BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015268
(410 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 155/288 (53%), Gaps = 26/288 (9%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR---------------- 160
+N+Y +IG GSYG V L + D +YA+K K L +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 161 --VAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGF 217
+ P + V +E+ I+K L HPN+V L+EV+DDPN DH YMV E V +G
Sbjct: 72 GCIQP-RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 218 GQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE 277
+P + E AR Y +D++ G+ YLH ++H DIKP NLLV G +KI DF VS F+
Sbjct: 131 LKP--LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 278 DDNDVLRRSPGTPVFTAPECCLGL--TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDT 335
+ +L + GTP F APE + GKA D WA+GVTLY + GQ PF+ E +
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL 248
Query: 336 YDKIVNNSLVFPDA--MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ KI + +L FPD + +L++L+ +L K+P R+ + ++ H WV
Sbjct: 249 HSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 153/288 (53%), Gaps = 12/288 (4%)
Query: 105 LIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPS 164
+ + +G I Y+ +G G++GKV + + L G A+K ++ + L V
Sbjct: 3 MAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDV--- 59
Query: 165 ETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIG 224
+ +RRE+ +K+ +HP+I+ L +VI P+ +MV+EYV G D + G +
Sbjct: 60 ---VGKIRREIQNLKLFRHPHIIKLYQVISTPSD--IFMVMEYVSGGELFDYICKNGRLD 114
Query: 225 ESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR 284
E +R+ + I+SG+ Y H H VVH D+KP+N+L+ KI DF +S + D + LR
Sbjct: 115 EKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLR 173
Query: 285 RSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSL 344
S G+P + APE G Y G D W+ GV LY ++ G PF + + + KI +
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF 233
Query: 345 VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
P +NP + +LL+ +L DP +R T+ D+ +H W D +P+YL
Sbjct: 234 YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD---LPKYL 278
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 145/282 (51%), Gaps = 12/282 (4%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD 170
+G I YV +G G++GKV + L G A+K ++ + L V +
Sbjct: 4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDV------VGK 57
Query: 171 VRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK 230
++RE+ +K+ +HP+I+ L +VI P F+MV+EYV G D + G + E AR+
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTD--FFMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
+ I+S + Y H H VVH D+KP+N+L+ KI DF +S + D + LR S G+P
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSCGSP 174
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAM 350
+ APE G Y G D W+ GV LY ++ G PF E + + KI P+ +
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 234
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
N + LL +L DP +R T+ D+ +H W D +P YL
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD---LPSYL 273
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 145/282 (51%), Gaps = 12/282 (4%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD 170
+G I YV +G G++GKV + L G A+K ++ + L V +
Sbjct: 4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDV------VGK 57
Query: 171 VRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK 230
++RE+ +K+ +HP+I+ L +VI P F+MV+EYV G D + G + E AR+
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTD--FFMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
+ I+S + Y H H VVH D+KP+N+L+ KI DF +S + D + LR S G+P
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRDSCGSP 174
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAM 350
+ APE G Y G D W+ GV LY ++ G PF E + + KI P+ +
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 234
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
N + LL +L DP +R T+ D+ +H W D +P YL
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD---LPSYL 273
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 138/265 (52%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G+P + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPE 182
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P++R TL + K W+
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 138/265 (52%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G+P + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPE 182
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P++R TL + K W+
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A++ K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G+P + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDEFCGSPPYAAPE 182
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P++R TL + K W+
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G P + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDAFCGAPPYAAPE 182
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P++R TL + K W+
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A++ K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G+P + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPE 182
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P++R TL + K W+
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 138/265 (52%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 58
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIV 116
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G+P + APE
Sbjct: 117 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPE 175
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 235
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P++R TL + K W+
Sbjct: 236 LLKKFLILNPSKRGTLEQIMKDRWM 260
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L G+ AIK K+ L+ T++ + REV
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-------TSLQKLFREVR 63
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+++EY G D G + E AR R IV
Sbjct: 64 IMKILNHPNIVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 121
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F L G+P + APE
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDTFCGSPPYAAPE 180
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 240
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P +R TL + K W+
Sbjct: 241 LLKRFLVLNPIKRGTLEQIMKDRWI 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 135/265 (50%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L G+ AIK K+ L+ T++ + REV
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-------TSLQKLFREVR 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+++EY G D G + E AR R IV
Sbjct: 67 IMKILNHPNIVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 124
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F L G P + APE
Sbjct: 125 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDAFCGAPPYAAPE 183
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 243
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ L +P +R TL + K W+
Sbjct: 244 LLKRFLVLNPIKRGTLEQIMKDRWI 268
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y+ +G GS+GKV L + A+K + L K S+ M V RE+
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK-----SDMHMR-VEREIS 61
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+K+L+HP+I+ L +VI P MV+EY G+ D + + E R++ + I+
Sbjct: 62 YLKLLRHPHIIKLYDVITTPTD--IVMVIEYAGGEL-FDYIVEKKRMTEDEGRRFFQQII 118
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
+ Y H H +VH D+KP+NLL+ + VKI DF +S + D N L+ S G+P + APE
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPE 177
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W+ G+ LY M++G+ PF E + + + K+ + V PD ++P ++
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQS 237
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
L+ ++ DP +R+T+ ++ + W N +P YL
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWF---NVNLPDYL 270
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 67 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H H +VH D+KP+NLL+ VKI DF +S + D N L+ S G+P + APE
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPE 182
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W+ GV LY M+ + PF E++ + I N P ++P
Sbjct: 183 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAG 242
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
L++ +L +P R++++++ + W D +P+YL
Sbjct: 243 LIKRMLIVNPLNRISIHEIMQDDWFKVD---LPEYL 275
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 66 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H H +VH D+KP+NLL+ VKI DF +S + D N L+ S G+P + APE
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPE 181
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W+ GV LY M+ + PF E++ + I N P ++P
Sbjct: 182 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAG 241
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
L++ +L +P R++++++ + W D +P+YL
Sbjct: 242 LIKRMLIVNPLNRISIHEIMQDDWFKVD---LPEYL 274
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 56
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 57 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H H +VH D+KP+NLL+ VKI DF +S + D N L+ S G+P + APE
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPE 172
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W+ GV LY M+ + PF E++ + I N P ++P
Sbjct: 173 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAG 232
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
L++ +L +P R++++++ + W D +P+YL
Sbjct: 233 LIKRMLIVNPLNRISIHEIMQDDWFKVD---LPEYL 265
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 60
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 61 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H H +VH D+KP+NLL+ VKI DF +S + D N L+ S G+P + APE
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPE 176
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W+ GV LY M+ + PF E++ + I N P ++P
Sbjct: 177 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAG 236
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
L++ +L +P R++++++ + W D +P+YL
Sbjct: 237 LIKRMLIVNPLNRISIHEIMQDDWFKVD---LPEYL 269
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 10/264 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
I K+L HPNIV L EVI+ + Y+V EY G D G E AR R IV
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKT--LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV 123
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G P + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK-LDAFCGAPPYAAPE 182
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P + + N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCEN 242
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTW 380
LL+ L +P++R TL + K W
Sbjct: 243 LLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 142/278 (51%), Gaps = 9/278 (3%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
K+I +Y+ +G GSYGKV + LD + +A KLR P+ A +V++
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKV---KEVLDSETLCRRAVKILKKKKLRRIPNGEA--NVKK 55
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEY-VEGKWDNDGFGQPGAIGESMARKYL 232
E+ +++ L+H N++ L++V+ + YMV+EY V G + A Y
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFED--DNDVLRRSPGTP 290
++ GL YLH +VH DIKP NLL+ GT+KI V++ +D R S G+P
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 291 VFTAPECCLGL-TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA 349
F PE GL T+ G D W+ GVTLY + G YPF G+ + ++ I S P
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGD 235
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
P L +LL+G+L +P +R ++ + +H+W + P
Sbjct: 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP 273
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 138/277 (49%), Gaps = 29/277 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IGAG++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG----------EKIDENVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHGHNVVHGDIKPDNLLV--APSGTVKIGDFSVSQVFEDDNDVLRRSP----GTPV 291
G+ Y H V H D+K +N L+ +P+ +KI DF S+ VL P GTP
Sbjct: 127 GVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-----SVLHSQPKSAVGTPA 181
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNNSLVFP 347
+ APE L Y GK AD W+ GVTLY M++G YPF + + T +I+N P
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 348 D--AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
D ++PE R+L+ + DP +R+++ ++ H W L
Sbjct: 242 DYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 278
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 29/277 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIAANVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHGHNVVHGDIKPDNLLV--APSGTVKIGDFSVSQVFEDDNDVLRRSP----GTPV 291
G+ Y H V H D+K +N L+ +P+ +KI DF S+ + VL P GTP
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPA 181
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNNSLVFP 347
+ APE L Y GK AD W+ GVTLY M++G YPF + + T +I+N P
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 348 D--AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
D ++PE R+L+ + DP +R+++ ++ H W L
Sbjct: 242 DYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 278
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 10/265 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y + IG G++ KV L R L G+ A+K K+ L+ T++ + REV
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNP-------TSLQKLFREVR 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 67 IMKILNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 124
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + Y H +VH D+K +NLL+ +KI DF S F N L G+P + APE
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK-LDTFCGSPPYAAPE 183
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
G Y G D W++GV LY ++ G PF G+ L++ ++++ P M+ + N
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 243
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
LL+ LL +P +R +L + K W+
Sbjct: 244 LLKKLLVLNPIKRGSLEQIMKDRWM 268
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 29/277 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIDENVKREIIN 67
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 68 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 125
Query: 238 GLMYLHGHNVVHGDIKPDNLLV--APSGTVKIGDFSVSQVFEDDNDVLRRSP----GTPV 291
G+ Y H V H D+K +N L+ +P+ +KI DF S+ + VL P GTP
Sbjct: 126 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPA 180
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNNSLVFP 347
+ APE L Y GK AD W+ GVTLY M++G YPF + + T +I+N P
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 240
Query: 348 D--AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
D ++PE R+L+ + DP +R+++ ++ H W L
Sbjct: 241 DYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 29/277 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIDENVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHGHNVVHGDIKPDNLLV--APSGTVKIGDFSVSQVFEDDNDVLRRSP----GTPV 291
G+ Y H V H D+K +N L+ +P+ +KI F S+ + VL P GTP
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKSTVGTPA 181
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNNSLVFP 347
+ APE L Y GK AD W+ GVTLY M++G YPF + + T +I+N P
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 348 D--AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
D ++PE R+L+ + DP +R+++ ++ H W L
Sbjct: 242 DYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 278
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 29/277 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIDENVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHGHNVVHGDIKPDNLLV--APSGTVKIGDFSVSQVFEDDNDVLRRSP----GTPV 291
G+ Y H V H D+K +N L+ +P+ +KI F S+ + VL P GTP
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKDTVGTPA 181
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNNSLVFP 347
+ APE L Y GK AD W+ GVTLY M++G YPF + + T +I+N P
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 348 D--AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
D ++PE R+L+ + DP +R+++ ++ H W L
Sbjct: 242 DYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 278
