------------- 129 (410)
|...++. ++||..+++++..|+. ++..+|.+++|||+|.+. +..
T Consensus 237 M~~~~~~~~~Rl~~~K~a~~~~ld-~L~~~~~drVgLV~Fs~~-a~~~~~~~v~~~~~~~~g~~~n~~~~w~~~~t~~t~ 314 (893)
T 2ww8_A 237 MSNIRNKNARRAERAGEATRSLID-KITSDSENRVALVTYAST-IFDGTEFTVEKGVADKNGKRLNDSLFWNYDQTSFTT 314 (893)
T ss_dssp GCTTHHHHCCHHHHHHHHHHHHHH-HHHTSTTCEEEEEEESSS-BCBSCEEEEECCEECTTCCEECCCTTSCTTCCEEEE
T ss_pred CCCcCccchhHHHHHHHHHHHHHH-HhhcCCCcEEEEEEecCc-cccccccccccccccccccccccccccccccccccc
Confidence 6654332 3499999999999994 556689999999999742 211
Q ss_pred ------eecCCCCHHHHH---HHHhhh---------cCCCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeC
Q 015267 130 ------LTDLGGSPESHI---KALMGK---------LGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSA 184 (410)
Q Consensus 130 ------ls~ltgn~~~~i---~~L~~~---------~~~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S 184 (410)
..|||.|...+. ..|... +.+.|.+.++.||.+|+..|........+++|||++.
T Consensus 315 ~~~~~~~lpLT~d~~~i~~lk~~I~~~~~~~~G~~~l~~~GGT~i~~AL~~A~~lL~~~~~~~~~kvIILLTD 387 (893)
T 2ww8_A 315 NTKDYSYLKLTNDKNDIVELKNKVPTEAEDHDGNRLMYQFGATFTQKALMKADEILTQQARQNSQKVIFHITD 387 (893)
T ss_dssp ECCBCCEEEEECCHHHHHHHHHHSCSCCCCSCTTSGGGGGCSCCHHHHHHHHHHHHHHHSCSSSEEEEEEEES
T ss_pred cccccccccccCCHHHHHHHHHHHhhhccccccccccccCCCChHHHHHHHHHHHHHhhcccCCCeEEEEEcC
Confidence 236677875553 444321 1236789999999999999974212345678888873
No 36
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=96.90 E-value=0.018 Score=62.99 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=63.3
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCccc------------------------HH-HHHHHHHHcCe
Q 015267 151 SGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGD------------------------IM-ETIQKCKESKI 205 (410)
Q Consensus 151 ~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~Dpgd------------------------I~-~ti~~akk~~I 205 (410)
..+.+++.||+.|...|+.. + -+|+++.+++-|..||. .+ +.+..+.+++|
T Consensus 268 ~~~~~~G~AL~aA~~ll~~~---G-GrI~~F~sg~pt~GpG~l~~r~~~~~~~~~ke~~~~~~a~~fY~~la~~~~~~~i 343 (751)
T 3eh1_A 268 ETHSALGPALQAAFKLMSPT---G-GRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQT 343 (751)
T ss_dssp CCCCCHHHHHHHHHHHHTTT---C-EEEEEEECSCCCSSTTCCCCCCCSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTE
T ss_pred CCccchHHHHHHHHHHhhcC---C-CEEEEEecCCCCCCCCccccccccccCCCchhhhhhcchHHHHHHHHHHHHhcCc
Confidence 34579999999999999863 3 47999988776655552 23 56888999999
Q ss_pred EEEEEEcchh---HHHHHHHHHhhCCeeEEe
Q 015267 206 RCSVIGLSAE---MFICKHLCQDTGGSYSVA 233 (410)
Q Consensus 206 rV~vIgL~aE---~~iLk~la~~TgG~Y~va 233 (410)
-||+..++.+ +..++.+++.|||.-+.-
T Consensus 344 ~VDlF~~s~~~~dlatl~~l~~~TGG~v~~y 374 (751)
T 3eh1_A 344 AVDLFLLSSQYSDLASLACMSKYSAGCIYYY 374 (751)
T ss_dssp EEEEEECCSSCCCHHHHTHHHHTTTCCEEEC
T ss_pred eEEEEEccCcccChHhHHHHHhhcCceEEEe
Confidence 9999999875 789999999999966554
No 37
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=96.60 E-value=0.071 Score=49.72 Aligned_cols=147 Identities=16% Similarity=0.113 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhcCCCC--c-c-hHHHHHHHHHH---H
Q 015267 94 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSG--D-S-SLQNALDLVQG---L 166 (410)
Q Consensus 94 l~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~~~~G--~-~-SLqnaL~~A~~---~ 166 (410)
++.+++.+..++++.-..+...|+|+++|+|+......++|.|..+..+.+.+.. .+| + | +--.||..|+. .
T Consensus 20 i~~lk~~~~~l~~~l~~~~~~~r~Gfg~f~Dk~~~~~l~lT~d~~~F~~~v~~~~-vsg~~D~PE~g~dal~qa~~c~~~ 98 (212)
T 2iue_A 20 LSNVQTLGSDLLKALNEISRSGRIGFGSIVNMTFQHILKLTADSSQFQRELRKQL-VSGKLATPKGQLDAVVQVAICLGE 98 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCEEEEEEEESSSCEEEEEEEESCHHHHHHHHHTCC-CCCCSSSSBCHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcCceEEEEEEEcCcceecCCcCCCHHHHHHHHhhcc-ccCCCCCCchHHHHHHHHHHhhhh
Confidence 5555555555555544445679999999999877788999999999999998752 111 1 1 33335555543 2
Q ss_pred HhCCCCCCCceEEEEEeCCCC-------------------------------CCcccHHHHHHHHHHcCeEEEEEEcchh
Q 015267 167 LSQIPSYGHREVLILYSALST-------------------------------CDPGDIMETIQKCKESKIRCSVIGLSAE 215 (410)
Q Consensus 167 L~~~p~~~sreILVi~~S~~t-------------------------------~DpgdI~~ti~~akk~~IrV~vIgL~aE 215 (410)
+.=. + .+++||+++.-.. -|+..+.+..+.|+++||.+....=+..
T Consensus 99 i~Wr-~--a~rllvl~TDa~~H~~gDg~l~gi~~pnd~~chl~~g~y~~s~~~Dyps~~q~~~~l~~~~i~~ifavt~~~ 175 (212)
T 2iue_A 99 IGWR-N--GTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRCHLDDGMYRSRGEPDYQSVVQLASKLAENNIQPIFVVPSRM 175 (212)
T ss_dssp HTCC-S--SEEEEEEECSSCBCCTTGGGGGTCCSCCCSSCCBSSSBBGGGGSSCCCCHHHHHHHHHHHTCEEEEEEEHHH
T ss_pred cccC-C--ccEEEEEECcCCccccCCccccccccCCccccccCCCeeccCcccCCCCHHHHHHHHHhcCCcEEEEEccch
Confidence 3332 2 6788888872211 1445777899999999998876666666
Q ss_pred HHHHHHHHHhhCCeeEEeC--CHHHHHHHHH
Q 015267 216 MFICKHLCQDTGGSYSVAL--DESHFKELIM 244 (410)
Q Consensus 216 ~~iLk~la~~TgG~Y~va~--d~~hl~~lL~ 244 (410)
....+++++..+|.....+ |...+.+|..
T Consensus 176 ~~~Y~~l~~~i~~s~v~~L~~dSsni~~li~ 206 (212)
T 2iue_A 176 VKTYEKLTTFIPKLTIGELSDDSSNVAQLIR 206 (212)
T ss_dssp HHHHHHHHHHSTTCEEEEESSCCHHHHHHHH
T ss_pred hHHHHHHHHHcccceeeeecCCcHHHHHHHH
Confidence 7789999998888776444 3455555543
No 38
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=96.10 E-value=0.009 Score=56.96 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCe--eEEe-ecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHHh
Q 015267 92 SRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV--ANCL-TDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLS 168 (410)
Q Consensus 92 ~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~--Ae~l-s~ltgn~~~~i~~L~~~~~~~G~~SLqnaL~~A~~~L~ 168 (410)
.||..++.++..++..+-.....+++|||+|.+.. ++.+ .|+|.+. .+...|..+ ...|.|.++.||..|+.++.
T Consensus 149 ~kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~~~~~ll~pfT~~~-~~~~~l~~L-~agG~Tplg~AL~~A~~~~~ 226 (242)
T 3rag_A 149 DKIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGEEATRLVQPFSSEV-NVAALEAEL-VARGGTPTGPAIDHAADLLL 226 (242)
T ss_dssp TTHHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTTCSCEEEEEEESSC-CHHHHHHHC-CCCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCccceeecCCCCChH-HHHHHHhhC-CCCCCCcHHHHHHHHHHHHH
Confidence 38999999999999887555679999999998653 5555 4999887 544555554 56889999999999999985
No 39
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=96.00 E-value=0.064 Score=58.78 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeC-CCCCCcc------------------------cHH-HHHHHHHHc
Q 015267 150 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSA-LSTCDPG------------------------DIM-ETIQKCKES 203 (410)
Q Consensus 150 ~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S-~~t~Dpg------------------------dI~-~ti~~akk~ 203 (410)
...++.++.||+.|+..|+... . .-+|+++.++ +.+..|| +.+ +.+..+.++
T Consensus 285 ~~~~t~~g~al~aa~~~l~~~~-~-GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~sdke~~~~~~a~~fY~~la~~~~~~ 362 (766)
T 3eh2_A 285 RETETVFVPVIQAGMEALKAAE-C-AGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQ 362 (766)
T ss_dssp CCCCCCSHHHHHHHHHHHHHTT-C-CEEEEEEECSCCCSSSTTCCCCCCCGGGTTSTTGGGGTSCSSTHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHhccCC-C-CcEEEEEecCCCCcCCCcccccccccccCCCcchhhhccchHHHHHHHHHHHHhC
Confidence 4456889999999999998642 2 3569999887 4433333 233 568899999
Q ss_pred CeEEEEEEcchh---HHHHHHHHHhhCCeeEEeCC------HHHHHHHHHhcC
Q 015267 204 KIRCSVIGLSAE---MFICKHLCQDTGGSYSVALD------ESHFKELIMEHA 247 (410)
Q Consensus 204 ~IrV~vIgL~aE---~~iLk~la~~TgG~Y~va~d------~~hl~~lL~~~~ 247 (410)
+|-||+..++.+ +..++.+++.|||.-+.-.+ ...|..-|...+
T Consensus 363 ~i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y~~F~~~~d~~~f~~dl~~~l 415 (766)
T 3eh2_A 363 GCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQERFLSDLRRDV 415 (766)
T ss_dssp TEEEEEEECCSSCCCHHHHTHHHHHTTCCEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEecCCCcChHHHHHHHhhcCceEEEeCCCcchhHHHHHHHHHHHHh
Confidence 999999999875 79999999999997665433 333555555444
No 40
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=95.85 E-value=0.13 Score=56.28 Aligned_cols=95 Identities=12% Similarity=0.168 Sum_probs=68.3
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeC-CCCCCcc------------------------cHH-HHHHHHHHcC
Q 015267 151 SGDSSLQNALDLVQGLLSQIPSYGHREVLILYSA-LSTCDPG------------------------DIM-ETIQKCKESK 204 (410)
Q Consensus 151 ~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S-~~t~Dpg------------------------dI~-~ti~~akk~~ 204 (410)
..++.++.||+.|+..|+... . .-+|+++.++ +.+.-|| +.+ +.+..+.+++
T Consensus 290 ~~~t~~g~al~aa~~~l~~~~-~-GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~t~ke~~~~~~a~~fY~~lA~~~~~~~ 367 (770)
T 3efo_B 290 ENETVFAPVIQAGMEALKAAD-C-PGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHG 367 (770)
T ss_dssp CCCCCCHHHHHHHHHHHHHHT-C-CEEEEEEECSCCCSSSTTCCCCCCCCCCSSCSCGGGGGSCSSSHHHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHHHhccCC-C-CcEEEEEecCCCCcCCCccccccccccccCCcchhhhhcchHHHHHHHHHHHHHcC
Confidence 456889999999999998532 2 3479999887 4433444 233 5688899999
Q ss_pred eEEEEEEcchh---HHHHHHHHHhhCCeeEEeCC------HHHHHHHHHhcC
Q 015267 205 IRCSVIGLSAE---MFICKHLCQDTGGSYSVALD------ESHFKELIMEHA 247 (410)
Q Consensus 205 IrV~vIgL~aE---~~iLk~la~~TgG~Y~va~d------~~hl~~lL~~~~ 247 (410)
|-||+..++.+ +..++.+++.|||.-+.-.+ ...|..-|...+
T Consensus 368 i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y~~F~~~~~~~~f~~dl~~~l 419 (770)
T 3efo_B 368 CSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDI 419 (770)
T ss_dssp EEEEEEECCSSCCCHHHHTHHHHHTTCCEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCccChHHHHHHHhhcCceEEEecCCcchhHHHHHHHHHHHhh
Confidence 99999999875 78999999999997665443 344544444443
No 41
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=95.44 E-value=0.13 Score=55.84 Aligned_cols=141 Identities=9% Similarity=0.016 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCee-----------------------------EEeecCCCCHHHHHHH
Q 015267 93 RMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA-----------------------------NCLTDLGGSPESHIKA 143 (410)
Q Consensus 93 Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~A-----------------------------e~ls~ltgn~~~~i~~ 143 (410)
-|+.+++....++++.-..-..-|||+++|+|+.. ..+.+||.|..+..+.
T Consensus 127 di~~lk~l~~~l~~~l~~~t~~~r~Gfgsf~Dk~~~P~~~~~p~~~~~~pc~~~~~~c~~~f~f~~~l~lt~~~~~f~~~ 206 (690)
T 3fcs_B 127 DLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEE 206 (690)
T ss_dssp HHHHTTTTTHHHHHHHHHHCSCEEEEEEEECCCSSTTTSCCCSTTTTTCTTSSSSSCCCCCCSEEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCcCceEEeEEeeccccCCccccChhhhccCCCcCCCCCCCCCccceeecccCCCHHHHHHH
Confidence 44455555555555544445678999999998431 1236889999999999
Q ss_pred HhhhcCCCCc----chHHHHHHHHH---HHHhCCCCCCCceEEEEEeCCCC-----------------------------
Q 015267 144 LMGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALST----------------------------- 187 (410)
Q Consensus 144 L~~~~~~~G~----~SLqnaL~~A~---~~L~~~p~~~sreILVi~~S~~t----------------------------- 187 (410)
+.+.. ..|+ -+--.||..|+ ..+.=. ...++||||++....
T Consensus 207 v~~~~-isgn~D~PE~g~dAl~qa~~c~~~igWr--~~a~rllv~~TDa~~H~agDg~l~gi~~pnd~~chl~~~~~y~~ 283 (690)
T 3fcs_B 207 VKKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWR--NDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSA 283 (690)
T ss_dssp HTTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCC--SSSEEEEEEEESSCBCCTTGGGGGTCCSCCCCCCCBCTTCBBGG
T ss_pred hhcee-ccCCCCCCchHHHHHHHHhhcccccCCC--CCceEEEEEECCCccccCCCccccceecCCCcceeecCCCcccc
Confidence 98753 2221 12234554444 333322 346789998873221
Q ss_pred ---CCcccHHHHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhCCeeEEeCCH
Q 015267 188 ---CDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDE 236 (410)
Q Consensus 188 ---~DpgdI~~ti~~akk~~IrV~vIgL~aE~~iLk~la~~TgG~Y~va~d~ 236 (410)
-|+..|.+..++|++++|.+-+..-...+.+.+++++...|.+...+..
T Consensus 284 s~~~DypSi~ql~~~l~~~~i~~ifavt~~~~~~y~~l~~~i~~s~v~~l~~ 335 (690)
T 3fcs_B 284 STTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSM 335 (690)
T ss_dssp GGTSCCCCHHHHHHHHHHTTCEEEEEEEGGGHHHHHHHHHHSTTCEEEEECT
T ss_pred ccccCCCCHHHHHHHHHHcCCeEEEEEeCCchhhHHHHHhhcCCceeeeecc
Confidence 2445688999999999998877777777889999998887776655444
No 42
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=93.32 E-value=0.073 Score=57.66 Aligned_cols=141 Identities=16% Similarity=0.093 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCee----------------------------EEeecCCCCHHHHHHHH
Q 015267 93 RMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA----------------------------NCLTDLGGSPESHIKAL 144 (410)
Q Consensus 93 Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~A----------------------------e~ls~ltgn~~~~i~~L 144 (410)
-|+.+++....++++.-..-..-|||+++|+|+.. ..+.+||.|..+..+.+
T Consensus 120 di~~lk~l~~~l~~~l~~~t~~~r~GfgsFvDk~~~P~~~~~p~~~~~Pc~~~~~~c~~~f~f~~~l~lt~~~~~F~~~v 199 (687)
T 3k6s_B 120 DLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEV 199 (687)
T ss_dssp HHHTTTTCCTTHHHHHHSSCCSCEEEEEEECCCSSTTSSCCSSTTTTCCCCSCCCCCCCCCSCEEEEEEESCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCcCcEEeeEEeeccccCCccccCchhccCCCCCCCCCcCCcccceeecccCCCHHHHHHHH
Confidence 44455555555555554556789999999998432 12467899999999999
Q ss_pred hhhcCCCCc----chHHHHHHHHH---HHHhCCCCCCCceEEEEEeCCCC------------------------------
Q 015267 145 MGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALST------------------------------ 187 (410)
Q Consensus 145 ~~~~~~~G~----~SLqnaL~~A~---~~L~~~p~~~sreILVi~~S~~t------------------------------ 187 (410)
.... .+|+ -+--.||..|+ ..+.=. . .++||||++....
T Consensus 200 ~~~~-isgn~D~PE~g~dAl~qa~vc~~~igWr-~--a~rllV~~TDa~~H~agDg~l~gi~~pndg~Chl~~~~y~~s~ 275 (687)
T 3k6s_B 200 GKQL-ISGNLDAPEGGLDAMMQVAACPEEIGWR-N--VTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSN 275 (687)
T ss_dssp HTSC-CCCCSSSSCCHHHHHHHHTTCHHHHCCC-S--SCCEEEEECSSCCCCTTGGGGGTCCCCCCSCCCCSSSBCSSGG
T ss_pred hhcc-ccCCCCCCchHHHHHHHHhhcccccCCc-c--ceEEEEEECCCccccCCCccccceecCCCCccccCCCcccccc
Confidence 8653 1221 12223444443 233322 2 6678888872221
Q ss_pred -CCcccHHHHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhCCeeEEeCCHH
Q 015267 188 -CDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDES 237 (410)
Q Consensus 188 -~DpgdI~~ti~~akk~~IrV~vIgL~aE~~iLk~la~~TgG~Y~va~d~~ 237 (410)
-|+..|-+..++|++++|.+-+..-...+.+.+++++.-+|.+...+..+
T Consensus 276 ~~DyPS~~ql~~~l~~~~I~~ifavt~~~~~~y~~l~~~i~~s~v~~L~~d 326 (687)
T 3k6s_B 276 EFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSED 326 (687)
T ss_dssp GSCCCCGGGHHHHHHHTTCBCCEEECGGGHHHHHHHHHHSSSCCEEECCTT
T ss_pred ccCCCCHHHHHHHHHHcCCeEEEEEeccchhhHHHHHhhcCCceeeeeccc
Confidence 34555778999999999988887777778899999988887777666554
No 43
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.74 E-value=0.11 Score=41.63 Aligned_cols=87 Identities=24% Similarity=0.494 Sum_probs=58.1
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 352 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~ 352 (410)
.|.|+.|...|- +-|-.|+.|+..+.+...|.+-. ||.-. ......|.
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~----------------~~~~~~C~ 70 (124)
T 2dlq_A 7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR----------------SEQVFTCS 70 (124)
T ss_dssp SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCS----------------CCCCEECS
T ss_pred CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCC----------------CCCCeECC
Confidence 789999987654 34678999999998888887642 22110 01234688
Q ss_pred cccccccCCCC--------CCCceeeCCCCCcccccccchhhhcc-CC
Q 015267 353 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHES-LH 391 (410)
Q Consensus 353 ~C~~~~~~~~~--------~~~~~~~C~~C~~~FC~dCD~fiHe~-Lh 391 (410)
-|.+.|..... .....|.|+.|+..|=..=++-.|.. .|
T Consensus 71 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H 118 (124)
T 2dlq_A 71 VCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118 (124)
T ss_dssp SSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred CCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence 88888864320 12235899999998887777777753 44
No 44
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=91.69 E-value=0.031 Score=49.12 Aligned_cols=90 Identities=28% Similarity=0.602 Sum_probs=51.6
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 352 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~ 352 (410)
.|.|+.|+..|- +-|-.|+.|+..+.+...|.+-. |+- - ....|.
T Consensus 49 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~ 109 (190)
T 2i13_A 49 PYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG--E-----------------KPYACP 109 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT--C-----------------CCEECT
T ss_pred CccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCC--C-----------------CCCcCC
Confidence 577777776553 23557777777777776665532 211 0 123477
Q ss_pred cccccccCCCC--------CCCceeeCCCCCcccccccchhhhccCC------CCCCCC
Q 015267 353 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESLH------NCPGCE 397 (410)
Q Consensus 353 ~C~~~~~~~~~--------~~~~~~~C~~C~~~FC~dCD~fiHe~Lh------~CPgC~ 397 (410)
.|.+.|..... .....|.|+.|+..|=..=++..|...| .|+.|.
T Consensus 110 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~ 168 (190)
T 2i13_A 110 ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168 (190)
T ss_dssp TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCC
Confidence 77766653210 0123477777777776666666664433 577775
No 45
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=90.98 E-value=0.18 Score=40.03 Aligned_cols=52 Identities=19% Similarity=0.438 Sum_probs=37.1
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhh--------hccCCCCCCCC
Q 015267 342 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI--------HESLHNCPGCE 397 (410)
Q Consensus 342 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fi--------He~Lh~CPgC~ 397 (410)
|.+......|..|.++|.-- .-++-|-.|+.+||.+|-.+- ......|-.|.
T Consensus 15 W~pd~~~~~C~~C~~~Fs~~----~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~ 74 (84)
T 1z2q_A 15 WQEDEDAPACNGCGCVFTTT----VRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACY 74 (84)
T ss_dssp CCCTTTCCBCTTTCCBCCTT----SCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHH
T ss_pred cccCCCCCCCcCcCCccccc----hhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHH
Confidence 54555677899999999632 236899999999999997542 33445565554
No 46
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=90.81 E-value=0.16 Score=40.13 Aligned_cols=40 Identities=20% Similarity=0.473 Sum_probs=29.8
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 015267 342 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 385 (410)
Q Consensus 342 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~f 385 (410)
|.+......|..|..+|.-- .-++-|-.|+.+||.+|-.+
T Consensus 13 W~~d~~~~~C~~C~~~Fs~~----~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 13 WLKDDEATHCRQCEKEFSIS----RRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp --CCCCCCBCTTTCCBCBTT----BCCEECTTTCCEECSGGGCE
T ss_pred cccCccCCcccCcCCcccCc----cccccCCCCCCEEChHHhCC
Confidence 33444566899999999632 23688999999999999764
No 47
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.67 E-value=0.2 Score=39.74 Aligned_cols=39 Identities=21% Similarity=0.530 Sum_probs=30.2
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccch
Q 015267 342 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI 384 (410)
Q Consensus 342 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~ 384 (410)
|.+......|..|..+|.-- .-+.-|-.|+.+||..|-.
T Consensus 8 W~pd~~~~~C~~C~~~F~~~----~RrHHCR~CG~vfC~~Cs~ 46 (84)
T 1x4u_A 8 RYPTNNFGNCTGCSATFSVL----KKRRSCSNCGNSFCSRCCS 46 (84)
T ss_dssp SCSCCCCSSCSSSCCCCCSS----SCCEECSSSCCEECTTTSC
T ss_pred cccCCCCCcCcCcCCccccc----hhhhhhcCCCcEEChhhcC
Confidence 44445567899999999532 2368899999999999964
No 48
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.63 E-value=0.21 Score=38.32 Aligned_cols=73 Identities=18% Similarity=0.347 Sum_probs=49.0
Q ss_pred CCCCCCCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC--------CCCCceeeCC
Q 015267 302 LPTDCRICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG--------NKPGLYVACP 372 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLarsyh-HlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~--------~~~~~~~~C~ 372 (410)
-|-.|+.|+..+.+...|.+-.- |. .. ....|..|.+.|.... -.....|.|+
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 68 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRCHT-GV-----------------KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGGCC-CC-----------------CSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS
T ss_pred cCeECCCCCCccCCHHHHHHHHHhcC-CC-----------------CCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC
Confidence 35567788888888877765432 11 00 1235888888776432 0122359999
Q ss_pred CCCcccccccchhhhccCCC
Q 015267 373 KCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 373 ~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|+..|=..=++..|...|.
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~ 88 (96)
T 2dmd_A 69 ICPYASRNSSQLTVHLRSHT 88 (96)
T ss_dssp SSSCEESSHHHHHHHHTTCC
T ss_pred CCCCccCCHHHHHHHHHHhc
Confidence 99999998888989988775
No 49
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=90.07 E-value=0.32 Score=34.27 Aligned_cols=47 Identities=26% Similarity=0.408 Sum_probs=35.2
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 398 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~ 398 (410)
...|.-|...|..+ .....-+.|+..||.+|-.-.-..-..||-|..
T Consensus 5 ~~~C~IC~~~~~~~----~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~ 51 (55)
T 1iym_A 5 GVECAVCLAELEDG----EEARFLPRCGHGFHAECVDMWLGSHSTCPLCRL 51 (55)
T ss_dssp SCCCTTTCCCCCTT----SCCEECSSSCCEECTTHHHHTTTTCCSCSSSCC
T ss_pred CCcCccCCccccCC----CceEECCCCCCcccHHHHHHHHHcCCcCcCCCC
Confidence 45799999887542 124557789999999997655566789999965
No 50
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=89.92 E-value=0.15 Score=40.98 Aligned_cols=78 Identities=19% Similarity=0.437 Sum_probs=55.7
Q ss_pred CCCCCCCCCceecCchhHHhh--hcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC-----------CCCCce
Q 015267 302 LPTDCRICGLQLVSSPHLARS--YHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG-----------NKPGLY 368 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars--yhHlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~-----------~~~~~~ 368 (410)
-|-.|+.|+..+.+...|.+- .|+- . ....|.-|.+.|.... ......
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~ 66 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNRKHTG--E-----------------KPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHHHHSS--C-----------------CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHhCCC--C-----------------CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC
Confidence 467899999999999888764 2321 1 1235888988885431 122346
Q ss_pred eeCCCCCcccccccchhhhccCC------CCCCCCC
Q 015267 369 VACPKCKKHFCLECDIYIHESLH------NCPGCES 398 (410)
Q Consensus 369 ~~C~~C~~~FC~dCD~fiHe~Lh------~CPgC~~ 398 (410)
|.|+.|+..|=..=++..|...| .|+.|..
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~ 102 (124)
T 2dlq_A 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ 102 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCC
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccc
Confidence 99999999999888887776554 5998864
No 51
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=89.31 E-value=0.19 Score=42.93 Aligned_cols=35 Identities=23% Similarity=0.632 Sum_probs=28.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 385 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~f 385 (410)
....|+.|..+|.-- .-++-|-.|+.+||..|-.+
T Consensus 68 ~~~~C~~C~~~Fs~~----~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 68 EVQNCMACGKGFSVT----VRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GCCBCTTTCCBCCSS----SCCEECTTTCCEECGGGSCE
T ss_pred CCCCCcCcCCccccc----cccccCCCCCeEEChHHhCC
Confidence 456899999999632 23689999999999999765
No 52
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=89.15 E-value=0.058 Score=44.73 Aligned_cols=94 Identities=17% Similarity=0.439 Sum_probs=58.2
Q ss_pred eeEcCCCCcccccCCCCCCCCCceecCchhHHhhhcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCce
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLY 368 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~LvssphLarsyhHlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~ 368 (410)
..+|-.|....-.-...||+|+..+-.. .++.++ .. .....|..|+..|..+... ...
T Consensus 34 H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~-----~l~~l~-----i~-----------~~~~~C~iC~~~~~~~~~~-~~~ 91 (133)
T 4ap4_A 34 HVFCSQCLRDSLKNANTCPTCRKKINHK-----RYHPIY-----IG-----------SGTVSCPICMDGYSEIVQN-GRL 91 (133)
T ss_dssp CEEEHHHHHHHHTTCSBCTTTCCBCTTT-----CEEECB-----CS-----------SSSCBCTTTCCBHHHHHHT-TCC
T ss_pred ChhhHHHHHHHHHhCCCCCCCCCcCccc-----cccccc-----cC-----------CCCCCCCCCCCcccccccc-Ccc
Confidence 3455555555545667899999876322 122221 11 1345799999877542100 112
Q ss_pred eeCCCCCcccccccchhhhccCCCCCCCCCCCCCCC
Q 015267 369 VACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNP 404 (410)
Q Consensus 369 ~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~ 404 (410)
.....|+..||.+|-.--.+.-..||-|........
T Consensus 92 ~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 92 IVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp EEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred eEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhc
Confidence 356789999999997666667789999987555443
No 53
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=89.04 E-value=0.22 Score=40.13 Aligned_cols=36 Identities=25% Similarity=0.517 Sum_probs=28.5
Q ss_pred CCCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 015267 346 RSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 385 (410)
Q Consensus 346 ~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~f 385 (410)
.....|..|..+|.-- .-++-|..|+.+||..|-.+
T Consensus 18 ~~~~~C~~C~~~F~~~----~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 18 SEAPNCMNCQVKFTFT----KRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp GGCCBCTTTCCBCCSS----SCCEECTTTCCEECGGGSCE
T ss_pred ccCCcCcCCCCcccch----hhCccccCCCCEECCcccCC
Confidence 3456899999999632 23689999999999999864
No 54
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=89.00 E-value=0.18 Score=39.59 Aligned_cols=43 Identities=26% Similarity=0.577 Sum_probs=29.8
Q ss_pred ccccccccccCCC--------CCCCceeeCCCCCcccccccchhhhccCCC
Q 015267 350 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 350 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.-|.+.|.... -.....|.|+.|+..|-..-++..|...|.
T Consensus 47 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~ 97 (106)
T 2ee8_A 47 TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97 (106)
T ss_dssp BCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred CCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence 4777776665321 011235899999999998888888887774
No 55
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=88.97 E-value=0.23 Score=42.07 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=26.5
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+.|+..|- +-|-.|+.||..+.+..+|.+-
T Consensus 22 ~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H 69 (133)
T 2lt7_A 22 YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH 69 (133)
T ss_dssp EEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHH
T ss_pred CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhh
Confidence 599999988665 3456899999998888888653
No 56
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=88.79 E-value=0.16 Score=41.02 Aligned_cols=52 Identities=27% Similarity=0.609 Sum_probs=38.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhccC-CCCCCCCCCCCCCCccc
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL-HNCPGCESLRHSNPIVA 407 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~L-h~CPgC~~~~~~~~~~~ 407 (410)
..|.-|+..|.. ...|..|++.||.+|=.-.-..- ..||-|-.......++.
T Consensus 23 ~~C~IC~~~~~~-------p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~ 75 (100)
T 3lrq_A 23 FRCFICMEKLRD-------ARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 75 (100)
T ss_dssp TBCTTTCSBCSS-------EEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEE
T ss_pred CCCccCCccccC-------ccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHh
Confidence 479999987753 35679999999999975444444 69999987655544443
No 57
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=88.76 E-value=0.13 Score=44.93 Aligned_cols=84 Identities=27% Similarity=0.557 Sum_probs=60.8
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 352 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~ 352 (410)
.|.|+.|+..|- +-|-.|+.|+..+.+...|.+-. |+- .....|.
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~ 137 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG-------------------EKPYKCP 137 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC-------------------CCCEECT
T ss_pred CccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC-------------------CCCeECC
Confidence 699999988764 35678999999999988886642 221 0133699
Q ss_pred cccccccCCCC--------CCCceeeCCCCCcccccccchhhhccCC
Q 015267 353 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 353 ~C~~~~~~~~~--------~~~~~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.+.|..... .....|.|+.|+..|=..=++-.|...|
T Consensus 138 ~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H 184 (190)
T 2i13_A 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184 (190)
T ss_dssp TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhc
Confidence 99988865320 1123699999999998877787887766
No 58
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.75 E-value=0.37 Score=36.16 Aligned_cols=55 Identities=20% Similarity=0.500 Sum_probs=39.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCcccC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 408 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~~~~ 408 (410)
....|.-|...|..+ ..-..|++.||.+|=.-.-+.-..||-|........+..|
T Consensus 14 ~~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 68 (72)
T 2djb_A 14 PYILCSICKGYLIDA-------TTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSG 68 (72)
T ss_dssp GGGSCTTTSSCCSSC-------EECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCC
T ss_pred CCCCCCCCChHHHCc-------CEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccccccc
Confidence 355799998777532 3456899999999975444556799999876665555444
No 59
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=88.32 E-value=0.78 Score=34.67 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=38.8
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCcccC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 408 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~~~~ 408 (410)
....|.-|+..|..+. .... -.|++.||.+|-.-.-+.-..||-|-.......+..|
T Consensus 14 ~~~~C~IC~~~~~~~~----~~~~-~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 70 (78)
T 2ect_A 14 SGLECPVCKEDYALGE----SVRQ-LPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATN 70 (78)
T ss_dssp SSCCCTTTTSCCCTTS----CEEE-CTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSCCC
T ss_pred CCCCCeeCCccccCCC----CEEE-eCCCCeecHHHHHHHHHcCCcCcCcCCccCCcccCCC
Confidence 4568999998875431 1122 2499999999986555556899999876655544433
No 60
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=87.99 E-value=0.51 Score=35.83 Aligned_cols=53 Identities=28% Similarity=0.501 Sum_probs=36.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc------CCCCCCCCCCCCCCCccc
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES------LHNCPGCESLRHSNPIVA 407 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~------Lh~CPgC~~~~~~~~~~~ 407 (410)
....|.-|...+..+ ... .|++.||.+|-.-.-+. -..||.|........+..
T Consensus 18 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~ 76 (85)
T 2ecw_A 18 EEVTCPICLELLKEP-------VSA-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKP 76 (85)
T ss_dssp TTTSCTTTCSCCSSC-------EEC-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEE
T ss_pred cCCCCcCCChhhCcc-------eeC-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCc
Confidence 355899999777542 234 49999999997543333 678999987655444433
No 61
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=87.94 E-value=0.58 Score=35.38 Aligned_cols=56 Identities=21% Similarity=0.520 Sum_probs=38.7
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc--CCCCCCCCCC-CCCCCcccCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES--LHNCPGCESL-RHSNPIVANE 409 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~--Lh~CPgC~~~-~~~~~~~~~~ 409 (410)
....|.-|...|..+ ..-+.|++.||.+|=.-.-.. ...||-|... ...+.++.|.
T Consensus 14 ~~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~ 72 (74)
T 2yur_A 14 DELLCLICKDIMTDA-------VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALSGPS 72 (74)
T ss_dssp GGGSCSSSCCCCTTC-------EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTTTCTT
T ss_pred CCCCCcCCChHHhCC-------eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccccccCC
Confidence 345799998777542 345669999999996433332 3689999874 5566666664
No 62
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=87.07 E-value=0.29 Score=34.92 Aligned_cols=24 Identities=33% Similarity=0.881 Sum_probs=20.9
Q ss_pred eeEcCCCCcccc----------cCCC--CCCCCCce
Q 015267 289 GYTCPRCKARVC----------ELPT--DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C----------~lP~--~C~~Cgl~ 312 (410)
-|+|+.|+-+|= ++|- .||+||..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCc
Confidence 599999999986 6888 89999964
No 63
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=85.85 E-value=20 Score=36.89 Aligned_cols=148 Identities=17% Similarity=0.117 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCe---------------------------eEEeecCCCCHHHHHHHH
Q 015267 92 SRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV---------------------------ANCLTDLGGSPESHIKAL 144 (410)
Q Consensus 92 ~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~---------------------------Ae~ls~ltgn~~~~i~~L 144 (410)
+-++.++.....+.++.-..-..-|||+..|.|+. ...+.+||.|..+..+.+
T Consensus 137 ddl~~lk~lg~~L~~~l~~~t~~~riGfGsFvDK~v~P~~~t~p~~~~nPC~~~~~c~~~f~fr~~l~LT~d~~~F~~~V 216 (454)
T 3vi3_B 137 DDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTTPFSYKNVLSLTNKGEVFNELV 216 (454)
T ss_dssp HHHHHHTTHHHHHHHHHTTTCSSEEEEEEEECCCSSTTTSCCSTTTTTCCSCSSSCCCCCCSEEEEEEEESCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEeccccCCcccCChHHhcCCCcCccCCCCCcceeeeeecCCCHHHHHHHH
Confidence 35667777777777776666778999999999862 113678999999999999
Q ss_pred hhhcCCCCc----chHHHHHHHHHH---HHhCCCCCCCceEEEEEeCC-------------------------------C
Q 015267 145 MGKLGCSGD----SSLQNALDLVQG---LLSQIPSYGHREVLILYSAL-------------------------------S 186 (410)
Q Consensus 145 ~~~~~~~G~----~SLqnaL~~A~~---~L~~~p~~~sreILVi~~S~-------------------------------~ 186 (410)
.+.. ..|+ -+--.||..|.- .+. ..+ .+++|||++.. .
T Consensus 217 ~~~~-isGn~D~PEgg~DAl~Qaavc~~~ig-WR~--a~rllV~~TDa~fH~agDgkL~GIv~PNDg~CHL~~~~Yt~s~ 292 (454)
T 3vi3_B 217 GKQR-ISGNLDSPEGGFDAIMQVAVCGSLIG-WRN--VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNMYTMSH 292 (454)
T ss_dssp TTCC-CCCCSSSSBCHHHHHHHHHHCHHHHT-CCS--SEEEEEEEESSCBCCTTTTGGGTCCSCCCCCCCEETTEECCTT
T ss_pred hhcc-ccCCCcCCchhHHHHHHHhccccccC-Ccc--ceEEEEEECCCCcCcCCCccccceecCCCCccEeCCCcccccc
Confidence 8753 1111 122234443332 222 222 67888887622 1
Q ss_pred CCCcccHHHHHHHHHHcCeEEEEEEcch-hHHHHHHHHHhhCCeeEEeCCH--HHHHHHHH
Q 015267 187 TCDPGDIMETIQKCKESKIRCSVIGLSA-EMFICKHLCQDTGGSYSVALDE--SHFKELIM 244 (410)
Q Consensus 187 t~DpgdI~~ti~~akk~~IrV~vIgL~a-E~~iLk~la~~TgG~Y~va~d~--~hl~~lL~ 244 (410)
.-|+..|-+..++|.++||.+= .++.. ...+.+++++.-.|...-.+.+ ..+-+|+.
T Consensus 293 ~~DYPSv~ql~~~l~e~nI~~I-FAVt~~~~~~Y~~L~~~ip~s~vg~Ls~dSsNiv~LI~ 352 (454)
T 3vi3_B 293 YYDYPSIAHLVQKLSENNIQTI-FAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLII 352 (454)
T ss_dssp TSCCCCHHHHHHHHHHTTEEEE-EEEEGGGHHHHHHHHHHSTTEEEEEECTTCTTHHHHHH
T ss_pred cCCCCCHHHHHHHHHhcCCcEE-EEEcCccchHHHHHHHhCCCceeeEccccchhHHHHHH
Confidence 2477789999999999999753 33334 4578999999888876655544 34444443
No 64
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.69 E-value=0.69 Score=34.84 Aligned_cols=50 Identities=18% Similarity=0.382 Sum_probs=36.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
....|.-|+..|..+ ..+..-.|++.||.+|-.-.-..-..||-|.....
T Consensus 22 ~~~~C~IC~~~~~~~-----~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESR-----QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBT-----CEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCC-----CeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 456899999888543 13344459999999998665556679999976443
No 65
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=85.45 E-value=0.14 Score=43.72 Aligned_cols=46 Identities=24% Similarity=0.683 Sum_probs=31.8
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCE 397 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~ 397 (410)
...|.+|..+|.-- .-+..|-.|+.+||..|--.--.....|-.|-
T Consensus 19 ~~~C~~C~~~Fs~~----~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~ 64 (120)
T 1y02_A 19 EPSCKSCGAHFANT----ARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQ 64 (120)
T ss_dssp -CCCTTTCCCCSSG----GGCEECTTTCCEECGGGEEC----CCEEHHHH
T ss_pred cCcccCcCCccccc----cccccCCCCCCeeCHHHhCCCCCCceECHHHH
Confidence 45799999999532 23588999999999999765444456666663
No 66
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=85.37 E-value=0.89 Score=35.49 Aligned_cols=47 Identities=26% Similarity=0.664 Sum_probs=33.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccch-hh-hccCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YI-HESLHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-fi-He~Lh~CPgC~~~~ 400 (410)
....|.-|...|..+ ..-+.|++.||..|=. ++ ...-..||-|....
T Consensus 12 ~~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKDIMTDA-------VVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTEECSSC-------EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCCCCCCChhhcCc-------eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 456899999877643 3456699999999953 33 22346999998653
No 67
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=85.35 E-value=0.35 Score=43.44 Aligned_cols=24 Identities=38% Similarity=0.919 Sum_probs=20.6
Q ss_pred eeEcCCCCcccc-cCCCCCCCCCce
Q 015267 289 GYTCPRCKARVC-ELPTDCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C-~lP~~C~~Cgl~ 312 (410)
.|+|++|+-++= ++|..||+||-.
T Consensus 138 ~~~C~~CG~i~~~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 138 VYICPICGYTAVDEAPEYCPVCGAP 162 (170)
T ss_dssp EEECTTTCCEEESCCCSBCTTTCCB
T ss_pred eeEeCCCCCeeCCCCCCCCCCCCCC
Confidence 899999999865 578899999953
No 68
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=85.28 E-value=0.52 Score=36.31 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=26.4
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccch
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI 384 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~ 384 (410)
..|..|.++|.-- .-++-|-.|+.+||.+|-.
T Consensus 12 ~~C~~C~~~F~~~----~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 12 DACMICSKKFSLL----NRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp SBCTTTCCBCBTT----BCCEECTTTCCEECGGGSC
T ss_pred CcccCCCCccCCc----cccccCCCCCEEEcccccC
Confidence 4799999999632 2368999999999999974
No 69
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=85.23 E-value=0.38 Score=38.34 Aligned_cols=50 Identities=18% Similarity=0.396 Sum_probs=36.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCc
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 405 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~ 405 (410)
..|.-|...|.. ....+.|++.||.+|=.-.-+.-..||.|........+
T Consensus 23 ~~C~IC~~~~~~-------p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l 72 (99)
T 2y43_A 23 LRCGICFEYFNI-------AMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDL 72 (99)
T ss_dssp TBCTTTCSBCSS-------EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGC
T ss_pred CCcccCChhhCC-------cCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhC
Confidence 479999977753 24457899999999965444455799999875544333
No 70
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.20 E-value=1.2 Score=33.68 Aligned_cols=54 Identities=26% Similarity=0.522 Sum_probs=36.7
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc------CCCCCCCCCCCCCCCcccC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES------LHNCPGCESLRHSNPIVAN 408 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~------Lh~CPgC~~~~~~~~~~~~ 408 (410)
....|.-|...+..+ ..- .|++.||.+|-.-.-.. -..||.|........+..|
T Consensus 18 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n 77 (85)
T 2ecv_A 18 EEVTCPICLELLTQP-------LSL-DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 77 (85)
T ss_dssp CCCCCTTTCSCCSSC-------BCC-SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCS
T ss_pred CCCCCCCCCcccCCc-------eeC-CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCcc
Confidence 356899999877543 122 69999999997544333 6799999875554444333
No 71
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=85.02 E-value=0.11 Score=38.67 Aligned_cols=69 Identities=23% Similarity=0.455 Sum_probs=43.6
Q ss_pred CCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCceeeCCC
Q 015267 304 TDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVACPK 373 (410)
Q Consensus 304 ~~C~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C~~ 373 (410)
-.|+.|+..+.+...|.+-. |+- - ....|..|.+.|..... .....|.|+.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 62 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHSD--T-----------------RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHHT--C-----------------CCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT
T ss_pred ccCCCCcccccCchhHHHHHHHcCC--C-----------------CCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC
Confidence 45778888888888776532 221 0 12358888887754310 0123599999
Q ss_pred CCcccccccchhhhccCC
Q 015267 374 CKKHFCLECDIYIHESLH 391 (410)
Q Consensus 374 C~~~FC~dCD~fiHe~Lh 391 (410)
|+..|=..=++..|...|
T Consensus 63 C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 63 CGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp TSCEESSHHHHHHHHHHH
T ss_pred cchhhCChHHHHHHHHhh
Confidence 999987766666665443
No 72
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=84.27 E-value=0.76 Score=36.81 Aligned_cols=47 Identities=23% Similarity=0.646 Sum_probs=34.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhh-------hccCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI-------HESLHNCPGCE 397 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fi-------He~Lh~CPgC~ 397 (410)
....|..|..+|.-- .-+.-|-.|+.+||..|-.+- .+....|-.|.
T Consensus 8 ~~~~C~~C~~~F~~~----~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~ 61 (88)
T 1wfk_A 8 MESRCYGCAVKFTLF----KKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCH 61 (88)
T ss_dssp CCSBCTTTCCBCCSS----SCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHH
T ss_pred cCCCCcCcCCcccCc----cccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHH
Confidence 345899999999632 246899999999999997541 34455666664
No 73
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=84.22 E-value=25 Score=36.38 Aligned_cols=141 Identities=9% Similarity=0.016 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCee-----------------------------EEeecCCCCHHHHHHH
Q 015267 93 RMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA-----------------------------NCLTDLGGSPESHIKA 143 (410)
Q Consensus 93 Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~A-----------------------------e~ls~ltgn~~~~i~~ 143 (410)
-++.+++....+.++.-..-..-|||+.+|+|+.. ..+.+||.|..+..+.
T Consensus 127 dl~~lk~lg~~L~~~l~~~t~~~riGfgsFvDk~v~P~~~~~p~~~l~nPc~~~~~~c~p~f~fr~~l~LT~d~~~F~~~ 206 (472)
T 3t3p_B 127 DLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEE 206 (472)
T ss_dssp HHHHTTTHHHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCSHHHHHCTTTTTTSCCCCCCSEEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeccccCccccCChhhhhcCCCcccccCCCCCcceeEeeccCCCHHHHHHH
Confidence 55666666777777665666789999999998621 1256889999999999
Q ss_pred HhhhcCCCCc----chHHHHHHHHH---HHHhCCCCCCCceEEEEEeCCC------------------------------
Q 015267 144 LMGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALS------------------------------ 186 (410)
Q Consensus 144 L~~~~~~~G~----~SLqnaL~~A~---~~L~~~p~~~sreILVi~~S~~------------------------------ 186 (410)
+.+.. .+|+ -+--.||..|. ..+.=. ...+++|||++...
T Consensus 207 V~~~~-iSGn~D~PEgg~dAl~qaavC~~~igWR--~~a~rllV~~TDa~~H~agDgkL~GIv~pnDg~CHL~~~~~Y~~ 283 (472)
T 3t3p_B 207 VKKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWR--NDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSA 283 (472)
T ss_dssp HHHCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCC--SSSEEEEEEEESSCBCCTTGGGGGTCCCCCCCCCCBCTTCBBTT
T ss_pred Hhhcc-ccCCCCCCchHHHHHHHHhcchhhcCCC--CCceEEEEEECCCCcCcCCCccccceecCCCCceEECCCCcccc
Confidence 98753 1121 12234554444 233322 24567888876211
Q ss_pred --CCCcccHHHHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhCCeeEEeCCH
Q 015267 187 --TCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDE 236 (410)
Q Consensus 187 --t~DpgdI~~ti~~akk~~IrV~vIgL~aE~~iLk~la~~TgG~Y~va~d~ 236 (410)
.-|+..|-+..++|.++||.+-.-.-.....+.+++++.-.|...-.+.+
T Consensus 284 s~~~DYPSv~ql~~~l~e~nI~~IFAVt~~~~~~Y~~L~~~ip~s~vg~L~~ 335 (472)
T 3t3p_B 284 STTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSM 335 (472)
T ss_dssp TTTSCCCCHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTSTTCEEEECCT
T ss_pred cccCCCCCHHHHHHHHHhcCccEEEEEeccchhHHHHHHHhCCCceeeeccc
Confidence 23666788999999999987654334444678899998877765544433
No 74
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=83.90 E-value=11 Score=39.23 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCee----------------------------EEeecCCCCHHHHHHH
Q 015267 92 SRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA----------------------------NCLTDLGGSPESHIKA 143 (410)
Q Consensus 92 ~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~A----------------------------e~ls~ltgn~~~~i~~ 143 (410)
+-++.+++....+.++.-..-..-|||+.+|.|+.. .-+.+||.|..+..+.
T Consensus 147 ddl~~lk~lg~~L~~~l~~~t~~~RiGfGsFvDK~v~P~~~~~p~~l~~PC~~~~~~c~p~f~fr~~l~LT~d~~~F~~~ 226 (503)
T 3v4v_B 147 DDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSFHHVLSLTGDAQAFERE 226 (503)
T ss_dssp HHHHHHHHSSHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCHHHHHCCSSCSSSCCCCCCSEEEEEEEESCSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCcCcEEeeeeecccccCCcccCCHHHhcCCCcCCCCCCCCCcceEEEEEecCCHHHHHHH
Confidence 356667777777777766667889999999998621 1257889999999999
Q ss_pred HhhhcCCCCc----chHHHHHHHHH---HHHhCCCCCCCceEEEEEeCCC------------------------------
Q 015267 144 LMGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALS------------------------------ 186 (410)
Q Consensus 144 L~~~~~~~G~----~SLqnaL~~A~---~~L~~~p~~~sreILVi~~S~~------------------------------ 186 (410)
+.+.. .+|+ -+--.||..|. ..+.=. . .+++|||++...
T Consensus 227 V~~~~-iSGnlD~PEggfDAlmQaavC~~~IgWR-~--a~rllV~~TDA~fH~agDgkLaGIv~pNDg~CHL~~~~~Yt~ 302 (503)
T 3v4v_B 227 VGRQS-VSGNLDSPEGGFDAILQAALCQEQIGWR-N--VSRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSR 302 (503)
T ss_dssp HTTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCC-S--SEEEEEEEESSCBCCTTGGGTTTCCSCCCSSCCBCTTSBBGG
T ss_pred HhhcC-ccCCCCCCchHHHHHHHHhhcccccCCC-c--ceEEEEEECCCCcCcCCCccccceecCCCCCeEECCCCcccc
Confidence 98653 1121 12224444444 233323 2 457888876211
Q ss_pred --CCCcccHHHHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhCCeeEEeCCH
Q 015267 187 --TCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDE 236 (410)
Q Consensus 187 --t~DpgdI~~ti~~akk~~IrV~vIgL~aE~~iLk~la~~TgG~Y~va~d~ 236 (410)
.-|+..|-+..++|.++||.+-.-.-.....+.+++++.-.|...-.+.+
T Consensus 303 s~~~DYPSv~ql~~kL~ennI~~IFAVt~~~~~~Y~~L~~~ip~s~vg~Ls~ 354 (503)
T 3v4v_B 303 STEFDYPSVGQVAQALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSE 354 (503)
T ss_dssp GGGSCCCCHHHHHHHHHHHTEEEEEEECSSSHHHHHHHHTTSTTCEEEECCT
T ss_pred ccccCCCCHHHHHHHHHhcCCeEEEEEcccchhHHHHHHHhCCCceeeEccc
Confidence 13566788999999999996543333344678999998887776655544
No 75
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=83.61 E-value=1.2 Score=31.15 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=34.9
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 400 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~ 400 (410)
...|.-|...|.... .......|+..||.+|-.-.-..-..||-|....
T Consensus 5 ~~~C~IC~~~~~~~~----~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTSR----VVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTTT----SCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSS
T ss_pred CCcCcccChhhcCCC----cCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcC
Confidence 457999998775321 2345667999999999765444448999997543
No 76
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=83.56 E-value=1.2 Score=35.81 Aligned_cols=40 Identities=23% Similarity=0.520 Sum_probs=29.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
....|+.|.+.+.- ...|.| +|+..||..= -|-.-|+|++
T Consensus 24 ~~~rC~~C~kkvgl-----~~~f~C-rCg~~FC~~H---Ry~e~H~C~f 63 (85)
T 1wff_A 24 IMKHCFLCGKKTGL-----ATSFEC-RCGNNFCASH---RYAEAHGCNY 63 (85)
T ss_dssp CCCBCSSSCCBCSS-----SSCEEC-TTCCEECTTT---CSTGGGTCCS
T ss_pred cCccchhhCCeecc-----cCCeEc-CCCCEecccC---CCccCCCCcc
Confidence 45689999977642 126999 5999999752 3347899987
No 77
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=82.35 E-value=0.47 Score=43.12 Aligned_cols=24 Identities=21% Similarity=0.502 Sum_probs=21.2
Q ss_pred eeEcCCCCcccc--cCCCCCCCCCce
Q 015267 289 GYTCPRCKARVC--ELPTDCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C--~lP~~C~~Cgl~ 312 (410)
-|+|+.|+-++= ++|-.||+||-.
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~~ 180 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAHP 180 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCCB
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcCC
Confidence 799999999984 689999999964
No 78
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.30 E-value=0.96 Score=35.90 Aligned_cols=75 Identities=12% Similarity=0.160 Sum_probs=44.4
Q ss_pred CCCCCCCCceecCchhHHhhhcccCCCCCCcccCccCCCCCCCCCCCccccccccc--cCCCC--------CCCceeeCC
Q 015267 303 PTDCRICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSL--LSSGN--------KPGLYVACP 372 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLarsyhHlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~--~~~~~--------~~~~~~~C~ 372 (410)
|-.|+.|+..+.+...|.+-... -..+.+. ....|..|.+.| ..... .....|.|+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~---~~h~~~~-----------~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~ 84 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNE---TGHYRDD-----------NHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM 84 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHH---TCCCBCS-----------CCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred CEECCccCchhcCHHHHHHHHHH---hCccccC-----------CCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence 34556678888888777654321 0001110 112377887777 43321 123369999
Q ss_pred CCCcccccccchhhhccCC
Q 015267 373 KCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 373 ~C~~~FC~dCD~fiHe~Lh 391 (410)
.|+..|=..=++-.|...|
T Consensus 85 ~C~k~f~~~~~L~~H~~~h 103 (115)
T 2dmi_A 85 YCGHSFESLQDLSVHMIKT 103 (115)
T ss_dssp SSCCBCSSHHHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHHHHh
Confidence 9999998888888776544
No 79
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.15 E-value=1.3 Score=32.96 Aligned_cols=49 Identities=24% Similarity=0.441 Sum_probs=34.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~ 400 (410)
....|.-|+..|..+. ..... .|++.||.+|-.-.-..-..||-|-...
T Consensus 14 ~~~~C~IC~~~~~~~~----~~~~~-~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~ 62 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRD----ELGIC-PCKHAFHRKCLIKWLEVRKVCPLCNMPV 62 (74)
T ss_dssp CSCBCSSSCCBCCSSS----CEEEE-TTTEEEEHHHHHHHHHHCSBCTTTCCBC
T ss_pred CCCCCcCCCcccCCCC----cEEEc-CCCCEecHHHHHHHHHcCCcCCCcCccc
Confidence 4568999998885431 12223 4999999999765555566999997643
No 80
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=81.69 E-value=1.3 Score=33.27 Aligned_cols=53 Identities=21% Similarity=0.434 Sum_probs=35.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc-------CCCCCCCCCCCCCCCccc
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-------LHNCPGCESLRHSNPIVA 407 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~-------Lh~CPgC~~~~~~~~~~~ 407 (410)
....|.-|...|..+ ..- .|++.||.+|=.-.-+. -..||-|........+..
T Consensus 11 ~~~~C~IC~~~~~~p-------~~l-~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~ 70 (79)
T 2egp_A 11 EEVTCPICLELLTEP-------LSL-DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQA 70 (79)
T ss_dssp CCCEETTTTEECSSC-------CCC-SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGT
T ss_pred cCCCCcCCCcccCCe-------eEC-CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCc
Confidence 456899999887643 112 69999999996532222 678999987555444433
No 81
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=81.64 E-value=0.76 Score=35.01 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=28.5
Q ss_pred ccccccccccCCC----------CCCCceeeCCCCCcccccccchhhhc-cCCC
Q 015267 350 TCFGCQQSLLSSG----------NKPGLYVACPKCKKHFCLECDIYIHE-SLHN 392 (410)
Q Consensus 350 ~C~~C~~~~~~~~----------~~~~~~~~C~~C~~~FC~dCD~fiHe-~Lh~ 392 (410)
.|.-|.+.|.... ......|.|+.|+..|=..=++-.|- ..|.
T Consensus 37 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 37 SCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp ECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred cCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence 5777777775431 11124689999999998877777775 4663
No 82
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=81.28 E-value=0.71 Score=34.00 Aligned_cols=24 Identities=29% Similarity=0.688 Sum_probs=20.8
Q ss_pred eeEcCCCCccccc-----------------CCC--CCCCCCce
Q 015267 289 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~-----------------lP~--~C~~Cgl~ 312 (410)
-|+|+.|+-+|=. ||. .||+||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVG 45 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCC
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 5999999999875 888 89999963
No 83
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=80.99 E-value=1.8 Score=40.28 Aligned_cols=33 Identities=21% Similarity=0.531 Sum_probs=27.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 385 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~f 385 (410)
..|..|..+|.-- .-++-|..|+.+||..|..+
T Consensus 165 ~~C~~C~~~F~~~----~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 165 EECHRCRVQFGVM----TRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp SBCTTTCCBCBTT----BCCEECTTTCCEECTTTCCE
T ss_pred CCCcCcCCCCCcc----ccccccCCCcCEeChhhcCC
Confidence 4899999999632 23689999999999999864
No 84
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=80.56 E-value=1.5 Score=32.15 Aligned_cols=49 Identities=20% Similarity=0.259 Sum_probs=34.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~ 400 (410)
....|.-|...|.... ......|++.||.+|-.-.-..-..||-|....
T Consensus 13 ~~~~C~IC~~~~~~~~-----~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~ 61 (69)
T 2kiz_A 13 TEEKCTICLSILEEGE-----DVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 61 (69)
T ss_dssp CCCSBTTTTBCCCSSS-----CEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBS
T ss_pred CCCCCeeCCccccCCC-----cEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccc
Confidence 4568999997774321 233446999999999765444556799997643
No 85
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=80.55 E-value=1.3 Score=33.65 Aligned_cols=41 Identities=27% Similarity=0.635 Sum_probs=29.1
Q ss_pred CCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 345 NRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 345 ~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
......|..|.+.+.- ..|.| .|+..||..=- |-.-|+|++
T Consensus 12 ~~~~~rC~~C~kkvgl------~~f~C-rCg~~FC~~HR---~~e~H~C~f 52 (64)
T 1wg2_A 12 VRPNNRCFSCNKKVGV------MGFKC-KCGSTFCGSHR---YPEKHECSF 52 (64)
T ss_dssp SCCSCSCTTTCCCCTT------SCEEC-TTSCEECSSSC---SSTTTTCCC
T ss_pred CCcCCcChhhCCcccc------cCeEe-ecCCEecccCC---CccccCCCc
Confidence 3346689999977632 25999 99999997632 345778875
No 86
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=80.37 E-value=0.76 Score=36.60 Aligned_cols=24 Identities=29% Similarity=0.737 Sum_probs=21.0
Q ss_pred eeEcCCCCccccc-----------------CCC--CCCCCCce
Q 015267 289 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~-----------------lP~--~C~~Cgl~ 312 (410)
-|+|+.|+-+|=. ||. .||+||-.
T Consensus 27 ~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 27 LFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred eEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 7999999999974 887 89999963
No 87
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=80.03 E-value=0.91 Score=41.89 Aligned_cols=33 Identities=21% Similarity=0.609 Sum_probs=27.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 385 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~f 385 (410)
..|..|.++|.-- .-++-|-.|+.+||..|-.+
T Consensus 162 ~~C~~C~~~F~~~----~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 162 RVCHRCRVEFTFT----NRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp SBCTTTCCBCCSS----SCCEECTTTCCEECSTTSCE
T ss_pred CccCCCCCccCCc----ccccccCCcCCEEChHHhCC
Confidence 5899999999632 24688999999999999754
No 88
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=79.65 E-value=1.7 Score=31.82 Aligned_cols=47 Identities=19% Similarity=0.369 Sum_probs=33.8
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
...|.-|...+..+ ..-..|++.||.+|-.-.-+.-..||-|.....
T Consensus 5 ~~~C~IC~~~~~~~-------~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNY-------SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSC-------EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCC-------cEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 45799998776432 234569999999997554455689999976443
No 89
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=79.33 E-value=0.96 Score=35.79 Aligned_cols=40 Identities=25% Similarity=0.678 Sum_probs=30.2
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhh---hccC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI---HESL 390 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fi---He~L 390 (410)
..|..|...+...++ .....||.|+..||+.|-.-- |+-+
T Consensus 26 ~wCP~C~~~~~~~~~--~~~v~C~~C~~~FC~~C~~~w~~~H~~~ 68 (86)
T 2ct7_A 26 LWCAQCSFGFIYERE--QLEATCPQCHQTFCVRCKRQWEEQHRGR 68 (86)
T ss_dssp ECCSSSCCCEECCCS--CSCEECTTTCCEECSSSCSBCCTTTTTS
T ss_pred eECcCCCchheecCC--CCceEeCCCCCccccccCCchhhcCCCC
Confidence 369999877654322 235789999999999999877 7754
No 90
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=79.27 E-value=0.53 Score=37.34 Aligned_cols=42 Identities=26% Similarity=0.605 Sum_probs=22.3
Q ss_pred ccccccccccCCCC--------CCCceeeC--CCCCcccccccchhhhccCC
Q 015267 350 TCFGCQQSLLSSGN--------KPGLYVAC--PKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 350 ~C~~C~~~~~~~~~--------~~~~~~~C--~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|..|.+.|..... .....|.| +.|+..|=..-++-.|..+|
T Consensus 68 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred cCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence 46666666653210 01124677 66777766555555554443
No 91
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=79.00 E-value=0.88 Score=36.81 Aligned_cols=48 Identities=23% Similarity=0.549 Sum_probs=34.8
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHS 402 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~ 402 (410)
...|.-|...|.. ......|++.||..|=.-.-+.-..||-|......
T Consensus 15 ~~~C~IC~~~~~~-------p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGGYFID-------ATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSSBCSS-------EEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred cCCCccCChHHhC-------cCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 4579999877753 24556899999999965444444899999875443
No 92
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=78.72 E-value=0.86 Score=33.58 Aligned_cols=58 Identities=17% Similarity=0.412 Sum_probs=39.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCc
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 405 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~ 405 (410)
....|.-|...+..+.. ......-..|++.||.+|=.-.-+.-..||.|-.......+
T Consensus 9 ~~~~C~IC~~~~~~~~~-~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQ-NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 66 (71)
T ss_dssp TCCBCTTTCCBHHHHHT-TTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSC
T ss_pred CCCCCcccChhhhcccc-ccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhhe
Confidence 45689999988754310 01234567899999999975554555799999875554433
No 93
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=78.59 E-value=0.96 Score=32.91 Aligned_cols=24 Identities=29% Similarity=0.721 Sum_probs=20.0
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCce
Q 015267 289 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C-----------------~lP~--~C~~Cgl~ 312 (410)
-|+|+.|+-+|= +||. .||+||..
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAP 44 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCC
Confidence 489999999886 5887 89999863
No 94
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=78.09 E-value=0.71 Score=36.41 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=26.2
Q ss_pred ccccccccccCCC--------CCCCceeeCCCCCcccccccchhhhccC
Q 015267 350 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 350 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
.|.-|.+.|.... -.....|.|+.|+..|=..-++-.|...
T Consensus 39 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (110)
T 2csh_A 39 GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS 87 (110)
T ss_dssp ECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence 4666766665431 0112358999999998877777777543
No 95
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=77.92 E-value=1.6 Score=32.95 Aligned_cols=54 Identities=9% Similarity=0.075 Sum_probs=36.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc-CCCCCCCCCCCCCCCcccC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLRHSNPIVAN 408 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~-Lh~CPgC~~~~~~~~~~~~ 408 (410)
..-.|.-|...|.++ ..- .|++.||..|=.-.-+. -..||-|........+..|
T Consensus 7 ~~~~C~IC~~~~~~P-------v~~-~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n 61 (78)
T 1t1h_A 7 EYFRCPISLELMKDP-------VIV-STGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPN 61 (78)
T ss_dssp SSSSCTTTSCCCSSE-------EEE-TTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEEC
T ss_pred ccCCCCCccccccCC-------EEc-CCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccC
Confidence 356899999777543 222 59999999996433333 6789999876554444433
No 96
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=77.91 E-value=3.5 Score=29.35 Aligned_cols=43 Identities=23% Similarity=0.417 Sum_probs=30.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~ 400 (410)
....|.-|...|..+. --.|++.||.+|=.- .-..||-|....
T Consensus 5 ~~~~C~IC~~~~~~p~--------~l~CgH~fC~~Ci~~---~~~~CP~Cr~~~ 47 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPK--------LLPCLHTLCSGCLEA---SGMQCPICQAPW 47 (56)
T ss_dssp CCSSCSSSCSSCBCCS--------CSTTSCCSBTTTCSS---SSSSCSSCCSSS
T ss_pred cCCCceEeCCccCCeE--------EcCCCCcccHHHHcc---CCCCCCcCCcEe
Confidence 3457999998776431 235999999999433 566899997643
No 97
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=77.35 E-value=0.68 Score=34.73 Aligned_cols=28 Identities=39% Similarity=0.829 Sum_probs=19.2
Q ss_pred cee-eeccCccccCeeEcCCCCcccccCC
Q 015267 276 SIC-SCHKEVKVGVGYTCPRCKARVCELP 303 (410)
Q Consensus 276 a~C-~CH~~~~~~~GY~Cp~C~s~~C~lP 303 (410)
.+| .|+.......-|.||+|+.+||+|+
T Consensus 12 ~~C~vC~~~~~~~akY~CPrC~~rYCSl~ 40 (59)
T 1x4s_A 12 GPCGFCPAGEVQPARYTCPRCNAPYCSLR 40 (59)
T ss_dssp EEECSSCTTCCEEECEECTTTCCEESSHH
T ss_pred CcCcCCCCCcCCCccccCcCCCCCccChH
Confidence 355 5664221222799999999999985
No 98
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=76.99 E-value=2.1 Score=34.36 Aligned_cols=50 Identities=22% Similarity=0.506 Sum_probs=33.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhccC---CCCCCCCCCCCCCCcc
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL---HNCPGCESLRHSNPIV 406 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~L---h~CPgC~~~~~~~~~~ 406 (410)
..|.-|...+..+ .. ..|++.||.+|=.-.-+.- ..||-|........+.
T Consensus 22 ~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~ 74 (112)
T 1jm7_A 22 LECPICLELIKEP-------VS-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74 (112)
T ss_dssp TSCSSSCCCCSSC-------CB-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCB
T ss_pred CCCcccChhhcCe-------EE-CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcC
Confidence 4699998777543 11 3699999999964333322 4899998755544443
No 99
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=76.63 E-value=1.6 Score=34.36 Aligned_cols=49 Identities=18% Similarity=0.421 Sum_probs=34.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~ 400 (410)
....|.-|+..|.... ....-| |++.||.+|-.-.-..-..||-|-...
T Consensus 39 ~~~~C~IC~~~~~~~~----~~~~l~-C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~ 87 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGD----VATELP-CHHYFHKPCVSIWLQKSGTCPVCRCMF 87 (91)
T ss_dssp SCSEETTTTEECCTTC----EEEEET-TTEEEEHHHHHHHHTTTCBCTTTCCBS
T ss_pred CCCCCcccChhhcCCC----cEEecC-CCChHHHHHHHHHHHcCCcCcCcCccC
Confidence 4568999998875321 123334 999999999765555667999997643
No 100
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=76.38 E-value=1.2 Score=32.67 Aligned_cols=24 Identities=33% Similarity=0.872 Sum_probs=19.7
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCce
Q 015267 289 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C-----------------~lP~--~C~~Cgl~ 312 (410)
-|+|+.|+-+|= +||- .||+||..
T Consensus 3 ~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVG 45 (54)
T ss_dssp CEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred ceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCc
Confidence 589999998876 6776 89999964
No 101
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=76.20 E-value=2.9 Score=34.25 Aligned_cols=50 Identities=22% Similarity=0.440 Sum_probs=33.9
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCcc
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIV 406 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~~ 406 (410)
...|.-|...|..+ ..-..|++.||..|=.-.-+ ..||-|........+.
T Consensus 22 ~~~C~IC~~~~~~p-------v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~~ 71 (117)
T 1jm7_B 22 LLRCSRCTNILREP-------VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLK 71 (117)
T ss_dssp TTSCSSSCSCCSSC-------BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCC
T ss_pred CCCCCCCChHhhCc-------cEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCcccccc
Confidence 34799999777543 22337999999999643323 6899998755444443
No 102
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.00 E-value=2.9 Score=30.47 Aligned_cols=50 Identities=22% Similarity=0.519 Sum_probs=35.1
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhh-ccCCCCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRHSNP 404 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiH-e~Lh~CPgC~~~~~~~~ 404 (410)
....|.-|...+..+. . ..|++.||.+|=.-.- ..-..||-|........
T Consensus 14 ~~~~C~IC~~~~~~p~-------~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 64 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPK-------Q-TECGHRFCESCMAALLSSSSPKCTACQESIVKDK 64 (66)
T ss_dssp CCEECTTTCCEESSCC-------C-CSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTT
T ss_pred cCCCCCCCChHhcCee-------E-CCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhh
Confidence 3568999998875431 1 4799999999965433 45568999987655443
No 103
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.58 E-value=1 Score=33.56 Aligned_cols=48 Identities=23% Similarity=0.387 Sum_probs=33.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHS 402 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~ 402 (410)
....|.-|+..+..+ ..- .|++.||.+|-.-.-..-..||-|......
T Consensus 14 ~~~~C~IC~~~~~~~-------~~~-~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 14 TVPECAICLQTCVHP-------VSL-PCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SCCBCSSSSSBCSSE-------EEE-TTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCccCCcccCCC-------EEc-cCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 456899999777432 223 499999999975433444789999875543
No 104
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=75.41 E-value=1.3 Score=34.13 Aligned_cols=24 Identities=25% Similarity=0.523 Sum_probs=20.8
Q ss_pred eeEcCCCCccccc-----------------CCC--CCCCCCce
Q 015267 289 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~-----------------lP~--~C~~Cgl~ 312 (410)
-|+|+.|+-+|=. ||. .||+||..
T Consensus 7 ~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 7 KYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp CEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred eEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCC
Confidence 6999999999873 888 89999974
No 105
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=75.40 E-value=0.9 Score=38.60 Aligned_cols=44 Identities=23% Similarity=0.523 Sum_probs=31.9
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 400 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~ 400 (410)
..|.-|...|..+ ... .|++.||.+|=.-.-+.-..||.|-...