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ IG GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +K+ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---AGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 143/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ +R +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I + + P +V L D + + YMVLEY G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----IQQAVNFPFLVKLEFSFKD--NSNLYMVLEYAPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +K+ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 16/273 (5%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPS----ETAMTDVRREV 175
Y VRK+G+G+YG+V+L + AIK KS K R + E ++ E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++K L HPNI+ L +V +D +FY+V E+ EG + E A ++ I
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKK--YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+SG+ YLH HN+VH DIKP+N+L+ + +KI DF +S F D LR GT +
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRLGTAYY 214
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----D 348
APE L Y K D W+ GV +Y ++ G PF G+ QD K+ F
Sbjct: 215 IAPE-VLKKKYNEK-CDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ E + L++ +L D +R T + W+
Sbjct: 273 NISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXLX---GTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYQMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 140/269 (52%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R GK YA K K LS R S ++ REV I++ ++HP
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE---EIEREVNILREIRHP 68
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
NI+ L ++ + N ++LE V G D + ++ E A ++L+ I+ G+ YLH
Sbjct: 69 NIITLHDIFE--NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P+ +K+ DF ++ E N+ + GTP F APE
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNY 185
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD---AMNPE 353
LGL AD W++GV Y ++ G PFLGET Q+T I + F + + E
Sbjct: 186 EPLGL-----EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL KDP RR+T+ +H+W+
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 36 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 95
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EYV G
Sbjct: 96 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 147
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 148 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 208 FAKRVKGATWTL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 263
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 264 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 317
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLK--QIEHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 2 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 61
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 62 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 113
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 114 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFG 173
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 174 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 229
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 230 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 283
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKW 296
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADE 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S L YLH +VV+ DIK +NL++ G +KI DF + + D ++ GTP + APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP ++PE ++
Sbjct: 176 VLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTWVLGDN 385
LL GLL KDP +RL +V +H + L N
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 62
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 63 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 118
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S L YLH +VV+ DIK +NL++ G +KI DF + + D ++ GTP + APE
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP ++PE ++
Sbjct: 179 VLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 237
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTWVLGDN 385
LL GLL KDP +RL +V +H + L N
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 271
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S L YLH +VV+ DIK +NL++ G +KI DF + + D ++ GTP + APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP ++PE ++
Sbjct: 176 VLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTWVLGDN 385
LL GLL KDP +RL +V +H + L N
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S L YLH +VV+ DIK +NL++ G +KI DF + + D ++ GTP + APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP ++PE ++
Sbjct: 176 VLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTWVLGDN 385
LL GLL KDP +RL +V +H + L N
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S L YLH +VV+ DIK +NL++ G +KI DF + + D ++ GTP + APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP ++PE ++
Sbjct: 176 VLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTWVLGDN 385
LL GLL KDP +RL +V +H + L N
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 25/297 (8%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ IG GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EY+ G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYMPG- 125
Query: 212 WDNDGFGQPGAIG---ESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIG 268
D F IG E AR Y IV YLH ++++ D+KP+NLL+ G +K+
Sbjct: 126 --GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183
Query: 269 DFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL 328
DF ++ + L GTP + APE L Y KA D WA+GV +Y M G PF
Sbjct: 184 DFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFF 239
Query: 329 GETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
+ Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 240 ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 64
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 65 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 120
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S L YLH +VV+ DIK +NL++ G +KI DF + + D ++ GTP + APE
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP ++PE ++
Sbjct: 181 VLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 239
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTWVLGDN 385
LL GLL KDP +RL +V +H + L N
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 273
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S L YLH +VV+ DIK +NL++ G +KI DF + + D ++ GTP + APE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP ++PE ++
Sbjct: 176 VLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTWVLGDN 385
LL GLL KDP +RL +V +H + L N
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 10 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 69
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 70 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 121
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 122 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 181
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 182 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 237
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 238 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 291
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 25/297 (8%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ IG GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EY+ G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYMPG- 125
Query: 212 WDNDGFGQPGAIG---ESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIG 268
D F IG E AR Y IV YLH ++++ D+KP+NLL+ G +K+
Sbjct: 126 --GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183
Query: 269 DFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL 328
DF ++ + L GTP + APE L Y KA D WA+GV +Y M G PF
Sbjct: 184 DFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFF 239
Query: 329 GETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
+ Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 240 ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 29/277 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R L + A+K + A E +V+RE++
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG------AAIDE----NVQREIIN 69
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +++EY G + G E AR + + ++S
Sbjct: 70 HRSLRHPNIVRFKEVILTPT--HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS 127
Query: 238 GLMYLHGHNVVHGDIKPDNLLV--APSGTVKIGDFSVSQVFEDDNDVLRRSP----GTPV 291
G+ Y H + H D+K +N L+ +P+ +KI DF S+ + VL P GTP
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPA 182
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQD---TYDKIVNNSLVFP 347
+ APE L Y GK AD W+ GVTLY M++G YPF E +D T +I++ P
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP 242
Query: 348 D--AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
D ++PE +L+ + DP R+++ ++ H+W L
Sbjct: 243 DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFL 279
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 36 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 95
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EYV G
Sbjct: 96 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 147
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 148 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 208 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 263
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 264 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 317
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKW 297
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPAFVAPEIVNY 191
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNP 352
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 192 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 246
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLK--QIEHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 36 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 95
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 96 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 147
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 148 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 208 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 263
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 264 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 317
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 8 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 67
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 68 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 119
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 120 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 180 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 235
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 236 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 289
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 1 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 60
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 61 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 112
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 113 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 172
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 173 FAKRVKGRTWTL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 228
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 229 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 282
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWTL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 142/272 (52%), Gaps = 25/272 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y V+K+G+G+YG+V+L R + AIK K+ +S ++ + + EV ++K
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-------SSNSKLLEEVAVLK 91
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
+L HPNI+ L + +D ++Y+V+E +G D E A ++ ++SG+
Sbjct: 92 LLDHPNIMKLYDFFEDKR--NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGV 149
Query: 240 MYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
YLH HN+VH D+KP+NLL+ +KI DF +S VFE+ + R GT + APE
Sbjct: 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-LGTAYYIAPE 208
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
L Y K D W++GV L+ ++ G PF G+T Q+ K+ F +PE +N
Sbjct: 209 -VLRKKYDEK-CDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD---SPEWKN 263
Query: 357 LLEG-------LLCKDPTRRLTLNDVAKHTWV 381
+ EG +L D RR++ +H W+
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 143/272 (52%), Gaps = 18/272 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+K+G+G+YG+V+L + L G AIK KS ++ + A+ D EV +
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVT---TTSNSGALLD---EVAV 57
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D ++Y+V+E G D E A ++ ++S
Sbjct: 58 LKQLDHPNIMKLYEFFEDKR--NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 238 GLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G YLH HN+VH D+KP+NLL+ + +KI DF +S FE + R GT + A
Sbjct: 116 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-LGTAYYIA 174
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF--PD--AM 350
PE L Y K D W+ GV LY ++ G PF G+T Q+ ++ F PD +
Sbjct: 175 PE-VLRKKYDEK-CDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
+ E + L++ +L +P++R++ + H W++
Sbjct: 233 SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 264
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 8 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 67
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 68 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 119
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 120 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 180 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 235
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 236 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 289
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNP 352
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 192 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 246
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 138/272 (50%), Gaps = 17/272 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G H+A+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
IV YLH ++++ D+KP+NLL+ G +++ DF ++ + L GTP +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYL 205
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPE 353
APE L Y KA D WA+GV +Y M G PF + Y+KIV+ + FP + +
Sbjct: 206 APEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
Query: 354 LRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
L++LL LL D T+R +ND+ H W
Sbjct: 265 LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 144/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EY G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +K+ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 143/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE + Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIIISKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 138/272 (50%), Gaps = 17/272 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G H+A+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
IV YLH ++++ D+KP+NLL+ G +++ DF ++ + L GTP +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYL 205
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPE 353
APE L Y KA D WA+GV +Y M G PF + Y+KIV+ + FP + +
Sbjct: 206 APEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
Query: 354 LRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
L++LL LL D T+R +ND+ H W
Sbjct: 265 LKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNP 352
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 192 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 246
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 138/272 (50%), Gaps = 17/272 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G H+A+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
IV YLH ++++ D+KP+NLL+ G +++ DF ++ + L GTP +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYL 205
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPE 353
APE L Y KA D WA+GV +Y M G PF + Y+KIV+ + FP + +
Sbjct: 206 APEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