T Consensus 54 ~~C~iC~~~~~~~-------~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 54 LQCIICSEYFIEA-------VTL-NCAHSFCSYCINEWMKRKIECPICRKDI 97 (138)
T ss_dssp SBCTTTCSBCSSE-------EEE-TTSCEEEHHHHHHHTTTCSBCTTTCCBC
T ss_pred CCCcccCcccCCc-------eEC-CCCCCccHHHHHHHHHcCCcCCCCCCcC
Confidence 3699999777542 222 5999999999655455668899997644
No 106
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=75.31 E-value=1.7 Score=31.56 Aligned_cols=24 Identities=33% Similarity=0.861 Sum_probs=19.5
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCce
Q 015267 289 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C-----------------~lP~--~C~~Cgl~ 312 (410)
-|+|+.|+-+|= +||. .||+||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 45 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGAS 45 (52)
T ss_dssp CEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCC
T ss_pred cEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCc
Confidence 599999998886 3777 89999863
No 107
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.95 E-value=2.6 Score=31.09 Aligned_cols=49 Identities=31% Similarity=0.663 Sum_probs=34.0
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhc---cCCCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGCESLRHSN 403 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe---~Lh~CPgC~~~~~~~ 403 (410)
....|.-|...+..+ ..- .|++.||.+|-.-.-+ .-..||-|.......
T Consensus 19 ~~~~C~IC~~~~~~~-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 19 EEVICPICLDILQKP-------VTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCBCTTTCSBCSSE-------EEC-TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred cCCEeccCCcccCCe-------EEc-CCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 456899999777532 222 7999999999754433 345899998765543
No 108
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=74.95 E-value=2.5 Score=33.00 Aligned_cols=39 Identities=21% Similarity=0.538 Sum_probs=28.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
....|+.|.+.+.- ..|.| .|+..||.. --|-.-|+|++
T Consensus 24 ~~~RC~~C~kkvgL------~~f~C-rCg~~FCs~---HRy~e~H~C~f 62 (74)
T 1wfp_A 24 TATRCLSCNKKVGV------TGFKC-RCGSTFCGT---HRYPESHECQF 62 (74)
T ss_dssp CCCBCSSSCCBCTT------TCEEC-TTSCEECTT---TCSTTTSCCCS
T ss_pred cCccchhhcCcccc------cceEe-ccCCEeccc---cCCCcCCCCcC
Confidence 45689999877642 25999 899999975 33445777765
No 109
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.75 E-value=0.86 Score=33.83 Aligned_cols=23 Identities=30% Similarity=1.015 Sum_probs=17.8
Q ss_pred eee-eccCccccCeeEcCCCCcccccCC
Q 015267 277 ICS-CHKEVKVGVGYTCPRCKARVCELP 303 (410)
Q Consensus 277 ~C~-CH~~~~~~~GY~Cp~C~s~~C~lP 303 (410)
+|. |+. .. -|.||+|+.+||+|+
T Consensus 14 ~C~vC~~---~~-kY~CPrC~~~yCSl~ 37 (56)
T 2yqq_A 14 VCVICLE---KP-KYRCPACRVPYCSVV 37 (56)
T ss_dssp CCTTTCS---CC-SEECTTTCCEESSHH
T ss_pred ccCcCcC---CC-eeeCCCCCCCeeCHH
Confidence 454 665 33 799999999999874
No 110
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=74.54 E-value=1.3 Score=35.61 Aligned_cols=23 Identities=26% Similarity=0.690 Sum_probs=20.3
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCc
Q 015267 289 GYTCPRCKARVC-----------------ELPT--DCRICGL 311 (410)
Q Consensus 289 GY~Cp~C~s~~C-----------------~lP~--~C~~Cgl 311 (410)
-|+|+.|+-+|= +||- .||+||-
T Consensus 35 ~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 76 (87)
T 1s24_A 35 KWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGA 76 (87)
T ss_dssp EEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCC
T ss_pred eEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCC
Confidence 799999998886 6887 8999996
No 111
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=74.54 E-value=1.4 Score=35.23 Aligned_cols=33 Identities=30% Similarity=0.583 Sum_probs=19.8
Q ss_pred eeEcC--CCCcccc-------------cCCCCCCCCCceecCchhHHh
Q 015267 289 GYTCP--RCKARVC-------------ELPTDCRICGLQLVSSPHLAR 321 (410)
Q Consensus 289 GY~Cp--~C~s~~C-------------~lP~~C~~Cgl~LvssphLar 321 (410)
.|.|| .|+..|- +-|-.|+.|+..+.+...|.+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~ 52 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKR 52 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHH
T ss_pred cccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHH
Confidence 46777 6665443 224467777777776666654
No 112
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=73.93 E-value=0.82 Score=37.82 Aligned_cols=45 Identities=29% Similarity=0.696 Sum_probs=34.5
Q ss_pred ccccccccccCCCCCCCceeeCCCCCcccccccchhhh-ccCCCCCCCCCCCC
Q 015267 350 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRH 401 (410)
Q Consensus 350 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiH-e~Lh~CPgC~~~~~ 401 (410)
.|--|..++. ...+---|+.+||.||-...- +.-..||+|.....
T Consensus 3 fC~~C~~Pi~-------iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 3 FCDKCGLPIK-------VYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp BCTTTCSBCS-------EEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred ecCccCCCeE-------EEeeeccccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 5788887775 355777899999999987653 66789999976443
No 113
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=73.89 E-value=2.7 Score=32.01 Aligned_cols=39 Identities=21% Similarity=0.483 Sum_probs=28.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
....|+.|.+.+.- ..|.| .|+..||..= -|-.-|+|++
T Consensus 14 ~~~rC~~C~kkvgl------~~f~C-rCg~~FC~~H---Ry~e~H~C~f 52 (64)
T 1wfh_A 14 RPNRCTVCRKRVGL------TGFMC-RCGTTFCGSH---RYPEVHGCTF 52 (64)
T ss_dssp SCCCCTTTCCCCCT------TCEEC-SSSCEECTTT---CSTTTTTCCC
T ss_pred cCCcChhhCCccCc------cCEEe-ecCCEecccc---CCcccCCCCc
Confidence 45689999976642 25999 7999999763 2345788875
No 114
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=73.60 E-value=1.2 Score=31.85 Aligned_cols=57 Identities=18% Similarity=0.408 Sum_probs=38.0
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCc
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 405 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~ 405 (410)
...|.-|...+..+.. ......-..|++.||.+|-.-.-+.-..||-|........+
T Consensus 3 ~~~C~IC~~~~~~~~~-~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 59 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQ-NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 59 (64)
T ss_dssp CCBCTTTCCBHHHHHH-TTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCE
T ss_pred CCCCCccChhhhCccc-cCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccce
Confidence 4479999877754210 01123456899999999986555556799999876554443
No 115
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=73.59 E-value=1.5 Score=40.26 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=19.7
Q ss_pred eeEcCCCCccccc-CCCCCCCCCce
Q 015267 289 GYTCPRCKARVCE-LPTDCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~-lP~~C~~Cgl~ 312 (410)
-|+|+.|+-++=. .|-.||+||-.
T Consensus 171 ~~~C~~CG~i~~g~~p~~CP~C~~~ 195 (202)
T 1yuz_A 171 FHLCPICGYIHKGEDFEKCPICFRP 195 (202)
T ss_dssp EEECSSSCCEEESSCCSBCTTTCCB
T ss_pred EEEECCCCCEEcCcCCCCCCCCCCC
Confidence 7999999998764 45599999964
No 116
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.47 E-value=2.1 Score=31.04 Aligned_cols=52 Identities=19% Similarity=0.473 Sum_probs=36.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESL 399 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~ 399 (410)
....|.-|...+..+.. ....+.-..|++.||.+|-.-.-+.-..||-|-..
T Consensus 14 ~~~~C~IC~~~~~~~~~-~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~ 65 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQ-NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKK 65 (69)
T ss_dssp CCCCCTTTCCCHHHHTT-TTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCC
T ss_pred CCCCCcccCcccccccc-ccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCc
Confidence 45689999987764311 11233556899999999986555556799999754
No 117
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.40 E-value=2.7 Score=31.95 Aligned_cols=47 Identities=26% Similarity=0.603 Sum_probs=34.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
....|.-|...|..+ .. ..|++.||.+|=.-.-+.-..||-|.....
T Consensus 14 ~~~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNP-------VV-TKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSE-------EE-CTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCe-------eE-ccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 356899999777532 22 479999999997555566779999987554
No 118
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=73.03 E-value=1.9 Score=35.62 Aligned_cols=45 Identities=20% Similarity=0.624 Sum_probs=31.8
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccc-hhhhccCCCCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECD-IYIHESLHNCPGCESLRH 401 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD-~fiHe~Lh~CPgC~~~~~ 401 (410)
..|.-|...|..+ .. ..|++.||.+|= .++...-..||-|-....
T Consensus 53 ~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 53 FQCICCQELVFRP-------IT-TVCQHNVCKDCLDRSFRAQVFSCPACRYDLG 98 (124)
T ss_dssp TBCTTTSSBCSSE-------EE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCcCChHHcCc-------EE-eeCCCcccHHHHHHHHhHCcCCCCCCCccCC
Confidence 4699999777543 11 279999999995 344445569999986443
No 119
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=72.60 E-value=4.1 Score=31.49 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=34.7
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhh-ccCCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRHS 402 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiH-e~Lh~CPgC~~~~~~ 402 (410)
....|.-|.-++... +...+.| .|++.||..|-.-+- +.-..||.|-.....
T Consensus 10 ~~~~CpICle~~~~~---d~~~~p~-~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCMEPLEID---DINFFPC-TCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCCBCCTT---TTTCCSS-TTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred cCCcCCccCccCccc---ccccccc-CCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 456899999877422 1123345 699999999965543 335689999864443
No 120
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=72.58 E-value=3.9 Score=33.79 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=43.7
Q ss_pred eeEcCCCCcccccCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCC--
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSG-- 362 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~--~C~~~~~~~~-- 362 (410)
-|.|+.|. |+.|+..+.+...|.+-. |+- . ....|. .|.+.|....
T Consensus 34 ~~~C~~c~---------C~~c~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l 85 (155)
T 2gli_A 34 EFVCHWGG---------CSRELRPFKAQYMLVVHMRRHTG--E-----------------KPHKCTFEGCRKSYSRLENL 85 (155)
T ss_dssp CCCCCBTT---------CTTTTCCCSSHHHHHHHTHHHHC--C-----------------CCCCCCSTTCCCCCSSHHHH
T ss_pred ceeCCCCC---------ccchhhhhhhHHHHHHHHHhcCC--C-----------------CCccCCCCCCCCcccCHHHH
Confidence 57777663 666777777766665432 211 0 122465 4777665431
Q ss_pred ------CCCCceeeCCC--CCcccccccchhhhc-cCC
Q 015267 363 ------NKPGLYVACPK--CKKHFCLECDIYIHE-SLH 391 (410)
Q Consensus 363 ------~~~~~~~~C~~--C~~~FC~dCD~fiHe-~Lh 391 (410)
-.....|.|+. |+..|=..=++-.|. ..|
T Consensus 86 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H 123 (155)
T 2gli_A 86 KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123 (155)
T ss_dssp HHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred HHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc
Confidence 01223578886 888887777777775 555
No 121
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=72.08 E-value=2.1 Score=35.68 Aligned_cols=24 Identities=25% Similarity=0.474 Sum_probs=13.0
Q ss_pred eeeCCC--CCcccccccchhhhccCC
Q 015267 368 YVACPK--CKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~--C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+. |+..|=..-++-.|...|
T Consensus 120 ~~~C~~~~C~k~f~~~~~L~~H~~~H 145 (155)
T 2rpc_A 120 PFKCEFEGCDRRFANSSDRKKHMHVH 145 (155)
T ss_dssp SBCCSSTTCCCCBSSHHHHHHSSTTT
T ss_pred CccCCCCCCCCccCCHHHHHHHHHHh
Confidence 355554 555555555555555444
No 122
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.79 E-value=3.3 Score=29.79 Aligned_cols=42 Identities=33% Similarity=0.748 Sum_probs=29.8
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhc---cCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGC 396 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe---~Lh~CPgC 396 (410)
....|.-|...|..+ ..- .|++.||.+|=.-.-+ .-..||-|
T Consensus 19 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKP-------VTI-DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSC-------EEC-TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCe-------EEe-CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 456899999877543 222 7999999999654433 45589987
No 123
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.39 E-value=3.7 Score=28.71 Aligned_cols=42 Identities=29% Similarity=0.627 Sum_probs=29.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhh-h--ccCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI-H--ESLHNCPGC 396 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fi-H--e~Lh~CPgC 396 (410)
....|.-|...+..+ .. ..|++.||.+|=.-. . ..-..||-|
T Consensus 14 ~~~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEP-------VI-IECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSC-------CC-CSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCcc-------Ee-CCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 456899999887643 11 369999999996543 2 355689987
No 124
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=70.09 E-value=3.7 Score=35.49 Aligned_cols=90 Identities=22% Similarity=0.559 Sum_probs=57.4
Q ss_pred eeEc--CCCCcccc--------------cCCCCCC--CCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCC
Q 015267 289 GYTC--PRCKARVC--------------ELPTDCR--ICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSR 348 (410)
Q Consensus 289 GY~C--p~C~s~~C--------------~lP~~C~--~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~ 348 (410)
-|.| +.|+..|- +-|-.|+ .|+..+.+...|.+-. +|.-. ...
T Consensus 42 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~-----------------~~~ 104 (190)
T 1tf6_A 42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK-----------------ICV 104 (190)
T ss_dssp SSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT-----------------TSC
T ss_pred CccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC-----------------cce
Confidence 5777 66766543 2345677 6777777777776542 23211 113
Q ss_pred Ccc--ccccccccCCCC--------CCCceeeCCC--CCcccccccchhhhccCCC---CCC
Q 015267 349 STC--FGCQQSLLSSGN--------KPGLYVACPK--CKKHFCLECDIYIHESLHN---CPG 395 (410)
Q Consensus 349 ~~C--~~C~~~~~~~~~--------~~~~~~~C~~--C~~~FC~dCD~fiHe~Lh~---CPg 395 (410)
..| ..|.+.|..... .....|.|+. |+..|=..-++..|...|. |+.
T Consensus 105 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~ 166 (190)
T 1tf6_A 105 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 166 (190)
T ss_dssp CEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCS
T ss_pred eeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCC
Confidence 468 789888864320 1223599987 9999988888888888764 676
No 125
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=70.00 E-value=0.79 Score=34.46 Aligned_cols=70 Identities=21% Similarity=0.363 Sum_probs=44.2
Q ss_pred CCCC--CCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCceeeCC
Q 015267 304 TDCR--ICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVACP 372 (410)
Q Consensus 304 ~~C~--~Cgl~LvssphLarsyh-HlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C~ 372 (410)
-.|+ .|+..+.+...|.+-.- |. .. ....|.-|.+.|..... .....|.|+
T Consensus 5 ~~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 66 (90)
T 1a1h_A 5 YACPVESCDRRFSQSGSLTRHIRIHT-GQ-----------------KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66 (90)
T ss_dssp EECCSSSCCCEESSHHHHHHHHHHHH-CC-----------------CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred eECCCCCCCCccCCHHHHHHHHHHhC-CC-----------------CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCC
Confidence 3455 48888888777765321 21 00 12358888877764320 012359999
Q ss_pred CCCcccccccchhhhccCC
Q 015267 373 KCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 373 ~C~~~FC~dCD~fiHe~Lh 391 (410)
.|+..|-..-++-.|...|
T Consensus 67 ~C~~~f~~~~~l~~H~~~H 85 (90)
T 1a1h_A 67 ICGRKFARSDERKRHTKIH 85 (90)
T ss_dssp TTCCEESSHHHHHHHHGGG
T ss_pred CCCchhCCHHHHHHHHHHh
Confidence 9999998888888887665
No 126
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=69.75 E-value=1.9 Score=42.78 Aligned_cols=43 Identities=21% Similarity=0.335 Sum_probs=31.0
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGC 396 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC 396 (410)
..+.|..|...|..- ...+|.|..|+..+|..|-..+. +|++=
T Consensus 356 ~~t~C~~C~~~~~g~---~~qg~~C~~C~~~~h~~C~~~~~----~C~~~ 398 (406)
T 2vrw_B 356 ETTSCKACQMLLRGT---FYQGYRCYRCRAPAHKECLGRVP----PCGRH 398 (406)
T ss_dssp SCCBCTTTCCBCCSS---SSCEEEETTTCCEECGGGGGGSC----CC---
T ss_pred CCCCCccccchhcee---CCCCCCCCCCcCccchhhhhhCC----CCCCC
Confidence 456899999888532 23479999999999999977664 37654
No 127
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=69.32 E-value=2.4 Score=28.97 Aligned_cols=33 Identities=21% Similarity=0.456 Sum_probs=25.5
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLAR 321 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLar 321 (410)
.|.|+.|+..|- +-|-.|+.|+..+.....|.+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 50 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRY 50 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHH
Confidence 588888887664 456789999999988888865
No 128
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=68.83 E-value=1 Score=45.04 Aligned_cols=53 Identities=19% Similarity=0.358 Sum_probs=0.0
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchh-------hhccCCCCCCCCC
Q 015267 342 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-------IHESLHNCPGCES 398 (410)
Q Consensus 342 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~f-------iHe~Lh~CPgC~~ 398 (410)
|.+......|..|..+|.-- ..++.|..|+.+||..|.-+ .+.....|-.|-.
T Consensus 369 w~~~~~~~~c~~c~~~f~~~----~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~ 428 (434)
T 3mpx_A 369 LVPVTHVMMCMNCGCDFSLT----LRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFG 428 (434)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCCcccCCcCCCcCCCCCCc----chhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHH
Confidence 33334456899999998522 23588999999999999843 2334677888865
No 129
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=68.67 E-value=5.1 Score=34.55 Aligned_cols=71 Identities=27% Similarity=0.420 Sum_probs=38.0
Q ss_pred CCCCC--CCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCC----------CCC
Q 015267 302 LPTDC--RICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSG----------NKP 365 (410)
Q Consensus 302 lP~~C--~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~--~C~~~~~~~~----------~~~ 365 (410)
-|-.| +.|+..+.+...|.+-. |+- . ....|. .|.+.|.... ...
T Consensus 41 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~ 101 (190)
T 1tf6_A 41 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG--E-----------------KNFTCDSDGCDLRFTTKANMKKHFNRFHNIK 101 (190)
T ss_dssp CSSCCSSTTCCCCCSSHHHHHHHHTTTTT--C-----------------CCEECCSSSCCCEESCHHHHHHHHHTTSSTT
T ss_pred CCccCCCCCCChhhCCHHHHHHHHHHccC--C-----------------CceeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence 35566 66777777766665531 110 0 122466 6766664321 012
Q ss_pred CceeeC--CCCCcccccccchhhhccCC
Q 015267 366 GLYVAC--PKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 366 ~~~~~C--~~C~~~FC~dCD~fiHe~Lh 391 (410)
...|.| +.|+..|=..=++-.|...|
T Consensus 102 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H 129 (190)
T 1tf6_A 102 ICVYVCHFENCGKAFKKHNQLKVHQFSH 129 (190)
T ss_dssp TSCCEECSSSSCEECSSHHHHHHHHGGG
T ss_pred cceeeCCCCCCccccCCHHHHHHHHHHh
Confidence 235777 66777776666666665443
No 130
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=68.16 E-value=1.7 Score=37.88 Aligned_cols=45 Identities=27% Similarity=0.575 Sum_probs=32.7
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc-CCCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLR 400 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~-Lh~CPgC~~~~ 400 (410)
..|.-|...|.. ......|++.||.+|=.-.-.. -..||-|-...
T Consensus 55 ~~C~IC~~~~~~-------p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 55 LMCPICLDMLKN-------TMTTKECLHRFCADCIITALRSGNKECPTCRKKL 100 (165)
T ss_dssp HBCTTTSSBCSS-------EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBC
T ss_pred CCCcccChHhhC-------cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcC
Confidence 379999877753 2456789999999996433333 56799998644
No 131
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=68.12 E-value=2.8 Score=32.86 Aligned_cols=34 Identities=29% Similarity=0.578 Sum_probs=28.7
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|+|++|+..|- +-|-.|+.|+..+.....|.|-
T Consensus 28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H 75 (85)
T 2lv2_A 28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH 75 (85)
T ss_dssp TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHH
T ss_pred CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHh
Confidence 699999998765 4567899999999999998775
No 132
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=68.10 E-value=3.3 Score=33.49 Aligned_cols=51 Identities=24% Similarity=0.565 Sum_probs=33.4
Q ss_pred CCccccccccccCCCC----------CCCceeeCCCCCcccccccchhhh-----ccCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGN----------KPGLYVACPKCKKHFCLECDIYIH-----ESLHNCPGCES 398 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~----------~~~~~~~C~~C~~~FC~dCD~fiH-----e~Lh~CPgC~~ 398 (410)
...|.-|+..|..+.. .......-..|++.||.+|=.-.- +.-..||-|-.
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 4589999988865421 011122356899999999954322 34569999975
No 133
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=67.94 E-value=1.8 Score=35.64 Aligned_cols=49 Identities=31% Similarity=0.586 Sum_probs=33.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchh-hhccCCCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-IHESLHNCPGCESLRHSN 403 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~f-iHe~Lh~CPgC~~~~~~~ 403 (410)
....|.-|...+..+ ... .|+..||.+|=.- +...-..||.|.......
T Consensus 17 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 17 SKYECPICLMALREA-------VQT-PCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp GGGBCTTTCSBCSSE-------EEC-TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCcCChhhcCe-------EEC-CcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 345899999777532 334 5999999999643 333334999997655443
No 134
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=67.93 E-value=9.9 Score=31.54 Aligned_cols=31 Identities=23% Similarity=0.421 Sum_probs=18.9
Q ss_pred CCccccccc--------cccCCCCCCCceeeCCCCCccc
Q 015267 348 RSTCFGCQQ--------SLLSSGNKPGLYVACPKCKKHF 378 (410)
Q Consensus 348 ~~~C~~C~~--------~~~~~~~~~~~~~~C~~C~~~F 378 (410)
...|..|.. +.-+.+......|.|.+|++.+
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w 110 (113)
T 3h0g_I 72 DKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAF 110 (113)
T ss_dssp CSCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCC
T ss_pred ccCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEE
Confidence 357888842 2222223455679999998754
No 135
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=67.90 E-value=3.9 Score=34.54 Aligned_cols=31 Identities=19% Similarity=0.489 Sum_probs=18.8
Q ss_pred CCcccccccc--------ccCCCCCCCceeeCCCCCccc
Q 015267 348 RSTCFGCQQS--------LLSSGNKPGLYVACPKCKKHF 378 (410)
Q Consensus 348 ~~~C~~C~~~--------~~~~~~~~~~~~~C~~C~~~F 378 (410)
...|..|... .-+.+......|.|.+|++.+
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~~t~fy~C~~C~~~w 110 (122)
T 1twf_I 72 DRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIF 110 (122)
T ss_dssp CCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEE
T ss_pred CCCCCCCCCCEEEEEEecCccCCCCceEEEEeCCCCCEe
Confidence 4579888422 222223345679999998754
No 136
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=67.74 E-value=2.9 Score=30.48 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=27.3
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|++|+-.|- +-|-.|+.||..+....+|.+-
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H 51 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRH 51 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHH
T ss_pred CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHH
Confidence 588888888665 4567899999999998888763
No 137
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=67.33 E-value=2 Score=34.93 Aligned_cols=45 Identities=20% Similarity=0.469 Sum_probs=31.1
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccch-hhhccCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHESLHNCPGCESLR 400 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-fiHe~Lh~CPgC~~~~ 400 (410)
...|.-|...|..+ +. -.|++.||.+|=. ++...-..||.|-...
T Consensus 15 ~~~C~iC~~~~~~p------~~--~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 15 ECQCGICMEILVEP------VT--LPCNHTLCKPCFQSTVEKASLCCPFCRRRV 60 (115)
T ss_dssp HHBCTTTCSBCSSC------EE--CTTSCEECHHHHCCCCCTTTSBCTTTCCBC
T ss_pred CCCCccCCcccCce------eE--cCCCCHHhHHHHHHHHhHCcCCCCCCCccc
Confidence 34799999777543 11 2699999999943 3333357899997643
No 138
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=66.59 E-value=0.69 Score=39.09 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=50.5
Q ss_pred cCCCCCCCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCceeeC
Q 015267 301 ELPTDCRICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVAC 371 (410)
Q Consensus 301 ~lP~~C~~Cgl~LvssphLarsyh-HlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C 371 (410)
+-|=.|++||..+.+...|.+-.- |. .. ..-.|.-|.+.|..... .....|.|
T Consensus 20 ek~y~C~~C~k~F~~~~~L~~H~~~H~-~~-----------------k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C 81 (133)
T 2lt7_A 20 RVYYICIVCKRSYVCLTSLRRHFNIHS-WE-----------------KKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQC 81 (133)
T ss_dssp EEEEEETTTCCEESCHHHHHHHHHHHH-CC-----------------SCEECSSSSCEESSHHHHHHHHHHHHTCCCEEE
T ss_pred CcCeECCCCCCCcCCHHHHHHHHHHcC-CC-----------------CCeeCCccCeecccccchhhhccccCCCccccC
Confidence 345579999999999998876422 31 01 12358899988875420 01235999
Q ss_pred CCCCcccccccchhhhccCC
Q 015267 372 PKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 372 ~~C~~~FC~dCD~fiHe~Lh 391 (410)
+.|+..|-..-++-.|...|
T Consensus 82 ~~C~k~F~~~~~L~~H~~~h 101 (133)
T 2lt7_A 82 LACGKSFINYQFMSSHIKSV 101 (133)
T ss_dssp SSSCCEESSHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHhHHh
Confidence 99999999999988886543
No 139
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=66.44 E-value=2.4 Score=31.64 Aligned_cols=69 Identities=25% Similarity=0.460 Sum_probs=42.3
Q ss_pred CCCC--CCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCceeeC
Q 015267 305 DCRI--CGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLYVAC 371 (410)
Q Consensus 305 ~C~~--Cgl~LvssphLarsyh-HlfPl~~f~~v~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~~~C 371 (410)
.|+. |+..+.+...|.+-.- |. .. ....|. .|.+.|..... .....|.|
T Consensus 7 ~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C 68 (89)
T 2wbs_A 7 TCDYAGCGKTYTKSSHLKAHLRTHT-GE-----------------KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68 (89)
T ss_dssp ECCSTTTCCEESSHHHHHHHHTTSC-SS-----------------CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred eCCCCCCCCcCCCHHHHHHHHHhcC-CC-----------------CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC
Confidence 3555 8888888888765321 11 00 123575 68887764320 01235999
Q ss_pred CCCCcccccccchhhhccCC
Q 015267 372 PKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 372 ~~C~~~FC~dCD~fiHe~Lh 391 (410)
+.|+..|=..=++-.|...|
T Consensus 69 ~~C~~~f~~~~~l~~H~~~H 88 (89)
T 2wbs_A 69 QKCDRAFSRSDHLALHMKRH 88 (89)
T ss_dssp SSSSCEESSHHHHHHHGGGG
T ss_pred CCCCcccCCHHHHHHHHHhh
Confidence 99999987776666666554
No 140
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=65.41 E-value=2.6 Score=36.92 Aligned_cols=26 Identities=31% Similarity=0.775 Sum_probs=22.2
Q ss_pred eeEcCCCCcccccCCC--CCCCCCceec
Q 015267 289 GYTCPRCKARVCELPT--DCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~--~C~~Cgl~Lv 314 (410)
-|.|+-|+.+|=..+. .||.||-.+.
T Consensus 132 ~y~C~~Cg~~~~~~~~~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 132 RYVCIGCGRKFSTLPPGGVCPDCGSKVK 159 (165)
T ss_dssp CEEESSSCCEESSCCGGGBCTTTCCBEE
T ss_pred EEECCCCCCcccCCCCCCcCCCCCCcce
Confidence 7999999999986665 8999998754
No 141
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.35 E-value=6.2 Score=29.97 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=33.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc---CCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES---LHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~---Lh~CPgC~~~~ 400 (410)
....|.-|...|.... .....- .|++.||.+|=.-.-+. -..||.|....
T Consensus 14 ~~~~C~IC~~~~~~~~---~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 14 EVLECPICMESFTEEQ---LRPKLL-HCGHTICRQCLEKLLASSINGVRCPFCSKIT 66 (88)
T ss_dssp SCCBCTTTCCBCCTTS---SCEEEC-SSSCEEEHHHHHHHHHHCSSCBCCTTTCCCB
T ss_pred CCCCCccCCccccccC---CCeEEC-CCCChhhHHHHHHHHHcCCCCcCCCCCCCcc
Confidence 4568999998875421 112223 69999999996544333 37899998643
No 142
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=64.05 E-value=9.8 Score=30.30 Aligned_cols=58 Identities=17% Similarity=0.133 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCC---CCcccHHHHHHHHHHcCeEEEEEEcchh
Q 015267 155 SLQNALDLVQGLLSQIPSYGHREVLILYSALST---CDPGDIMETIQKCKESKIRCSVIGLSAE 215 (410)
Q Consensus 155 SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t---~DpgdI~~ti~~akk~~IrV~vIgL~aE 215 (410)
.+.++|..|.+.++..| .-+|-|++-++.. ....++.+.++.|++.||++.+|+-+.+
T Consensus 12 ~~~~al~~~~n~~~~~~---~~~v~vv~~g~gv~~~~~~~~~~~~i~~l~~~gV~~~~C~~s~~ 72 (108)
T 2pd2_A 12 KVPQALRSVINLYNDIK---DAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCENSIR 72 (108)
T ss_dssp GHHHHHHHHHHHHHHST---TCEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHhhCC---CCeEEEEEcChHHHHHHcCchHHHHHHHHHHCcCEEEecHHHHH
Confidence 56678888888888744 3467777654443 2234688999999999999999988644
No 143
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=64.02 E-value=3.9 Score=31.54 Aligned_cols=24 Identities=25% Similarity=0.816 Sum_probs=20.2
Q ss_pred eeEcCCCCcccccC---CCCCCCCCce
Q 015267 289 GYTCPRCKARVCEL---PTDCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~l---P~~C~~Cgl~ 312 (410)
-|+|+.|+..+-.. ++.|+-||--
T Consensus 28 ~Y~C~~CG~~~e~~~~d~irCp~CG~R 54 (70)
T 1twf_L 28 KYICAECSSKLSLSRTDAVRCKDCGHR 54 (70)
T ss_dssp CEECSSSCCEECCCTTSTTCCSSSCCC
T ss_pred EEECCCCCCcceeCCCCCccCCCCCce
Confidence 79999999997655 4689999983
No 144
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=63.40 E-value=3.3 Score=26.98 Aligned_cols=25 Identities=28% Similarity=0.721 Sum_probs=21.1
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRSHT 36 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGGSS
T ss_pred ceECCCCCchhCCHHHHHHHHHHhC
Confidence 5889999999999888888877763
No 145
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=63.00 E-value=9.8 Score=29.26 Aligned_cols=34 Identities=26% Similarity=0.586 Sum_probs=26.8
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-
T Consensus 17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 64 (106)
T 2ee8_A 17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64 (106)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHH
Confidence 688988887653 3567899999999888888764
No 146
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=62.86 E-value=2.6 Score=33.47 Aligned_cols=33 Identities=21% Similarity=0.460 Sum_probs=24.1
Q ss_pred eccCccccC-eeEcCCCCcccccCCCCCCCCCcee
Q 015267 280 CHKEVKVGV-GYTCPRCKARVCELPTDCRICGLQL 313 (410)
Q Consensus 280 CH~~~~~~~-GY~Cp~C~s~~C~lP~~C~~Cgl~L 313 (410)
|+..+...+ .|.|+.|.+-|=..+ .||-||..|
T Consensus 8 C~~~l~~~~~~~~C~~C~~~~~~~a-fCPeCgq~L 41 (81)
T 2jrp_A 8 CHHALERNGDTAHCETCAKDFSLQA-LCPDCRQPL 41 (81)
T ss_dssp SCSCCEECSSEEECTTTCCEEEEEE-ECSSSCSCC
T ss_pred CCCccccCCCceECccccccCCCcc-cCcchhhHH
Confidence 565555443 445999999887777 999999764
No 147
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=62.77 E-value=5.1 Score=31.29 Aligned_cols=39 Identities=28% Similarity=0.631 Sum_probs=27.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
....|+.|.+.+.- ..|.|. |+..||..=- +-.-|+|++
T Consensus 24 ~~nRC~~CrKkvgL------~gf~Cr-Cg~~FCs~HR---y~e~H~C~f 62 (74)
T 1wfl_A 24 KKNRCFMCRKKVGL------TGFDCR-CGNLFCGLHR---YSDKHNCPY 62 (74)
T ss_dssp CTTBCSSSCCBCGG------GCEECT-TSCEECSSSC---STTTTTCCC
T ss_pred cCCcChhhCCcccc------cCeecC-CCCEechhcC---CCccCCCcc
Confidence 34589999977542 259999 9999997532 234677765
No 148
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=62.56 E-value=4.9 Score=29.11 Aligned_cols=55 Identities=18% Similarity=0.446 Sum_probs=35.3
Q ss_pred CCccccccc-cccCCCCCCCceeeCCCCCcccccccchhh-hccCCCCCCCCCCCCCCCcc
Q 015267 348 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKKHFCLECDIYI-HESLHNCPGCESLRHSNPIV 406 (410)
Q Consensus 348 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~~FC~dCD~fi-He~Lh~CPgC~~~~~~~~~~ 406 (410)
...|.-|.. .+..+. ....=..|++.||.+|-.-. ...-..||-|........|.
T Consensus 3 ~~~C~IC~~~~~~~~~----~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~ 59 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPS----LKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59 (65)
T ss_dssp TTCCSTTTTHHHHCSS----CCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCE
T ss_pred CCcCCcCCCCccCCCc----cCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccce
Confidence 346999987 564331 11112479999999996443 34446799998766555543
No 149
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=61.98 E-value=5.4 Score=31.03 Aligned_cols=43 Identities=33% Similarity=0.641 Sum_probs=31.6
Q ss_pred CCcccc--ccccccCCCCCCCceeeCC-----CCCcccccccchhhhccCCCCC
Q 015267 348 RSTCFG--CQQSLLSSGNKPGLYVACP-----KCKKHFCLECDIYIHESLHNCP 394 (410)
Q Consensus 348 ~~~C~~--C~~~~~~~~~~~~~~~~C~-----~C~~~FC~dCD~fiHe~Lh~CP 394 (410)
-.+|-+ |...+...+ ....-.|+ .|+..||..|-.--|+ ..|.
T Consensus 25 ~~~CP~p~C~~~v~~~~--~~~~v~C~~~~~~~C~~~FC~~C~~~wH~--~~C~ 74 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEP--DQRKVTCEGGNGLGCGFAFCRECKEAYHE--GECS 74 (80)
T ss_dssp SCCCCSSSCCCCCCCCS--CTTSBCTTSSSTTCCSCCEETTTTEECCS--SCSS
T ss_pred cEECCCCCCCcccEECC--CCCcCCCCCCCCCCCCCeeccccCccccC--Cccc
Confidence 567887 987775432 22346798 9999999999988887 5553
No 150
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.78 E-value=6.8 Score=30.02 Aligned_cols=54 Identities=19% Similarity=0.376 Sum_probs=35.1
Q ss_pred CCCccccccccccCCC-------CCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSG-------NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~-------~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~ 400 (410)
....|.-|+..|...- ........-+.|++.|+.+|=.---+.-..||-|-...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~ 74 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDW 74 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBC
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCc
Confidence 3557999988885420 01122345568999999999543334446999997643
No 151
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=61.30 E-value=2.7 Score=24.18 Aligned_cols=25 Identities=36% Similarity=0.700 Sum_probs=20.9
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-++-.|...|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHILLHE 26 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHTGGG
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 3889999999998888888877663
No 152
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.25 E-value=2.1 Score=30.58 Aligned_cols=10 Identities=20% Similarity=0.687 Sum_probs=5.2
Q ss_pred eeEcCCCCcc
Q 015267 289 GYTCPRCKAR 298 (410)
Q Consensus 289 GY~Cp~C~s~ 298 (410)
-|.|+.|+..
T Consensus 18 ~~~C~~C~k~ 27 (73)
T 2ctu_A 18 SQKCSKCGII 27 (73)
T ss_dssp EEECSSSCCE
T ss_pred CeeCCcccch
Confidence 4666655433
No 153
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=61.15 E-value=2.8 Score=24.02 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=21.5
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-.+-.|...|.
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~h~ 27 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLETHD 27 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHTTC
T ss_pred CccCCCCCcccCCHHHHHHHHHHhc
Confidence 4899999999998888888887764
No 154
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=65.20 E-value=1.8 Score=24.63 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=19.4
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|+..|-..-++-.|...|
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~~H 25 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIRHH 25 (26)
Confidence 378999999998888887787665
No 155
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=60.95 E-value=1.7 Score=24.83 Aligned_cols=24 Identities=29% Similarity=0.616 Sum_probs=19.3
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|+..|...-.+-.|...|
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h 25 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLKIH 25 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHHh
Confidence 378999999999888877776554
No 156
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=60.92 E-value=3.3 Score=23.36 Aligned_cols=24 Identities=21% Similarity=0.574 Sum_probs=20.0
Q ss_pred eeCCCCCcccccccchhhhccCCC
Q 015267 369 VACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 369 ~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
|.|+.|++.|-..-.+-.|...|.
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~h~ 25 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRVHK 25 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred ccCCCCCCcCCCHHHHHHHHHHcC
Confidence 789999999988888888877663
No 157
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=60.90 E-value=4.3 Score=27.59 Aligned_cols=20 Identities=20% Similarity=0.624 Sum_probs=14.3
Q ss_pred CCCCCCCCCceecCchhHHh
Q 015267 302 LPTDCRICGLQLVSSPHLAR 321 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLar 321 (410)
-|-.|+.|+..+.....|.+
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~ 47 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKGNLTK 47 (57)
T ss_dssp CCEECSSSSCEESSHHHHHH
T ss_pred CCccCCCCCchhcCHHHHHH
Confidence 35567788888877777765
No 158
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=60.57 E-value=1.2 Score=35.22 Aligned_cols=77 Identities=22% Similarity=0.486 Sum_probs=50.4
Q ss_pred CCCCCC--CCceecCchhHHhh--hcccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCce
Q 015267 303 PTDCRI--CGLQLVSSPHLARS--YHHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLY 368 (410)
Q Consensus 303 P~~C~~--Cgl~LvssphLars--yhHlfPl~~f~~v~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~ 368 (410)
|-.|+. |+..+.+...|.+- .|+- - ....|. .|.+.|..... .....
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~ 66 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTG--E-----------------KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHHHHT--T-----------------CCEECCSTTCCCEESSHHHHHHHHHHHHCCCC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHhhCC--C-----------------CCccCCCCCCcCccCCHHHHHHHHHHcCCCCC
Confidence 345655 88888887777653 2321 1 123577 78888864320 01235
Q ss_pred eeCCCCCcccccccchhhhccCC------CC--CCCCC
Q 015267 369 VACPKCKKHFCLECDIYIHESLH------NC--PGCES 398 (410)
Q Consensus 369 ~~C~~C~~~FC~dCD~fiHe~Lh------~C--PgC~~ 398 (410)
|.|+.|+..|=..=++-.|...| .| |.|..
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~ 104 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQK 104 (119)
T ss_dssp EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCC
T ss_pred ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCcc
Confidence 99999999999888888776554 58 88864
No 159
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.06 E-value=5.3 Score=30.04 Aligned_cols=42 Identities=21% Similarity=0.537 Sum_probs=30.3
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhccCCCCCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRHS 402 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~fiHe~Lh~CPgC~~~~~~ 402 (410)
..|.-|...+..+ + =-.|++. ||.+|- +.+..||.|......
T Consensus 26 ~~C~IC~~~~~~~------~--~~pCgH~~~C~~C~----~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 26 KLCKICMDRNIAI------V--FVPCGHLVTCKQCA----EAVDKCPMCYTVITF 68 (75)
T ss_dssp HSCSSSCSSCCCB------C--CSSSCCCCBCHHHH----HHCSBCTTTCCBCCC
T ss_pred CCCCcCCCCCCCE------E--EecCCCHHHHHHHh----hCCCCCccCCceecC
Confidence 4699998666432 1 2368999 999997 467999999875443
No 160
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.03 E-value=1.9 Score=33.67 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=31.5
Q ss_pred eeEcCCCCcccc----------------cCCCCCCCCCceecCchhHHhh--hcc
Q 015267 289 GYTCPRCKARVC----------------ELPTDCRICGLQLVSSPHLARS--YHH 325 (410)
Q Consensus 289 GY~Cp~C~s~~C----------------~lP~~C~~Cgl~LvssphLars--yhH 325 (410)
-|.|+.|...|- +-|-.|++|+..+....+|.+- .||
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~ 78 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence 799999999887 4567999999999999999875 455
No 161
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=59.81 E-value=11 Score=32.79 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=32.8
Q ss_pred eEEEEEeCCCCCCcccHHHHHHHHHHc-CeEEEEEEcchh-HHHHHHHHH
Q 015267 177 EVLILYSALSTCDPGDIMETIQKCKES-KIRCSVIGLSAE-MFICKHLCQ 224 (410)
Q Consensus 177 eILVi~~S~~t~DpgdI~~ti~~akk~-~IrV~vIgL~aE-~~iLk~la~ 224 (410)
..+||+|++ +|+..+++.+++. |++|.++|...- ..-|+..|+
T Consensus 110 d~~vLvSgD-----~DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad 154 (165)
T 2qip_A 110 DRVILVSGD-----GDFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCAD 154 (165)
T ss_dssp SEEEEECCC-----GGGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSS
T ss_pred CEEEEEECC-----hhHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCC
Confidence 467777755 4889999999996 999999998542 356677765
No 162
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.80 E-value=5.4 Score=28.82 Aligned_cols=34 Identities=26% Similarity=0.582 Sum_probs=27.5
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 61 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHH
Confidence 699999987654 4567899999999988888763
No 163
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.58 E-value=7.3 Score=28.39 Aligned_cols=34 Identities=29% Similarity=0.722 Sum_probs=27.6
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+.|...|- +-|-.|+.|+..+....+|.+-
T Consensus 18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 65 (77)
T 2cot_A 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65 (77)
T ss_dssp SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHH
T ss_pred CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHH
Confidence 689999987664 3466899999999999988764
No 164
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.69 E-value=4.1 Score=31.21 Aligned_cols=40 Identities=33% Similarity=0.649 Sum_probs=27.5
Q ss_pred CCCccccccccccCCCCCCCc--eeeCCCCCcccccccchhhhccCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGL--YVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~--~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
....|+.|.+.+.-. . .|.| .|+..||.. --|-.-|+|++
T Consensus 14 ~~~rC~~C~kk~gL~-----~~egf~C-rCg~~FC~~---HRy~e~H~C~f 55 (67)
T 1x4w_A 14 SRRRCFQCQTKLELV-----QQELGSC-RCGYVFCML---HRLPEQHDCTF 55 (67)
T ss_dssp CTTBCSSSCCBCCHH-----HHHHHCC-SSSCCCCTT---TCSTGGGTCSS
T ss_pred cCCcchhhCCeeccc-----ccCceEe-cCCCEehhc---cCCccccCCcc
Confidence 456899998776411 1 2899 999999974 33445677765
No 165
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=58.67 E-value=6.9 Score=30.11 Aligned_cols=28 Identities=21% Similarity=0.657 Sum_probs=21.9
Q ss_pred CceeeCCCCCcccccccchhhhccCCCCCCCCC
Q 015267 366 GLYVACPKCKKHFCLECDIYIHESLHNCPGCES 398 (410)
Q Consensus 366 ~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~ 398 (410)
...|.|+.|+..|=++ ..+.+ .||-|..
T Consensus 26 ~v~Y~C~~CG~~~e~~----~~d~i-rCp~CG~ 53 (70)
T 1twf_L 26 TLKYICAECSSKLSLS----RTDAV-RCKDCGH 53 (70)
T ss_dssp CCCEECSSSCCEECCC----TTSTT-CCSSSCC
T ss_pred eEEEECCCCCCcceeC----CCCCc-cCCCCCc
Confidence 3579999999999776 44556 5999987
No 166
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.60 E-value=6.7 Score=30.80 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=29.5
Q ss_pred eeEcCCCCccc-c-------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARV-C-------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~-C-------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|++|+..| - +-|-.|..||..+....+|.+-
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHH
T ss_pred CcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHH
Confidence 69999999988 2 4578999999999999999765
No 167
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=58.35 E-value=3.9 Score=23.36 Aligned_cols=25 Identities=28% Similarity=0.584 Sum_probs=20.6
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~h~ 27 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRVHT 27 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred CccCCCCCcccCCHHHHHHHHHhcC
Confidence 4899999999988888888877663
No 168
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.00 E-value=3.8 Score=26.66 Aligned_cols=24 Identities=29% Similarity=0.818 Sum_probs=19.5
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRTH 35 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHHC
T ss_pred CeeCCCCCCccCCHHHHHHHHHHh
Confidence 488999999998888888886655
No 169
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.68 E-value=4.6 Score=26.32 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=19.6
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGGTS
T ss_pred CeECCCCCCeeCCHHHHHHHhhhcC
Confidence 4888888888888888888876663
No 170
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.64 E-value=5.7 Score=31.15 Aligned_cols=46 Identities=30% Similarity=0.585 Sum_probs=34.1
Q ss_pred CCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCC
Q 015267 345 NRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNC 393 (410)
Q Consensus 345 ~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~C 393 (410)
..+.+.|.-|+.+|.--.+. .-.|+.|+...|-+|-+|.-...--|
T Consensus 22 ~~~~r~CarC~~~LG~l~~~---g~~C~~Ck~rVC~~Crv~~~~~~W~C 67 (76)
T 2csz_A 22 HYSDRTCARCQESLGRLSPK---TNTCRGCNHLVCRDCRIQESNGTWRC 67 (76)
T ss_dssp TCCCCBCSSSCCBCSSSCTT---TSEETTTTEECCTTSEEECSTTCEEE
T ss_pred CCCccchhhhCccccccccC---CCcCcccChhhcccccccCCCCCEEE
Confidence 34678999999999654322 35699999999999999974444434
No 171
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=56.88 E-value=5.5 Score=33.12 Aligned_cols=29 Identities=21% Similarity=0.625 Sum_probs=25.3
Q ss_pred eeEcCCCCcccc---cCCCCCCCCCceecCch
Q 015267 289 GYTCPRCKARVC---ELPTDCRICGLQLVSSP 317 (410)
Q Consensus 289 GY~Cp~C~s~~C---~lP~~C~~Cgl~Lvssp 317 (410)
-|.|-.|+-.|+ ..|+.||.|+-.-|..|
T Consensus 67 p~~C~~CG~~F~~~~~kPsrCP~CkSe~Ie~P 98 (105)
T 2gmg_A 67 PAQCRKCGFVFKAEINIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp CCBBTTTCCBCCCCSSCCSSCSSSCCCCBCCC
T ss_pred CcChhhCcCeecccCCCCCCCcCCCCCccCCc
Confidence 688999999997 67899999999888766
No 172
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=56.87 E-value=4 Score=26.66 Aligned_cols=24 Identities=21% Similarity=0.591 Sum_probs=18.6
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNVH 35 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 478888888888888877776655
No 173
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=56.66 E-value=17 Score=28.89 Aligned_cols=64 Identities=16% Similarity=0.176 Sum_probs=43.4
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCC--C----Cc---ccHHHHHHHHHHcCeEEEEEEcchhH
Q 015267 150 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALST--C----DP---GDIMETIQKCKESKIRCSVIGLSAEM 216 (410)
Q Consensus 150 ~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t--~----Dp---gdI~~ti~~akk~~IrV~vIgL~aE~ 216 (410)
|.|.....+||.+|...+.. ++..+|-||+..+.. . .| .++.+.++.+.+.||+|++++.+.+.
T Consensus 12 p~~~~~~~~al~~a~~~~~~---~g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C~~~l~~ 84 (117)
T 1jx7_A 12 PYGSESLFNSLRLAIALREQ---ESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDG 84 (117)
T ss_dssp TTTCSHHHHHHHHHHHHHHH---CTTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEEHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhc---CCCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEeHHHHHH
Confidence 44556777899999988865 233256666543332 1 11 36778899999999999999887654
No 174
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=56.36 E-value=5 Score=29.09 Aligned_cols=34 Identities=38% Similarity=0.803 Sum_probs=27.1
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
.|.|+.|...|- +-|-.|+.|+..+....+|.+-
T Consensus 17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H 64 (74)
T 2lce_A 17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64 (74)
T ss_dssp SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHH
T ss_pred CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHH
Confidence 689999987663 3466899999999998888764
No 175
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.35 E-value=5 Score=26.08 Aligned_cols=24 Identities=25% Similarity=0.730 Sum_probs=19.0
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRIH 35 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred CeeCCCCCchhCCHHHHHHHHHHc
Confidence 488888888888888888886655
No 176
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=55.69 E-value=2.9 Score=29.50 Aligned_cols=25 Identities=28% Similarity=0.745 Sum_probs=17.1
Q ss_pred eeEcCCCCc-ccccCC----CCCCCCCcee
Q 015267 289 GYTCPRCKA-RVCELP----TDCRICGLQL 313 (410)
Q Consensus 289 GY~Cp~C~s-~~C~lP----~~C~~Cgl~L 313 (410)
-+.||.|++ .+-.-+ ..|+.||+.+
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~CG~v~ 34 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAKCGYVI 34 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred cEeCcCCCCcceEEcCCCCeEECcccCCcc
Confidence 578999987 332222 4899999865
No 177
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=55.49 E-value=6.2 Score=29.56 Aligned_cols=25 Identities=32% Similarity=0.701 Sum_probs=19.9
Q ss_pred eEcCCCCcccccCCCCCCCCCceecCc
Q 015267 290 YTCPRCKARVCELPTDCRICGLQLVSS 316 (410)
Q Consensus 290 Y~Cp~C~s~~C~lP~~C~~Cgl~Lvss 316 (410)
-.||+|+.. .|--.||.||....++
T Consensus 7 r~C~~CgvY--TLk~~CP~CG~~T~~~ 31 (60)
T 2apo_B 7 KKCPKCGLY--TLKEICPKCGEKTVIP 31 (60)
T ss_dssp EECTTTCCE--ESSSBCSSSCSBCBCC
T ss_pred eeCCCCCCE--eccccCcCCCCcCCCC
Confidence 579999776 4577899999887654
No 178
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=55.47 E-value=3.7 Score=26.80 Aligned_cols=24 Identities=25% Similarity=0.591 Sum_probs=19.8
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKIH 35 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTGG
T ss_pred CcCCCCCcchhCCHHHHHHHHHhc
Confidence 588999999998888888886665
No 179
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=55.31 E-value=4 Score=35.51 Aligned_cols=48 Identities=27% Similarity=0.497 Sum_probs=34.0
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhc-cCCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 402 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe-~Lh~CPgC~~~~~~ 402 (410)
....|.-|...|..+ +++ .|+..||.+|=.-.-+ .-..||.|......
T Consensus 17 ~~~~C~IC~~~~~~p-------v~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 17 SKYECPICLMALREA-------VQT-PCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp GGGBCTTTCSBCSSE-------EEC-TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCChhhcCc-------EEC-CCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 355899999877532 555 5999999999654433 33499999765444
No 180
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.27 E-value=6.7 Score=28.60 Aligned_cols=39 Identities=23% Similarity=0.462 Sum_probs=31.3
Q ss_pred eeEcCCCCcccc-----------------cCCCCCCCCCceecCchhHHhhh--cccC
Q 015267 289 GYTCPRCKARVC-----------------ELPTDCRICGLQLVSSPHLARSY--HHLF 327 (410)
Q Consensus 289 GY~Cp~C~s~~C-----------------~lP~~C~~Cgl~LvssphLarsy--hHlf 327 (410)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-. ||--
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~ 64 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 699999987663 46789999999999999998754 5543
No 181
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=55.17 E-value=2.9 Score=31.84 Aligned_cols=66 Identities=21% Similarity=0.347 Sum_probs=40.3
Q ss_pred CCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCceeeCCCC
Q 015267 307 RICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLYVACPKC 374 (410)
Q Consensus 307 ~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~~~C~~C 374 (410)
+.|+..+....+|.+-. |+- . ....|. .|.+.|..... .....|.|+.|
T Consensus 21 ~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 81 (100)
T 2ebt_A 21 PGCTKVYTKSSHLKAHLRTHTG--E-----------------KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81 (100)
T ss_dssp SSCCCEESCHHHHHHHHHHHSC--C-----------------CCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSS
T ss_pred CCCCCcccCHHHHHHHHHHhCC--C-----------------CCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCC
Confidence 34888888877776532 221 1 123464 68777754310 11235899999
Q ss_pred CcccccccchhhhccCC
Q 015267 375 KKHFCLECDIYIHESLH 391 (410)
Q Consensus 375 ~~~FC~dCD~fiHe~Lh 391 (410)
+..|=..-++..|...|
T Consensus 82 ~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 82 NRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CCBCSSHHHHHHHHHHH
T ss_pred cCccCCHHHHHHHHHHh
Confidence 99998777777775544
No 182
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=55.09 E-value=6.8 Score=33.85 Aligned_cols=47 Identities=23% Similarity=0.599 Sum_probs=31.8
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhcc-CCCCCCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLRHSN 403 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~-Lh~CPgC~~~~~~~ 403 (410)
..|.-|...|..+ .. ..|+..||..|=.-.-+. -..||-|-......
T Consensus 79 ~~C~IC~~~~~~p-------v~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQP-------VT-TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSSE-------EE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CEeecCChhhcCC-------EE-cCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 4799998777543 22 479999999995433332 34799998755443
No 183
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.97 E-value=5.2 Score=26.05 Aligned_cols=24 Identities=21% Similarity=0.527 Sum_probs=19.2
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRVH 35 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 488888888888888888776665
No 184
>1l1s_A Hypothetical protein MTH1491; structural genomics, PSI, protein STRU initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.114.1.1
Probab=54.76 E-value=17 Score=29.34 Aligned_cols=57 Identities=5% Similarity=0.109 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCC---CCcccHHHHHHHHHHcCeEEEEEEcch
Q 015267 155 SLQNALDLVQGLLSQIPSYGHREVLILYSALST---CDPGDIMETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 155 SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t---~DpgdI~~ti~~akk~~IrV~vIgL~a 214 (410)
.+.++|..|.+.++..| .-+|.|++-++.. .+..++.+.++.|++.||++.+|+-+.
T Consensus 17 ~~~~~L~~a~n~~~~~~---~~~i~vv~~G~av~~~~~~~~~~~~i~~L~~~gV~~~~C~~~l 76 (113)
T 1l1s_A 17 RVLLLISNVRNLMADLE---SVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACSNTL 76 (113)
T ss_dssp HHHHHHHHHHHHHHHCS---SEEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHHhCC---CCcEEEEEechHHHHHHcCChHHHHHHHHHHCCCEEEecHHHH
Confidence 56778888888888754 2456555533332 244567789999999999999998764
No 185
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=54.71 E-value=7.4 Score=35.81 Aligned_cols=53 Identities=8% Similarity=-0.118 Sum_probs=34.5
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccch-hhhccCCCCCCCCCCCCCCCcccC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHESLHNCPGCESLRHSNPIVAN 408 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-fiHe~Lh~CPgC~~~~~~~~~~~~ 408 (410)
.-.|.-|...|.+| . ...|++.||..|=. ++.+.-..||.|........++.|
T Consensus 208 ~~~c~i~~~~~~dP-------v-~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n 261 (281)
T 2c2l_A 208 YLCGKISFELMREP-------C-ITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPN 261 (281)
T ss_dssp TTBCTTTCSBCSSE-------E-ECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEEC
T ss_pred ccCCcCcCCHhcCC-------e-ECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCccc
Confidence 45799998777654 2 34599999999943 333334459999875554444433
No 186
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=54.57 E-value=7.2 Score=27.85 Aligned_cols=34 Identities=18% Similarity=0.555 Sum_probs=26.9
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+.|...|- +-|-.|+.|+..+...-.|.+-
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H 56 (70)
T 1x5w_A 9 PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHH
Confidence 689999987653 3456899999999988888664
No 187
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.46 E-value=5.7 Score=25.87 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=20.3
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLIHT 36 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTTTC
T ss_pred CeECCCCCchhCCHHHHHHHHHHcC
Confidence 5889999999988888888876663
No 188
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=59.04 E-value=2.7 Score=24.29 Aligned_cols=25 Identities=20% Similarity=0.466 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-++-.|...|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~h~ 27 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRIHT 27 (30)
Confidence 4889999999988888888876663
No 189
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.81 E-value=4.5 Score=26.44 Aligned_cols=24 Identities=21% Similarity=0.544 Sum_probs=18.7
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRVH 35 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGGG
T ss_pred CeeCcccCchhCCHHHHHHHHHhc
Confidence 488888888888888877776655
No 190
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.60 E-value=6.2 Score=25.74 Aligned_cols=24 Identities=25% Similarity=0.656 Sum_probs=19.9
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTT
T ss_pred CeECCcCCCccCCHHHHHHHHHHh
Confidence 588999999998888888887665
No 191
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=53.57 E-value=5.2 Score=26.12 Aligned_cols=24 Identities=25% Similarity=0.678 Sum_probs=20.1
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRMH 35 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 589999999999888888887665
No 192
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.56 E-value=5.8 Score=25.82 Aligned_cols=24 Identities=25% Similarity=0.499 Sum_probs=18.7
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRIH 35 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTTT
T ss_pred CeECCCCCceeCCHHHHHHHHHHh
Confidence 478888888888887877776665
No 193
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=58.50 E-value=2.8 Score=24.24 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-++-.|...|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVRQHT 26 (29)
Confidence 3789999999988888888876663
No 194
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.11 E-value=6.5 Score=25.55 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTTC
T ss_pred CeECCCCCchhCChHHHHHHHhhcC
Confidence 5889999999988888888876663
No 195
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=52.83 E-value=5.7 Score=22.83 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=20.1
Q ss_pred eeCCCCCcccccccchhhh-ccCCC
Q 015267 369 VACPKCKKHFCLECDIYIH-ESLHN 392 (410)
Q Consensus 369 ~~C~~C~~~FC~dCD~fiH-e~Lh~ 392 (410)
|.|+.|+..|-..-.+..| ...|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred cCCcccCcccCChHHHHHHHHHHcc
Confidence 7899999999988888888 66663
No 196
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.62 E-value=6.5 Score=25.63 Aligned_cols=24 Identities=29% Similarity=0.560 Sum_probs=19.3
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRTH 35 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTTT
T ss_pred CcCCCccChhhCChHHHHHHHHHh
Confidence 488888888888888888887665
No 197
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=52.52 E-value=4.9 Score=28.61 Aligned_cols=28 Identities=18% Similarity=0.611 Sum_probs=19.3
Q ss_pred eeEcCCCCcccc-----------cCCCCCCCCCceecCc
Q 015267 289 GYTCPRCKARVC-----------ELPTDCRICGLQLVSS 316 (410)
Q Consensus 289 GY~Cp~C~s~~C-----------~lP~~C~~Cgl~Lvss 316 (410)
.|.|+.|+..|- +-|-.|+.||..+...
T Consensus 14 ~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~ 52 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEED 52 (62)
T ss_dssp EEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEEC
T ss_pred CccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccC
Confidence 689998887543 3456788888776543
No 198
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.48 E-value=6.6 Score=25.52 Aligned_cols=24 Identities=25% Similarity=0.618 Sum_probs=20.6
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTT
T ss_pred CeeCcccCcccCChHHHHHHHHHh
Confidence 589999999999888888887766
No 199
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=52.40 E-value=4.2 Score=23.33 Aligned_cols=24 Identities=21% Similarity=0.310 Sum_probs=19.3
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..=++-.|...|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~H 26 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMRGH 26 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHTTC
T ss_pred CcCCCCCCcccCCHHHHHHHHHhc
Confidence 488999999998777777777665
No 200
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=52.21 E-value=5.9 Score=25.69 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=19.5
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRVH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGGG
T ss_pred CeECCccccccCChHHHHHHHHHh
Confidence 588999999998888888886665
No 201
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=51.48 E-value=7.7 Score=33.35 Aligned_cols=38 Identities=29% Similarity=0.670 Sum_probs=30.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhh
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH 387 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiH 387 (410)
+...|.-|+.+|.-.. ...-.|..|+..+|-.|-+++.
T Consensus 54 ~~~~C~~C~~~~g~l~---~~g~~C~~C~~~VC~~C~~~~~ 91 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLG---SASVVCEDCKKNVCTKCGVETS 91 (134)
T ss_dssp SSSBCSSSCCBCSTTS---CCEEECTTTCCEEETTSEEECC
T ss_pred CCccccccCCCccccc---CCCCCCCCCCcccccccCCccC
Confidence 4678999999984221 2347899999999999999974
No 202
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=51.47 E-value=3.3 Score=25.03 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=20.6
Q ss_pred eeCCCCCcccccccchhhhccCCC
Q 015267 369 VACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 369 ~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
|.|+.|++.|-..-++-.|...|.
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~~H~ 26 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIKTAF 26 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred CCCCCCCcccCCHHHHHHHHHHHc
Confidence 789999999998888888887774
No 203
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.47 E-value=4.2 Score=29.62 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=33.3
Q ss_pred CCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCcccc--ccccccCCCC--------CCCceeeCCC
Q 015267 306 CRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFG--CQQSLLSSGN--------KPGLYVACPK 373 (410)
Q Consensus 306 C~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~~--C~~~~~~~~~--------~~~~~~~C~~ 373 (410)
|+.|+..+.+..+|.+-. +|.- -+ ...|.- |.+.|..... .....|.|+.
T Consensus 12 ~~~C~~~f~~~~~L~~H~~~~H~~-~~-----------------~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 73 (79)
T 2dlk_A 12 FPGCGRIFSNRQYLNHHKKYQHIH-QK-----------------SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73 (79)
T ss_dssp STTTCCEESSHHHHHHHHHHGGGS-CC-----------------CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred CCCCcCccCCHHHHHHHHHHHhCC-CC-----------------CeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence 556999999999988764 3431 11 224665 7777754310 0123478888
Q ss_pred CCccc
Q 015267 374 CKKHF 378 (410)
Q Consensus 374 C~~~F 378 (410)
|++.|
T Consensus 74 C~k~F 78 (79)
T 2dlk_A 74 SGPSS 78 (79)
T ss_dssp SSCCC
T ss_pred CCCCC
Confidence 87766
No 204
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=51.41 E-value=4.2 Score=23.14 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=18.5
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~H 26 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRTH 26 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHC
T ss_pred CccCCCcChhhCCHHHHHHHHHHc
Confidence 488999999998777777776554
No 205
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.34 E-value=4.8 Score=26.24 Aligned_cols=24 Identities=25% Similarity=0.610 Sum_probs=19.3
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRVH 35 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHHc
Confidence 488888888888888887777665
No 206
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.19 E-value=6.9 Score=25.36 Aligned_cols=24 Identities=33% Similarity=0.825 Sum_probs=19.8
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRVH 35 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTT
T ss_pred CeECCCcCcccCCHHHHHHHHHHh
Confidence 588999999998888888887666
No 207
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=51.06 E-value=5.4 Score=26.55 Aligned_cols=8 Identities=50% Similarity=1.738 Sum_probs=5.8
Q ss_pred eeEcCCCC
Q 015267 289 GYTCPRCK 296 (410)
Q Consensus 289 GY~Cp~C~ 296 (410)
||+||.|.
T Consensus 5 GFiCP~C~ 12 (34)
T 3mjh_B 5 GFICPQCM 12 (34)
T ss_dssp EEECTTTC
T ss_pred ccCCcHHH
Confidence 78888654
No 208
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.01 E-value=4.1 Score=26.52 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=18.6
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRIH 35 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGGG
T ss_pred CeECCCcChhhCCHHHHHHHHHHc
Confidence 478888888888888877776655
No 209
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=50.54 E-value=2.7 Score=23.99 Aligned_cols=24 Identities=25% Similarity=0.564 Sum_probs=19.1
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|+..|-..-++-.|...|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHHh
Confidence 488999999998877777776554
No 210
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.45 E-value=5.6 Score=25.89 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=19.6
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKVH 35 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHhh
Confidence 488989998888888888887665
No 211
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=50.27 E-value=6.2 Score=27.12 Aligned_cols=42 Identities=17% Similarity=0.380 Sum_probs=27.4
Q ss_pred ccccccccccCCC--------CCCCceeeCCCCCcccccccchhhh-ccCC
Q 015267 350 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIH-ESLH 391 (410)
Q Consensus 350 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~FC~dCD~fiH-e~Lh 391 (410)
.|.-|.+.|.... -.....|.|+.|+..|-..=++-.| ...|
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H 54 (60)
T 2adr_A 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54 (60)
T ss_dssp CCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred cCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence 4777877775431 0122358888888888777777777 3555
No 212
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=50.09 E-value=5.9 Score=28.34 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=11.6
Q ss_pred eeeCCCCCcccccccchhhhc
Q 015267 368 YVACPKCKKHFCLECDIYIHE 388 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe 388 (410)
.|.|+.|+..|-..-++..|.
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~ 57 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHM 57 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHH
T ss_pred CEeCCCCCCccCCHHHHHHHH
Confidence 366666666665555544444
No 213
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=50.03 E-value=7.3 Score=40.76 Aligned_cols=57 Identities=23% Similarity=0.380 Sum_probs=37.5
Q ss_pred hhcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCC
Q 015267 322 SYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 398 (410)
Q Consensus 322 syhHlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~ 398 (410)
.-+|-|....|.. .+.|..|...|..-. ..+|.|..|+..+|..|-..+ ..|++=..
T Consensus 516 ~~~H~F~~~~~~~-------------~t~C~~C~~~l~gl~---~qg~~C~~C~~~vHk~C~~~v----~~C~~~~~ 572 (587)
T 3ky9_A 516 ANGHDFQMFSFEE-------------TTSCKACQMLLRGTF---YQGYRCHRCRASAHKECLGRV----PPCGRHGQ 572 (587)
T ss_dssp GGGCCEEEECCSS-------------CCBCTTTCSBCCSSS---CCEEEETTTCCEECSGGGGGS----CCC-----
T ss_pred ccCCceeEEeCCC-------------Ccccccccccccccc---cCCcCCCCCCCccchhhhhcC----CCCCCCCc
Confidence 3456665555543 458999988774322 247999999999999998876 36765543
No 214
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=49.92 E-value=7.9 Score=32.16 Aligned_cols=26 Identities=27% Similarity=0.646 Sum_probs=15.1
Q ss_pred ccccccccccCCCCCCCceeeCCCCCccc
Q 015267 350 TCFGCQQSLLSSGNKPGLYVACPKCKKHF 378 (410)
Q Consensus 350 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~F 378 (410)
.|-.|...|.+.. ...-+||.|++..
T Consensus 69 ~C~~CG~~F~~~~---~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 69 QCRKCGFVFKAEI---NIPSRCPKCKSEW 94 (105)
T ss_dssp BBTTTCCBCCCCS---SCCSSCSSSCCCC
T ss_pred ChhhCcCeecccC---CCCCCCcCCCCCc
Confidence 5778877772111 1234688887754
No 215
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=49.78 E-value=7.8 Score=30.53 Aligned_cols=31 Identities=26% Similarity=0.672 Sum_probs=24.1
Q ss_pred CCccccccc-cccCCCCCCCceeeCCCCCc----ccccccch
Q 015267 348 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKK----HFCLECDI 384 (410)
Q Consensus 348 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~----~FC~dCD~ 384 (410)
...|-+|.+ ++. +.||+|..|.. .+|.+|-.
T Consensus 21 ~~~Cd~C~~~pI~------G~RykC~~C~d~~~yDLC~~C~~ 56 (82)
T 2fc7_A 21 GFKCDNCGIEPIQ------GVRWHCQDCPPEMSLDFCDSCSD 56 (82)
T ss_dssp SCCCSSSCCSSEE------SCEEEESSSCSSSCCEEEGGGTT
T ss_pred cCCCCCCCCCcce------eceEECCcCCCCcceecHHHHHh
Confidence 457999985 443 25899999987 79999964
No 216
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.66 E-value=6.8 Score=25.44 Aligned_cols=24 Identities=33% Similarity=0.693 Sum_probs=19.6
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMVH 35 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGGG
T ss_pred CccCCCccchhCCHHHHHHHHHHh
Confidence 588999999998888888886665
No 217
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.50 E-value=8 Score=25.16 Aligned_cols=24 Identities=25% Similarity=0.682 Sum_probs=19.7
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKIH 35 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGGT
T ss_pred CeECCCCCchhCCHHHHHHHHHHh
Confidence 588999999988888888887666
No 218
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.30 E-value=6.4 Score=24.04 Aligned_cols=25 Identities=28% Similarity=0.446 Sum_probs=21.5
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-++-.|...|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLVHG 33 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHhc
Confidence 5999999999998888888887763
No 219
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=49.28 E-value=13 Score=30.75 Aligned_cols=86 Identities=19% Similarity=0.273 Sum_probs=56.4
Q ss_pred cCCCCCCCCCceecCchhHHhhh--cccCCC--CCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCce
Q 015267 301 ELPTDCRICGLQLVSSPHLARSY--HHLFPI--APFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLY 368 (410)
Q Consensus 301 ~lP~~C~~Cgl~LvssphLarsy--hHlfPl--~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~ 368 (410)
..+-.|+.|+..+.+...|.+-. ||.-.. ..+.. ....|.-|.+.|..... .....
T Consensus 23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~ 90 (155)
T 2rpc_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------YWEECPREGKSFKAKYKLVNHIRVHTGEKP 90 (155)
T ss_dssp CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC------------CBTTCTTSSCCCSSHHHHHHHTHHHHCCCS
T ss_pred hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc------------cccCCCCcccccCCHHHHHHHHHhcCCCCc
Confidence 34567888999999998887753 454211 11110 11369999988864320 01235
Q ss_pred eeCCC--CCcccccccchhhhccCC------CCCC--CCC
Q 015267 369 VACPK--CKKHFCLECDIYIHESLH------NCPG--CES 398 (410)
Q Consensus 369 ~~C~~--C~~~FC~dCD~fiHe~Lh------~CPg--C~~ 398 (410)
|.|+. |+..|=..=++-.|...| .|+. |..
T Consensus 91 ~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k 130 (155)
T 2rpc_A 91 FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130 (155)
T ss_dssp EECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCC
T ss_pred ccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCC
Confidence 99988 999998888888886655 6884 863
No 220
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=49.15 E-value=6.9 Score=34.43 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=29.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhh
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI 386 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fi 386 (410)
....|.-|+.+|.-..+ ..-.|..|+..+|-.|-+|.
T Consensus 67 ~~~~C~~C~~~fg~l~~---~g~~C~~C~~~VC~~C~~~~ 103 (153)
T 2zet_C 67 NETHCARCLQPYRLLLN---SRRQCLECSLFVCKSCSHAH 103 (153)
T ss_dssp GGTBCTTTCCBGGGCSS---CCEECTTTCCEECGGGEECC
T ss_pred CCccchhhcCccccccC---CCCcCCCCCchhhccccccc
Confidence 46789999998854322 24689999999999999765
No 221
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.11 E-value=6.3 Score=25.64 Aligned_cols=24 Identities=25% Similarity=0.595 Sum_probs=19.0
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeeCCCcCCccCCHHHHHHHHHHh
Confidence 488888888888888887776655
No 222
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=49.10 E-value=5.1 Score=26.18 Aligned_cols=24 Identities=29% Similarity=0.636 Sum_probs=16.8
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKLH 35 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHHH
T ss_pred CcccCccCcccCCHHHHHHHHHHc
Confidence 477888888777777776665444
No 223
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.90 E-value=11 Score=28.13 Aligned_cols=34 Identities=32% Similarity=0.700 Sum_probs=22.9
Q ss_pred eeEcCCCCccccc----------------CCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVCE----------------LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C~----------------lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+.|...|-. -|-.|+.|+..+.....|.+-
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H 84 (95)
T 2yt9_A 35 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84 (95)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence 4777777765431 456777788777777777654
No 224
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=48.72 E-value=5 Score=24.62 Aligned_cols=24 Identities=25% Similarity=0.652 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++..|...|
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred CccCCCCCcccCcHHHHHHHHHHh
Confidence 589999999998888888887665
No 225
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.54 E-value=6.8 Score=25.39 Aligned_cols=24 Identities=29% Similarity=0.631 Sum_probs=18.4
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|+..|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeECCCCChhhCCHHHHHHHHHhc
Confidence 488888888888877777776554
No 226
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=48.52 E-value=8.3 Score=21.80 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=15.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.||..+....+|.+-
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H 21 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRH 21 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHH
Confidence 45788899999888888763
No 227
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.47 E-value=4.3 Score=29.73 Aligned_cols=43 Identities=23% Similarity=0.541 Sum_probs=32.1
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 398 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~ 398 (410)
....|.-|...+.. .-..|++.||.+|-.-.-..-..||-|-.