Query: 354 LRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
L++LL LL D T+R +ND+ H W
Sbjct: 265 LKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 76 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 128 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 139/269 (51%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R GK YA K K LS R S ++ REV I++ ++HP
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE---EIEREVNILREIRHP 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
NI+ L ++ + N ++LE V G D + ++ E A ++L+ I+ G+ YLH
Sbjct: 76 NIITLHDIFE--NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P+ +K+ DF ++ E N+ + GTP F APE
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNY 192
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD---AMNPE 353
LGL AD W++GV Y ++ G PFLGET Q+T I + F + + E
Sbjct: 193 EPLGL-----EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 247
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL KDP RR+ + +H+W+
Sbjct: 248 LAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EY G
Sbjct: 75 DKQKVVKLK--EIEHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +K+ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
+++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 LAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEALAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 142/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + AP L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPAIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 190
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 191 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNP 352
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 192 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 246
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 142/272 (52%), Gaps = 18/272 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+K+G+G+YG+V+L + L G AIK KS ++ + A+ D EV +
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVT---TTSNSGALLD---EVAV 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D ++Y+V+E G D E A ++ ++S
Sbjct: 75 LKQLDHPNIMKLYEFFEDKR--NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 132
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G YLH HN+VH D+KP+NLL+ +KI DF +S FE + R GT + A
Sbjct: 133 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIA 191
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF--PD--AM 350
PE L Y K D W+ GV LY ++ G PF G+T Q+ ++ F PD +
Sbjct: 192 PE-VLRKKYDEK-CDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
+ E + L++ +L +P++R++ + H W++
Sbjct: 250 SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 17/272 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EY G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
IV YLH ++++ D+KP+NL++ G +K+ DF ++ + L GTP +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYL 205
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPE 353
APE L Y KA D WA+GV +Y M G PF + Y+KIV+ + FP + +
Sbjct: 206 APEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
Query: 354 LRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
L++LL LL D T+R +ND+ H W
Sbjct: 265 LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 142/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EYV G
Sbjct: 75 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NLL+ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+ +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKW 296
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 190
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 191 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 190
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 191 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 190
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 191 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 190
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 191 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 73 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 189
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 190 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNP 352
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 192 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 246
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 73 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 189
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 190 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 144/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EY G
Sbjct: 75 DKQKVVKLKQI--EHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +K+ DF
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 19/268 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +VVL GK +A+K K L + + + E+ +++ ++H N
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--------KGKESSIENEIAVLRKIKHEN 81
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
IV L ++ + PN H Y+V++ V G D + G E A +R ++ + YLH
Sbjct: 82 IVALEDIYESPN--HLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 246 NVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
+VH D+KP+NLL + I DF +S++ E DV+ + GTP + APE
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y KA D W++GV Y ++ G PF E +++I+ F D ++ ++ +
Sbjct: 199 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFI 257
Query: 359 EGLLCKDPTRRLTLNDVAKHTWVLGDNG 386
L+ KDP +R T A+H W+ GD
Sbjct: 258 RNLMEKDPNKRYTCEQAARHPWIAGDTA 285
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ E + + R I++ + P +V L D + + YMV+EY G
Sbjct: 75 DKQKVVKLK--EIEHTLNEKR----ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
+++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 LAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 PNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 190
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 191 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EY G
Sbjct: 75 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGG 126
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +++ DF
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 187 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 138/269 (51%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R GK YA K K L R S ++ REV I++ ++HP
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSRE---EIEREVNILREIRHP 89
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
NI+ L ++ + N ++LE V G D + ++ E A ++L+ I+ G+ YLH
Sbjct: 90 NIITLHDIFE--NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P+ +K+ DF ++ E N+ + GTP F APE
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNY 206
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD---AMNPE 353
LGL AD W++GV Y ++ G PFLGET Q+T I + F + + E
Sbjct: 207 EPLGL-----EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 261
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL KDP RR+ + +H+W+
Sbjct: 262 LAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P + L D + + YMV+EY G
Sbjct: 76 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +K+ DF
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 17/272 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P + L D + + YMV+EY G + G E AR Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
IV YLH ++++ D+KP+NL++ G +K+ DF ++ + L GTP +
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYL 206
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPE 353
APE L Y KA D WA+GV +Y M G PF + Y+KIV+ + FP + +
Sbjct: 207 APEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
Query: 354 LRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
L++LL LL D T+R +ND+ H W
Sbjct: 266 LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 131/255 (51%), Gaps = 10/255 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K + VA E A T VL
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI----VAKDEVAHTLTENRVL 205
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 206 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 237 SGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
S L YLH NVV+ D+K +NL++ G +KI DF + + D ++ GTP + AP
Sbjct: 262 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 321
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELR 355
E YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP + PE +
Sbjct: 322 EVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 380
Query: 356 NLLEGLLCKDPTRRL 370
+LL GLL KDP +RL
Sbjct: 381 SLLSGLLKKDPKQRL 395
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 131/255 (51%), Gaps = 10/255 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K + VA E A T VL
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI----VAKDEVAHTLTENRVL 202
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 203 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 237 SGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
S L YLH NVV+ D+K +NL++ G +KI DF + + D ++ GTP + AP
Sbjct: 259 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 318
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELR 355
E YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP + PE +
Sbjct: 319 EVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 377
Query: 356 NLLEGLLCKDPTRRL 370
+LL GLL KDP +RL
Sbjct: 378 SLLSGLLKKDPKQRL 392
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 94 CRQFPVKESNKLIRSEDE--NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P + L D + + YMV+EY G
Sbjct: 76 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGG 127
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFS 271
+ G E AR Y IV YLH ++++ D+KP+NL++ G +K+ DF
Sbjct: 128 EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 272 VSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
++ + L GTP + APE L Y KA D WA+GV +Y M G PF +
Sbjct: 188 FAKRVKGRTWXL---CGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 332 LQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
Y+KIV+ + FP + +L++LL LL D T+R +ND+ H W
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 138/269 (51%), Gaps = 17/269 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R +G GS+G+V L RS +G++YA+K K + +L+ + E L
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK------QVEHTNDERL 58
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ ++ HP I+ + D + +M+++Y+EG + +A+ Y ++
Sbjct: 59 MLSIVTHPFIIRMWGTFQD--AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
L YLH ++++ D+KP+N+L+ +G +KI DF ++ D V GTP + APE
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPE 173
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
Y K+ D W+ G+ +Y M+ G PF TY+KI+N L FP N ++++
Sbjct: 174 VVSTKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKD 232
Query: 357 LLEGLLCKDPTRRL-----TLNDVAKHTW 380
LL L+ +D ++RL DV H W
Sbjct: 233 LLSRLITRDLSQRLGNLQNGTEDVKNHPW 261
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 131/255 (51%), Gaps = 10/255 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K + VA E A T VL
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI----VAKDEVAHTLTENRVL 63
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 64 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 119
Query: 237 SGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
S L YLH NVV+ D+K +NL++ G +KI DF + + D ++ GTP + AP
Sbjct: 120 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 179
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELR 355
E YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP + PE +
Sbjct: 180 EVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 238
Query: 356 NLLEGLLCKDPTRRL 370
+LL GLL KDP +RL
Sbjct: 239 SLLSGLLKKDPKQRL 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 10/255 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K ++ VA E A T VL
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK----EVIVAKDEVAHTLTENRVL 62
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 63 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 237 SGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
S L YLH NVV+ D+K +NL++ G +KI DF + + D ++ GTP + AP
Sbjct: 119 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 178
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELR 355
E YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP + PE +
Sbjct: 179 EVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 237
Query: 356 NLLEGLLCKDPTRRL 370
+LL GLL KDP +RL
Sbjct: 238 SLLSGLLKKDPKQRL 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 131/255 (51%), Gaps = 10/255 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K + VA E A T VL
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI----VAKDEVAHTLTENRVL 64
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 65 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 237 SGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
S L YLH NVV+ D+K +NL++ G +KI DF + + D ++ GTP + AP
Sbjct: 121 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 180
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELR 355
E YG +A D W +GV +Y M+ G+ PF + + ++ I+ + FP + PE +
Sbjct: 181 EVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 239
Query: 356 NLLEGLLCKDPTRRL 370
+LL GLL KDP +RL
Sbjct: 240 SLLSGLLKKDPKQRL 254
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 143/273 (52%), Gaps = 23/273 (8%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +YV ++KIG GS+GK +L +S+ DG+ Y IK + S +S + RREV
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-------SKEREESRREVA 75
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF----GQPGAI-GESMARKY 231
++ ++HPNIV E ++ S Y+V++Y EG D F Q G + E +
Sbjct: 76 VLANMKHPNIVQYRESFEENGS--LYIVMDYCEG---GDLFKRINAQKGVLFQEDQILDW 130
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
I L ++H ++H DIK N+ + GTV++GDF +++V ++ R GTP
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA-- 349
+ +PE C Y K +D WA+G LY + ++ F ++++ KI++ S FP
Sbjct: 191 YLSPEICENKPYNNK-SDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS--FPPVSL 247
Query: 350 -MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ +LR+L+ L ++P R ++N + + ++
Sbjct: 248 HYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 134/270 (49%), Gaps = 23/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++G+G + V R G YA K K R S D+ REV I+K +QH
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PN++ L EV + N ++ E V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 PNVITLHEVYE--NKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 244 GHNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC- 298
+ H D+KP+N+++ P +KI DF ++ + N+ + GTP F APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVN 190
Query: 299 ---LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MN 351
LGL AD W++GV Y ++ G PFLG+T Q+T + + F D +
Sbjct: 191 YEPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + LL KDP +R+T+ D +H W+
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 93
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDF--SVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF SV +D+ GT + PE G
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGR 207
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 208 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 266
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 267 LKHNPSQRPMLREVLEHPWITANSS 291
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 25/272 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++ RK+G+G++G V L G IK +K S+ M + E+ ++K
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--------SQVPMEQIEAEIEVLK 75
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY----LRDI 235
L HPNI+ + EV +D ++ Y+V+E EG + A G++++ Y ++ +
Sbjct: 76 SLDHPNIIKIFEVFEDYHN--MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 236 VSGLMYLHGHNVVHGDIKPDNLL---VAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ L Y H +VVH D+KP+N+L +P +KI DF ++++F+ D + GT ++
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALY 192
Query: 293 TAPECC-LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN---NSLVFPD 348
APE +T+ D W+ GV +Y+++ G PF G +L++ K N V