T Consensus 14 ~~~~C~IC~~~~~~---------~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~ 56 (70)
T 2ecn_A 14 DEEECCICMDGRAD---------LILPCAHSFCQKCIDKWSDRHRNCPICRL 56 (70)
T ss_dssp CCCCCSSSCCSCCS---------EEETTTEEECHHHHHHSSCCCSSCHHHHH
T ss_pred CCCCCeeCCcCccC---------cccCCCCcccHHHHHHHHHCcCcCCCcCC
Confidence 45689999876642 23469999999997655556789999965
No 228
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.46 E-value=3.3 Score=32.35 Aligned_cols=25 Identities=28% Similarity=0.656 Sum_probs=20.5
Q ss_pred eeeCCCCCcccccccchhhhcc-CCC
Q 015267 368 YVACPKCKKHFCLECDIYIHES-LHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~-Lh~ 392 (410)
.|.|+.|+..|-..-++..|.. .|.
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCccccchhCCHHHHHHHHHHHcC
Confidence 4889999999988888888885 663
No 229
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.45 E-value=6.8 Score=25.39 Aligned_cols=24 Identities=25% Similarity=0.563 Sum_probs=17.3
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRIH 35 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTTT
T ss_pred CcCCCCCCCccCCHHHHHHHHHhc
Confidence 477777887777777777776655
No 230
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=48.35 E-value=11 Score=30.12 Aligned_cols=34 Identities=21% Similarity=0.526 Sum_probs=28.5
Q ss_pred eeEcCCCCcccc------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+.|+..|- +-|-.|+.||..+....+|.+-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H 119 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDH 119 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHH
T ss_pred CeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHH
Confidence 699999997664 5678999999999999888763
No 231
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=48.11 E-value=4.6 Score=32.90 Aligned_cols=56 Identities=18% Similarity=0.446 Sum_probs=36.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSN 403 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~ 403 (410)
....|.-|+..|..+... .....-..|+..||.+|=.-.-+.-..||.|.......
T Consensus 6 ~~~~C~IC~~~~~~~~~~-~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 61 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQN-GRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 61 (133)
T ss_dssp CSCBCTTTCCBHHHHHHT-TCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTT
T ss_pred CCCCCcccChhhhCcccc-ccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccc
Confidence 355799999877543000 01124558999999999755555567999998755433
No 232
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=47.96 E-value=6.6 Score=26.00 Aligned_cols=29 Identities=28% Similarity=0.336 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhccCC------CCCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH------NCPGC 396 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh------~CPgC 396 (410)
.|.|+.|++.|=..-.+-.|...| .|+-|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (48)
T 2epr_A 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46 (48)
T ss_dssp SEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCC
Confidence 588888888888888877776665 46666
No 233
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.81 E-value=4.3 Score=26.47 Aligned_cols=24 Identities=25% Similarity=0.540 Sum_probs=18.7
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeECCCCCCeeCChHHHHHHHHHc
Confidence 488989998888888877776544
No 234
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=47.59 E-value=5.7 Score=24.00 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++..|...|.
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGT
T ss_pred CeeCCCCCcccCCHHHHHHHHHHcC
Confidence 5999999999999888888877663
No 235
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.04 E-value=19 Score=26.75 Aligned_cols=43 Identities=21% Similarity=0.611 Sum_probs=30.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
....|.-|+..+... .---|++. ||.+|.. .+..||.|-....
T Consensus 14 ~~~~C~IC~~~~~~~--------v~~pCgH~~~C~~C~~----~~~~CP~CR~~i~ 57 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNW--------VLLPCRHTCLCDGCVK----YFQQCPMCRQFVQ 57 (68)
T ss_dssp CSSCCSSSSSSCCCC--------EETTTTBCCSCTTHHH----HCSSCTTTCCCCC
T ss_pred CCCCCCCcCcCCCCE--------EEECCCChhhhHHHHh----cCCCCCCCCcchh
Confidence 356899998554321 22358888 9999987 4789999987554
No 236
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=47.02 E-value=8.4 Score=31.20 Aligned_cols=47 Identities=26% Similarity=0.537 Sum_probs=32.3
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhc-cCCCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 402 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe-~Lh~CPgC~~~~~~ 402 (410)
...|.-|...+..+ .. ..|+..||.+|=.-.-+ .-..||-|......
T Consensus 23 ~~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 23 SISCQICEHILADP-------VE-TSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HTBCTTTCSBCSSE-------EE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCcHhcCc-------EE-cCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 34799998777532 22 47999999999543323 35689999875443
No 237
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=46.72 E-value=11 Score=21.36 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=15.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.||..+....+|.+-
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTH 21 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHH
Confidence 45788899999888888653
No 238
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=46.71 E-value=11 Score=28.23 Aligned_cols=34 Identities=29% Similarity=0.626 Sum_probs=25.6
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
.|.|+.|...|- +-|-.|+.|+..+.....|.+-
T Consensus 36 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 83 (96)
T 2dmd_A 36 PYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 83 (96)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred CEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence 588888887653 4466888899888888777653
No 239
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=46.05 E-value=4.8 Score=26.31 Aligned_cols=24 Identities=25% Similarity=0.577 Sum_probs=17.4
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRVH 35 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHHH
T ss_pred ceECCCCCchhCCHHHHHHHHHHc
Confidence 477888888887777777765544
No 240
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.95 E-value=8.6 Score=24.92 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=19.3
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHTT
T ss_pred CcCCCCCCcccCCHHHHHHHHHHh
Confidence 488888988888888888886665
No 241
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.93 E-value=3.8 Score=25.15 Aligned_cols=24 Identities=25% Similarity=0.571 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-.+-.|...|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRIH 32 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHHh
Confidence 599999999999888888887655
No 242
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=45.87 E-value=11 Score=28.15 Aligned_cols=37 Identities=30% Similarity=0.659 Sum_probs=27.3
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh--hcc
Q 015267 289 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS--YHH 325 (410)
Q Consensus 289 GY~Cp~C~s~~C--------------~lP~~C~~Cgl~LvssphLars--yhH 325 (410)
-|.|+.|+..|- +-|-.|+.|+..+.....|.+- .||
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~ 55 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence 488888887654 3466888999999888888764 445
No 243
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=45.87 E-value=4.2 Score=31.99 Aligned_cols=16 Identities=44% Similarity=0.991 Sum_probs=13.5
Q ss_pred cccccccchhh-hccCC
Q 015267 376 KHFCLECDIYI-HESLH 391 (410)
Q Consensus 376 ~~FC~dCD~fi-He~Lh 391 (410)
+.||.-||+|+ ||+..
T Consensus 3 kYyCdYCd~~lt~Ds~s 19 (77)
T 3cw1_L 3 KFYCDYCDTYLTHDSPS 19 (77)
T ss_pred CcccccCCceecCCCHH
Confidence 57999999999 99753
No 244
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.85 E-value=6.4 Score=25.59 Aligned_cols=24 Identities=29% Similarity=0.620 Sum_probs=17.9
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMVH 35 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHHT
T ss_pred CcCCCcCCchhCCHHHHHHHHHHc
Confidence 477888888888877777775544
No 245
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.66 E-value=5.1 Score=26.12 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=17.9
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CEeCCcCCCccCCHHHHHHHHHHH
Confidence 488888888888777777775544
No 246
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=45.01 E-value=13 Score=26.87 Aligned_cols=24 Identities=38% Similarity=0.747 Sum_probs=18.5
Q ss_pred eeEcCCCCcccccCCCCCCCCCce
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~ 312 (410)
-++||+|++..=.=-..|.-||-+
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSSSC
T ss_pred CccCCCCCCcCCCCceecCCCCCc
Confidence 689999999932222589999977
No 247
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.79 E-value=7.2 Score=25.33 Aligned_cols=24 Identities=29% Similarity=0.617 Sum_probs=18.8
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRSH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHS
T ss_pred CcCCCCCCCcCCChHHHHHHHHHh
Confidence 488888888888888877776555
No 248
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.76 E-value=8.3 Score=27.67 Aligned_cols=15 Identities=33% Similarity=0.820 Sum_probs=12.0
Q ss_pred CCceeeCCCCCcccc
Q 015267 365 PGLYVACPKCKKHFC 379 (410)
Q Consensus 365 ~~~~~~C~~C~~~FC 379 (410)
.+.+|.||+|+..|=
T Consensus 9 ~~~~~~CPrCn~~f~ 23 (49)
T 2e72_A 9 DGGRKICPRCNAQFR 23 (49)
T ss_dssp CSSCCCCTTTCCCCS
T ss_pred cCCceeCCccccccc
Confidence 446899999998873
No 249
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=44.58 E-value=3.7 Score=29.93 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=32.1
Q ss_pred CccccccccccCCCC--------CCCceeeCCCCCcccccccchhhhccCCC
Q 015267 349 STCFGCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~--------~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
-.|--|.+.|..... .....|.|+.|++.|-..-++-.|..+|.
T Consensus 5 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Ht 56 (60)
T 4gzn_C 5 FFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ 56 (60)
T ss_dssp EECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred ccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence 468888888864320 01235999999999999888888887763
No 250
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.30 E-value=14 Score=26.98 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=14.0
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H 34 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMH 34 (86)
T ss_dssp CEECSSSSCEESSHHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHH
Confidence 33456678888888888765
No 251
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.26 E-value=5.3 Score=26.02 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=18.1
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRTH 35 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHH
T ss_pred CcCCCCCCcccCcHHHHHHHHHHc
Confidence 488888888888887777775543
No 252
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.88 E-value=11 Score=24.41 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=19.9
Q ss_pred eeeCCCCCcccccccchhhhcc-CC
Q 015267 368 YVACPKCKKHFCLECDIYIHES-LH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~-Lh 391 (410)
.|.|+.|++.|=..-++..|.. .|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H 36 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYH 36 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTT
T ss_pred CEECCccCchhCChHHHHHHhHhhc
Confidence 4889999999988888888876 65
No 253
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.85 E-value=7.5 Score=25.24 Aligned_cols=24 Identities=25% Similarity=0.686 Sum_probs=19.6
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|+..|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHT
T ss_pred CeECCCCChhhCCHHHHHHHHHHc
Confidence 588999999998888888886655
No 254
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=42.93 E-value=6.4 Score=32.35 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=24.1
Q ss_pred eeccCccccCee-EcCCCCcccccCCCCCCCCCcee
Q 015267 279 SCHKEVKVGVGY-TCPRCKARVCELPTDCRICGLQL 313 (410)
Q Consensus 279 ~CH~~~~~~~GY-~Cp~C~s~~C~lP~~C~~Cgl~L 313 (410)
.|+..+...+|| .|+.|.+-|=.. ..||.|+-.|
T Consensus 37 ~Cq~eL~~~g~~~hC~~C~~~f~~~-a~CPdC~q~L 71 (101)
T 2jne_A 37 QCQHVLDQDNGHARCRSCGEFIEMK-ALCPDCHQPL 71 (101)
T ss_dssp SSCSBEEEETTEEEETTTCCEEEEE-EECTTTCSBC
T ss_pred cCCCcceecCCEEECccccchhhcc-ccCcchhhHH
Confidence 477777654455 599999976544 5799998754
No 255
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=42.84 E-value=7.7 Score=39.16 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=33.9
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhc-cCCCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 402 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe-~Lh~CPgC~~~~~~ 402 (410)
...|.-|...+.. -....|++.||.+|-.-.-+ .-..||-|-.....
T Consensus 332 ~~~C~ICle~~~~--------pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 332 FQLCKICAENDKD--------VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 379 (389)
T ss_dssp SSBCTTTSSSBCC--------EEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCE
T ss_pred CCCCCccCcCCCC--------eEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCC
Confidence 3589999866642 13457999999999754444 57899999875443
No 256
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.82 E-value=7 Score=28.17 Aligned_cols=42 Identities=19% Similarity=0.404 Sum_probs=22.2
Q ss_pred CccccccccccCCCC--------CCCceeeCCCCCcccccccchhhhccC
Q 015267 349 STCFGCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~--------~~~~~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
..|.-|.+.|..... .....|.|+.|+..|=..-++-.|...
T Consensus 15 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~ 64 (72)
T 1x6e_A 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64 (72)
T ss_dssp EECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence 356666666643210 012246777777766665555555443
No 257
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.70 E-value=11 Score=26.77 Aligned_cols=34 Identities=29% Similarity=0.741 Sum_probs=26.3
Q ss_pred eeEcCCCCccc-----------c-cCCCCCC-CCCceecCchhHHhh
Q 015267 289 GYTCPRCKARV-----------C-ELPTDCR-ICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp~C~s~~-----------C-~lP~~C~-~Cgl~LvssphLars 322 (410)
-|.|+.|+..| + +-|-.|+ .||..+...-+|.+-
T Consensus 10 ~~~C~~C~k~f~~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H 56 (66)
T 2eod_A 10 TQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGH 56 (66)
T ss_dssp EEECSSSCCEEEHHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHH
T ss_pred CeeccccCCccCHHHHHHHHHHcCCcCccCCcccCcccccHHHHHHH
Confidence 68899987654 2 4567899 999999888888764
No 258
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=42.65 E-value=10 Score=29.90 Aligned_cols=77 Identities=22% Similarity=0.514 Sum_probs=50.9
Q ss_pred CCCCC--CCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC--------CCCCceeeC
Q 015267 303 PTDCR--ICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG--------NKPGLYVAC 371 (410)
Q Consensus 303 P~~C~--~Cgl~LvssphLarsyh-HlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~--------~~~~~~~~C 371 (410)
|-.|+ .|+..+.+...|.+-.. | ... ...|..|.+.|.... -.....|.|
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h--~~~-----------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C 65 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHTH--GPR-----------------VHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGGG--SCC-----------------CEECTTTCCEESSHHHHHHHGGGTSCCCCEEC
T ss_pred cccCCCCCCcCccCCHHHHHHHHHHc--CCC-----------------CeECCCCCchhCCHHHHHHHHHHcCCCCCeeC
Confidence 44688 89999999888877532 2 111 235888888886432 012235899
Q ss_pred CC--CCcccccccchhhhcc------CCCCC--CCCC
Q 015267 372 PK--CKKHFCLECDIYIHES------LHNCP--GCES 398 (410)
Q Consensus 372 ~~--C~~~FC~dCD~fiHe~------Lh~CP--gC~~ 398 (410)
+. |+..|=..=++-.|.. ...|| +|..
T Consensus 66 ~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~ 102 (124)
T 1ubd_C 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 102 (124)
T ss_dssp CSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCC
T ss_pred CCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCC
Confidence 74 9999887777776644 45786 5864
No 259
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=42.30 E-value=39 Score=31.56 Aligned_cols=55 Identities=24% Similarity=0.410 Sum_probs=39.6
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchh
Q 015267 151 SGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE 215 (410)
Q Consensus 151 ~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE 215 (410)
-|+-.|+. |..+..++| .-.+||+-||+- .|.|.++++.+|+++|+|=...+...
T Consensus 128 vge~~l~~----av~av~~lp---r~~~lvlags~m---gg~i~~~v~~~~~~~i~vi~l~m~gs 182 (223)
T 1y7p_A 128 VGEEEIAE----AVKAVSRLH---RAEVLVLAGGIM---GGKITEEVKKLRKSGIRVISLSMFGS 182 (223)
T ss_dssp CSHHHHHH----HHHHGGGST---TEEEEEEESSBC---CTHHHHHHHHHGGGTCEEEEESCBSS
T ss_pred cCHHHHHH----HHHHHhhcc---ccceeeEecccc---cchHHHHHHHHHHCCCeEEEecCCCC
Confidence 46555544 455566665 226999999886 48999999999999998766665544
No 260
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.13 E-value=9.9 Score=28.39 Aligned_cols=30 Identities=23% Similarity=0.785 Sum_probs=23.2
Q ss_pred Ccccccccc-ccCCCCCCCceeeCCCCCcc-cccccch
Q 015267 349 STCFGCQQS-LLSSGNKPGLYVACPKCKKH-FCLECDI 384 (410)
Q Consensus 349 ~~C~~C~~~-~~~~~~~~~~~~~C~~C~~~-FC~dCD~ 384 (410)
..|-+|... +. +.||+|..|... +|.+|-.
T Consensus 12 ~~Cd~C~~~pi~------G~RykC~~C~d~DLC~~C~~ 43 (63)
T 2e5r_A 12 VECSYCHSESMM------GFRYRCQQCHNYQLCQDCFW 43 (63)
T ss_dssp SCCSSSCCCSSC------SCEEEESSCSSCEECHHHHH
T ss_pred CCCcCCCCccee------cceEEecCCCCchhHHHHHh
Confidence 689999864 43 258999999764 8999954
No 261
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=41.80 E-value=6.7 Score=29.24 Aligned_cols=21 Identities=33% Similarity=0.808 Sum_probs=14.6
Q ss_pred eccCccccCeeEcCCCCcccc
Q 015267 280 CHKEVKVGVGYTCPRCKARVC 300 (410)
Q Consensus 280 CH~~~~~~~GY~Cp~C~s~~C 300 (410)
|-..+...+.|.||+|+..||
T Consensus 21 C~~~~~~~~~y~C~~C~~~FC 41 (59)
T 1z60_A 21 CQGELKDQHVYVCAVCQNVFC 41 (59)
T ss_dssp TTEECTTSEEECCTTTTCCBC
T ss_pred cCcccCCCccEECCccCcCcc
Confidence 333343442599999999998
No 262
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=41.77 E-value=13 Score=30.73 Aligned_cols=24 Identities=21% Similarity=0.468 Sum_probs=18.9
Q ss_pred eeEcCCCCcccc--cCCC-CCCCCCce
Q 015267 289 GYTCPRCKARVC--ELPT-DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C--~lP~-~C~~Cgl~ 312 (410)
-|.|..|+..|= +.+. .||.||-.
T Consensus 73 ~~~C~~CG~~~e~~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 73 ELECKDCSHVFKPNALDYGVCEKCHSK 99 (119)
T ss_dssp EEECSSSSCEECSCCSTTCCCSSSSSC
T ss_pred eEEcCCCCCEEeCCCCCCCcCccccCC
Confidence 789999988764 5567 89999865
No 263
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.62 E-value=7.8 Score=25.08 Aligned_cols=24 Identities=33% Similarity=0.595 Sum_probs=16.7
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERLH 35 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHHC
T ss_pred CeECCCCCCccCchHHHHHHHHhc
Confidence 477888887777777776665544
No 264
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=41.58 E-value=8.8 Score=23.97 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=22.2
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-.+..|...|.
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~H~ 30 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNVHR 30 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred ceECCCCCcccCCHHHHHHHHHHcC
Confidence 5999999999999999999988775
No 265
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=40.88 E-value=12 Score=28.03 Aligned_cols=25 Identities=28% Similarity=0.785 Sum_probs=19.6
Q ss_pred eEcCCCCcccccCCCCCCCCCceecCc
Q 015267 290 YTCPRCKARVCELPTDCRICGLQLVSS 316 (410)
Q Consensus 290 Y~Cp~C~s~~C~lP~~C~~Cgl~Lvss 316 (410)
-.||.|+.. .|--.||.||....++
T Consensus 6 r~C~~Cg~Y--TLk~~CP~CG~~t~~a 30 (60)
T 2aus_D 6 RKCPKCGRY--TLKETCPVCGEKTKVA 30 (60)
T ss_dssp EECTTTCCE--ESSSBCTTTCSBCEES
T ss_pred eECCCCCCE--EccccCcCCCCccCCC
Confidence 479999876 4577899999887654
No 266
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=40.85 E-value=13 Score=22.44 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=16.1
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.||..+....+|.+-
T Consensus 2 p~~C~~C~k~F~~~~~L~~H 21 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKH 21 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHH
T ss_pred cccCCCCCchhCCHHHHHHH
Confidence 45788899999998888754
No 267
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.84 E-value=7.1 Score=23.80 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=20.5
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|=..-++-.|...|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHHSS
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 5999999999988888878876653
No 268
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=40.64 E-value=8.4 Score=28.15 Aligned_cols=48 Identities=15% Similarity=0.346 Sum_probs=34.6
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
...|.-|...+.+ ..+.=.-|++. ||.+|..-+.+.-..||.|-....
T Consensus 7 ~~~C~IC~~~~~~------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 7 LKPCSLCEKRPRD------GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GSBCTTTSSSBSC------EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CCCCcccCCcCCC------eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 4579999855432 12222468887 999999988877789999976543
No 269
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.23 E-value=12 Score=27.24 Aligned_cols=45 Identities=24% Similarity=0.445 Sum_probs=30.7
Q ss_pred CCccccccccccCCC--------CCCCceeeCCCCCcccccccchhhhccCCC
Q 015267 348 RSTCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
...|.-|.+.|.... -.....|.|+.|+..|-..-++-.|...|.
T Consensus 18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~ 70 (77)
T 2cot_A 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70 (77)
T ss_dssp SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSC
T ss_pred CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhC
Confidence 346888888776431 011235888888888888888888877663
No 270
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.10 E-value=14 Score=27.24 Aligned_cols=34 Identities=21% Similarity=0.508 Sum_probs=24.7
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
...|.-|.. . ..|.||+|.-.||--=-..+|...
T Consensus 12 ~~~C~vC~~-~--------~kY~CPrC~~~yCSl~C~k~Hk~~ 45 (56)
T 2yqq_A 12 TVVCVICLE-K--------PKYRCPACRVPYCSVVCFRKHKEQ 45 (56)
T ss_dssp CCCCTTTCS-C--------CSEECTTTCCEESSHHHHHHHHHH
T ss_pred CCccCcCcC-C--------CeeeCCCCCCCeeCHHHHHHHHhh
Confidence 347999985 2 369999999999974335566654
No 271
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=39.93 E-value=14 Score=30.22 Aligned_cols=52 Identities=17% Similarity=0.297 Sum_probs=33.5
Q ss_pred CCccccccccccCCC----------CCCCceeeCCCCCcccccccchhhhccCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSG----------NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESL 399 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~----------~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~ 399 (410)
...|.-|...|...- ..+.....-..|++.|+.+|=.---..-..||-|-..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 457999988876431 0011112335799999999965544556789999653
No 272
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.89 E-value=11 Score=23.85 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRIHT 35 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred CEECCCCCCccCCHHHHHHHHHhcC
Confidence 5899999999999999999987774
No 273
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.63 E-value=13 Score=27.94 Aligned_cols=57 Identities=18% Similarity=0.318 Sum_probs=36.2
Q ss_pred CCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceeeCCCCCccccccc
Q 015267 305 DCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLEC 382 (410)
Q Consensus 305 ~C~~Cgl~LvssphLarsy--hHlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dC 382 (410)
.|+.|+..+....+|.+-. ||.-. ....++.|. .|.|+.|++.|=..-
T Consensus 27 ~C~~C~k~f~~~~~L~~H~~~~H~~~------------------~~~~~~~c~------------~~~C~~C~k~f~~~~ 76 (95)
T 2ej4_A 27 PKKSCDRTFSTMHELVTHVTMEHVGG------------------PEQNNHVCY------------WEECPREGKSFKAKY 76 (95)
T ss_dssp SCCCCCCCCSSHHHHHHHHHHTTTCC------------------TTCSCCCCC------------CTTCSSTTCCCSSHH
T ss_pred cccccccccCCHHHHHHHHHHhccCC------------------CCCCcccee------------ccCCCCCCcccCCHH
Confidence 5889999999999998753 35310 011233332 266888888887777
Q ss_pred chhhhccCC
Q 015267 383 DIYIHESLH 391 (410)
Q Consensus 383 D~fiHe~Lh 391 (410)
.+-.|...|
T Consensus 77 ~L~~H~~~H 85 (95)
T 2ej4_A 77 KLVNHIRVH 85 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 777665443
No 274
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.56 E-value=21 Score=26.88 Aligned_cols=39 Identities=28% Similarity=0.770 Sum_probs=27.8
Q ss_pred CCCcccc--ccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 347 SRSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 347 ~~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
....|.. |.+.- -..|.|..|++.||.+ -=+..-|.|++
T Consensus 11 ~~~~Cs~~~Ck~~~-------ll~f~C~~C~~~FC~~---HR~~e~H~C~~ 51 (63)
T 1x4v_A 11 FTNKCERAGCRQRE-------MMKLTCERCSRNFCIK---HRHPLDHDCSG 51 (63)
T ss_dssp TCCCCCSTTCCCCC-------SSCCBCSSSCCBCCHH---HHSTTSSCCCS
T ss_pred cCCCCCccCCCCCC-------ccceECCCCCcccCcc---cCCccCCcCCC
Confidence 3557888 97441 1358999999999985 33455799986
No 275
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=39.56 E-value=22 Score=22.49 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=21.4
Q ss_pred eeEcCCCCcccccCCCCCCCCCcee
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQL 313 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~L 313 (410)
.+.||+|....=..-..|.+|+..+
T Consensus 6 ~W~C~~CTf~N~~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 6 MWACQHCTFMNQPGTGHCEMCSLPR 30 (31)
T ss_dssp CEECSSSCCEECSSCSSCSSSCCCC
T ss_pred cccCCcccccCCCCCCccCCcCCCC
Confidence 7899999998877778999999764
No 276
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=38.61 E-value=8.1 Score=23.12 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=20.6
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~ 31 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIREVH 31 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred CeECCCCcchhCCHHHHHHHHHHHc
Confidence 5999999999988888888876653
No 277
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.36 E-value=6.1 Score=23.99 Aligned_cols=24 Identities=21% Similarity=0.563 Sum_probs=19.7
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|+..|=..-++-.|...|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRKH 32 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHHc
Confidence 599999999998888877776554
No 278
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.18 E-value=11 Score=24.28 Aligned_cols=25 Identities=24% Similarity=0.541 Sum_probs=22.2
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGIHT 36 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTTTT
T ss_pred CeECCCCCcccCCHHHHHHHHHhhC
Confidence 5899999999999999999988774
No 279
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=38.01 E-value=57 Score=30.41 Aligned_cols=91 Identities=14% Similarity=0.037 Sum_probs=55.2
Q ss_pred HHHHHHhhhc-CC-CCcch---HHH-HHHHHHHHHhCCCCCCC------ceEEEEEeCCCCCCcccHHHHHHHHHHcCeE
Q 015267 139 SHIKALMGKL-GC-SGDSS---LQN-ALDLVQGLLSQIPSYGH------REVLILYSALSTCDPGDIMETIQKCKESKIR 206 (410)
Q Consensus 139 ~~i~~L~~~~-~~-~G~~S---Lqn-aL~~A~~~L~~~p~~~s------reILVi~~S~~t~DpgdI~~ti~~akk~~Ir 206 (410)
+.+.++++.. +. .|-++ .++ |..+|...++..|.... ++|+|+-|+. ++.||=.-++..|+..|.+
T Consensus 10 ~qmr~~d~~a~~~~~gi~~~~LME~Ag~ava~~i~~~~~~~~~~~~~~~~~v~VlcG~G--NNGGDGlv~AR~L~~~G~~ 87 (246)
T 1jzt_A 10 KLAAEIDKELMGPQIGFTLQQLMELAGFSVAQAVCRQFPLRGKTETEKGKHVFVIAGPG--NNGGDGLVCARHLKLFGYN 87 (246)
T ss_dssp HHHHHHHHHHTSTTTCCCHHHHHHHHHHHHHHHHHHHSCCSSCCHHHHTCEEEEEECSS--HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhhhcCcCHHHHHHHHHHHHHHHHHHHccccccccccCCCeEEEEECCC--CCHHHHHHHHHHHHHCCCe
Confidence 3455555533 22 35333 233 34445445555553212 5798888854 5678888999999999999
Q ss_pred EEEEEcch-----hHHHHHHHHHhhCCeeE
Q 015267 207 CSVIGLSA-----EMFICKHLCQDTGGSYS 231 (410)
Q Consensus 207 V~vIgL~a-----E~~iLk~la~~TgG~Y~ 231 (410)
|.|+-++. +.....++++..|+...
T Consensus 88 V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 88 PVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 99986653 22334455667777643
No 280
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.01 E-value=13 Score=24.14 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.3
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRVHS 36 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred CcCCCCcCchhCCHHHHHHHHHHhC
Confidence 5999999999999999999988774
No 281
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=37.96 E-value=7.6 Score=21.99 Aligned_cols=24 Identities=21% Similarity=0.515 Sum_probs=19.9
Q ss_pred eeeCC--CCCcccccccchhhhccCC
Q 015267 368 YVACP--KCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~--~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+ .|++.|-..-++-.|...|
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~H 27 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKIH 27 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence 38899 9999998888888887766
No 282
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.28 E-value=12 Score=23.55 Aligned_cols=25 Identities=24% Similarity=0.562 Sum_probs=21.6
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRVHT 35 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGGTS
T ss_pred CeeCCCccchhCCHHHHHHHHHHhC
Confidence 5899999999999988888887763
No 283
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.20 E-value=5 Score=26.29 Aligned_cols=23 Identities=26% Similarity=0.401 Sum_probs=15.7
Q ss_pred eeeCCCCCcccccccchhhhccC
Q 015267 368 YVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHHH
Confidence 47777787777777776666443
No 284
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=37.19 E-value=23 Score=28.36 Aligned_cols=54 Identities=4% Similarity=-0.258 Sum_probs=35.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCcccC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 408 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~~~~ 408 (410)
..-.|.-|+..|.++ . ...|++.||..|=.-.-+.-..||.|........++.|
T Consensus 28 ~~~~CpI~~~~m~dP-------V-~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 28 DEFRDPLMDTLMTDP-------V-RLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp TTTBCTTTCSBCSSE-------E-EETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEEC
T ss_pred HhhCCcCccCcccCC-------e-ECCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceEC
Confidence 356799998777654 2 22499999999953322345789999875544444433
No 285
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=36.91 E-value=12 Score=24.05 Aligned_cols=29 Identities=24% Similarity=0.433 Sum_probs=19.8
Q ss_pred eeeCCCCCcccccccchhhhccCC------CCCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH------NCPGC 396 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh------~CPgC 396 (410)
.|.|+.|++.|-..-++-.|...| .||.|
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c 44 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS 44 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence 477888888887777776665443 46655
No 286
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.91 E-value=13 Score=23.95 Aligned_cols=25 Identities=24% Similarity=0.543 Sum_probs=22.2
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRRIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGGTS
T ss_pred CEECCCCChhhCChHHHHHHHHhcC
Confidence 5999999999999999999987773
No 287
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.57 E-value=8.7 Score=24.63 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=17.8
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++..|...|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H 33 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQTH 33 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 488888888888877777775443
No 288
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=36.48 E-value=19 Score=25.55 Aligned_cols=34 Identities=38% Similarity=0.853 Sum_probs=25.4
Q ss_pred eeEcC--CCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 015267 289 GYTCP--RCKARVC--------------ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 289 GY~Cp--~C~s~~C--------------~lP~~C~~Cgl~LvssphLars 322 (410)
-|.|+ .|+..|- +-|-.|+.||..+.....|.+-
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 68 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHH
Confidence 58887 5877653 3466899999999888888653
No 289
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=36.35 E-value=21 Score=27.59 Aligned_cols=52 Identities=4% Similarity=-0.218 Sum_probs=34.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCCCCCCCCCCCcc
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIV 406 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~~ 406 (410)
..-.|.-|+..|.++ .. ..|++.||..|=.-.-+.-..||.|........++
T Consensus 13 ~~~~CpI~~~~m~dP-------V~-~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~ 64 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDP-------VR-LPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLE 64 (85)
T ss_dssp TTTBCTTTCSBCSSE-------EE-CTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCE
T ss_pred hheECcccCchhcCC-------eE-CCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcc
Confidence 356799998777653 22 34999999999543333457899998654433333
No 290
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.22 E-value=12 Score=29.56 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=30.8
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccch-hhhcc-----CCCCCC--CCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHES-----LHNCPG--CES 398 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-fiHe~-----Lh~CPg--C~~ 398 (410)
.-.|.-|+..|.++ ..-+.|++.||..|=. ++.+. -..||- |..
T Consensus 7 ~~~CPI~~~~~~dP-------V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~ 58 (94)
T 2yu4_A 7 GFTCPITKEEMKKP-------VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSH 58 (94)
T ss_dssp CCBCTTTCSBCSSE-------EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCC
T ss_pred EeECcCcCchhcCC-------EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcc
Confidence 45799999888643 3455799999999953 33322 458999 863
No 291
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.22 E-value=14 Score=23.17 Aligned_cols=25 Identities=28% Similarity=0.654 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERIHT 34 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGGCC
T ss_pred CeECCCCCCCcCCHHHHHHHHHHhC
Confidence 5999999999999888888987774
No 292
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.21 E-value=8.1 Score=25.14 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=17.8
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWITH 35 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTHH
T ss_pred CeeCCCCCcccCCHHHHHHHHHHc
Confidence 478888888888877777775443
No 293
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=36.17 E-value=14 Score=28.74 Aligned_cols=43 Identities=23% Similarity=0.438 Sum_probs=25.8
Q ss_pred CccccccccccCCCC--------CCCceeeCCCCCcccccccchhhh-ccCC
Q 015267 349 STCFGCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIH-ESLH 391 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~--------~~~~~~~C~~C~~~FC~dCD~fiH-e~Lh 391 (410)
..|.-|.+.|..... .....|.|+.|++.|=..-.+-.| ...|
T Consensus 29 h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H 80 (85)
T 2lv2_A 29 HLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH 80 (85)
T ss_dssp EECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred EECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence 357777777764320 112357777777777776666666 3444
No 294
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=36.08 E-value=13 Score=30.60 Aligned_cols=31 Identities=6% Similarity=0.016 Sum_probs=14.4
Q ss_pred CcccccccchhhhccCCCCCCCCCCCCCCCc
Q 015267 375 KKHFCLECDIYIHESLHNCPGCESLRHSNPI 405 (410)
Q Consensus 375 ~~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~ 405 (410)
++.||..|-.-..-....|-+|...+.+..|
T Consensus 54 g~~yC~~cy~~~f~~~~~C~~C~~~I~~~~~ 84 (122)
T 1m3v_A 54 GMILCRNDYIRLFGNSGAGGSGGHMGSGGDV 84 (122)
T ss_dssp TEEECHHHHHHHHCCCCSSSCSSCCSCCEES
T ss_pred CeeecHHHHHHHcCCCCccccCCCCcCchhe
Confidence 4455555543333333356666554444333
No 295
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=35.99 E-value=2.8 Score=35.31 Aligned_cols=51 Identities=18% Similarity=0.299 Sum_probs=0.4
Q ss_pred CCccccccccccCCCC----------CCCceeeCCCCCcccccccchhhhccCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGN----------KPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 398 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~----------~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~ 398 (410)
...|.-|...|..+.. .+.....-+.|+..|+.+|=.---.+-..||-|-.