Sbjct: 193 MAPEVFKRDVTF---KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECR 249
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
+ P+ +LL+ +L KDP RR + V H W
Sbjct: 250 PLTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D S Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T QDTY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 186
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 187 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 246 LKHNPSQRPMLREVLEHPWITANSS 270
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDF--SVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF SV D+ GT + PE G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 182
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 183 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 241
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 242 LKHNPSQRPMLREVLEHPWITANSS 266
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 123/264 (46%), Gaps = 13/264 (4%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
V+H DIKP+NLL+ +G +KI DF S D L GT + PE G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL---CGTLDYLPPEMIEGRM 183
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLL 362
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ LL
Sbjct: 184 HDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
Query: 363 CKDPTRRLTLNDVAKHTWVLGDNG 386
+P++R L +V +H W+ ++
Sbjct: 243 KHNPSQRPMLREVLEHPWITANSS 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 84
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 85 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 198
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 199 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 257
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 258 LKHNPSQRPMLREVLEHPWITANSS 282
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 93
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 207
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 208 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 266
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 267 LKHNPSQRPMLREVLEHPWITANSS 291
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDF--SVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF SV D+ GT + PE G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDF--SVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF SV D+ GT + PE G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 186
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 187 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 246 LKHNPSQRPMLREVLEHPWITANSS 270
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTY 303
V+H DIKP+NLL+ +G +KI DF S + GT + PE G +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ LL
Sbjct: 189 DEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 364 KDPTRRLTLNDVAKHTWVLGDNG 386
+P++R L +V +H W+ ++
Sbjct: 248 HNPSQRPMLREVLEHPWITANSS 270
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 19/271 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+G+V+ + + + YA+K +K+ + + + REV ++K L HPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-------SAKNKDTSTILREVELLKKLDHPN 82
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I+ L E+++D +S FY+V E G D + E A + ++ + SG+ Y+H H
Sbjct: 83 IMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 246 NVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
N+VH D+KP+N+L+ +KI DF +S F+ N ++ GT + APE G T
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y K D W+ GV LY ++ G PF G+ D ++ F ++ + ++L+
Sbjct: 199 YDEK-CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 359 EGLLCKDPTRRLTLNDVAKHTWVLGDNGPIP 389
+L P+ R+T +H W+ + P
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKYSSETP 288
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDF--SVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF SV D+ GT + PE G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSS 268
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEXIEGR 186
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 187 XHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 246 LKHNPSQRPXLREVLEHPWITANSS 270
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 186
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 187 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 246 LKHNPSQRPMLREVLEHPWITANSS 270
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDF--SVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF SV +D+ GT + PE G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGR 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGR 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSS 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRS--PGTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLDYLPPEMIEGR 182
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 183 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 241
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 242 LKHNPSQRPMLREVLEHPWITANSS 266
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 134/263 (50%), Gaps = 19/263 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+G+V+ + + + YA+K +K+ + + + REV ++K L HPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-------SAKNKDTSTILREVELLKKLDHPN 82
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I+ L E+++D +S FY+V E G D + E A + ++ + SG+ Y+H H
Sbjct: 83 IMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 246 NVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
N+VH D+KP+N+L+ +KI DF +S F+ N ++ GT + APE G T
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y K D W+ GV LY ++ G PF G+ D ++ F ++ + ++L+
Sbjct: 199 YDEK-CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 359 EGLLCKDPTRRLTLNDVAKHTWV 381
+L P+ R+T +H W+
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWI 280
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 134/263 (50%), Gaps = 19/263 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+G+V+ + + + YA+K +K+ + + + REV ++K L HPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-------SAKNKDTSTILREVELLKKLDHPN 82
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I+ L E+++D +S FY+V E G D + E A + ++ + SG+ Y+H H
Sbjct: 83 IMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 246 NVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
N+VH D+KP+N+L+ +KI DF +S F+ N ++ GT + APE G T
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y K D W+ GV LY ++ G PF G+ D ++ F ++ + ++L+
Sbjct: 199 YDEK-CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 359 EGLLCKDPTRRLTLNDVAKHTWV 381
+L P+ R+T +H W+
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWI 280
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR GT + PE G
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGR 183
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 184 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 242
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 243 LKHNPSQRPMLREVLEHPWITANSS 267
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 66
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 67 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 180
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 181 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 239
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 240 LKHNPSQRPMLREVLEHPWITANSS 264
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 71
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 185
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 186 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 244
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 245 LKHNPSQRPMLREVLEHPWITANSS 269
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI +F S RR+ GT + PE G
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 183
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 184 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 242
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 243 LKHNPSQRPMLREVLEHPWITANSS 267
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 123/264 (46%), Gaps = 13/264 (4%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE------HQLRREVEIQSHLRH 71
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
V+H DIKP+NLL+ +G +KI DF S D L GT + PE G
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL---CGTLDYLPPEMIEGRM 186
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLL 362
+ K D W++GV Y ++G PF T Q+TY +I FPD + R+L+ LL
Sbjct: 187 HDEKV-DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLL 245
Query: 363 CKDPTRRLTLNDVAKHTWVLGDNG 386
+ ++RLTL +V +H W+ ++
Sbjct: 246 KHNASQRLTLAEVLEHPWIKANSS 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTY 303
V+H DIKP+NLL+ +G +KI DF S + GT + PE G +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ LL
Sbjct: 187 DEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 364 KDPTRRLTLNDVAKHTWVLGDNG 386
+P++R L +V +H W+ ++
Sbjct: 246 HNPSQRPMLREVLEHPWITANSS 268
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 8/254 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+ + +R +G GS+GKV+L R G YA+K K + L+ E MT+ R +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--LQDDDVECTMTEKR---I 76
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ HP + L P D + V+E+V G + E+ AR Y +I+
Sbjct: 77 LSLARNHPFLTQLFCCFQTP--DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEII 134
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S LM+LH +++ D+K DN+L+ G K+ DF + + + GTP + APE
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE 194
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
+ YG A D WA+GV LY M+ G PF E D ++ I+N+ +V+P ++ +
Sbjct: 195 ILQEMLYG-PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATG 253
Query: 357 LLEGLLCKDPTRRL 370
+L+ + K+PT RL
Sbjct: 254 ILKSFMTKNPTMRL 267
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 64
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 65 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 178
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 179 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 237
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 238 LKHNPSQRPMLREVLEHPWITANSS 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR GT + PE G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGR 181
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 142/280 (50%), Gaps = 21/280 (7%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T + ++ + +G+G++ +V L + L GK +A+K KS + + +
Sbjct: 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---------DSSLEN 55
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ ++K ++H NIV L ++ + ++ H+Y+V++ V G D + G E A ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYE--STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ 113
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLL-VAP--SGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
++S + YLH + +VH D+KP+NLL + P + + I DF +S++ + N ++ + GTP
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTP 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP--- 347
+ APE Y KA D W++GV Y ++ G PF ET ++KI F
Sbjct: 172 GYVAPEVLAQKPY-SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF 230
Query: 348 -DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNG 386
D ++ ++ + LL KDP R T H W+ G+
Sbjct: 231 WDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTA 270
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 134/269 (49%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + ++ REV I++ + HP
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVCREEIEREVSILRQVLHP 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
NI+ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NIITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +K+ DF ++ ED + + GTP F APE
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD---AMNPE 353
LGL AD W++GV Y ++ G PFLG+T Q+T I S F + + E
Sbjct: 193 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL K+ +RLT+ + +H W+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI +F S RR+ GT + PE G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G+ PF T Q+TY +I FPD + R+L+ L
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L +P++R L +V +H W+ ++
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE------HQLRREVEIQSHLRH 71
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ +G +KI DF S RR+ GT + PE G
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGR 185
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W++GV Y ++G PF T Q+TY +I FPD + R+L+ L
Sbjct: 186 MHDEKV-DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRL 244
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDNG 386
L + ++RLTL +V +H W+ ++
Sbjct: 245 LKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G + KV L L G+ AIK K+ L + + ++ E+ +K L+H +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--------SDLPRIKTEIEALKNLRHQH 69
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I L V++ N +MVLEY G D + E R R IVS + Y+H
Sbjct: 70 ICQLYHVLETANK--IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV-LRRSPGTPVFTAPECCLGLTYG 304
H D+KP+NLL +K+ DF + + + D L+ G+ + APE G +Y
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 305 GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCK 364
G AD W++G+ LY ++ G PF + + Y KI+ P ++P LL+ +L
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQV 247
Query: 365 DPTRRLTLNDVAKHTWVLGD-NGPI 388
DP +R+++ ++ H W++ D N P+
Sbjct: 248 DPKKRISMKNLLNHPWIMQDYNYPV 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 18/271 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 80 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 238 GLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G+ Y+H + +VH D+KP+NLL+ + ++I DF +S FE ++ GT + A
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIA 196
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAM 350
PE G TY K D W+ GV LY ++ G PF G D K+ F +
Sbjct: 197 PEVLHG-TYDEK-CDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ ++L+ +L P+ R++ D H W+
Sbjct: 255 SESAKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 18/271 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 103
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 104 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 238 GLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G+ Y+H + +VH D+KP+NLL+ + ++I DF +S FE ++ GT + A
Sbjct: 162 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIA 220
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAM 350
PE G TY K D W+ GV LY ++ G PF G D K+ F +
Sbjct: 221 PEVLHG-TYDEK-CDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 278
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ ++L+ +L P+ R++ D H W+
Sbjct: 279 SESAKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 18/271 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 102
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 103 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 238 GLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G+ Y+H + +VH D+KP+NLL+ + ++I DF +S FE ++ GT + A
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIA 219
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAM 350
PE G TY K D W+ GV LY ++ G PF G D K+ F +
Sbjct: 220 PEVLHG-TYDEK-CDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 277
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ ++L+ +L P+ R++ D H W+
Sbjct: 278 SESAKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 18/271 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 85
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 86 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 143
Query: 238 GLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G+ Y+H + +VH D+KP+NLL+ + ++I DF +S FE ++ GT + A
Sbjct: 144 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIA 202
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAM 350
PE G TY K D W+ GV LY ++ G PF G D K+ F +
Sbjct: 203 PEVLHG-TYDEK-CDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 260
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ ++L+ +L P+ R++ D H W+
Sbjct: 261 SESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+++ VR +G G +G V L R + A+K KS L K E +RRE+
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK------EGVEHQLRREIE 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
I L+HPNI+ + D Y++LE+ + G E + ++ ++
Sbjct: 67 IQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA 124
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTA 294
L Y H V+H DIKP+NLL+ G +KI DF S LRR GT +
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLP 180
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPEL 354
PE G T+ K D W GV Y ++G PF + +T+ +IVN L FP ++
Sbjct: 181 PEMIEGKTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS 239
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDN 385
++L+ LL P +RL L V +H WV ++
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 124/257 (48%), Gaps = 8/257 (3%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ ++ IG GS+GKV+L R + YA+K K + K + E R VL
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK----EEKHIMSERNVL- 92
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K ++HP +V L +D Y VL+Y+ G + E AR Y +I S
Sbjct: 93 LKNVKHPFLVGLHFSFQ--TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIAS 150
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPEC 297
L YLH N+V+ D+KP+N+L+ G + + DF + + + N GTP + APE
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV 210
Query: 298 CLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
Y + D W +G LY M+ G PF + YD I+N L + R+L
Sbjct: 211 LHKQPY-DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHL 269
Query: 358 LEGLLCKDPTRRLTLND 374
LEGLL KD T+RL D
Sbjct: 270 LEGLLQKDRTKRLGAKD 286
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 210
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 271 LDATKRL 277
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 70
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 71 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 187
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 247
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 248 LDATKRL 254
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 69
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 70 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 186
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 246
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 247 LDATKRL 253
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 68
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 69 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 185
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 245
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 246 LDATKRL 252
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 71
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 72 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 188
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 248
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 249 LDATKRL 255
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 90
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 91 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 207
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 267
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 268 LDATKRL 274
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 131/254 (51%), Gaps = 23/254 (9%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +Y ++ +G GSYG V+ R+ G+ AIK F +S K+ + AM RE+
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM---VKKIAM----REIK 76
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H N+VNL+EV +Y+V E+V+ +D P + + +KYL I+
Sbjct: 77 LLKQLRHENLVNLLEVC--KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQII 134
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
+G+ + H HN++H DIKP+N+LV+ SG VK+ DF ++ +V T + APE
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE 194
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET--------------LQDTYDKIVNN 342
+G GKA D WA+G + M +G+ F G++ L + ++ N
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254
Query: 343 SLVFPDAMNPELRN 356
+ VF PE++
Sbjct: 255 NPVFAGVRLPEIKE 268
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 96
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 97 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 213
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP A P+ R+L+E LL
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLV 273
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 274 LDATKRL 280
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE-LLTEKS 208
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 269 LDATKRL 275
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 90
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 91 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 207
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 267
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 268 LDATKRL 274
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 94
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 95 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 211
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 271
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 272 LDATKRL 278
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 271 LDATKRL 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +K+ DF ++ ED + + GTP F APE
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAM---NPE 353
LGL AD W++GV Y ++ G PFLG+T Q+T I + S F + E
Sbjct: 193 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL K+ +RLT+ + +H W+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 269 LDATKRL 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 75
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 76 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 192
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 252
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 253 LDATKRL 259
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 269 LDATKRL 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +K+ DF ++ ED + + GTP F APE
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAM---NPE 353
LGL AD W++GV Y ++ G PFLG+T Q+T I + S F + E
Sbjct: 193 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL K+ +RLT+ + +H W+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 271 LDATKRL 277
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 271 LDATKRL 277
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R + A+K KS L K E +RRE+ I L+H
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK------EGVEHQLRREIEIQSHLRH 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ + D Y++LE+ + G E + ++ ++ L Y H
Sbjct: 74 PNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ G +KI DF S LRR GT + PE G
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
T+ K D W GV Y ++G PF + +T+ +IVN L FP ++ ++L+ L
Sbjct: 188 THDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKL 246
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDN 385
L P +RL L V +H WV ++
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +K+ DF ++ ED + + GTP F APE
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD---AMNPE 353
LGL AD W++GV Y ++ G PFLG+T Q+T I S F + + E
Sbjct: 193 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL K+ +RLT+ + +H W+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 94
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 95 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 211
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 271
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 272 LDATKRL 278
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +K+ DF ++ ED + + GTP F APE
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD---AMNPE 353
LGL AD W++GV Y ++ G PFLG+T Q+T I S F + + E
Sbjct: 193 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL K+ +RLT+ + +H W+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R + A+K KS L K E +RRE+ I L+H
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK------EGVEHQLRREIEIQSHLRH 74
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ + D Y++LE+ + G E + ++ ++ L Y H
Sbjct: 75 PNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
V+H DIKP+NLL+ G +KI DF S LRR GT + PE G
Sbjct: 133 ERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
T+ K D W GV Y ++G PF + +T+ +IVN L FP ++ ++L+ L
Sbjct: 189 THDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKL 247
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDN 385
L P +RL L V +H WV ++
Sbjct: 248 LRYHPPQRLPLKGVMEHPWVKANS 271
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 98
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 99 FVKLYFCFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 215
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 275
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 276 LDATKRL 282
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 23/269 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 245 HNVVHGDIKPDNLLV----APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC-- 298
+ H D+KP+N+++ P +K+ DF ++ ED + + GTP F APE
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 299 --LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAM---NPE 353
LGL AD W++GV Y ++ G PFLG+T Q+T I + S F + E
Sbjct: 193 EPLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 354 L-RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ + LL K+ +RLT+ + +H W+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 271 LDATKRL 277
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 17/275 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T+ EY ++G G++ V L G+ YA + LS + R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-------RDHQKLER 59
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I ++L+HPNIV L + I + H Y++ + V G + E+ A ++
Sbjct: 60 EARICRLLKHPNIVRLHDSISE--EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ 117
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
I+ +++ H VVH ++KP+NLL+A VK+ DF ++ E + GTP
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP--- 347
+ +PE YG K D WA GV LY +++G PF E Y +I + FP
Sbjct: 178 GYLSPEVLRKDPYG-KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 236
Query: 348 -DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
D + PE ++L+ +L +P++R+T + KH W+
Sbjct: 237 WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 271 LDATKRL 277
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 17/273 (6%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
M +EY IG G++ V G YA K + LS + RE
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSA-------RDHQKLEREA 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
I ++L+H NIV L + I + Y+V + V G + E+ A ++ I
Sbjct: 55 RICRLLKHSNIVRLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+ +++ H VVH D+KP+NLL+A VK+ DF ++ + D GTP +
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----D 348
+PE YG K D WA GV LY +++G PF E Y +I + FP D
Sbjct: 173 LSPEVLRKEAYG-KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD 231
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ PE +NL+ +L +P +R+T ++ KH WV
Sbjct: 232 TVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 18/271 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI L E +D +FY+V E G D E A + +R ++S
Sbjct: 80 LKQLDHPNIXKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 238 GLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G+ Y H + +VH D+KP+NLL+ + ++I DF +S FE + GT + A
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX-KDKIGTAYYIA 196
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAM 350
PE G TY K D W+ GV LY ++ G PF G D K+ F +
Sbjct: 197 PEVLHG-TYDEK-CDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ ++L+ L P+ R++ D H W+
Sbjct: 255 SESAKDLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 17/275 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T+ ++Y ++G G++ V + YA K + LS + R
Sbjct: 27 TRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-------RDHQKLER 79
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I ++L+HPNIV L + I + Y+V + V G + E+ A +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIH 137
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
I+ + ++H H++VH D+KP+NLL+A VK+ DF ++ + + GTP
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP--- 347
+ +PE YG K D WA GV LY +++G PF E Y +I + FP
Sbjct: 198 GYLSPEVLRKDPYG-KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPE 256
Query: 348 -DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
D + PE +NL+ +L +P +R+T + KH WV
Sbjct: 257 WDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTY 303
++H D+KP+N+L+ ++I DF ++V ++ R + GT + +PE L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 304 GGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
K++D WA+G +Y ++ G PF + KI+ FP+ P+ R+L+E LL
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 364 KDPTRRL 370
D T+RL
Sbjct: 269 LDATKRL 275
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 17/269 (6%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++G G++ V L G+ YA K + LS + RE I +
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA-------RDHQKLEREARICR 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
+L+HPNIV L + I + H Y++ + V G + E+ A ++ I+ +
Sbjct: 77 LLKHPNIVRLHDSISEEG--HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 134
Query: 240 MYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
++ H VVH D+KP+NLL+A VK+ DF ++ E + GTP + +PE
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNP 352
YG K D WA GV LY +++G PF E Y +I + FP D + P
Sbjct: 195 VLRKDPYG-KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 253
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
E ++L+ +L +P++R+T + KH W+
Sbjct: 254 EAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 19/268 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 246 NVVHGDIKPDNLL---VAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
+VH D+KP+NLL + + I DF +S++ ED VL + GTP + APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y KA D W++GV Y ++ G PF E +++I+ F D ++ ++ +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 359 EGLLCKDPTRRLTLNDVAKHTWVLGDNG 386
L+ KDP +R T +H W+ GD
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTA 281
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 19/268 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 246 NVVHGDIKPDNLL---VAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
+VH D+KP+NLL + + I DF +S++ ED VL + GTP + APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y KA D W++GV Y ++ G PF E +++I+ F D ++ ++ +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 359 EGLLCKDPTRRLTLNDVAKHTWVLGDNG 386
L+ KDP +R T +H W+ GD
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTA 281
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 19/268 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 246 NVVHGDIKPDNLL---VAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
+VH D+KP+NLL + + I DF +S++ ED VL + GTP + APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y KA D W++GV Y ++ G PF E +++I+ F D ++ ++ +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 359 EGLLCKDPTRRLTLNDVAKHTWVLGDNG 386
L+ KDP +R T +H W+ GD
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTA 281
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 19/268 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 246 NVVHGDIKPDNLL---VAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
+VH D+KP+NLL + + I DF +S++ ED VL + GTP + APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLL 358
Y KA D W++GV Y ++ G PF E +++I+ F D ++ ++ +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 359 EGLLCKDPTRRLTLNDVAKHTWVLGDNG 386
L+ KDP +R T +H W+ GD
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTA 281
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 135 VLYRSSLDG--KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEV 192
++YR G K YA+K K+ K+ VR E+ ++ L HPNI+ L E+
Sbjct: 68 IVYRCKQKGTQKPYALKVLKKTVDKKI-----------VRTEIGVLLRLSHPNIIKLKEI 116
Query: 193 IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDI 252