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~ 108 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 108 (117)
T ss_dssp C------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCC
Confidence 4579999988864210 01111223479999999995443344568999965
No 296
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.71 E-value=17 Score=23.43 Aligned_cols=23 Identities=22% Similarity=0.486 Sum_probs=17.3
Q ss_pred eeeCCCCCcccccccchhhhccC
Q 015267 368 YVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHHh
Confidence 48888888888887777776443
No 297
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=35.61 E-value=12 Score=26.94 Aligned_cols=30 Identities=23% Similarity=0.630 Sum_probs=23.5
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccch
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDI 384 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~ 384 (410)
...|-+|.+.+. .||.|..|... +|..|-.
T Consensus 6 ~~~Cd~C~~~ig-------~R~~C~~C~dyDLC~~C~~ 36 (52)
T 1tot_A 6 VYTCNECKHHVE-------TRWHCTVCEDYDLCINCYN 36 (52)
T ss_dssp CEEETTTTEEES-------SEEEESSSSSCEECHHHHH
T ss_pred EEECCCCCCCCc-------ceEEcCCCCCchhHHHHHh
Confidence 457999997641 48999999775 8999954
No 298
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.53 E-value=18 Score=23.21 Aligned_cols=23 Identities=22% Similarity=0.527 Sum_probs=17.4
Q ss_pred eeeCCCCCcccccccchhhhccC
Q 015267 368 YVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHHHH
Confidence 48888888888887777777543
No 299
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.45 E-value=18 Score=23.29 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=17.3
Q ss_pred eeeCCCCCcccccccchhhhccC
Q 015267 368 YVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CEEccccCcccCCHHHHHHHHHH
Confidence 48888888888887777776443
No 300
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.45 E-value=16 Score=23.65 Aligned_cols=25 Identities=32% Similarity=0.620 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHERIHT 36 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHTTCC
T ss_pred CEECcCCCCcCCCHHHHHHHHHHcC
Confidence 5999999999999999888877764
No 301
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=35.44 E-value=13 Score=28.31 Aligned_cols=27 Identities=26% Similarity=0.717 Sum_probs=20.8
Q ss_pred EcCCCCcccc-----cCCCCCCCCCceecCch
Q 015267 291 TCPRCKARVC-----ELPTDCRICGLQLVSSP 317 (410)
Q Consensus 291 ~Cp~C~s~~C-----~lP~~C~~Cgl~Lvssp 317 (410)
.||.|..+.- ..++.|..||.+|.-++
T Consensus 9 KCp~C~niq~VFShA~tvV~C~~Cg~~L~~PT 40 (66)
T 1qxf_A 9 KCPDCEHEQVIFDHPSTIVKCIICGRTVAEPT 40 (66)
T ss_dssp ECTTTCCEEEEESSCSSCEECSSSCCEEEECC
T ss_pred ECCCCCCceEEEecCceEEEcccCCCEEeecC
Confidence 5999988654 44589999999997543
No 302
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=35.40 E-value=12 Score=24.92 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.3
Q ss_pred eeeCCCCCcccccccchhhhcc-CCC
Q 015267 368 YVACPKCKKHFCLECDIYIHES-LHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~-Lh~ 392 (410)
.|.|+.|++.|-..-++-.|.. .|.
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~ 32 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHL 32 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcC
Confidence 5999999999999999999988 774
No 303
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.22 E-value=13 Score=24.00 Aligned_cols=25 Identities=28% Similarity=0.688 Sum_probs=22.1
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKIHT 36 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTTTS
T ss_pred CEECCccCcccCCHHHHHHHHHHhC
Confidence 5899999999999999999988774
No 304
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=35.10 E-value=46 Score=27.72 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=41.8
Q ss_pred CcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCC--Cc-----------ccHHHHHHHHHHcCeEEEEEEcch
Q 015267 152 GDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTC--DP-----------GDIMETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 152 G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~--Dp-----------gdI~~ti~~akk~~IrV~vIgL~a 214 (410)
+.....+||.+|..++.. ..+|-||+...... .. .++.+.++.+++.|++|++|..+.
T Consensus 28 ~~~~~~~al~lA~~A~a~-----g~eV~vFf~~dGV~~l~k~~~~~i~~~~~~~~~~ll~~~~~~Gv~v~vC~~s~ 98 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASM-----EYETSVFFMIXGPXLLDXXWQEEERXXGGNPFIHFFDMAXENGVXMYVCVQSL 98 (134)
T ss_dssp GTHHHHHHHHHHHHHHHT-----TCEEEEEECTTGGGGGBHHHHHHHHHHCCCHHHHHHHHHHHTTCEEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHC-----CCCEEEEEEeCcHHHHhhcchhhcccCCCCCHHHHHHHHHHcCCcEEEcHhHH
Confidence 345778889999888875 24787887655431 11 235577999999999999998876
No 305
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.10 E-value=21 Score=22.97 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=17.4
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRVH 35 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHHH
T ss_pred CeECCcCCchhCCHHHHHHHHHhc
Confidence 488888888888777777765433
No 306
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=34.58 E-value=59 Score=30.80 Aligned_cols=90 Identities=13% Similarity=0.069 Sum_probs=55.0
Q ss_pred HHHHHHhhhc-CCCCcch---HHH-HHHHHHHHHhCCCCCC----CceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEE
Q 015267 139 SHIKALMGKL-GCSGDSS---LQN-ALDLVQGLLSQIPSYG----HREVLILYSALSTCDPGDIMETIQKCKESKIRCSV 209 (410)
Q Consensus 139 ~~i~~L~~~~-~~~G~~S---Lqn-aL~~A~~~L~~~p~~~----sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~v 209 (410)
+.+.++++.. +..|-++ .++ |..+|...++..|... .++|+|+.|+. ++.||=.-++..|+..|.+|.|
T Consensus 34 ~qmr~iD~~a~~~~Gi~~~~LME~AG~ava~~i~~~~~~~~~~~~~~~VlVlcG~G--NNGGDGlv~AR~L~~~G~~V~V 111 (265)
T 2o8n_A 34 EEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSKSPPTVLVICGPG--NNGGDGLVCARHLKLFGYQPTI 111 (265)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHSCGGGSSSSSCEEEEEECSS--HHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHcccccccCCCCeEEEEECCC--CCHHHHHHHHHHHHHCCCcEEE
Confidence 4455565532 2334333 333 3444444445444211 14798888854 5678888999999999999999
Q ss_pred EEcc----hhHHHHHHHHHhhCCee
Q 015267 210 IGLS----AEMFICKHLCQDTGGSY 230 (410)
Q Consensus 210 IgL~----aE~~iLk~la~~TgG~Y 230 (410)
+-++ .+.....++++..|+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~g~~~ 136 (265)
T 2o8n_A 112 YYPKRPNKPLFTGLVTQCQKMDIPF 136 (265)
T ss_dssp ECCSCCSSHHHHHHHHHHHHTTCCB
T ss_pred EEeCCCCCHHHHHHHHHHHHcCCcE
Confidence 8664 23344556667778764
No 307
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.52 E-value=20 Score=23.15 Aligned_cols=23 Identities=22% Similarity=0.472 Sum_probs=17.4
Q ss_pred eeeCCCCCcccccccchhhhccC
Q 015267 368 YVACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~L 390 (410)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECcccCchhCCHHHHHHHHHH
Confidence 58888888888877777666544
No 308
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.49 E-value=12 Score=24.16 Aligned_cols=25 Identities=24% Similarity=0.643 Sum_probs=21.8
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRIHR 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGC
T ss_pred CCCCCCCCcccCCHHHHHHHHhHhC
Confidence 5999999999999999988887764
No 309
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.39 E-value=19 Score=23.14 Aligned_cols=24 Identities=25% Similarity=0.495 Sum_probs=17.8
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVLH 35 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CEEccccChhhCCHHHHHHHHHHh
Confidence 488888888888877777775443
No 310
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=34.39 E-value=18 Score=40.93 Aligned_cols=26 Identities=38% Similarity=0.984 Sum_probs=20.3
Q ss_pred eeEcCCCCc----------ccccCC-CCCCCCCceec
Q 015267 289 GYTCPRCKA----------RVCELP-TDCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s----------~~C~lP-~~C~~Cgl~Lv 314 (410)
.|+||.|+- -=++|| -.||.||..|.
T Consensus 502 hy~c~~c~~~ef~~~~~~~~g~dlp~k~cp~cg~~~~ 538 (1041)
T 3f2b_A 502 HYVCPNCKHSEFFNDGSVGSGFDLPDKNCPRCGTKYK 538 (1041)
T ss_dssp EEECTTTCCEEECCSSCCSCGGGSCCCBCTTTCCBCE
T ss_pred cccCccccccccccccccccccCCccccCcccccccc
Confidence 899999983 125677 48999999864
No 311
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.32 E-value=14 Score=23.83 Aligned_cols=25 Identities=24% Similarity=0.677 Sum_probs=22.1
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRTHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHTSC
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhC
Confidence 5999999999999999999987774
No 312
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.27 E-value=9.5 Score=24.77 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=19.1
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CEECCcCCchhCCHHHHHHHHHHh
Confidence 588999999998888887776554
No 313
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=34.17 E-value=14 Score=32.15 Aligned_cols=24 Identities=25% Similarity=0.661 Sum_probs=12.5
Q ss_pred CccccccccccCCCCCCCceeeCCCCCc
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKK 376 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~ 376 (410)
..|.+|...|... ...-.||.|++
T Consensus 133 y~C~~Cg~~~~~~----~~~~~Cp~CG~ 156 (165)
T 2lcq_A 133 YVCIGCGRKFSTL----PPGGVCPDCGS 156 (165)
T ss_dssp EEESSSCCEESSC----CGGGBCTTTCC
T ss_pred EECCCCCCcccCC----CCCCcCCCCCC
Confidence 4577776666421 11224666665
No 314
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=34.15 E-value=18 Score=26.93 Aligned_cols=32 Identities=25% Similarity=0.655 Sum_probs=22.8
Q ss_pred CCccccccc--cccCCCCCCCceeeCCCCCccccc-ccchhhh
Q 015267 348 RSTCFGCQQ--SLLSSGNKPGLYVACPKCKKHFCL-ECDIYIH 387 (410)
Q Consensus 348 ~~~C~~C~~--~~~~~~~~~~~~~~C~~C~~~FC~-dCD~fiH 387 (410)
...|.-|.. ..+ ..|.||+|+-.||- .|-. +|
T Consensus 11 ~~~C~vC~~~~~~~-------akY~CPrC~~rYCSl~C~k-~H 45 (59)
T 1x4s_A 11 AGPCGFCPAGEVQP-------ARYTCPRCNAPYCSLRCYR-TH 45 (59)
T ss_dssp CEEECSSCTTCCEE-------ECEECTTTCCEESSHHHHH-HH
T ss_pred CCcCcCCCCCcCCC-------ccccCcCCCCCccChHHHH-HH
Confidence 458999974 121 36999999999996 5544 45
No 315
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.13 E-value=14 Score=23.84 Aligned_cols=25 Identities=24% Similarity=0.582 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQRVHT 36 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHTTTS
T ss_pred CeECCCCCcccCCHHHHHHHHHHcC
Confidence 5899999999999999999987764
No 316
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=33.96 E-value=1.5e+02 Score=30.06 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=47.2
Q ss_pred eEEEEEeCCCCCCcccHH-HHHHHHHHc--CeEEEEEEcchhHHHHHHHHHhhCCeeEEeCCHHHHHHH
Q 015267 177 EVLILYSALSTCDPGDIM-ETIQKCKES--KIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKEL 242 (410)
Q Consensus 177 eILVi~~S~~t~DpgdI~-~ti~~akk~--~IrV~vIgL~aE~~iLk~la~~TgG~Y~va~d~~hl~~l 242 (410)
+-|+|+||- |+|- +|++.++++ +.+|..++-+..+..|.+.+.+.+=.|.+..|+....++
T Consensus 10 k~i~ILGST-----GSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~~v~v~d~~~~~~L 73 (406)
T 1q0q_A 10 KQLTILGST-----GSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLL 73 (406)
T ss_dssp EEEEEETTT-----SHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHH
T ss_pred eeEEEEccC-----cHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHH
Confidence 345556654 6787 788888887 567766666777999999999999999999998775544
No 317
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.83 E-value=18 Score=21.65 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=15.1
Q ss_pred CCCCCCCCCceecCchhHHh
Q 015267 302 LPTDCRICGLQLVSSPHLAR 321 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLar 321 (410)
-|-.|+.|+..+....+|.+
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~ 27 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKS 27 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHH
Confidence 35577788888888887765
No 318
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.66 E-value=12 Score=23.98 Aligned_cols=25 Identities=28% Similarity=0.559 Sum_probs=21.5
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERTHA 36 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGGS
T ss_pred CeECCCCCcccCchHHHHHHHhHhc
Confidence 5999999999999888888877764
No 319
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.66 E-value=20 Score=25.97 Aligned_cols=22 Identities=23% Similarity=0.564 Sum_probs=15.6
Q ss_pred eeCCCCCcccccccchhhhccC
Q 015267 369 VACPKCKKHFCLECDIYIHESL 390 (410)
Q Consensus 369 ~~C~~C~~~FC~dCD~fiHe~L 390 (410)
|.|+.|+..|-..-++..|...
T Consensus 46 ~~C~~C~~~f~~~~~L~~H~~~ 67 (77)
T 2ct1_A 46 FHCPHCDTVIARKSDLGVHLRK 67 (77)
T ss_dssp EECSSSSCEESSHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHH
Confidence 6777787777777777666554
No 320
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.48 E-value=16 Score=22.17 Aligned_cols=19 Identities=21% Similarity=0.630 Sum_probs=13.1
Q ss_pred CCCCCCCCceecCc-hhHHh
Q 015267 303 PTDCRICGLQLVSS-PHLAR 321 (410)
Q Consensus 303 P~~C~~Cgl~Lvss-phLar 321 (410)
|-.|+.|+..+... .+|.+
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~ 28 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQR 28 (37)
T ss_dssp CEECSSSSCEECSSCHHHHH
T ss_pred CeECCCCChhhccCHHHHHH
Confidence 44566778888877 77765
No 321
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.39 E-value=12 Score=24.15 Aligned_cols=25 Identities=24% Similarity=0.607 Sum_probs=21.8
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRIHT 36 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTTTS
T ss_pred CccCCCCCCccCChHHHHHHHHHhC
Confidence 5999999999999999998987763
No 322
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.32 E-value=16 Score=23.67 Aligned_cols=25 Identities=28% Similarity=0.563 Sum_probs=22.0
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSVHS 36 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTTTT
T ss_pred ccCCCCCCcccCcHHHHHHHHHhcC
Confidence 5899999999999999999987774
No 323
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.27 E-value=13 Score=23.78 Aligned_cols=25 Identities=28% Similarity=0.517 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHHCC
T ss_pred CeECCCCCchhCCHHHHHHHhHhcC
Confidence 5999999999999988888877663
No 324
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.19 E-value=11 Score=24.01 Aligned_cols=25 Identities=24% Similarity=0.651 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRTHT 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHTT
T ss_pred CeECCCCCcccCCHhHHHHHHHHhC
Confidence 5999999999999999988877664
No 325
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.05 E-value=20 Score=22.93 Aligned_cols=24 Identities=25% Similarity=0.578 Sum_probs=18.1
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeeCCCCChhhCCHHHHHHHHHHh
Confidence 488888888888887777775443
No 326
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=32.73 E-value=69 Score=26.17 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCc---ccHHHHHHHHHHcCeEEEEEEcchhHH
Q 015267 158 NALDLVQGLLSQIPSYGHREVLILYSALSTCDP---GDIMETIQKCKESKIRCSVIGLSAEMF 217 (410)
Q Consensus 158 naL~~A~~~L~~~p~~~sreILVi~~S~~t~Dp---gdI~~ti~~akk~~IrV~vIgL~aE~~ 217 (410)
+|-.+--..+..+..+..+.+|+=++.....|. +-+..+++.++..|.++.++|+.+++.
T Consensus 26 ~a~~l~~~ll~~i~~~~~~~vIlDlsgV~~iDs~g~~~L~~~~~~~~l~G~~~~l~Gi~p~va 88 (123)
T 3zxn_A 26 SVIQFKEELLHNITGVAGKGLVIDISALEVVDEFVTRVLIEISRLAELLGLPFVLTGIKPAVA 88 (123)
T ss_dssp HHHHHHHHHHHHHTSSCCSEEEEECTTCSSCCHHHHHHHHHHHHHHHHHTCCEEEECCCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEcCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 333333333333322344556666787877887 456688999999999999999998874
No 327
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=32.68 E-value=16 Score=21.24 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=20.3
Q ss_pred eeCC--CCCcccccccchhhhccCCC
Q 015267 369 VACP--KCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 369 ~~C~--~C~~~FC~dCD~fiHe~Lh~ 392 (410)
|.|+ .|++.|=..-++-.|...|.
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~H~ 28 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRTHT 28 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred cCCcCCCCCcccCCHhHHHHHHHHhc
Confidence 7897 89999988888888887774
No 328
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.55 E-value=19 Score=22.47 Aligned_cols=21 Identities=19% Similarity=0.436 Sum_probs=16.1
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.|+..+....+|.+-
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H 29 (42)
T 2yte_A 9 KPYSCAECKETFSDNNRLVQH 29 (42)
T ss_dssp CSCBCTTTCCBCSSHHHHHHH
T ss_pred CCeECCCCCCccCCHHHHHHH
Confidence 355677889999888888764
No 329
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=32.45 E-value=27 Score=31.14 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=26.6
Q ss_pred CCCCceEEEEEeCCCCCC-cccHH-----HHHHHHHHcCeEEEEEEcch
Q 015267 172 SYGHREVLILYSALSTCD-PGDIM-----ETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 172 ~~~sreILVi~~S~~t~D-pgdI~-----~ti~~akk~~IrV~vIgL~a 214 (410)
-|++.+||||.||+.-.. ++... ..++.+++.+..|.++-|..
T Consensus 9 ~~~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~~~dL~~ 57 (204)
T 2amj_A 9 HHGSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADS 57 (204)
T ss_dssp ---CCEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ccCCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 378889999999998432 23333 33555666699999999975
No 330
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=32.35 E-value=52 Score=28.06 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=27.5
Q ss_pred CCceEEEEEeCCCCCCcccHH-HHHHHHHHcCeEEEEEEcch
Q 015267 174 GHREVLILYSALSTCDPGDIM-ETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 174 ~sreILVi~~S~~t~DpgdI~-~ti~~akk~~IrV~vIgL~a 214 (410)
..++|+|+++|.+-+.. .+- ..++.+++.++.|.++.+..
T Consensus 3 ~~~kv~IvY~S~~GnT~-~iA~~ia~~l~~~g~~v~~~~~~~ 43 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSD-RLAQAIINGITKTGVGVDVVDLGA 43 (159)
T ss_dssp CCCEEEEEECTTSTTHH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEEECCChHHH-HHHHHHHHHHHHCCCeEEEEECcC
Confidence 35679999998853222 233 33566778899999998874
No 331
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.33 E-value=14 Score=23.82 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTTTS
T ss_pred CeECCCCCcccCChhHHHHHhHhcC
Confidence 5899999999999999999987774
No 332
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=32.25 E-value=27 Score=28.84 Aligned_cols=27 Identities=22% Similarity=0.454 Sum_probs=19.6
Q ss_pred ceeeCCCCCcccccccchhhhccCC-CCCCCCCC
Q 015267 367 LYVACPKCKKHFCLECDIYIHESLH-NCPGCESL 399 (410)
Q Consensus 367 ~~~~C~~C~~~FC~dCD~fiHe~Lh-~CPgC~~~ 399 (410)
..|+|..|+..|=.+ +-.- .||.|.+.
T Consensus 72 ~~~~C~~CG~~~e~~------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC------CCCCCcCccccCC
Confidence 478899999887663 3345 69999764
No 333
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.22 E-value=15 Score=23.49 Aligned_cols=25 Identities=28% Similarity=0.588 Sum_probs=21.5
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKTHA 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGGGC
T ss_pred CeECCCCCCccCCHHHHHHHHHHcC
Confidence 5999999999999888888877764
No 334
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=32.09 E-value=18 Score=24.46 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=22.5
Q ss_pred eeeCCCCCcccccccchhhhcc-CC------CCCCCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHES-LH------NCPGCES 398 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~-Lh------~CPgC~~ 398 (410)
.|.|+.|++.|-..-++-.|.. .| .|+.|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k 49 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCC
Confidence 5888888888888777777753 44 5777753
No 335
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.00 E-value=17 Score=23.35 Aligned_cols=25 Identities=24% Similarity=0.596 Sum_probs=22.0
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRIHT 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHcC
Confidence 5999999999999999999987764
No 336
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=31.94 E-value=17 Score=26.54 Aligned_cols=48 Identities=19% Similarity=0.375 Sum_probs=34.4
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
...|.-|...+.+ ..+.---|++. ||.+|..-+.+.-..||.|-....
T Consensus 8 ~~~C~IC~~~~~~------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 8 IEPCVICQGRPKN------GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GSCCTTTSSSCSC------EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred cCCCCcCCCCCCC------EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 4579999855532 12322258988 899999888887788999976543
No 337
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=31.86 E-value=48 Score=33.24 Aligned_cols=52 Identities=23% Similarity=0.411 Sum_probs=35.9
Q ss_pred CCCCccccccccccCCCCCCCceeeCC--CCCcccccccchhhhcc-----------CCCCCCCCCC
Q 015267 346 RSRSTCFGCQQSLLSSGNKPGLYVACP--KCKKHFCLECDIYIHES-----------LHNCPGCESL 399 (410)
Q Consensus 346 ~~~~~C~~C~~~~~~~~~~~~~~~~C~--~C~~~FC~dCD~fiHe~-----------Lh~CPgC~~~ 399 (410)
.+...|.-|...+...+ ......|. .|++.|=..|=.-=-.+ ...||.|...
T Consensus 306 e~~~ECaICys~~l~~g--~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGG--EVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CSCCSCSSSCCSSCTTC--CCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cCCccCcccceeecCCC--CCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 35678999998776422 12246687 89999999997433333 2579999763
No 338
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.85 E-value=15 Score=23.75 Aligned_cols=25 Identities=24% Similarity=0.588 Sum_probs=21.6
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRVHT 36 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGGGT
T ss_pred CCCCCCCCcccCCHHHHHHHHHhcC
Confidence 5899999999999999888877763
No 339
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.79 E-value=14 Score=28.80 Aligned_cols=47 Identities=26% Similarity=0.564 Sum_probs=30.9
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccch-hhh----cc---CCCCCC--CCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIH----ES---LHNCPG--CESL 399 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-fiH----e~---Lh~CPg--C~~~ 399 (410)
...|.-|.-.++.+ ..+.-..|++.||.+|=. |+. +. --.||. |...
T Consensus 5 ~~~C~IC~~~~~~~-----~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVE-----QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGG-----GEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccc-----cceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 44799998776532 234555799999999942 322 22 237999 8765
No 340
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.75 E-value=12 Score=23.12 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=20.5
Q ss_pred eeeCCCCCcccccccchhhh-ccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIH-ESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiH-e~Lh~ 392 (410)
.|.|+.|++.|-..-++-.| ...|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 59999999999888888888 66553
No 341
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.63 E-value=15 Score=21.40 Aligned_cols=25 Identities=28% Similarity=0.557 Sum_probs=20.3
Q ss_pred eeeCC--CCCcccccccchhhhccCCC
Q 015267 368 YVACP--KCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~--~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+ .|++.|=..-++-.|...|.
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~ 29 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSHQ 29 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence 47898 89999988888888877663
No 342
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.42 E-value=33 Score=25.20 Aligned_cols=35 Identities=26% Similarity=0.623 Sum_probs=25.8
Q ss_pred CCccccccccccCCCCCCCceeeCCC--CCcccccccch
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPK--CKKHFCLECDI 384 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~--C~~~FC~dCD~ 384 (410)
...|..|...+...++= ..-.|.. |+..||.-|-.
T Consensus 6 ~k~CP~C~~~Iek~~GC--nhmtC~~~~C~~~FCw~C~~ 42 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGGC--NHMVCRNQNCKAEFCWVCLG 42 (60)
T ss_dssp CCCCTTTCCCCSSCCSC--CSSSCCSSGGGSCCSSSSCS
T ss_pred ceECcCCCCeeEeCCCC--CcEEECCCCcCCEEeeCcCC
Confidence 45799999888654321 2346988 99999999974
No 343
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.40 E-value=17 Score=23.41 Aligned_cols=25 Identities=24% Similarity=0.675 Sum_probs=22.1
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRIHT 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCcCCcccCCHHHHHHHHHHhC
Confidence 5999999999999999999987774
No 344
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=31.39 E-value=37 Score=27.66 Aligned_cols=71 Identities=15% Similarity=0.324 Sum_probs=43.4
Q ss_pred CCCCCCC--CCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCcccc--ccccccCCCC---------CCCc
Q 015267 302 LPTDCRI--CGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFG--CQQSLLSSGN---------KPGL 367 (410)
Q Consensus 302 lP~~C~~--Cgl~LvssphLarsyh-HlfPl~~f~~v~~~~~~~~~~~~~~~C~~--C~~~~~~~~~---------~~~~ 367 (410)
-|-.|++ |+..+.+...|.+-.- |. .. ....|.- |.+.|..... ....
T Consensus 66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~ 127 (155)
T 2gli_A 66 KPHKCTFEGCRKSYSRLENLKTHLRSHT-GE-----------------KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127 (155)
T ss_dssp CCCCCCSTTCCCCCSSHHHHHHHHHHTT-TC-----------------CCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred CCccCCCCCCCCcccCHHHHHHHHHHcC-CC-----------------CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence 3556764 8888888877765421 21 01 1235775 8888865431 1223
Q ss_pred eeeCCC--CCcccccccchhhhccC
Q 015267 368 YVACPK--CKKHFCLECDIYIHESL 390 (410)
Q Consensus 368 ~~~C~~--C~~~FC~dCD~fiHe~L 390 (410)
.|.|+. |+..|=..=++-.|...
T Consensus 128 ~~~C~~~~C~~~f~~~~~L~~H~~~ 152 (155)
T 2gli_A 128 PYVCKLPGCTKRYTDPSSLRKHVKT 152 (155)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCccccCCHHHHHHHHHh
Confidence 599987 99998766666666543
No 345
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.37 E-value=13 Score=23.74 Aligned_cols=25 Identities=24% Similarity=0.455 Sum_probs=21.6
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKTHS 36 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTTSS
T ss_pred CeeCCCCCCccCCHHHHHHHHHHcC
Confidence 5899999999999999888887763
No 346
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.34 E-value=16 Score=23.55 Aligned_cols=25 Identities=24% Similarity=0.568 Sum_probs=22.0
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVIHT 36 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTTTC
T ss_pred CeECCcCChhhCCHHHHHHHHHHhC
Confidence 5899999999999999999987774
No 347
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=31.26 E-value=20 Score=35.19 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=24.3
Q ss_pred eeEcCCCCcccccC--CCCCCCCCceecCchh
Q 015267 289 GYTCPRCKARVCEL--PTDCRICGLQLVSSPH 318 (410)
Q Consensus 289 GY~Cp~C~s~~C~l--P~~C~~Cgl~Lvssph 318 (410)
-..||-|+|+|..- -..|++|++.-|-.+.
T Consensus 278 ~v~Cp~cgA~y~~~~kG~lC~vC~l~~IG~~~ 309 (320)
T 3mkr_B 278 VEKCPLSGACYSPEFKGQICKVTTVTEIGKDV 309 (320)
T ss_dssp CEECTTTCCEECGGGTTSBCTTTSSBBSSCCC
T ss_pred CccCCCCCCeechhhCCCCCCCCcCcccCCcc
Confidence 45899999999865 5799999998876543
No 348
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=31.22 E-value=29 Score=27.58 Aligned_cols=39 Identities=38% Similarity=0.805 Sum_probs=28.0
Q ss_pred CCCcccc--ccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 347 SRSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 347 ~~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
....|.. |.+.-. ..|.|..|+..||.+ -=+..-|.||+
T Consensus 24 ~~~~C~~~~Ck~~~~-------l~f~C~~C~~~FC~~---HR~~e~H~C~~ 64 (86)
T 1wfe_A 24 KSYSCSFKGCTDVEL-------VAVICPYCEKNFCLR---HRHQSDHDCEK 64 (86)
T ss_dssp CCEECCSTTCCCEES-------SCEECTTTCCEECGG---GCSTGGGTCSS
T ss_pred CCCCCCCcCCCCCCc-------cceECCCCCcccccc---cCCccCCCCCC
Confidence 3557888 975421 358999999999986 22445699987
No 349
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=31.19 E-value=22 Score=26.50 Aligned_cols=41 Identities=20% Similarity=0.502 Sum_probs=29.1
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
..|.-|...+..+ .+ -.|++. ||.+|-.- +..||-|-....
T Consensus 25 ~~C~iC~~~~~~~------~~--~pCgH~~~C~~C~~~----~~~CP~Cr~~i~ 66 (74)
T 4ic3_A 25 KLCKICMDRNIAI------VF--VPCGHLVTCKQCAEA----VDKCPMCYTVIT 66 (74)
T ss_dssp TBCTTTSSSBCCE------EE--ETTCCBCCCHHHHTT----CSBCTTTCCBCS
T ss_pred CCCCCCCCCCCCE------EE--cCCCChhHHHHhhhc----CccCCCcCcCcc
Confidence 4799998666421 22 269999 99999553 389999976443
No 350
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.05 E-value=14 Score=23.81 Aligned_cols=25 Identities=24% Similarity=0.537 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRVHT 36 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGGGC
T ss_pred CeECCCCCcccCCHHHHHHHHHHcC
Confidence 5899999999999999988887764
No 351
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=30.77 E-value=13 Score=23.32 Aligned_cols=25 Identities=20% Similarity=0.426 Sum_probs=20.9
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~H~ 35 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRSCS 35 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTT
T ss_pred CeECCCCCcccCCHHHHHHHhhhcC
Confidence 5999999999998888888876663
No 352
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=30.61 E-value=65 Score=30.22 Aligned_cols=37 Identities=5% Similarity=-0.009 Sum_probs=30.5
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcch
Q 015267 176 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 176 reILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~a 214 (410)
++|+|+-|+. ++.||=.-++..|+..|..|.|+.++.
T Consensus 86 ~~vlVlcG~G--NNGGDGlv~AR~L~~~G~~V~v~~~~~ 122 (259)
T 3d3k_A 86 PTVALLCGPH--VKGAQGISCGRHLANHDVQVILFLPNF 122 (259)
T ss_dssp CEEEEEECSS--HHHHHHHHHHHHHHHTTCEEEEECCBC
T ss_pred CeEEEEECCC--CCHHHHHHHHHHHHHCCCeEEEEEecC
Confidence 4788888854 567888899999999999999987764
No 353
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.51 E-value=18 Score=23.23 Aligned_cols=24 Identities=25% Similarity=0.510 Sum_probs=16.9
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRTH 35 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHHH
T ss_pred CeECCCCCcccCchHHHHHHHHHc
Confidence 478888888887777776664433
No 354
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=30.27 E-value=98 Score=26.34 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=34.0
Q ss_pred ceEEEEEeCCCCC-CcccHH-HHHHHHHHcCeEEEEEEcchhH-HHHHHHHHhhCCeeEEeCCHHHHHHHHHhcCCCC
Q 015267 176 REVLILYSALSTC-DPGDIM-ETIQKCKESKIRCSVIGLSAEM-FICKHLCQDTGGSYSVALDESHFKELIMEHAPPP 250 (410)
Q Consensus 176 reILVi~~S~~t~-DpgdI~-~ti~~akk~~IrV~vIgL~aE~-~iLk~la~~TgG~Y~va~d~~hl~~lL~~~~~Pp 250 (410)
++|+++++..... .-.+++ .....++... .|.+.+-. +. ..++++++..+..+....|.+.+.+.+...+.|.
T Consensus 64 ~riivvf~~g~~s~r~k~~~~~~~~~~~~aD-~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~eai~~~~~~~~~g 139 (163)
T 3mvn_A 64 QRILAVLEPRSNTMKMGVHKHELATSLQDAD-SVFIYQPP-TIEWQVSEVLANLAQPAISADDVDELVMRIVQQAKPN 139 (163)
T ss_dssp SCEEEEECCC---------CHHHHHHHTTCS-EEEEECC-----CCHHHHHTTCCSCEEEESSHHHHHHHHHHHCCTT
T ss_pred CcEEEEECCCCcchhhHHHHHHHHHHHhcCC-EEEEECCC-CcccCHHHHHhhCCCCeEEECCHHHHHHHHHHhCCCC
Confidence 5788888643221 112333 3333333211 23333311 21 1256666655555666778777777777776553
No 355
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=30.25 E-value=13 Score=25.98 Aligned_cols=20 Identities=30% Similarity=0.600 Sum_probs=9.9
Q ss_pred eeeCCCCCcccccccchhhh
Q 015267 368 YVACPKCKKHFCLECDIYIH 387 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiH 387 (410)
.|.|+.|+..|-..-++..|
T Consensus 40 ~~~C~~C~k~f~~~~~L~~H 59 (66)
T 2drp_A 40 VYPCPFCFKEFTRKDNMTAH 59 (66)
T ss_dssp CEECTTTCCEESCHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHH
Confidence 45555555555444443333
No 356
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.88 E-value=19 Score=23.10 Aligned_cols=25 Identities=24% Similarity=0.675 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|=..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTTT
T ss_pred CeECCCCCchhCCHHHHHHHHHHcC
Confidence 5999999999999999988877763
No 357
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=29.79 E-value=16 Score=22.91 Aligned_cols=25 Identities=24% Similarity=0.478 Sum_probs=21.3
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|=..-++..|...|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRTHA 34 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGGC
T ss_pred CccCCCcChhhCCHHHHHHHHHhcC
Confidence 5999999999999888888877664
No 358
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.74 E-value=1.1e+02 Score=26.04 Aligned_cols=62 Identities=15% Similarity=0.207 Sum_probs=43.8
Q ss_pred CCCCcchHHHHHHHHHHHHhCCCCCCCceE-EEEEeCCCC----------CCcccHHHHHHHH-HHcCeEEEEEEcchh
Q 015267 149 GCSGDSSLQNALDLVQGLLSQIPSYGHREV-LILYSALST----------CDPGDIMETIQKC-KESKIRCSVIGLSAE 215 (410)
Q Consensus 149 ~~~G~~SLqnaL~~A~~~L~~~p~~~sreI-LVi~~S~~t----------~DpgdI~~ti~~a-kk~~IrV~vIgL~aE 215 (410)
.|-|...-.+||.+|...+..- -+| =|||-.+.. .|..|+.++.+.+ +..+|+++||.-++.
T Consensus 22 ~Pyg~~~a~~Al~~A~aala~g-----~eV~~VFf~~DGV~~a~~~q~p~~~~~~l~~~~~~La~~~gv~l~vC~~~a~ 95 (140)
T 2d1p_A 22 PAYGTQQASSAFQFAQALIADG-----HELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAAL 95 (140)
T ss_dssp CSSSSSHHHHHHHHHHHHHHTT-----CEEEEEEECGGGGGGGBTTCCCCTTSCCHHHHHHHHHHHHCCEEEEEHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHCC-----CccCEEEEechHHHHHhcCCCCccccCChHHHHHHHHHHcCCEEEEeHHHHH
Confidence 3678788999999999999862 267 555533322 1224677777777 899999999887654
No 359
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=29.65 E-value=9.9 Score=32.48 Aligned_cols=44 Identities=23% Similarity=0.622 Sum_probs=30.7
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhh-hccCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI-HESLHNCPGCES 398 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fi-He~Lh~CPgC~~ 398 (410)
....|.-|+..|..+ ++ ..|+..||..|=.-. ...-..||-|..