+ P +VLE V G D + G E A ++ I+ + YLH + +VH D+
Sbjct: 117 FETPT--EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 253 KPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSP-GTPVFTAPECCLGLTYGGKAA 308
KP+NLL AP +KI DF +S++ E + VL ++ GTP + APE G YG +
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCAPEILRGCAYGPE-V 231
Query: 309 DTWAVGVTLYYMIIGQYPFLGETL-QDTYDKIVNNSLVFP----DAMNPELRNLLEGLLC 363
D W+VG+ Y ++ G PF E Q + +I+N F D ++ ++L+ L+
Sbjct: 232 DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIV 291
Query: 364 KDPTRRLTLNDVAKHTWVLG 383
DP +RLT +H WV G
Sbjct: 292 LDPKKRLTTFQALQHPWVTG 311
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 35/275 (12%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G++ V + G+ +A+K ++K +P + D++RE I ML+HP+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVD---VAKFTSSPG-LSTEDLKREASICHMLKHPH 87
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRDIVS 237
IV L+E + YMV E+++G K + GF E++A Y+R I+
Sbjct: 88 IVELLETYS--SDGMLYMVFEFMDGADLCFEIVKRADAGF----VYSEAVASHYMRQILE 141
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAP---SGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
L Y H +N++H D+KP+N+L+A S VK+GDF V+ + V GTP F A
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNP-- 352
PE Y GK D W GV L+ ++ G PF G T + ++ I+ MNP
Sbjct: 202 PEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKY----KMNPRQ 255
Query: 353 ------ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++L+ +L DP R+T+ + H W+
Sbjct: 256 WSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 19/276 (6%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + + S++A R+ IM
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM----IKRSDSAFFWEERD--IM 123
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E AR Y ++V
Sbjct: 124 AFANSPWVVQLFYAFQDDR--YLYMVMEYMPGG-DLVNLMSNYDVPEKWARFYTAEVVLA 180
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV-LRRSPGTPVFTAPEC 297
L +H +H D+KPDN+L+ SG +K+ DF + V + GTP + +PE
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 298 CL---GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--NSLVFPD--AM 350
G Y G+ D W+VGV LY M++G PF ++L TY KI+N NSL FPD +
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 300
Query: 351 NPELRNLLEGLLCKDPTR--RLTLNDVAKHTWVLGD 384
+ E +NL+ L R R + ++ +H + D
Sbjct: 301 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 19/276 (6%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + + S++A R+ IM
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM----IKRSDSAFFWEERD--IM 128
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E AR Y ++V
Sbjct: 129 AFANSPWVVQLFYAFQDDR--YLYMVMEYMPGG-DLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV-LRRSPGTPVFTAPEC 297
L +H +H D+KPDN+L+ SG +K+ DF + V + GTP + +PE
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 298 CL---GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--NSLVFPD--AM 350
G Y G+ D W+VGV LY M++G PF ++L TY KI+N NSL FPD +
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 351 NPELRNLLEGLLCKDPTR--RLTLNDVAKHTWVLGD 384
+ E +NL+ L R R + ++ +H + D
Sbjct: 306 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 341
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
M +EY ++G G++ V G+ YA K + LS + RE
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-------RDHQKLEREA 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
I ++L+HPNIV L + I + Y+V + V G + E+ A ++ I
Sbjct: 55 RICRLLKHPNIVRLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+ + + H + +VH D+KP+NLL+A VK+ DF ++ + D GTP +
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----D 348
+PE YG K D WA GV LY +++G PF E Y +I + FP D
Sbjct: 173 LSPEVLRKDPYG-KPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 231
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ PE ++L+ +L +P +R+T ++ KH W+
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + K S++A R+ IM
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK----RSDSAFFWEERD--IM 128
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E AR Y ++V
Sbjct: 129 AFANSPWVVQLFYAFQDDR--YLYMVMEYMPGG-DLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV-LRRSPGTPVFTAPEC 297
L +H +H D+KPDN+L+ SG +K+ DF + V + GTP + +PE
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 298 CL---GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--NSLVFPD--AM 350
G Y G+ D W+VGV LY M++G PF ++L TY KI+N NSL FPD +
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 351 NPELRNLLEGLLCKDPTR--RLTLNDVAKHTWVLGDN 385
+ E +NL+ L R R + ++ +H + D
Sbjct: 306 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 342
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
M +EY ++G G++ V G+ YA K + LS + RE
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-------RDHQKLEREA 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
I ++L+HPNIV L + I + Y+V + V G + E+ A ++ I
Sbjct: 55 RICRLLKHPNIVRLHDSISE--EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+ + + H + +VH D+KP+NLL+A VK+ DF ++ + D GTP +
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----D 348
+PE YG K D WA GV LY +++G PF E Y +I + FP D
Sbjct: 173 LSPEVLRKDPYG-KPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 231
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ PE ++L+ +L +P +R+T ++ KH W+
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 24/310 (7%)
Query: 98 PVKESNKLIRSEDENGTK---MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKS 154
P +++ I D NG + + ++ + +G GS+GKV+L + YA+K K
Sbjct: 318 PEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD 377
Query: 155 HLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDN 214
+ + + T V + VL + + P + L D Y V+EYV G
Sbjct: 378 ----VVIQDDDVECTMVEKRVLALPG-KPPFLTQLHSCFQ--TMDRLYFVMEYVNGGDLM 430
Query: 215 DGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ 274
Q G E A Y +I GL +L +++ D+K DN+++ G +KI DF + +
Sbjct: 431 YHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
Query: 275 VFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQD 334
D + GTP + APE YG K+ D WA GV LY M+ GQ PF GE +
Sbjct: 491 ENIWDGVTTKXFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
Query: 335 TYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLN-----DVAKHTWVLGDNGPIP 389
+ I+ +++ +P +M+ E + +GL+ K P +RL D+ +H +
Sbjct: 550 LFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF-------- 601
Query: 390 QYLCWCKRDR 399
+Y+ W K +R
Sbjct: 602 RYIDWEKLER 611
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 135/257 (52%), Gaps = 10/257 (3%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ V S G AIK K + K + + V+ EV I L+HP+
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM------VQRVQNEVKIHCQLKHPS 72
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
I+ L +D S++ Y+VLE G+ + + E+ AR ++ I++G++YLH
Sbjct: 73 ILELYNYFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 245 HNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYG 304
H ++H D+ NLL+ + +KI DF ++ + ++ GTP + +PE +G
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHG 190
Query: 305 GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCK 364
++ D W++G Y ++IG+ PF +T+++T +K+V P ++ E ++L+ LL +
Sbjct: 191 LES-DVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRR 249
Query: 365 DPTRRLTLNDVAKHTWV 381
+P RL+L+ V H ++
Sbjct: 250 NPADRLSLSSVLDHPFM 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 131/272 (48%), Gaps = 22/272 (8%)
Query: 117 INEYVHVRK-IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IN+Y + IG GS+G+V + A K K + + ++E+
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---------DRFKQEI 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
IMK L HPNI+ L E +D N+D Y+V+E G + ES A + ++D+
Sbjct: 75 EIMKSLDHPNIIRLYETFED-NTD-IYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 132
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+S + Y H NV H D+KP+N L +P +K+ DF ++ F+ ++R GTP +
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPYY 191
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA--- 349
+P+ GL G D W+ GV +Y ++ G PF T + KI + FP+
Sbjct: 192 VSPQVLEGLY--GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWL 249
Query: 350 -MNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++P+ +L+ LL K P +R+T +H W
Sbjct: 250 NVSPQAESLIRRLLTKSPKQRITSLQALEHEW 281
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 131/272 (48%), Gaps = 22/272 (8%)
Query: 117 INEYVHVRK-IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IN+Y + IG GS+G+V + A K K + + ++E+
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---------DRFKQEI 57
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
IMK L HPNI+ L E +D N+D Y+V+E G + ES A + ++D+
Sbjct: 58 EIMKSLDHPNIIRLYETFED-NTD-IYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+S + Y H NV H D+KP+N L +P +K+ DF ++ F+ ++R GTP +
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPYY 174
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA--- 349
+P+ GL G D W+ GV +Y ++ G PF T + KI + FP+
Sbjct: 175 VSPQVLEGLY--GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWL 232
Query: 350 -MNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++P+ +L+ LL K P +R+T +H W
Sbjct: 233 NVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 8/245 (3%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+GKV+L + YAIK K + + + T V + VL + + + P
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKD----VVIQDDDVECTMVEKRVLAL-LDKPPF 81
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
+ L D Y V+EYV G Q G E A Y +I GL +LH
Sbjct: 82 LTQLHSCFQ--TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG 305
+++ D+K DN+++ G +KI DF + + D R GTP + APE YG
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYG- 198
Query: 306 KAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKD 365
K+ D WA GV LY M+ GQ PF GE + + I+ +++ +P +++ E ++ +GL+ K
Sbjct: 199 KSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKH 258
Query: 366 PTRRL 370
P +RL
Sbjct: 259 PAKRL 263
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K KS + K E +RRE+ I L H
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEK------EGVEHQLRREIEIQAHLHH 82
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D Y++LEY + E + ++ LMY H
Sbjct: 83 PNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGL 301
G V+H DIKP+NLL+ G +KI DF S LRR GT + PE G
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
+ K D W +GV Y +++G PF + +TY +IV L FP ++ ++L+ L
Sbjct: 197 MHNEKV-DLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKL 255
Query: 362 LCKDPTRRLTLNDVAKHTWVLGDN 385
L +P+ RL L V+ H WV ++
Sbjct: 256 LRHNPSERLPLAQVSAHPWVRANS 279
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 138/298 (46%), Gaps = 24/298 (8%)
Query: 110 DENGTK---MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSET 166
D NG + + ++ + +G GS+GKV+L + YA+K K + + +
Sbjct: 9 DNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD----VVIQDDDV 64
Query: 167 AMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGES 226
T V + VL + + P + L D Y V+EYV G Q G E
Sbjct: 65 ECTMVEKRVLALPG-KPPFLTQLHSCFQ--TMDRLYFVMEYVNGGDLMYHIQQVGRFKEP 121
Query: 227 MARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRS 286
A Y +I GL +L +++ D+K DN+++ G +KI DF + + D +
Sbjct: 122 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF 181
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF 346
GTP + APE YG K+ D WA GV LY M+ GQ PF GE + + I+ +++ +
Sbjct: 182 CGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 347 PDAMNPELRNLLEGLLCKDPTRRLTLN-----DVAKHTWVLGDNGPIPQYLCWCKRDR 399
P +M+ E + +GL+ K P +RL D+ +H + +Y+ W K +R
Sbjct: 241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF--------RYIDWEKLER 290
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 11/251 (4%)
Query: 123 VRKIGAGSYGKVVLYRS---SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+R +G G YGKV R + GK +A+K K+ + + +TA T R +L +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR---NAKDTAHTKAERNIL--E 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
++HP IV+LI Y++LEY+ G + G E A YL +I L
Sbjct: 77 EVKHPFIVDLIYAFQ--TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
+LH +++ D+KP+N+++ G VK+ DF + + D V GT + APE +
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLE 359
+ +A D W++G +Y M+ G PF GE + T DKI+ L P + E R+LL+
Sbjct: 195 RSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 360 GLLCKDPTRRL 370
LL ++ RL
Sbjct: 254 KLLKRNAASRL 264
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 11/251 (4%)
Query: 123 VRKIGAGSYGKVVLYRS---SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+R +G G YGKV R + GK +A+K K+ + + +TA T R +L +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR---NAKDTAHTKAERNIL--E 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
++HP IV+LI Y++LEY+ G + G E A YL +I L
Sbjct: 77 EVKHPFIVDLIYAFQ--TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
+LH +++ D+KP+N+++ G VK+ DF + + D V GT + APE +
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLE 359
+ +A D W++G +Y M+ G PF GE + T DKI+ L P + E R+LL+
Sbjct: 195 RSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 360 GLLCKDPTRRL 370
LL ++ RL
Sbjct: 254 KLLKRNAASRL 264
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 146/287 (50%), Gaps = 20/287 (6%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ ++G+G++G V++R KA + ++K P V+ E+ IM L
Sbjct: 56 LEELGSGAFG--VVHRC-------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 106
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFG-QPGAIGESMARKYLRDIVSGLMY 241
HP ++NL + +D ++LE++ G D + + E+ Y+R GL +
Sbjct: 107 HPKLINLHDAFEDKYE--MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 164
Query: 242 LHGHNVVHGDIKPDNLL--VAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
+H H++VH DIKP+N++ + +VKI DF ++ D ++++ + T F APE +
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEI-V 222
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD----AMNPELR 355
G D WA+GV Y ++ G PF GE +T + F + +++PE +
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 282
Query: 356 NLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLRR 402
+ ++ LL K+P +RLT++D +H W+ GD+ + + + +++R+
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQ 329
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 9/263 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I +++ + +G GS+GKV L + +AIKA K + + + T V + VL
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKD----VVLMDDDVECTMVEKRVL 71
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + ++ ++ + V+EY+ G S A Y +I+
Sbjct: 72 SLAW-EHPFLTHMFCTFQ--TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 128
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL +LH +V+ D+K DN+L+ G +KI DF + + + GTP + APE
Sbjct: 129 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPE 188
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
LG Y + D W+ GV LY M+IGQ PF G+ ++ + I ++ +P + E ++
Sbjct: 189 ILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
Query: 357 LLEGLLCKDPTRRLTLN-DVAKH 378
LL L ++P +RL + D+ +H
Sbjct: 248 LLVKLFVREPEKRLGVRGDIRQH 270
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 168/382 (43%), Gaps = 22/382 (5%)
Query: 10 RDMGCCSCFGFTRRKPKQALRPITGLNYRISRDFLLGXXXXXXXXXNSYNGEATNTADGD 69
RD C CF K R + ++RI R+ +S NG NT
Sbjct: 34 RDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVG 93
Query: 70 GGEMQNHAKRSEEIFRERELNGLICRQFPVKESNKLIRSEDENGTKMINEYVHVRKIGAG 129
G+ + SE + V + + ++ + +EY+ + +G+G
Sbjct: 94 KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKA-------LRDEYIMSKTLGSG 146
Query: 130 SYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNL 189
+ G+V L K AI+ K + ++ A+ +V E+ I+K L HP I+ +
Sbjct: 147 ACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKLNHPCIIKI 205
Query: 190 IEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVH 249
D ++ +Y+VLE +EG D + E+ + Y ++ + YLH + ++H
Sbjct: 206 KNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 262
Query: 250 GDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG- 305
D+KP+N+L++ +KI DF S++ + ++R GTP + APE + + G
Sbjct: 263 RDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVLVSVGTAGY 321
Query: 306 -KAADTWAVGVTLYYMIIGQYPFLGETLQDTY-DKIVNNSLVFPDAMNPELR----NLLE 359
+A D W++GV L+ + G PF Q + D+I + F + E+ +L++
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 381
Query: 360 GLLCKDPTRRLTLNDVAKHTWV 381
LL DP R T + +H W+
Sbjct: 382 KLLVVDPKARFTTEEALRHPWL 403
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 168/382 (43%), Gaps = 22/382 (5%)
Query: 10 RDMGCCSCFGFTRRKPKQALRPITGLNYRISRDFLLGXXXXXXXXXNSYNGEATNTADGD 69
RD C CF K R + ++RI R+ +S NG NT
Sbjct: 48 RDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVG 107
Query: 70 GGEMQNHAKRSEEIFRERELNGLICRQFPVKESNKLIRSEDENGTKMINEYVHVRKIGAG 129
G+ + SE + V + + ++ + +EY+ + +G+G
Sbjct: 108 KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKA-------LRDEYIMSKTLGSG 160
Query: 130 SYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNL 189
+ G+V L K AI+ K + ++ A+ +V E+ I+K L HP I+ +
Sbjct: 161 ACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKLNHPCIIKI 219
Query: 190 IEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVH 249
D ++ +Y+VLE +EG D + E+ + Y ++ + YLH + ++H
Sbjct: 220 KNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 276
Query: 250 GDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG- 305
D+KP+N+L++ +KI DF S++ + ++R GTP + APE + + G
Sbjct: 277 RDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVLVSVGTAGY 335
Query: 306 -KAADTWAVGVTLYYMIIGQYPFLGETLQDTY-DKIVNNSLVFPDAMNPELR----NLLE 359
+A D W++GV L+ + G PF Q + D+I + F + E+ +L++
Sbjct: 336 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 395
Query: 360 GLLCKDPTRRLTLNDVAKHTWV 381
LL DP R T + +H W+
Sbjct: 396 KLLVVDPKARFTTEEALRHPWL 417
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 69 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ YLH + ++H D+KP+N+L++ +KI DF S++ + ++R GTP + A
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLA 184
Query: 295 PECCLGLTYGG--KAADTWAVGVTLYYMIIGQYPFLGETLQDTY-DKIVNNSLVFPDAMN 351
PE + + G +A D W++GV L+ + G PF Q + D+I + F +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 352 PELR----NLLEGLLCKDPTRRLTLNDVAKHTWV 381
E+ +L++ LL DP R T + +H W+
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 69 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ YLH + ++H D+KP+N+L++ +KI DF S++ + ++R GTP + A
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLA 184
Query: 295 PECCLGLTYGG--KAADTWAVGVTLYYMIIGQYPFLGETLQDTY-DKIVNNSLVFPDAMN 351
PE + + G +A D W++GV L+ + G PF Q + D+I + F +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 352 PELR----NLLEGLLCKDPTRRLTLNDVAKHTWV 381
E+ +L++ LL DP R T + +H W+
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 67
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 68 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ YLH + ++H D+KP+N+L++ +KI DF S++ + ++R GTP + A
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLA 183
Query: 295 PECCLGLTYGG--KAADTWAVGVTLYYMIIGQYPFLGETLQDTY-DKIVNNSLVFPDAMN 351
PE + + G +A D W++GV L+ + G PF Q + D+I + F +
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 352 PELR----NLLEGLLCKDPTRRLTLNDVAKHTWV 381
E+ +L++ LL DP R T + +H W+
Sbjct: 244 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 69 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ YLH + ++H D+KP+N+L++ +KI DF S++ + ++R GTP + A
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLA 184
Query: 295 PECCLGLTYGG--KAADTWAVGVTLYYMIIGQYPFLGETLQDTY-DKIVNNSLVFPDAMN 351
PE + + G +A D W++GV L+ + G PF Q + D+I + F +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 352 PELR----NLLEGLLCKDPTRRLTLNDVAKHTWV 381
E+ +L++ LL DP R T + +H W+
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 75 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ YLH + ++H D+KP+N+L++ +KI DF S++ + ++R GTP + A
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLA 190
Query: 295 PECCLGLTYGG--KAADTWAVGVTLYYMIIGQYPFLGETLQDTY-DKIVNNSLVFPDAMN 351
PE + + G +A D W++GV L+ + G PF Q + D+I + F +
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 352 PELR----NLLEGLLCKDPTRRLTLNDVAKHTWV 381
E+ +L++ LL DP R T + +H W+
Sbjct: 251 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 35/275 (12%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G + V + G+ +A+K ++K +P + D++RE I ML+HP+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVD---VAKFTSSPG-LSTEDLKREASICHMLKHPH 89
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRDIVS 237
IV L+E + YMV E+++G K + GF E++A Y+R I+
Sbjct: 90 IVELLETYS--SDGMLYMVFEFMDGADLCFEIVKRADAGF----VYSEAVASHYMRQILE 143
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAP---SGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
L Y H +N++H D+KP +L+A S VK+G F V+ + V GTP F A
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNP-- 352
PE Y GK D W GV L+ ++ G PF G T + ++ I+ MNP
Sbjct: 204 PEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKY----KMNPRQ 257
Query: 353 ------ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++L+ +L DP R+T+ + H W+
Sbjct: 258 WSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 137/311 (44%), Gaps = 45/311 (14%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDV 171
G + + V KIG G+YG V R+ L G+ A+K K+R+ +E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTA 52
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMA 228
RE+ ++K L HPNIV L++VI N Y+V E+V+ D F A I +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENK--LYLVFEHVDQ--DLKKFMDASALTGIPLPLI 108
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ YL ++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NS 343
T + APE LG Y A D W++G M+ + F G++ D +I +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 344 LVFPDAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHT 379
+V+P + P L R+LL +L DP +R++ H
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 380 WVLGDNGPIPQ 390
+ P+P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 35/275 (12%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G + V + G+ +A+K ++K +P + D++RE I ML+HP+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVD---VAKFTSSPG-LSTEDLKREASICHMLKHPH 87
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRDIVS 237
IV L+E + YMV E+++G K + GF E++A Y+R I+
Sbjct: 88 IVELLETYS--SDGMLYMVFEFMDGADLCFEIVKRADAGF----VYSEAVASHYMRQILE 141
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAP---SGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
L Y H +N++H D+KP +L+A S VK+G F V+ + V GTP F A
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNP-- 352
PE Y GK D W GV L+ ++ G PF G T + ++ I+ MNP
Sbjct: 202 PEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKY----KMNPRQ 255
Query: 353 ------ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++L+ +L DP R+T+ + H W+
Sbjct: 256 WSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G + K + + +A K KS L K P + + E+ I + L H +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK----PHQREKMSM--EISIHRSLAHQH 82
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
+V +D +D ++VLE + + + A+ E AR YLR IV G YLH +
Sbjct: 83 VVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG 305
V+H D+K NL + VKIGDF ++ E D + + GTP + APE L+ G
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV---LSKKG 197
Query: 306 KA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
+ D W++G +Y +++G+ PF L++TY +I N P +NP +L++ +L
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 257
Query: 364 KDPTRRLTLNDV 375
DPT R T+N++
Sbjct: 258 TDPTARPTINEL 269
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 9/263 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I ++ + +G GS+GKV L + +AIKA K + + + T V + VL
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKD----VVLMDDDVECTMVEKRVL 72
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + ++ ++ + V+EY+ G S A Y +I+
Sbjct: 73 SLAW-EHPFLTHMFCTFQ--TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 129
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL +LH +V+ D+K DN+L+ G +KI DF + + + GTP + APE
Sbjct: 130 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPE 189
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
LG Y + D W+ GV LY M+IGQ PF G+ ++ + I ++ +P + E ++
Sbjct: 190 ILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
Query: 357 LLEGLLCKDPTRRLTLN-DVAKH 378
LL L ++P +RL + D+ +H
Sbjct: 249 LLVKLFVREPEKRLGVRGDIRQH 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G + K + + +A K KS L K P + + E+ I + L H +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK----PHQREKMSM--EISIHRSLAHQH 78
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
+V +D +D ++VLE + + + A+ E AR YLR IV G YLH +
Sbjct: 79 VVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG 305
V+H D+K NL + VKIGDF ++ E D + + GTP + APE L+ G
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV---LSKKG 193
Query: 306 KA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
+ D W++G +Y +++G+ PF L++TY +I N P +NP +L++ +L
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 253
Query: 364 KDPTRRLTLNDV 375
DPT R T+N++
Sbjct: 254 TDPTARPTINEL 265
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G + K + + +A K KS L K P + + E+ I + L H +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK----PHQREKMSM--EISIHRSLAHQH 76
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
+V +D +D ++VLE + + + A+ E AR YLR IV G YLH +
Sbjct: 77 VVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG 305
V+H D+K NL + VKIGDF ++ E D + + GTP + APE L+ G
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV---LSKKG 191
Query: 306 KA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
+ D W++G +Y +++G+ PF L++TY +I N P +NP +L++ +L
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 251
Query: 364 KDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
DPT R T+N++ + +G IP L
Sbjct: 252 TDPTARPTINELLNDEFF--TSGYIPARL 278
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP+NLL+ G +K+ DF +++ F T +
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 384 DNGPIPQ 390
P+P
Sbjct: 291 VTKPVPH 297
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G + K + + +A K KS L K P + + E+ I + L H +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK----PHQREKMSM--EISIHRSLAHQH 78
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
+V +D +D ++VLE + + + A+ E AR YLR IV G YLH +
Sbjct: 79 VVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG 305
V+H D+K NL + VKIGDF ++ E D + + GTP + APE L+ G
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV---LSKKG 193
Query: 306 KA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
+ D W++G +Y +++G+ PF L++TY +I N P +NP +L++ +L
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 253
Query: 364 KDPTRRLTLNDV 375
DPT R T+N++
Sbjct: 254 TDPTARPTINEL 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 52
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E+V D F A I + + YL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENK--LYLVFEHVHQ--DLKTFMDASALTGIPLPLIKSYL 108
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 384 DNGPIPQ 390
P+P
Sbjct: 289 VTKPVPH 295
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 20/279 (7%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+++ Y ++G G++G V G ++A +K + P E+ VR+E+
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFA---------AKFVMTPHESDKETVRKEI 99
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFG-QPGAIGESMARKYLRD 234
M +L+HP +VNL + +D N M+ E++ G + + + E A +Y+R
Sbjct: 100 QTMSVLRHPTLVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAP--SGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+ GL ++H +N VH D+KP+N++ S +K+ DF ++ D ++ + GT F
Sbjct: 158 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEF 216
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA--- 349
APE G G D W+VGV Y ++ G PF GE +T + + D+
Sbjct: 217 AAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 275
Query: 350 -MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
++ + ++ + LL DP R+T++ +H W+ N P
Sbjct: 276 GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 314
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 136/311 (43%), Gaps = 45/311 (14%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDV 171
G + + V KIG G+YG V R+ L G+ A+K K+R+ +E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTA 52
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMA 228
RE+ ++K L HPNIV L++VI N Y+V E++ D F A I +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLI 108
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ YL ++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NS 343
T + APE LG Y A D W++G M+ + F G++ D +I +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 344 LVFPDAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHT 379
+V+P + P L R+LL +L DP +R++ H
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 380 WVLGDNGPIPQ 390
+ P+P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP+NLL+ G +K+ DF +++ F T +
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 384 DNGPIPQ 390
P+P
Sbjct: 292 VTKPVPH 298
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G + K + + +A K KS L K P + + E+ I + L H +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK----PHQREKMSM--EISIHRSLAHQH 100
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
+V +D +D ++VLE + + + A+ E AR YLR IV G YLH +
Sbjct: 101 VVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG 305
V+H D+K NL + VKIGDF ++ E D + + GTP + APE L+ G
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV---LSKKG 215
Query: 306 KA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
+ D W++G +Y +++G+ PF L++TY +I N P +NP +L++ +L
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 275
Query: 364 KDPTRRLTLNDV 375
DPT R T+N++
Sbjct: 276 TDPTARPTINEL 287
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP+NLL+ G +K+ DF +++ F T +
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 384 DNGPIPQ 390
P+P
Sbjct: 291 VTKPVPH 297
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 56
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKKFMDASALTGIPLPLIKSYL 112
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP+NLL+ G +K+ DF +++ F T +
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 384 DNGPIPQ 390
P+P
Sbjct: 293 VTKPVPH 299
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKDFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP+NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 136/311 (43%), Gaps = 45/311 (14%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDV 171
G + + V KIG G+YG V R+ L G+ A+K K+R+ +E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTA 52
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMA 228
RE+ ++K L HPNIV L++VI N Y+V E++ D F A I +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKTFMDASALTGIPLPLI 108
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ YL ++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NS 343
T + APE LG Y A D W++G M+ + F G++ D +I +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 344 LVFPDAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHT 379
+V+P + P L R+LL +L DP +R++ H
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 380 WVLGDNGPIPQ 390
+ P+P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 45/309 (14%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRR 173
+ + + V KIG G+YG V R+ L G+ A+K K+R+ +E + R
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIR 58
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
E+ ++K L HPNIV L++VI N Y+V E++ D F A I + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKS 114
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
YL ++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLV 345
+ APE LG Y A D W++G M+ + F G++ D +I + +V
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 346 FPDAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+P + P L R+LL +L DP +R++ H +
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 382 LGDNGPIPQ 390
P+P
Sbjct: 295 QDVTKPVPH 303
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 170
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 384 DNGPIPQ 390
P+P
Sbjct: 291 VTKPVPH 297
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G + K + + +A K KS L K P + + E+ I + L H +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK----PHQREKMSM--EISIHRSLAHQH 102
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