T Consensus 30 ~~~~C~IC~~~~~~p-------v~-~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~ 74 (141)
T 3knv_A 30 AKYLCSACRNVLRRP-------FQ-AQCGHRYCSFCLASILSSGPQNCAACVH 74 (141)
T ss_dssp GGGBCTTTCSBCSSE-------EE-CTTSCEEEHHHHHHHGGGSCEECHHHHH
T ss_pred cCcCCCCCChhhcCc-------EE-CCCCCccCHHHHHHHHhcCCCCCCCCCC
Confidence 355799999777542 34 379999999995433 333348999964
No 360
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.62 E-value=22 Score=22.41 Aligned_cols=21 Identities=29% Similarity=0.425 Sum_probs=16.4
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.||..+....+|.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (44)
T 2en7_A 11 KPYVCNECGKAFRSKSYLIIH 31 (44)
T ss_dssp SSSCCTTTCCCCSSHHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHHH
Confidence 355677899999999888764
No 361
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=29.58 E-value=19 Score=28.25 Aligned_cols=36 Identities=25% Similarity=0.541 Sum_probs=27.2
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhc
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE 388 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe 388 (410)
...|..|...+..+ .+..|..|+..||..|..-+|.
T Consensus 3 e~~C~~C~~~~~~~-----av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 3 KVLCQFCDQDPAQD-----AVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCBCTTCCSSSCCB-----CCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCcCCCCCCCCC-----ceEECCcCChHHhHHHCHHHhc
Confidence 45799998543211 2466999999999999998887
No 362
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=29.41 E-value=29 Score=26.97 Aligned_cols=38 Identities=32% Similarity=0.600 Sum_probs=27.7
Q ss_pred CCcccc--ccccccCCCCCCCceeeCCCCCcccccccchhhhccCCCCCC
Q 015267 348 RSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 395 (410)
Q Consensus 348 ~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPg 395 (410)
...|.. |.+.= -..|.|..|+..||.+ =-+-.-|.||+
T Consensus 14 g~~Cs~~~C~~~d-------flpf~C~~C~~~FC~~---HR~~e~H~C~~ 53 (75)
T 1wys_A 14 GQHCQVQHCRQRD-------FLPFVCDGCSGIFCLE---HRSKDSHGCSE 53 (75)
T ss_dssp CCCCSCTTTCCCS-------CCCEECTTTCCEECST---TCSSGGGTCCC
T ss_pred CCCcCcccCCCcc-------ceeeECcccCcCcCcc---cCCccccCCCC
Confidence 457888 97431 1369999999999986 33456799987
No 363
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.27 E-value=25 Score=22.64 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=19.4
Q ss_pred eeeCC--CCCcccccccchhhhccCC
Q 015267 368 YVACP--KCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~--~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+ .|++.|-..-++-.|...|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~H 37 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRSH 37 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTTS
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHh
Confidence 58887 8999888888888887666
No 364
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.16 E-value=19 Score=21.84 Aligned_cols=20 Identities=10% Similarity=0.375 Sum_probs=14.2
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.||..+....+|.+-
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H 28 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSH 28 (37)
T ss_dssp CCEETTTTEECSSHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHH
Confidence 45667788888887777653
No 365
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=29.09 E-value=1.5e+02 Score=30.57 Aligned_cols=59 Identities=14% Similarity=0.214 Sum_probs=47.4
Q ss_pred EEEEeCCCCCCcccHH-HHHHHHHH-----cCeEEEEEEcchhHHHHHHHHHhhCCeeEEeCCHHHHHHH
Q 015267 179 LILYSALSTCDPGDIM-ETIQKCKE-----SKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKEL 242 (410)
Q Consensus 179 LVi~~S~~t~DpgdI~-~ti~~akk-----~~IrV~vIgL~aE~~iLk~la~~TgG~Y~va~d~~hl~~l 242 (410)
|+|+||- |+|- +|++.+++ ++.+|..++-+..+..|.+.+.+.+=.|.+..|++...+|
T Consensus 80 I~ILGST-----GSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L 144 (488)
T 3au8_A 80 VAIFGST-----GSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEEL 144 (488)
T ss_dssp EEEETTT-----SHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEEEESCGGGTHHH
T ss_pred EEEEccC-----cHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHH
Confidence 5566654 5787 78888888 5788877777788999999999999999999998775544
No 366
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=28.90 E-value=2e+02 Score=22.39 Aligned_cols=49 Identities=8% Similarity=0.172 Sum_probs=35.2
Q ss_pred eEEEEEeCC---CCCCcccHHHHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhC
Q 015267 177 EVLILYSAL---STCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTG 227 (410)
Q Consensus 177 eILVi~~S~---~t~DpgdI~~ti~~akk~~IrV~vIgL~aE~~iLk~la~~Tg 227 (410)
+|+|++.+. ..| +.-..+...|++.+|....|-+..+..+.+++.+.+|
T Consensus 16 ~vvvy~~g~~~~~~C--p~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g 67 (109)
T 1wik_A 16 SVMLFMKGNKQEAKC--GFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSN 67 (109)
T ss_dssp SEEEEESSTTTCCCS--STHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHS
T ss_pred CEEEEEecCCCCCCC--chHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhC
Confidence 466555432 223 3456888889999999999999877677777777777
No 367
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.74 E-value=15 Score=23.63 Aligned_cols=25 Identities=24% Similarity=0.654 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAIHT 36 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTTSC
T ss_pred CeECCCCChhhCCHHHHHHHHHHhC
Confidence 5899999999999999988987774
No 368
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.68 E-value=15 Score=23.56 Aligned_cols=25 Identities=24% Similarity=0.642 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhccCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
.|.|+.|+..|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRIHT 36 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred CcCCCCCCchhCCHHHHHHHHHHhC
Confidence 5899999999999999888877663
No 369
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=28.58 E-value=24 Score=34.78 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=29.7
Q ss_pred ceeeeccCccc----cCeeEcCCCCcccccC--CCCCCCCCceecCch
Q 015267 276 SICSCHKEVKV----GVGYTCPRCKARVCEL--PTDCRICGLQLVSSP 317 (410)
Q Consensus 276 a~C~CH~~~~~----~~GY~Cp~C~s~~C~l--P~~C~~Cgl~Lvssp 317 (410)
.+=.|...++. ..--.||-|+|+|..- -..|++|++.-|-.+
T Consensus 270 ~F~iCa~s~tPIY~g~~~v~Cp~cgA~y~~~~kG~lC~vC~l~~IG~~ 317 (325)
T 3mv2_A 270 KFDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKIDRIAMISKIGAP 317 (325)
T ss_dssp CEEECTTTCCEEESSSCEEECTTTCCEEEGGGTTSBCSSSSCBBTTCC
T ss_pred CceeecCCcccccCCCCCccCCCCCCeechhhCCCCCCCCcCcccCCC
Confidence 34555565542 2145899999999865 579999999887543
No 370
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=28.07 E-value=23 Score=28.81 Aligned_cols=29 Identities=34% Similarity=0.931 Sum_probs=22.4
Q ss_pred CCccccccc-cccCCCCCCCceeeCCCCCc-cccccc
Q 015267 348 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKK-HFCLEC 382 (410)
Q Consensus 348 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~-~FC~dC 382 (410)
...|-+|.. ++. +.||.|..|.. .+|.+|
T Consensus 31 gv~Cd~C~~~pI~------G~RykC~~C~d~DLC~~C 61 (98)
T 2dip_A 31 GIPCNNCKQFPIE------GKCYKCTECIEYHLCQEC 61 (98)
T ss_dssp CCCCSSSCCSSCC------SCEEEESSSSSCEEEHHH
T ss_pred CCCCcCCCCCCcc------cCeEECCCCCCccHHHHH
Confidence 368999985 342 25899999966 489999
No 371
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=27.96 E-value=29 Score=26.11 Aligned_cols=26 Identities=35% Similarity=0.701 Sum_probs=20.3
Q ss_pred eeEcCCCCccccc---CCCCCCCCCceec
Q 015267 289 GYTCPRCKARVCE---LPTDCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s~~C~---lP~~C~~Cgl~Lv 314 (410)
-|+|..|+..+-- -+..|+-||-.++
T Consensus 21 ~Y~C~~Cg~~~~l~~~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 21 IYLCADCGARNTIQAKEVIRCRECGHRVM 49 (63)
T ss_dssp CCBCSSSCCBCCCCSSSCCCCSSSCCCCC
T ss_pred EEECCCCCCeeecCCCCceECCCCCcEEE
Confidence 7999999998753 2489999996553
No 372
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=27.89 E-value=28 Score=24.87 Aligned_cols=26 Identities=31% Similarity=0.939 Sum_probs=18.3
Q ss_pred eeEcCCCCccccc-----CC-CCCCCCCceec
Q 015267 289 GYTCPRCKARVCE-----LP-TDCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s~~C~-----lP-~~C~~Cgl~Lv 314 (410)
-|.|=+|+.-|-. || +.||.||-..+
T Consensus 3 iY~C~rCg~~fs~~el~~lP~IrCpyCGyrii 34 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVLPGVRCPYCGYKII 34 (48)
T ss_dssp --CCCCTTTTCCCCCSCCCSSSCCTTTCCSCE
T ss_pred EEEeeccCCCccHHHHhhCCCcccCccCcEEE
Confidence 4889999987763 45 58999997654
No 373
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=27.86 E-value=1e+02 Score=25.26 Aligned_cols=64 Identities=13% Similarity=0.129 Sum_probs=42.9
Q ss_pred CCCCcchHHHHHHHHHHHHhCCCCCCCceE-EEEEeCCCC----------CCcccHHHHHHHH-HHcCeEEEEEEcchhH
Q 015267 149 GCSGDSSLQNALDLVQGLLSQIPSYGHREV-LILYSALST----------CDPGDIMETIQKC-KESKIRCSVIGLSAEM 216 (410)
Q Consensus 149 ~~~G~~SLqnaL~~A~~~L~~~p~~~sreI-LVi~~S~~t----------~DpgdI~~ti~~a-kk~~IrV~vIgL~aE~ 216 (410)
.|-|.....+||..|...+..- .+| -|||-.+.. .+..++.+..+.+ ++.+|+|++++-+++.
T Consensus 10 ~p~~~~~~~~al~~a~a~~~~g-----~~v~~vff~~dGV~~~~~~~~p~~~~~~l~~~~~~L~~~~gv~l~vC~~~~~~ 84 (130)
T 2hy5_A 10 GPYQHQASDSAYQFAKAALEKG-----HEIFRVFFYHDGVNNSTRLTTPPQDDRHIVNRWAELAEQYELDMVVCVAAAQR 84 (130)
T ss_dssp CTTTSTHHHHHHHHHHHHHHTT-----CEEEEEEECGGGGGGGBSCCCCCTTSCCHHHHHHHHHHHHTCCEEEEHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHhcC-----CeeCEEEEechHHHHHhcCCCCCcccCCHHHHHHHHHHHcCCeEEEeHHHHHH
Confidence 3567778999999999998862 255 555532322 1224677777777 5559999999987664
Q ss_pred H
Q 015267 217 F 217 (410)
Q Consensus 217 ~ 217 (410)
+
T Consensus 85 R 85 (130)
T 2hy5_A 85 R 85 (130)
T ss_dssp H
T ss_pred c
Confidence 3
No 374
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=27.84 E-value=14 Score=26.84 Aligned_cols=66 Identities=17% Similarity=0.168 Sum_probs=37.9
Q ss_pred CC--CCCCceecCchhHHhh--hcccCCCCCCcccCccCCCCCCCCCCCcccc--ccccccCCCC------CCCceeeCC
Q 015267 305 DC--RICGLQLVSSPHLARS--YHHLFPIAPFDEVTPLCLNDPRNRSRSTCFG--CQQSLLSSGN------KPGLYVACP 372 (410)
Q Consensus 305 ~C--~~Cgl~LvssphLars--yhHlfPl~~f~~v~~~~~~~~~~~~~~~C~~--C~~~~~~~~~------~~~~~~~C~ 372 (410)
.| +.||..+.+...|.+- .|+- - ....|.- |.+.|..... .-. .|.|+
T Consensus 3 ~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~C~ 62 (85)
T 2j7j_A 3 VCHFENCGKAFKKHNQLKVHQFSHTQ--Q-----------------LPYECPHEGCDKRFSLPSRLKRHEKVHA-GYPCK 62 (85)
T ss_dssp ECCSTTCCCEESSHHHHHHHHHHHHT--T-----------------CCEECCSTTCCCEESSHHHHHHHHHHHH-SEECC
T ss_pred cCCCCCCCcccCCHHHHHHHHHHhCC--C-----------------CCeeCCCCCCcCccCCHHHHHHHHHHhC-CCCCC
Confidence 46 6788888887777653 2221 1 1234744 8877754320 001 18888
Q ss_pred C---CCcccccccchhhhccC
Q 015267 373 K---CKKHFCLECDIYIHESL 390 (410)
Q Consensus 373 ~---C~~~FC~dCD~fiHe~L 390 (410)
. |+..|=..=++..|...
T Consensus 63 ~~~~C~~~f~~~~~l~~H~~~ 83 (85)
T 2j7j_A 63 KDDSCSFVGKTWTLYLKHVAE 83 (85)
T ss_dssp SCSSCCCEESSHHHHHHHHHH
T ss_pred CCCCCCCccCCHHHHHHHHHh
Confidence 8 88887665555555443
No 375
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.66 E-value=11 Score=23.77 Aligned_cols=24 Identities=21% Similarity=0.452 Sum_probs=20.1
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|++.|-..-++..|...|
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H 34 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVLIH 34 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTHHH
T ss_pred CEeCCCcChhhCCHHHHHHHHHHc
Confidence 599999999999888888886554
No 376
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=27.51 E-value=20 Score=23.34 Aligned_cols=22 Identities=23% Similarity=0.403 Sum_probs=17.2
Q ss_pred cCCCCCCCCCceecCchhHHhh
Q 015267 301 ELPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 301 ~lP~~C~~Cgl~LvssphLars 322 (410)
+=|-.|+.||..+...-+|.|-
T Consensus 6 ekp~~C~~CgK~F~~~s~L~~H 27 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSPSTLEAH 27 (36)
T ss_dssp CCCCEETTTTEECSCHHHHHHH
T ss_pred ccCeECCCCCCccCCHhHccCc
Confidence 3466788899999998888764
No 377
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=27.50 E-value=43 Score=26.65 Aligned_cols=51 Identities=10% Similarity=-0.247 Sum_probs=33.7
Q ss_pred CCccccccccccCCCCCCCceeeCCCCC-cccccccchhhhccCCCCCCCCCCCCCCCcc
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCK-KHFCLECDIYIHESLHNCPGCESLRHSNPIV 406 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~-~~FC~dCD~fiHe~Lh~CPgC~~~~~~~~~~ 406 (410)
.-.|.-|+..|.++ . ...|+ +.||..|=.-.-+.-..||.|........++
T Consensus 22 ~~~CpI~~~~m~dP-------V-~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~ 73 (98)
T 1wgm_A 22 EFLDPIMSTLMCDP-------V-VLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIR 73 (98)
T ss_dssp TTBCTTTCSBCSSE-------E-ECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSE
T ss_pred hcCCcCccccccCC-------e-ECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhce
Confidence 55799998777654 1 23578 9999999533323357899998754443433
No 378
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=27.11 E-value=1.7e+02 Score=27.41 Aligned_cols=69 Identities=13% Similarity=0.194 Sum_probs=46.4
Q ss_pred eEEEEEeCCC-C-CCcccHHHHHHHHHH----cCeEEEEEEcchhH--HHHHHHHHhhCCeeEEe--CCHHHHHHHHHh
Q 015267 177 EVLILYSALS-T-CDPGDIMETIQKCKE----SKIRCSVIGLSAEM--FICKHLCQDTGGSYSVA--LDESHFKELIME 245 (410)
Q Consensus 177 eILVi~~S~~-t-~DpgdI~~ti~~akk----~~IrV~vIgL~aE~--~iLk~la~~TgG~Y~va--~d~~hl~~lL~~ 245 (410)
.+|+++|... . -+...+.+++..+++ .++++.++|=+.+. ..++++++..|...... .+.+.+.++|..
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHH
Confidence 4666667665 2 233344477777766 68999999988776 78999998888543333 366677777743
No 379
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=27.00 E-value=12 Score=35.18 Aligned_cols=31 Identities=26% Similarity=0.579 Sum_probs=20.3
Q ss_pred CCccccccccccCCC----CCCCceeeCCCCCccc
Q 015267 348 RSTCFGCQQSLLSSG----NKPGLYVACPKCKKHF 378 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~----~~~~~~~~C~~C~~~F 378 (410)
.+.|.||...+|... ........||.|+.+.
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRIL 232 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEE
T ss_pred CCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeE
Confidence 568999999887431 0112357788888753
No 380
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.97 E-value=28 Score=26.78 Aligned_cols=31 Identities=26% Similarity=0.589 Sum_probs=26.8
Q ss_pred eeeCCCCCcccccccchhhhccCC------CCCCCCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH------NCPGCES 398 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh------~CPgC~~ 398 (410)
.|.|+.|+..|=..-++-.|...| .|+.|..
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~ 73 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK 73 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCC
T ss_pred CccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcc
Confidence 499999999999999999998777 5888864
No 381
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=26.80 E-value=31 Score=32.16 Aligned_cols=43 Identities=26% Similarity=0.644 Sum_probs=31.3
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccch-h-hhccCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-Y-IHESLHNCPGCES 398 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-f-iHe~Lh~CPgC~~ 398 (410)
..|..|...+.. ..+|+.|+..|=..|=- | -+..-+.||.|..
T Consensus 181 ~~C~iC~~iv~~-------g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 181 KICNICHSLLIQ-------GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CBCTTTCSBCSS-------CEECSSSCCEECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CcCcchhhHHhC-------CcccCccChHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 479999866642 37899999888888853 2 2334569999976
No 382
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=26.60 E-value=25 Score=28.13 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=20.8
Q ss_pred eEcCCCCcccc-----cCCCCCCCCCceecCc
Q 015267 290 YTCPRCKARVC-----ELPTDCRICGLQLVSS 316 (410)
Q Consensus 290 Y~Cp~C~s~~C-----~lP~~C~~Cgl~Lvss 316 (410)
-.||-|..+.- ..++.|..||.+|.-+
T Consensus 37 VkCp~C~~~~~VFShA~t~V~C~~CgtvL~~P 68 (86)
T 3iz6_X 37 VKCQGCFNITTVFSHSQTVVVCPGCQTVLCQP 68 (86)
T ss_dssp EECTTTCCEEEEETTCSSCCCCSSSCCCCSCC
T ss_pred EECCCCCCeeEEEecCCcEEEccCCCCEeecC
Confidence 36999998754 4458999999998654
No 383
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.35 E-value=18 Score=27.29 Aligned_cols=27 Identities=30% Similarity=0.651 Sum_probs=20.3
Q ss_pred EcCCCCcccc-----cCCCCCCCCCceecCch
Q 015267 291 TCPRCKARVC-----ELPTDCRICGLQLVSSP 317 (410)
Q Consensus 291 ~Cp~C~s~~C-----~lP~~C~~Cgl~Lvssp 317 (410)
.||-|..+.- ..++.|..||.+|.-++
T Consensus 17 kCp~C~~~q~VFSha~t~V~C~~Cgt~L~~PT 48 (63)
T 3j20_W 17 KCIDCGNEQIVFSHPATKVRCLICGATLVEPT 48 (63)
T ss_dssp ECSSSCCEEEEESSCSSCEECSSSCCEEEECC
T ss_pred ECCCCCCeeEEEecCCeEEEccCcCCEEecCC
Confidence 5999987654 34578999999987543
No 384
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=26.14 E-value=68 Score=31.68 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=31.4
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchhHHH
Q 015267 176 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFI 218 (410)
Q Consensus 176 reILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE~~i 218 (410)
+-||+|+. ..|=|-.|+.-+++.|+..+|+|..|-++-++.+
T Consensus 95 ~GvL~ivk-NYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~ 136 (336)
T 2iu4_A 95 KGVFVIIK-NFEADLKEFNEAIKEARTEGIDVRYIVSHDDISV 136 (336)
T ss_dssp SCEEEEEE-SCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCHH
T ss_pred CCEEEEeC-CcHHHhhcHHHHHHHHHhCCCcEEEEEecCceec
Confidence 45999988 4443444444779999999999999999876543
No 385
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=26.02 E-value=30 Score=26.15 Aligned_cols=28 Identities=21% Similarity=0.565 Sum_probs=23.9
Q ss_pred eeEcCCCCcccccCCCCCCCCCceecCc
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQLVSS 316 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~Lvss 316 (410)
++.||.|....=-.-..|-+|++.+-++
T Consensus 8 ~W~CP~CTf~N~p~~p~CEmC~~prp~~ 35 (64)
T 3b08_B 8 GWQCPGCTFINKPTRPGCEMCCRARPET 35 (64)
T ss_dssp SEECTTTCCEECTTCSBCTTTCCBCCSS
T ss_pred CCcCCCccccCCCCCCccCcCCCCCCcc
Confidence 7999999988877778999999987554
No 386
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.81 E-value=30 Score=22.03 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=16.0
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.||..+.....|.+-
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eov_A 11 KPYKCSDCGKSFTWKSRLRIH 31 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHH
T ss_pred CCccCCccChhhCCHHHHHHH
Confidence 356677889999888888763
No 387
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.73 E-value=25 Score=22.51 Aligned_cols=20 Identities=30% Similarity=0.670 Sum_probs=14.7
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKH 31 (46)
T ss_dssp SEECSSSCCEESSSHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHH
Confidence 44566788888888888654
No 388
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=25.17 E-value=82 Score=28.62 Aligned_cols=39 Identities=21% Similarity=0.323 Sum_probs=28.6
Q ss_pred ceEEEEEeCCCCCC-cccHH-HHHHHHHHcCeEEEEEEcch
Q 015267 176 REVLILYSALSTCD-PGDIM-ETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 176 reILVi~~S~~t~D-pgdI~-~ti~~akk~~IrV~vIgL~a 214 (410)
.+||||.||+.... ...+. .+++.+++.+..|.++-|..
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~ 42 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYA 42 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEETTT
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEhhh
Confidence 47999999997521 12233 44777888899999999975
No 389
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=25.14 E-value=1.1e+02 Score=28.31 Aligned_cols=70 Identities=10% Similarity=0.123 Sum_probs=38.1
Q ss_pred EeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEE
Q 015267 129 CLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCS 208 (410)
Q Consensus 129 ~ls~ltgn~~~~i~~L~~~~~~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~ 208 (410)
.+.|+||..... | ..+.+|+++|...++....-.-|+|=+++- ++.+||..-.+.++.|...+..+=
T Consensus 12 ~~~plsG~~a~~-----------G-~~~~~g~~lAv~~iN~~GGi~Gr~ielv~~-D~~~~p~~a~~~a~~li~~~~v~~ 78 (353)
T 4gnr_A 12 FNFEESGSLAAY-----------G-TAEQKGAQLAVDEINAAGGIDGKQIEVVDK-DNKSETAEAASVTTNLVTQSKVSA 78 (353)
T ss_dssp EEECCSSTTHHH-----------H-HHHHHHHHHHHHHHHHTTCBTTBEEEEEEE-ECTTCHHHHHHHHHHHHHTSCCSE
T ss_pred EEeCCcCchhHh-----------H-HHHHHHHHHHHHHHHhcCCCCCeEEEEEEe-cCCCCHHHHHHHHHHHHhhCCceE
Confidence 356778764433 1 345667788887776543323355544444 444566555555666555543333
Q ss_pred EEE
Q 015267 209 VIG 211 (410)
Q Consensus 209 vIg 211 (410)
+||
T Consensus 79 i~g 81 (353)
T 4gnr_A 79 VVG 81 (353)
T ss_dssp EEC
T ss_pred Eec
Confidence 344
No 390
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.09 E-value=31 Score=21.85 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=15.8
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.|+..+....+|.+-
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (44)
T 2eou_A 11 TTSECQECGKIFRHSSLLIEH 31 (44)
T ss_dssp CCCCCTTTCCCCSSHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHH
Confidence 355677888888888888654
No 391
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=24.82 E-value=48 Score=27.17 Aligned_cols=64 Identities=16% Similarity=0.263 Sum_probs=38.9
Q ss_pred eEEEE-EeCCCCCCcccHHHHHHHHHHcCeEEEEEEcch----hHHHHHHHHHhhCCeeEEeCCH-HHHHHHHH
Q 015267 177 EVLIL-YSALSTCDPGDIMETIQKCKESKIRCSVIGLSA----EMFICKHLCQDTGGSYSVALDE-SHFKELIM 244 (410)
Q Consensus 177 eILVi-~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~a----E~~iLk~la~~TgG~Y~va~d~-~hl~~lL~ 244 (410)
+++|+ +||. .+...++++.|++.||+|.+|.+.. ....+.++++.++-...+=.+. ..|-.++.
T Consensus 15 dv~iv~~Gs~----~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~~G~l~~~i~ 84 (118)
T 3ju3_A 15 DITFVTWGSQ----KGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNYTAQAAQMIK 84 (118)
T ss_dssp SEEEEEEGGG----HHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCCCCCHHHHHH
T ss_pred CEEEEEECcc----HHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCCCCcHHHHHH
Confidence 45555 4433 3567788999999999999999863 2344556665555444333332 34444443
No 392
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.82 E-value=32 Score=22.03 Aligned_cols=21 Identities=24% Similarity=0.621 Sum_probs=16.4
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eoh_A 11 KPYECKECRKTFIQIGHLNQH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCcCCCCcCchhCCHHHHHHH
Confidence 355678899999998888764
No 393
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=24.50 E-value=1.4e+02 Score=23.58 Aligned_cols=51 Identities=20% Similarity=0.105 Sum_probs=35.3
Q ss_pred CCceEEEEEeCCCCCCcccHH---HHHHHHHH-cCeEEEEEEcchhHHHHHHHHHhhC
Q 015267 174 GHREVLILYSALSTCDPGDIM---ETIQKCKE-SKIRCSVIGLSAEMFICKHLCQDTG 227 (410)
Q Consensus 174 ~sreILVi~~S~~t~DpgdI~---~ti~~akk-~~IrV~vIgL~aE~~iLk~la~~Tg 227 (410)
+.+.|++=++.....|..-+. ...+.+++ .|+++.++++..++. ++-+.||
T Consensus 47 ~~~~vvlDls~v~~iDSsGl~~L~~~~~~~~~~~g~~l~l~~~~~~v~---~~l~~~g 101 (121)
T 3t6o_A 47 QPRKVLIDLEGVEFFGSSFIELLVRGWKRIKEDQQGVFALCSVSPYCV---EVLQVTH 101 (121)
T ss_dssp SSCEEEEECTTCCEECHHHHHHHHHHHHHHTTSTTCEEEEESCCHHHH---HHHTTCS
T ss_pred CCCeEEEECCCCCEEcHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH---HHHHHhC
Confidence 455666667766667764443 66788888 999999999987653 4444444
No 394
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=24.45 E-value=14 Score=26.92 Aligned_cols=27 Identities=33% Similarity=0.637 Sum_probs=16.9
Q ss_pred eeEcCCCCcccc--c--CCCCCCCCCceecC
Q 015267 289 GYTCPRCKARVC--E--LPTDCRICGLQLVS 315 (410)
Q Consensus 289 GY~Cp~C~s~~C--~--lP~~C~~Cgl~Lvs 315 (410)
-.+||.|++..= . ---.|..||.+...
T Consensus 18 ~~fCPkCG~~~~ma~~~dr~~C~kCgyt~~~ 48 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAEHADRYSCGRCGYTEFK 48 (55)
T ss_dssp SCCCTTTTTTCCCEECSSEEECTTTCCCEEC
T ss_pred cccCcCCCCceeEeccCCEEECCCCCCEEEe
Confidence 578888887431 1 12368888877543
No 395
>3lfj_A Manxb, phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component...; manxb PTS; 1.56A {Thermoanaerobacter tengcongensis}
Probab=24.41 E-value=1.3e+02 Score=27.07 Aligned_cols=65 Identities=12% Similarity=0.199 Sum_probs=38.0
Q ss_pred HHHHHhhhcCCCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcch
Q 015267 140 HIKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 140 ~i~~L~~~~~~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~a 214 (410)
+.+.+.+...|.|-..---.++-|...++. +.+...+|+||+.++ ..+..|.+.++.+.-|.+|.
T Consensus 63 ~~k~~lkmA~P~gvk~~i~sve~ai~~~~~-~~~~~~~v~il~k~p---------~d~~~lve~Gv~i~~vNvG~ 127 (187)
T 3lfj_A 63 FMKNIYTMAAPPGVKVKVFGVDAALKEWSQ-KTSVEEKVFLLFKNI---------DTCKRVMDGGLPITTLNIGG 127 (187)
T ss_dssp HHHHHHHHTSCTTCCEEEECHHHHHHHHHS-BCSSCEEEEEEESSH---------HHHHHHHHTTCCCSEEEEEE
T ss_pred HHHHHHHHhccCCCeEEEEEHHHHHHHHhC-CccCCceEEEEECCH---------HHHHHHHHcCCCCCEEEECC
Confidence 334443333466632212234555566665 345667899998744 23456677898888888875
No 396
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=24.33 E-value=28 Score=23.73 Aligned_cols=11 Identities=27% Similarity=0.739 Sum_probs=8.9
Q ss_pred eeEcCCCCccc
Q 015267 289 GYTCPRCKARV 299 (410)
Q Consensus 289 GY~Cp~C~s~~ 299 (410)
.|.||+|+..+
T Consensus 9 ~~~C~~C~~~i 19 (39)
T 2i5o_A 9 QVPCEKCGSLV 19 (39)
T ss_dssp EEECTTTCCEE
T ss_pred CcccccccCcC
Confidence 78999998764
No 397
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=24.30 E-value=30 Score=25.65 Aligned_cols=21 Identities=33% Similarity=0.903 Sum_probs=15.8
Q ss_pred eeEcCCCCcccccCC-CCCCCCCc
Q 015267 289 GYTCPRCKARVCELP-TDCRICGL 311 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP-~~C~~Cgl 311 (410)
--.||+|+.. .+| -.|+.||.
T Consensus 30 l~~c~~cG~~--~~pH~vc~~CG~ 51 (60)
T 2zjr_Z 30 LTECPQCHGK--KLSHHICPNCGY 51 (60)
T ss_dssp CEECTTTCCE--ECTTBCCTTTCB
T ss_pred ceECCCCCCE--eCCceEcCCCCc
Confidence 3478888888 566 67888884
No 398
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=24.17 E-value=21 Score=28.28 Aligned_cols=26 Identities=19% Similarity=0.634 Sum_probs=17.8
Q ss_pred eeEcCCCCcccccCC----CCCCCCCceec
Q 015267 289 GYTCPRCKARVCELP----TDCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP----~~C~~Cgl~Lv 314 (410)
-|.||.|+...=.=| -.|+-||.++.
T Consensus 27 ~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 56 (83)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred cCcCCCCCCcceeccCCCeEECCCCCCEec
Confidence 699999998332222 36888998754
No 399
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=24.17 E-value=29 Score=25.36 Aligned_cols=25 Identities=32% Similarity=0.515 Sum_probs=16.0
Q ss_pred eEcCCCCcc--ccc---CCCCCCCCCceec
Q 015267 290 YTCPRCKAR--VCE---LPTDCRICGLQLV 314 (410)
Q Consensus 290 Y~Cp~C~s~--~C~---lP~~C~~Cgl~Lv 314 (410)
..||.|++. +=. =-..|..||+.|-
T Consensus 12 ~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 12 VTCPNHPDAILVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp CSBTTBSSSCCEECSSSCCEECTTTCCEEC
T ss_pred ccCcCCCCCceeEeCCCCeEEeCCCCCEEe
Confidence 468888762 111 1357899998863
No 400
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.07 E-value=1e+02 Score=23.42 Aligned_cols=44 Identities=27% Similarity=0.651 Sum_probs=32.4
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccch-hhhccC--CCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHESL--HNCPGCESL 399 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-fiHe~L--h~CPgC~~~ 399 (410)
...|..|...|.. ..+|+.|+..|=.+|=. ++ .+- ..||.|...
T Consensus 15 i~~C~IC~~~i~~-------g~~C~~C~h~fH~~Ci~kWl-~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLIQ-------GQSCETCGIRMHLPCVAKYF-QSNAEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCSS-------SEECSSSCCEECHHHHHHHS-TTCSSCCCTTTCSC
T ss_pred CCcCcchhhHccc-------CCccCCCCchhhHHHHHHHH-HhcCCCCCCCCcCc
Confidence 3579999988752 35799999999888864 33 333 799999863
No 401
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=24.05 E-value=23 Score=31.67 Aligned_cols=29 Identities=21% Similarity=0.413 Sum_probs=21.0
Q ss_pred ccccccccccCCCCCCCceeeCCCCCcccccccc
Q 015267 350 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECD 383 (410)
Q Consensus 350 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD 383 (410)
.|..|++++... ..+.|.|++|+.. .+|.
T Consensus 44 ACp~CnKKV~~~---~~g~~~CekC~~~--~~~~ 72 (172)
T 3u50_C 44 RCTCQGKSVLKY---HGDSFFCESCQQF--INPQ 72 (172)
T ss_dssp ECTTSCCCEEEE---TTTEEEETTTTEE--CCCE
T ss_pred hchhhCCEeeeC---CCCeEECCCCCCC--CCce
Confidence 588899888632 2357999999986 5544
No 402
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=24.05 E-value=1.8e+02 Score=23.12 Aligned_cols=51 Identities=8% Similarity=0.079 Sum_probs=36.1
Q ss_pred eEEEEEeCCCCCCcccHH--HHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhCC
Q 015267 177 EVLILYSALSTCDPGDIM--ETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGG 228 (410)
Q Consensus 177 eILVi~~S~~t~DpgdI~--~ti~~akk~~IrV~vIgL~aE~~iLk~la~~TgG 228 (410)
.|+|+.. .+...++--+ .+.+.|.+.+|....+-+..+..+.+.+.+.||.
T Consensus 17 ~Vvlf~k-g~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d~~~~~~l~~~~g~ 69 (111)
T 3zyw_A 17 PCMLFMK-GTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSW 69 (111)
T ss_dssp SEEEEES-BCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred CEEEEEe-cCCCCCcchhHHHHHHHHHHcCCCeEEEECcCCHHHHHHHHHHHCC
Confidence 4655543 2222344444 8888999999999999998877777888888873
No 403
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=23.94 E-value=61 Score=26.57 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=24.4
Q ss_pred eEEEEEeCCCCCCcccHH-HHHHHHHHcCeEEEEEEcch
Q 015267 177 EVLILYSALSTCDPGDIM-ETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 177 eILVi~~S~~t~DpgdI~-~ti~~akk~~IrV~vIgL~a 214 (410)
+|+|+++|.+-+. ..+- ...+.+.+.++.|.++.+..
T Consensus 3 ki~I~y~S~tGnT-~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 3 KVLIVFGSSTGNT-ESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp EEEEEEECSSSHH-HHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred eEEEEEECCCchH-HHHHHHHHHHHHhCCCeEEEEehhh
Confidence 6999999864322 1232 33556677889999988863
No 404
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.90 E-value=27 Score=22.44 Aligned_cols=20 Identities=25% Similarity=0.517 Sum_probs=14.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIH 31 (46)
T ss_dssp CEECSSSCCEESSHHHHHHH
T ss_pred CEECcccCCccCCHhHHHHH
Confidence 44566788888888888764
No 405
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=23.47 E-value=38 Score=26.14 Aligned_cols=26 Identities=19% Similarity=0.598 Sum_probs=18.1
Q ss_pred eeEcCCCCcccccCCC----CCCCCCceec
Q 015267 289 GYTCPRCKARVCELPT----DCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~----~C~~Cgl~Lv 314 (410)
-|.||.|+..-=.-.. .|.-|+.++.
T Consensus 26 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 26 RYDCSFCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp CBCCSSCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred CccCCCCCCceeEecCCCeEECCCCCCEEe
Confidence 6999999875322222 7999988764
No 406
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=23.44 E-value=1.3e+02 Score=24.34 Aligned_cols=65 Identities=14% Similarity=0.063 Sum_probs=37.6
Q ss_pred EEEEEeCCCCCCcccHHHHHHHHHH----cCeEEEEEEcchhHHHHHHHHHhhCCe-eEEeCCHHHHHHHHH
Q 015267 178 VLILYSALSTCDPGDIMETIQKCKE----SKIRCSVIGLSAEMFICKHLCQDTGGS-YSVALDESHFKELIM 244 (410)
Q Consensus 178 ILVi~~S~~t~DpgdI~~ti~~akk----~~IrV~vIgL~aE~~iLk~la~~TgG~-Y~va~d~~hl~~lL~ 244 (410)
+|+++|.... ..++...++.+++ .++++.++|=+.+..-++++++..|-. ++-..+.+.+.++|.
T Consensus 4 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~ 73 (166)
T 3qhp_A 4 KIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGFVNSNELLEILK 73 (166)
T ss_dssp EEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEECCCCCHHHHHHHHT
T ss_pred EEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEEeecCHHHHHHHHH
Confidence 4455555533 3345544444443 378888888877777788888777742 222223455555554
No 407
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.42 E-value=27 Score=22.35 Aligned_cols=20 Identities=30% Similarity=0.860 Sum_probs=15.0
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQH 31 (46)
T ss_dssp SEECSSSCCEESSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHH
Confidence 44566788888888888764
No 408
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=23.34 E-value=28 Score=22.38 Aligned_cols=20 Identities=35% Similarity=0.692 Sum_probs=14.6
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATH 31 (46)
T ss_dssp SEECSSSSCEESSHHHHHHH
T ss_pred CEECCCCCcccCCHHHHHHH
Confidence 34566788888888888764
No 409
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=23.07 E-value=40 Score=25.26 Aligned_cols=61 Identities=20% Similarity=0.396 Sum_probs=31.0
Q ss_pred cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhc---cCCCCCCCC
Q 015267 324 HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGCE 397 (410)
Q Consensus 324 hHlfPl~~f~~v~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~fiHe---~Lh~CPgC~ 397 (410)
||-|+..++-+-. ......+| -|.++.. ....-+|..|...|=..|--..-+ ....||.|.
T Consensus 2 ~~~~~~~~~~~~~-------~~~~~~~C-iC~~~~~-----~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~ 65 (68)
T 3o70_A 2 HHHHHHSSGRENL-------YFQGLVTC-FCMKPFA-----GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 65 (68)
T ss_dssp ------------C-------TTTTCCCS-TTCCCCT-----TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHH
T ss_pred cccccCCcccccC-------CCCCceEe-ECCCcCC-----CCCEEECCCCCccccccccCcCcccCCCcEECCCCC
Confidence 5556666665542 12346789 8886542 123568999999988888655443 345676664
No 410
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.99 E-value=28 Score=22.21 Aligned_cols=20 Identities=30% Similarity=0.600 Sum_probs=14.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIH 31 (46)
T ss_dssp CEECTTSCCEESSHHHHHHH
T ss_pred CeeccccCChhcCHHHHHHH
Confidence 44566788888888888764
No 411
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=22.95 E-value=6.1e+02 Score=26.15 Aligned_cols=89 Identities=11% Similarity=0.167 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCCceEEEEeeCCeeEEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHHhCC
Q 015267 91 PSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQI 170 (410)
Q Consensus 91 P~Rl~~~~~~l~~FV~~ffdqNPisqlGII~~~~g~Ae~ls~ltgn~~~~i~~L~~~~~~~G~~SLqnaL~~A~~~L~~~ 170 (410)
+++.+.+.+.+..|+++|+..+....+ ||++.+|. ++|+.. .+|...|.
T Consensus 303 ~~~~~~~~~~~~~~l~~~~~~~g~~~v-vvglSGGv--------------------------DSsv~a--~la~~alG-- 351 (590)
T 3n05_A 303 LDADEEVYSALVVGLRAYVAKNGFRSV-LIGLSGGI--------------------------DSALVA--AIACDALG-- 351 (590)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTCCCE-EEECCSSH--------------------------HHHHHH--HHHHHHHC--
T ss_pred CCcHHHHHHHHHHHHHHHHHHhCCCcE-EEEcCCCH--------------------------HHHHHH--HHHHHHhC--
Confidence 478889999999999999988765543 33443331 233322 23333332
Q ss_pred CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcch
Q 015267 171 PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 171 p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~a 214 (410)
..+|+.++-........++..+.+.+++.||+..+|.+..
T Consensus 352 ----~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~i~~ 391 (590)
T 3n05_A 352 ----AQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEP 391 (590)
T ss_dssp ----GGGEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECCSHH
T ss_pred ----cccEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEEChH
Confidence 1245544432222345677888889999999999998864
No 412
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=22.94 E-value=29 Score=27.52 Aligned_cols=27 Identities=22% Similarity=0.602 Sum_probs=20.8
Q ss_pred eEcCCCCcccc-----cCCCCCCCCCceecCc
Q 015267 290 YTCPRCKARVC-----ELPTDCRICGLQLVSS 316 (410)
Q Consensus 290 Y~Cp~C~s~~C-----~lP~~C~~Cgl~Lvss 316 (410)
-.||-|..+.- ..++.|.+||.+|.-+
T Consensus 35 VkCp~C~~~q~VFSha~t~V~C~~Cg~~L~~P 66 (82)
T 3u5c_b 35 VKCPGCLNITTVFSHAQTAVTCESCSTILCTP 66 (82)
T ss_dssp EECTTSCSCEEEESBCSSCCCCSSSCCCCEEC
T ss_pred EECCCCCCeeEEEecCCeEEEccccCCEEecc
Confidence 35999998654 4558999999998754
No 413
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=22.87 E-value=2.4e+02 Score=28.43 Aligned_cols=58 Identities=14% Similarity=0.171 Sum_probs=45.2
Q ss_pred EEEEeCCCCCCcccHH-HHHHHHHHc--CeEEEEEEc-chhHHHHHHHHHhhCCeeEEeCCHHHHHH
Q 015267 179 LILYSALSTCDPGDIM-ETIQKCKES--KIRCSVIGL-SAEMFICKHLCQDTGGSYSVALDESHFKE 241 (410)
Q Consensus 179 LVi~~S~~t~DpgdI~-~ti~~akk~--~IrV~vIgL-~aE~~iLk~la~~TgG~Y~va~d~~hl~~ 241 (410)
|+|+||- |+|- +|++.++++ +.+|..++- +..+..|.+.+.+.+=.|.+..|++...+
T Consensus 24 i~ILGST-----GSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~ 85 (398)
T 2y1e_A 24 VVVLGST-----GSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQR 85 (398)
T ss_dssp EEEESTT-----SHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHH
T ss_pred EEEEccC-----cHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhh
Confidence 5566654 6787 789998887 455555555 44899999999999999999999988765
No 414
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.63 E-value=38 Score=26.30 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=26.3
Q ss_pred Cccccccccc-cCCCC-------CCCceeeCCCCCcccccccchhhh-ccCC
Q 015267 349 STCFGCQQSL-LSSGN-------KPGLYVACPKCKKHFCLECDIYIH-ESLH 391 (410)
Q Consensus 349 ~~C~~C~~~~-~~~~~-------~~~~~~~C~~C~~~FC~dCD~fiH-e~Lh 391 (410)
..|--|.+.| ..... -....|.|+.|++.|-..-++-.| ...|
T Consensus 35 ~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H 86 (96)
T 2ctd_A 35 VSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANH 86 (96)
T ss_dssp EECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred cCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence 3577777777 43210 012247777777777777777777 6655
No 415
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=22.55 E-value=1.2e+02 Score=24.40 Aligned_cols=42 Identities=5% Similarity=-0.023 Sum_probs=30.7
Q ss_pred CceEEEEEeCCCCCCc---ccHHHHHHHHHHcCeEEEEEEcchhH
Q 015267 175 HREVLILYSALSTCDP---GDIMETIQKCKESKIRCSVIGLSAEM 216 (410)
Q Consensus 175 sreILVi~~S~~t~Dp---gdI~~ti~~akk~~IrV~vIgL~aE~ 216 (410)
.+.||+=++.....|. +-+..+.+.+++.|+++.++++...+
T Consensus 48 ~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v 92 (130)
T 2kln_A 48 VEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDL 92 (130)
T ss_dssp CEEEEEECSCCSSSBCSTTTHHHHHHHHHHTTTEEEEEECCSSHH
T ss_pred ceEEEEECCCCChhhHHHHHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 3445555665555555 34558899999999999999998765
No 416
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=22.55 E-value=1.1e+02 Score=27.17 Aligned_cols=40 Identities=23% Similarity=0.294 Sum_probs=26.0
Q ss_pred ceEEEEEeCCCCCCc-ccHHHH-HH----HHHHc--CeEEEEEEcchh
Q 015267 176 REVLILYSALSTCDP-GDIMET-IQ----KCKES--KIRCSVIGLSAE 215 (410)
Q Consensus 176 reILVi~~S~~t~Dp-gdI~~t-i~----~akk~--~IrV~vIgL~aE 215 (410)
|+||+|.||+..... .-+.+. ++ .+++. ++.|.+|-|+..
T Consensus 12 ~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~ 59 (191)
T 3k1y_A 12 RTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSEL 59 (191)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGC
T ss_pred ceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhC
Confidence 789999999986222 122222 33 34444 899999999754
No 417
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=22.53 E-value=1.4e+02 Score=23.22 Aligned_cols=55 Identities=9% Similarity=0.122 Sum_probs=36.6
Q ss_pred CCCCCceEEEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhCC
Q 015267 171 PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGG 228 (410)
Q Consensus 171 p~~~sreILVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~aE~~iLk~la~~TgG 228 (410)
|..+.+.-|+||+... | ..=..+...|.+.+|....|-+..+....+++.+.++|
T Consensus 10 ~~~~~~~~v~vy~~~~-C--p~C~~ak~~L~~~~i~y~~idI~~~~~~~~~l~~~~~g 64 (99)
T 3qmx_A 10 HGSAVSAKIEIYTWST-C--PFCMRALALLKRKGVEFQEYCIDGDNEAREAMAARANG 64 (99)
T ss_dssp CCSCCCCCEEEEECTT-C--HHHHHHHHHHHHHTCCCEEEECTTCHHHHHHHHHHTTT
T ss_pred cCccCCCCEEEEEcCC-C--hhHHHHHHHHHHCCCCCEEEEcCCCHHHHHHHHHHhCC
Confidence 3333444455555343 3 23347778889999999999998776677778777744
No 418
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.43 E-value=38 Score=21.67 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=15.9
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTVH 31 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHHH
T ss_pred CCEECCccCcccCCHHHHHHH
Confidence 355677888888888888764
No 419
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=22.39 E-value=47 Score=27.34 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCCCCCceEEEEEeCCCC---CCcccHHHHHHHHHHcCeEEEEEEcchhHH
Q 015267 159 ALDLVQGLLSQIPSYGHREVLILYSALST---CDPGDIMETIQKCKESKIRCSVIGLSAEMF 217 (410)
Q Consensus 159 aL~~A~~~L~~~p~~~sreILVi~~S~~t---~DpgdI~~ti~~akk~~IrV~vIgL~aE~~ 217 (410)
+|..|..+++.- +. .+|-||+-+..+ ....++.+.++.+++.||.+.+|+-.++.+
T Consensus 26 al~~A~~a~~~G--~~-~eV~i~~~G~~v~L~~~~~~l~~~~~~~~~~Gv~~~aC~~Ca~~~ 84 (117)
T 2fb6_A 26 LAMYALNSKNRG--WW-KHINIILWGASVKLVANDTQVQTEILEMLQSGITIEACQDCCENF 84 (117)
T ss_dssp HHHHHHHHHHHT--SC-SEEEEEECSHHHHHHHHCHHHHHHHHHHHHHTCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHcC--CC-CcEEEEEECCeeeeccCCccHHHHHHHHHHcCCeEEEeHHHHHHc
Confidence 888888888752 11 367777654443 122467799999999999999999988753
No 420
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.18 E-value=39 Score=21.60 Aligned_cols=21 Identities=33% Similarity=0.599 Sum_probs=15.9
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2emz_A 11 RPFKCNECGKGFGRRSHLAGH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHH
Confidence 355677888888888888653
No 421
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=22.17 E-value=69 Score=26.11 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=22.8
Q ss_pred eEEEEEeCCCCCCcccHH-HHHHHHHHcCeEEEEEEcc
Q 015267 177 EVLILYSALSTCDPGDIM-ETIQKCKESKIRCSVIGLS 213 (410)
Q Consensus 177 eILVi~~S~~t~DpgdI~-~ti~~akk~~IrV~vIgL~ 213 (410)
+|+|+++|.+.+. ..+- ..++.+...++.|.++.+.
T Consensus 2 ki~iiy~S~~Gnt-~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 2 KALIVYGSTTGNT-EYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp EEEEEEECSSSHH-HHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred eEEEEEECCcCHH-HHHHHHHHHHHHhcCCeeEEEehh
Confidence 5899999885321 1222 2244566678888888775
No 422
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=22.13 E-value=22 Score=35.79 Aligned_cols=46 Identities=26% Similarity=0.459 Sum_probs=31.8
Q ss_pred CCCccccccccccCCCCCCCceeeCC--CCCcccccccchh----------hhccCCCCCCCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACP--KCKKHFCLECDIY----------IHESLHNCPGCESLR 400 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~--~C~~~FC~dCD~f----------iHe~Lh~CPgC~~~~ 400 (410)
...+|.-|- . ....+.|. .|...||.+|=.. ..+.--+|--|....
T Consensus 92 ~~~yCr~C~----~----Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 92 YQSYCSICC----S----GETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SBCSCTTTC----C----CSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CcccceEcC----C----CCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 356888886 2 22479999 9999999999521 223556788887543
No 423
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=22.05 E-value=45 Score=32.85 Aligned_cols=42 Identities=29% Similarity=0.618 Sum_probs=30.3
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
...|.-|+..+..+ .+ -.|++. ||..|-.- +..||-|-....
T Consensus 295 ~~~C~IC~~~~~~~------v~--lpCgH~~fC~~C~~~----~~~CP~CR~~i~ 337 (345)
T 3t6p_A 295 ERTCKVCMDKEVSV------VF--IPCGHLVVCQECAPS----LRKCPICRGIIK 337 (345)
T ss_dssp TCBCTTTSSSBCCE------EE--ETTCCEEECTTTGGG----CSBCTTTCCBCC
T ss_pred CCCCCccCCcCCce------EE--cCCCChhHhHHHHhc----CCcCCCCCCCcc
Confidence 45799999666432 22 269999 99999763 389999976443
No 424
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=22.03 E-value=89 Score=29.54 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=31.1
Q ss_pred CCCCceEEEEEeCCC------------CCCcccHHHHHHHHHHcCeEEEEEEcchh
Q 015267 172 SYGHREVLILYSALS------------TCDPGDIMETIQKCKESKIRCSVIGLSAE 215 (410)
Q Consensus 172 ~~~sreILVi~~S~~------------t~DpgdI~~ti~~akk~~IrV~vIgL~aE 215 (410)
..+.++||||+++-. .....++.-.++.+++.++.|.+++....
T Consensus 45 ~~g~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~ 100 (291)
T 1n57_A 45 YRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGL 100 (291)
T ss_dssp CCSSCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred cCCCCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 345578999988632 12333555668889999999999998653
No 425
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=21.98 E-value=2.4e+02 Score=20.65 Aligned_cols=63 Identities=19% Similarity=0.328 Sum_probs=39.8
Q ss_pred EEEEeCCCCCCcccHHHHHHHHHHcCeEEEEEEcch-----hHHHHHHHHHhhC----------CeeEEeCCHHHHHHHH
Q 015267 179 LILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA-----EMFICKHLCQDTG----------GSYSVALDESHFKELI 243 (410)
Q Consensus 179 LVi~~S~~t~DpgdI~~ti~~akk~~IrV~vIgL~a-----E~~iLk~la~~Tg----------G~Y~va~d~~hl~~lL 243 (410)
|+|++... |. .-..+...|++.+|....+-+.. ...+..++.+.+| |.+..-.|++.++++|
T Consensus 14 v~ly~~~~-Cp--~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~g~~i~G~~~~~l~~~l 90 (92)
T 3ic4_A 14 VLMYGLST-CP--HCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGDKHVLGYNEEKLKELI 90 (92)
T ss_dssp SEEEECTT-CH--HHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEETTEEEESCCHHHHHHHH
T ss_pred EEEEECCC-Ch--HHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEECCEEEeCCCHHHHHHHh
Confidence 44555343 32 33467778888899999988872 2344566666554 6666666777777766
Q ss_pred H
Q 015267 244 M 244 (410)
Q Consensus 244 ~ 244 (410)
.
T Consensus 91 ~ 91 (92)
T 3ic4_A 91 R 91 (92)
T ss_dssp H
T ss_pred c
Confidence 3
No 426
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=21.95 E-value=27 Score=26.50 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=14.2
Q ss_pred eEcCCCCcccccCCC----CCCCCCce
Q 015267 290 YTCPRCKARVCELPT----DCRICGLQ 312 (410)
Q Consensus 290 Y~Cp~C~s~~C~lP~----~C~~Cgl~ 312 (410)
.+||+|++..-.... .|+.||+.
T Consensus 11 L~CP~ck~~L~~~~~~g~LvC~~c~~~ 37 (67)
T 2jny_A 11 LACPKDKGPLRYLESEQLLVNERLNLA 37 (67)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTTEE
T ss_pred hCCCCCCCcCeEeCCCCEEEcCCCCcc
Confidence 578888875433322 47777655
No 427
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=21.81 E-value=17 Score=24.60 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=20.1
Q ss_pred eeeCCCCCcccccccchhhhccCC
Q 015267 368 YVACPKCKKHFCLECDIYIHESLH 391 (410)
Q Consensus 368 ~~~C~~C~~~FC~dCD~fiHe~Lh 391 (410)
.|.|+.|+..|-..-++-.|...|
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~H 47 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLELR 47 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 599999999998888888887655
No 428
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=21.80 E-value=19 Score=29.49 Aligned_cols=34 Identities=24% Similarity=0.712 Sum_probs=28.5
Q ss_pred CcceeeeccCccccCeeEcCCCCcccccCCCCCCCCCcee
Q 015267 274 SISICSCHKEVKVGVGYTCPRCKARVCELPTDCRICGLQL 313 (410)
Q Consensus 274 ~~a~C~CH~~~~~~~GY~Cp~C~s~~C~lP~~C~~Cgl~L 313 (410)
..++-.||. .|.|=.|++..=...-.|++|+-.|
T Consensus 38 ~k~LV~C~d------HYLCl~CLtlmL~~SdrCpIC~~pL 71 (99)
T 2ko5_A 38 NKGLVECNN------HYLCLNCLTLLLSVSNRCPICKMPL 71 (99)
T ss_dssp CSSEEECSS------CEEEHHHHHHTCSSSSEETTTTEEC
T ss_pred cCCeeeecc------hhhHHHHHHHHHhhccCCcccCCcC
Confidence 345666663 8999999999999999999999875
No 429
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=21.74 E-value=60 Score=27.86 Aligned_cols=39 Identities=13% Similarity=0.232 Sum_probs=26.2
Q ss_pred ceEEEEEeCCCCCCcccHH-HHHHHHHHcCeEEEEEEcchh
Q 015267 176 REVLILYSALSTCDPGDIM-ETIQKCKESKIRCSVIGLSAE 215 (410)
Q Consensus 176 reILVi~~S~~t~DpgdI~-~ti~~akk~~IrV~vIgL~aE 215 (410)
.+||||++|.+.+ ...+- ..++.+++.++.|.++.+...
T Consensus 6 ~kilii~~S~~g~-T~~la~~i~~~l~~~g~~v~~~~l~~~ 45 (200)
T 2a5l_A 6 PYILVLYYSRHGA-TAEMARQIARGVEQGGFEARVRTVPAV 45 (200)
T ss_dssp CEEEEEECCSSSH-HHHHHHHHHHHHHHTTCEEEEEBCCCE
T ss_pred ceEEEEEeCCCCh-HHHHHHHHHHHHhhCCCEEEEEEhhhc
Confidence 3699999997321 11222 335667778999999999753
No 430
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=21.73 E-value=2.1e+02 Score=22.71 Aligned_cols=65 Identities=20% Similarity=0.279 Sum_probs=41.2
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCCcccH---HHHHHHHHHcCeEEEEEEcchhHH
Q 015267 150 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDI---METIQKCKESKIRCSVIGLSAEMF 217 (410)
Q Consensus 150 ~~G~~SLqnaL~~A~~~L~~~p~~~sreILVi~~S~~t~DpgdI---~~ti~~akk~~IrV~vIgL~aE~~ 217 (410)
.+|.-.++++=.+-....... ...+.|++=++.....|..-+ .+..+.+++ |+++.++++...+.
T Consensus 23 l~G~L~f~~a~~l~~~l~~~~--~~~~~vilDl~~v~~iDssgl~~L~~~~~~~~~-g~~l~l~~~~~~v~ 90 (118)
T 3ny7_A 23 VIGPLFFAAAEGLFTDLESRL--EGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPE-GCELRVCNVEFQPL 90 (118)
T ss_dssp EESCBCHHHHHHHHHHHHTTC--TTCSEEEEEEEECCCBCHHHHHHHHHHHHHCCT-TCEEEEECCCHHHH
T ss_pred EeceeEehhHHHHHHHHHHhc--CCCcEEEEEcCCCCeecHHHHHHHHHHHHHHHC-CCEEEEecCCHHHH
Confidence 456666666544333322222 234556666777776776544 377888888 99999999987653
No 431
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=21.72 E-value=59 Score=20.85 Aligned_cols=24 Identities=17% Similarity=0.509 Sum_probs=20.5
Q ss_pred eeEcCCCCcccccCCCCCCCCCce
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~ 312 (410)
++.||.|....-..-..|.+|+..
T Consensus 8 ~W~C~~CT~~N~~~~~~Ce~C~~~ 31 (34)
T 3a9j_C 8 QWNCTACTFLNHPALIRCEQCEMP 31 (34)
T ss_dssp CEECTTTCCEECTTCSBCTTTCCB
T ss_pred cCCCCCCccccCCCCCeeCCCCCc
Confidence 789999998887777899999864
No 432
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=21.64 E-value=46 Score=27.12 Aligned_cols=15 Identities=33% Similarity=0.957 Sum_probs=11.4
Q ss_pred eeEcCCCCcccccCCCCCCCCCc
Q 015267 289 GYTCPRCKARVCELPTDCRICGL 311 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl 311 (410)
.+.||.|. .|.+|+.
T Consensus 55 ~W~C~~C~--------~C~vC~~ 69 (112)
T 3v43_A 55 RWQCIECK--------TCSSCRD 69 (112)
T ss_dssp CCCCTTTC--------CBTTTCC
T ss_pred ccccccCC--------ccccccC
Confidence 78899987 4667774
No 433
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=21.58 E-value=28 Score=29.36 Aligned_cols=26 Identities=23% Similarity=0.584 Sum_probs=18.3
Q ss_pred eeEcCCCCc----ccccCCCCCCCCCceec
Q 015267 289 GYTCPRCKA----RVCELPTDCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s----~~C~lP~~C~~Cgl~Lv 314 (410)
-|.||.|+. +...---.|+-|+.++.
T Consensus 60 kytCPfCGk~~vKR~avGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 60 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 89 (116)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred CCcCCCCCCceeEecCceeEECCCCCCEEE
Confidence 799999987 22222246999998864
No 434
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=21.54 E-value=67 Score=28.04 Aligned_cols=39 Identities=5% Similarity=0.117 Sum_probs=27.1
Q ss_pred ceEEEEEeCCCCCCcccHH-HHHHHHHHcCeEEEEEEcchh
Q 015267 176 REVLILYSALSTCDPGDIM-ETIQKCKESKIRCSVIGLSAE 215 (410)
Q Consensus 176 reILVi~~S~~t~DpgdI~-~ti~~akk~~IrV~vIgL~aE 215 (410)
.+||||++|+..+ ...+- ..++.+++.++.|.++-|...
T Consensus 7 mkilii~~S~~g~-T~~la~~i~~~l~~~g~~v~~~~l~~~ 46 (211)
T 1ydg_A 7 VKLAIVFYSSTGT-GYAMAQEAAEAGRAAGAEVRLLKVRET 46 (211)
T ss_dssp CEEEEEECCSSSH-HHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CeEEEEEECCCCh-HHHHHHHHHHHHhcCCCEEEEEecccc
Confidence 4799999998322 12233 335667778999999999765
No 435
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.47 E-value=26 Score=26.00 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=22.7
Q ss_pred ceeeCCCCCcccccccchhhhccCCC
Q 015267 367 LYVACPKCKKHFCLECDIYIHESLHN 392 (410)
Q Consensus 367 ~~~~C~~C~~~FC~dCD~fiHe~Lh~ 392 (410)
..|.|+.|++.|-..-.+..|...|.
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~Ht 37 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQHG 37 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred cCcCCCCCCCccCCHHHHHhhhhhhC
Confidence 46999999999999999999988874
No 436
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=21.42 E-value=25 Score=27.78 Aligned_cols=27 Identities=19% Similarity=0.492 Sum_probs=21.1
Q ss_pred EcCCCCcccc-----cCCCCCCCCCceecCch
Q 015267 291 TCPRCKARVC-----ELPTDCRICGLQLVSSP 317 (410)
Q Consensus 291 ~Cp~C~s~~C-----~lP~~C~~Cgl~Lvssp 317 (410)
.||.|..+.- .-++.|..||.+|+-++
T Consensus 34 kCp~C~n~q~VFShA~t~V~C~~Cg~~L~~PT 65 (81)
T 2xzm_6 34 KCAQCQNIQMIFSNAQSTIICEKCSAILCKPT 65 (81)
T ss_dssp ECSSSCCEEEEETTCSSCEECSSSCCEEEEEC
T ss_pred ECCCCCCeeEEEecCccEEEccCCCCEEeecC
Confidence 6999998754 44579999999997553
No 437
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.40 E-value=27 Score=22.13 Aligned_cols=20 Identities=30% Similarity=0.615 Sum_probs=14.4
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRH 31 (44)
T ss_dssp CEEETTTTEEESSSHHHHTT
T ss_pred CeECcccCcccCCHHHHHHH
Confidence 34566788888888888754
No 438
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=21.39 E-value=58 Score=29.01 Aligned_cols=39 Identities=15% Similarity=0.322 Sum_probs=27.6
Q ss_pred CceEEEEEeCCCCCCc-ccHHHHHHHHHHcCeEEEEEEcc
Q 015267 175 HREVLILYSALSTCDP-GDIMETIQKCKESKIRCSVIGLS 213 (410)
Q Consensus 175 sreILVi~~S~~t~Dp-gdI~~ti~~akk~~IrV~vIgL~ 213 (410)
.|.|+||.||+...-. .-+.+.+..+.+.++.|.+|-|+
T Consensus 2 ~k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~ 41 (190)
T 3u7r_A 2 VKTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIG 41 (190)
T ss_dssp CEEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGG
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecc
Confidence 4679999999875222 23445666666789999999885
No 439
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.39 E-value=41 Score=21.54 Aligned_cols=21 Identities=14% Similarity=0.409 Sum_probs=16.3
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 015267 302 LPTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 302 lP~~C~~Cgl~LvssphLars 322 (410)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2eom_A 11 RGHRCSDCGKFFLQASNFIQH 31 (46)
T ss_dssp SSCCCSSSCCCCSSHHHHHHH
T ss_pred CCcCCCCCCCeeCChHHHHHH
Confidence 356788899999988888764
No 440
>2xoc_A E3 ubiquitin-protein ligase CHFR; zinc-binding, poly(ADP-ribose) mitosis, antephase checkpoint, cell cycle; HET: PGE ADP ADE; 1.89A {Homo sapiens} PDB: 2xoy_A* 2xoz_A* 2xp0_A
Probab=21.29 E-value=38 Score=32.33 Aligned_cols=48 Identities=23% Similarity=0.544 Sum_probs=33.9
Q ss_pred CCccccccccccCCC-----CCCCceeeCCCCCcccccccchhhhccCCCCCCCCC
Q 015267 348 RSTCFGCQQSLLSSG-----NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 398 (410)
Q Consensus 348 ~~~C~~C~~~~~~~~-----~~~~~~~~C~~C~~~FC~dCD~fiHe~Lh~CPgC~~ 398 (410)
...|..|...+|... .......+|..|+..|| .+|.+..-..|.||.+
T Consensus 79 H~~C~~C~~~MP~R~~~~~~~~~~~pq~C~iC~r~FC---~lYw~c~~~~c~g~L~ 131 (261)
T 2xoc_A 79 HALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFC---HLYWGCTRTGCYGCLA 131 (261)
T ss_dssp EEECTTTCCEEECCHHHHHTCTTSCCCBCTTTCCBCC---HHHHCCCCTTCSCSEE
T ss_pred CcCcCcccCcCCCCCccccccCCCCCCCCCCcCcccc---CcccccCCCCCccccc
Confidence 346999998888631 11234578999999997 4677666677778864
No 441
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=21.12 E-value=2.2e+02 Score=22.28 Aligned_cols=51 Identities=10% Similarity=0.069 Sum_probs=36.3
Q ss_pred eEEEEEeCCCCCCcccHH--HHHHHHHHcCeEEEEEEcchhHHHHHHHHHhhCC
Q 015267 177 EVLILYSALSTCDPGDIM--ETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGG 228 (410)
Q Consensus 177 eILVi~~S~~t~DpgdI~--~ti~~akk~~IrV~vIgL~aE~~iLk~la~~TgG 228 (410)
+|+|+..+ +...|+--+ .+.+.|.+.+|....|-+.....+.+.+.+.||.
T Consensus 19 ~Vvvy~k~-t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~ 71 (109)
T 3ipz_A 19 KVVLFMKG-TRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNW 71 (109)
T ss_dssp SEEEEESB-CSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred CEEEEEec-CCCCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHHCC
Confidence 46655432 223355444 8888999999999999998777777788888773
No 442
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=20.81 E-value=27 Score=26.66 Aligned_cols=41 Identities=24% Similarity=0.579 Sum_probs=28.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 015267 349 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 401 (410)
Q Consensus 349 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-FC~dCD~fiHe~Lh~CPgC~~~~~ 401 (410)
..|.-|...+.. ..+ -.|++. ||.+|-.- +..||.|-....
T Consensus 19 ~~C~IC~~~~~~------~v~--~pCgH~~~C~~C~~~----~~~CP~Cr~~i~ 60 (79)
T 2yho_A 19 MLCMVCCEEEIN------STF--CPCGHTVCCESCAAQ----LQSCPVCRSRVE 60 (79)
T ss_dssp TBCTTTSSSBCC------EEE--ETTCBCCBCHHHHTT----CSBCTTTCCBCC
T ss_pred CEeEEeCcccCc------EEE--ECCCCHHHHHHHHHh----cCcCCCCCchhh
Confidence 468889755532 122 268888 99999763 459999976443
No 443
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=20.69 E-value=25 Score=33.74 Aligned_cols=48 Identities=19% Similarity=0.355 Sum_probs=33.8
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccch-hhhcc-CCCCCC--CCCCCC
Q 015267 347 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHES-LHNCPG--CESLRH 401 (410)
Q Consensus 347 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~FC~dCD~-fiHe~-Lh~CPg--C~~~~~ 401 (410)
.+..|.-|...|..| .....|++.||..|=. ++-+. -..||- |.....
T Consensus 180 ~el~CPIcl~~f~DP-------Vts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 180 IELTCPITCKPYEAP-------LISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp CCSBCTTTSSBCSSE-------EEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred eeeECcCccCcccCC-------eeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 456899999888654 3346899999999975 44332 247996 976433
No 444
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=20.41 E-value=2e+02 Score=27.73 Aligned_cols=39 Identities=3% Similarity=0.217 Sum_probs=25.4
Q ss_pred CceEEEEEeCCCCCCcccHH-HHHHHHHHcCeEEEEEEcch
Q 015267 175 HREVLILYSALSTCDPGDIM-ETIQKCKESKIRCSVIGLSA 214 (410)
Q Consensus 175 sreILVi~~S~~t~DpgdI~-~ti~~akk~~IrV~vIgL~a 214 (410)
.++|+|+++|.+.+. ..+- ..++.+.+.++.|.++.+..
T Consensus 256 ~~kv~iiy~S~~GnT-~~la~~i~~~l~~~g~~v~~~~l~~ 295 (414)
T 2q9u_A 256 QKKVTVVLDSMYGTT-HRMALALLDGARSTGCETVLLEMTS 295 (414)
T ss_dssp CSEEEEEECCSSSHH-HHHHHHHHHHHHHTTCEEEEEEGGG
T ss_pred CCeEEEEEECCCchH-HHHHHHHHHHHHhCCCeEEEEEcCc
Confidence 467999999874321 1222 33555666888899888853
No 445
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.38 E-value=27 Score=22.41 Aligned_cols=20 Identities=40% Similarity=0.894 Sum_probs=14.4
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQH 31 (46)
T ss_dssp SEEETTTTEEESSHHHHHHH
T ss_pred CeECcccChhhCCHHHHHHH
Confidence 34566788888888888764
No 446
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.17 E-value=43 Score=21.17 Aligned_cols=20 Identities=20% Similarity=0.399 Sum_probs=15.4
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H 29 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRH 29 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHH
T ss_pred CEECCCCCCeeCChHHHHHH
Confidence 45677888888888888764
No 447
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.12 E-value=35 Score=21.86 Aligned_cols=20 Identities=25% Similarity=0.559 Sum_probs=14.5
Q ss_pred CCCCCCCCceecCchhHHhh
Q 015267 303 PTDCRICGLQLVSSPHLARS 322 (410)
Q Consensus 303 P~~C~~Cgl~LvssphLars 322 (410)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICH 31 (46)
T ss_dssp SEECSSSCCEESSHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHH
Confidence 34566788888888888664
No 448
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.02 E-value=73 Score=22.90 Aligned_cols=27 Identities=19% Similarity=0.507 Sum_probs=23.9
Q ss_pred eeEcCCCCcccccCCCCCCCCCceecC
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQLVS 315 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~Lvs 315 (410)
++.||.|.-..=..-..|..|++..-.
T Consensus 11 ~W~C~~CT~~N~~~~~~C~~C~~pr~~ 37 (53)
T 2d9g_A 11 YWDCSVCTFRNSAEAFKCMMCDVRKGT 37 (53)
T ss_dssp CEECSSSCCEECSSCSSCSSSCCCCCC
T ss_pred CcCCCCCccCCCCCCCccCCCCCcCCc
Confidence 799999999988888999999998654
No 449
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=20.02 E-value=37 Score=24.49 Aligned_cols=26 Identities=23% Similarity=0.586 Sum_probs=22.1
Q ss_pred eeEcCCCCcccccCCCCCCCCCceec
Q 015267 289 GYTCPRCKARVCELPTDCRICGLQLV 314 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~~C~~Cgl~Lv 314 (410)
++.||.|....=-.-..|.+|++..-
T Consensus 10 ~W~Cp~CTf~N~p~~~~CemC~~prp 35 (52)
T 2crc_A 10 GWQCPGCTFINKPTRPGCEMCCRARP 35 (52)
T ss_dssp SBCCTTTCCCBCTTCSSCSSSCCCCC
T ss_pred CccCCCcccccCCCCCeeCCCCCcCC
Confidence 78999999887766789999999854
No 450
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=20.01 E-value=31 Score=26.34 Aligned_cols=24 Identities=29% Similarity=0.462 Sum_probs=15.2
Q ss_pred eeEcCCCCcccccCCC----CCCCCCce
Q 015267 289 GYTCPRCKARVCELPT----DCRICGLQ 312 (410)
Q Consensus 289 GY~Cp~C~s~~C~lP~----~C~~Cgl~ 312 (410)
-.+||+|++..-.-.. .|+.||+.
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (70)
T 2js4_A 8 ILVCPVCKGRLEFQRAQAELVCNADRLA 35 (70)
T ss_dssp CCBCTTTCCBEEEETTTTEEEETTTTEE
T ss_pred heECCCCCCcCEEeCCCCEEEcCCCCce
Confidence 3678888885443332 57777765
Done!