+V +D +D ++VLE + + + A+ E AR YLR IV G YLH +
Sbjct: 103 VVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 246 NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGG 305
V+H D+K NL + VKIGDF ++ E D + + GTP + APE L+ G
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV---LSKKG 217
Query: 306 KA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLC 363
+ D W++G +Y +++G+ PF L++TY +I N P +NP +L++ +L
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 277
Query: 364 KDPTRRLTLNDV 375
DPT R T+N++
Sbjct: 278 TDPTARPTINEL 289
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 20/279 (7%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+++ Y ++G G++G V G ++A +K + P E+ VR+E+
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFA---------AKFVMTPHESDKETVRKEI 205
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFG-QPGAIGESMARKYLRD 234
M +L+HP +VNL + +D N M+ E++ G + + + E A +Y+R
Sbjct: 206 QTMSVLRHPTLVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAP--SGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+ GL ++H +N VH D+KP+N++ S +K+ DF ++ D ++ + GT F
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEF 322
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA--- 349
APE G G D W+VGV Y ++ G PF GE +T + + D+
Sbjct: 323 AAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 381
Query: 350 -MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
++ + ++ + LL DP R+T++ +H W+ N P
Sbjct: 382 GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 420
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 45/309 (14%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRR 173
+ + + V KIG G+YG V R+ L G+ A+K K+R+ +E + R
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIR 58
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
E+ ++K L HPNIV L++VI N Y+V E++ D F A I + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKS 114
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
YL ++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLV 345
+ APE LG Y A D W++G M+ + F G++ D +I + +V
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 346 FPDAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+P + P L R+LL +L DP +R++ H +
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 382 LGDNGPIPQ 390
P+P
Sbjct: 295 QDVTKPVPH 303
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 56
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 112
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 384 DNGPIPQ 390
P+P
Sbjct: 293 VTKPVPH 299
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 384 DNGPIPQ 390
P+P
Sbjct: 292 VTKPVPH 298
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 52
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 108
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 384 DNGPIPQ 390
P+P
Sbjct: 289 VTKPVPH 295
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 384 DNGPIPQ 390
P+P
Sbjct: 291 VTKPVPH 297
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 49/320 (15%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 57
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 113
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 173
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Query: 384 DNGPIPQYLCWCKRDRLRRD 403
P+P + +R RD
Sbjct: 294 VTKPVPH----LRLERPHRD 309
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 52
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 108
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 384 DNGPIPQ 390
P+P
Sbjct: 289 VTKPVPH 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 52
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 108
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 384 DNGPIPQ 390
P+P
Sbjct: 289 VTKPVPH 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 133/301 (44%), Gaps = 45/301 (14%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 58
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 59 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L + H H V+H D+KP NLL+ G +K+ DF +++ F T + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFPDAMN-- 351
LG Y A D W++G M+ + F G++ D +I + +V+P +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 352 ------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIP 389
P L R+LL +L DP +R++ H + P+P
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
Query: 390 Q 390
Sbjct: 295 H 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 384 DNGPIPQ 390
P+P
Sbjct: 292 VTKPVPH 298
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 384 DNGPIPQ 390
P+P
Sbjct: 291 VTKPVPH 297
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 57
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 113
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 173
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Query: 384 DNGPIPQ 390
P+P
Sbjct: 294 VTKPVPH 300
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 56
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKDFMDASALTGIPLPLIKSYL 112
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 384 DNGPIPQ 390
P+P
Sbjct: 293 VTKPVPH 299
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKDFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 384 DNGPIPQ 390
P+P
Sbjct: 292 VTKPVPH 298
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 17/257 (6%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + K S++A R+ IM
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIK----RSDSAFFWEERD--IM 129
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E A+ Y ++V
Sbjct: 130 AFANSPWVVQLFCAFQD--DKYLYMVMEYMPGG-DLVNLMSNYDVPEKWAKFYTAEVVLA 186
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV-LRRSPGTPVFTAPEC 297
L +H ++H D+KPDN+L+ G +K+ DF ++ V + GTP + +PE
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
Query: 298 CL---GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--NSLVFPDAMNP 352
G Y G+ D W+VGV L+ M++G PF ++L TY KI++ NSL FP+ +
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPE--DA 304
Query: 353 ELRNLLEGLLCKDPTRR 369
E+ + L+C T R
Sbjct: 305 EISKHAKNLICAFLTDR 321
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 13/276 (4%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ + Y+ R +G G + K + +A K KS L L+ E T E
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMST----E 76
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 77 IAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 134
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ G+ YLH + V+H D+K NL + VKIGDF ++ E D + + GTP + A
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 194
Query: 295 PE--CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNP 352
PE C G ++ D W++G LY +++G+ PF L++TY +I N P +NP
Sbjct: 195 PEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 251
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPI 388
L+ +L DPT R ++ ++ + P+
Sbjct: 252 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPM 287
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 15/277 (5%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+ + Y+ R +G G + K + +D K +A K KS L L+ E T
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI-TDMDTKEVFAGKVVPKSML--LKPHQKEKMST---- 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
+ G+ YLH + V+H D+K NL + VKIGDF ++ E D + + GTP +
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 294 APE--CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
APE C G ++ D W++G LY +++G+ PF L++TY +I N P +N
Sbjct: 210 APEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN 266
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPI 388
P L+ +L DPT R ++ ++ + P+
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPM 303
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A L K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVA--------LXKIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 384 DNGPIPQ 390
P+P
Sbjct: 290 VTKPVPH 296
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 45/307 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A L K+R+ +E + RE+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVA--------LXKIRLDTETEGVPSTAIREI 52
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 108
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
+ P L R+LL +L DP +R++ H +
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 384 DNGPIPQ 390
P+P
Sbjct: 289 VTKPVPH 295
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 15/277 (5%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+ + Y+ R +G G + K + +D K +A K KS L L+ E T
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI-TDMDTKEVFAGKVVPKSML--LKPHQKEKMST---- 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
+ G+ YLH + V+H D+K NL + VKIGDF ++ E D + + GTP +
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 294 APE--CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
APE C G ++ D W++G LY +++G+ PF L++TY +I N P +N
Sbjct: 210 APEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN 266
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPI 388
P L+ +L DPT R ++ ++ + P+
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPM 303
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 136/304 (44%), Gaps = 31/304 (10%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
TK + Y ++G G++ V G +A K + LS +
Sbjct: 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLE 76
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
RE I + LQHPNIV L + I + + Y+V + V G + E+ A +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGT 289
+ I+ + Y H + +VH ++KP+NLL+A VK+ DF ++ + +D++ GT
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGT 193
Query: 290 PVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP-- 347
P + +PE Y K D WA GV LY +++G PF E Y +I + +P
Sbjct: 194 PGYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 252
Query: 348 --DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLRRDNT 405
D + PE ++L++ +L +P +R+T + K W+ C R+R+
Sbjct: 253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI-------------CNRERVASAIH 299
Query: 406 TQDS 409
QD+
Sbjct: 300 RQDT 303
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 15/277 (5%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+ + Y+ R +G G + K + +D K +A K KS L L+ E T
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI-TDMDTKEVFAGKVVPKSML--LKPHQKEKMST---- 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFT 293
+ G+ YLH + V+H D+K NL + VKIGDF ++ E D + + GTP +
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 294 APE--CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
APE C G ++ D W++G LY +++G+ PF L++TY +I N P +N
Sbjct: 210 APEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN 266
Query: 352 PELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPI 388
P L+ +L DPT R ++ ++ + P+
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPM 303
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 31/303 (10%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
TK + Y ++G G++ V G +A K + LS +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLE 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
RE I + LQHPNIV L + I + + Y+V + V G + E+ A +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCI 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGT 289
+ I+ + Y H + +VH ++KP+NLL+A VK+ DF ++ + +D++ GT
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGT 170
Query: 290 PVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP-- 347
P + +PE Y K D WA GV LY +++G PF E Y +I + +P
Sbjct: 171 PGYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 229
Query: 348 --DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLRRDNT 405
D + PE ++L++ +L +P +R+T + K W+ C R+R+
Sbjct: 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI-------------CNRERVASAIH 276
Query: 406 TQD 408
QD
Sbjct: 277 RQD 279
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 31/302 (10%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
TK + Y ++G G++ V G +A K + LS + R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLER 53
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I + LQHPNIV L + I + S H Y+V + V G + E+ A ++
Sbjct: 54 EARICRKLQHPNIVRLHDSIQE-ESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQ 111
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
I+ + Y H + +VH ++KP+NLL+A VK+ DF ++ + +D++ GTP
Sbjct: 112 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTP 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP--- 347
+ +PE Y K D WA GV LY +++G PF E Y +I + +P
Sbjct: 171 GYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE 229
Query: 348 -DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLRRDNTT 406
D + PE ++L++ +L +P +R+T + K W+ C R+R+
Sbjct: 230 WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI-------------CNRERVASAIHR 276
Query: 407 QD 408
QD
Sbjct: 277 QD 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 18/276 (6%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
TK + Y ++G G++ V G +A K + LS +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLE 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
RE I + LQHPNIV L + I + S H Y+V + V G + E+ A +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQE-ESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCI 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGT 289
+ I+ + Y H + +VH ++KP+NLL+A VK+ DF ++ + +D++ GT
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGT 170
Query: 290 PVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP-- 347
P + +PE Y K D WA GV LY +++G PF E Y +I + +P
Sbjct: 171 PGYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 229
Query: 348 --DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
D + PE ++L++ +L +P +R+T + K W+
Sbjct: 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 141/284 (49%), Gaps = 37/284 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++ IG G++G+V + + + YA+K +K + K +ETA R+VL+ Q
Sbjct: 95 IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLK----RAETACFREERDVLVNGDCQ 150
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRD 234
I L D N H Y+V++Y G K+++ + E MAR Y+ +
Sbjct: 151 W--ITALHYAFQDEN--HLYLVMDYYVGGDLLTLLSKFED-------KLPEDMARFYIGE 199
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRR-SPGTPVFT 293
+V + +H + VH DIKPDN+L+ +G +++ DF DD V + GTP +
Sbjct: 200 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 259
Query: 294 APECCLGLTYG----GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNS--LVFP 347
+PE + G G D W++GV +Y M+ G+ PF E+L +TY KI+N+ FP
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
Query: 348 DA---MNPELRNLLEGLLCKDPTRRLTLN---DVAKHTWVLGDN 385
++ E ++L++ L+C RRL N D KH + G N
Sbjct: 320 SHVTDVSEEAKDLIQRLICS-RERRLGQNGIEDFKKHAFFEGLN 362
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 23/277 (8%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++ IG G++G+V + + + YA+K +K + K +ETA R+VL+ Q
Sbjct: 79 IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLK----RAETACFREERDVLVNGDCQ 134
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEY-VEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
I L D N H Y+V++Y V G + E MAR Y+ ++V +
Sbjct: 135 W--ITALHYAFQDEN--HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRR-SPGTPVFTAPECCLG 300
+H + VH DIKPDN+L+ +G +++ DF DD V + GTP + +PE
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 301 LTYG----GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNS--LVFPDA---MN 351
+ G G D W++GV +Y M+ G+ PF E+L +TY KI+N+ FP ++
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 310
Query: 352 PELRNLLEGLLCKDPTRRLTLN---DVAKHTWVLGDN 385
E ++L++ L+C RRL N D KH + G N
Sbjct: 311 EEAKDLIQRLICS-RERRLGQNGIEDFKKHAFFEGLN 346
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H H V+H D+KP NLL+ G +K+ DF +++ F T +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFP 347
APE LG Y A D W++G M+ + F G++ D +I + +V+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 348 DAMN--------------------PEL----RNLLEGLLCKDPTRRLTLNDVAKHTW 380
+ P L R+LL +L DP +R++ H +
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 139/309 (44%), Gaps = 61/309 (19%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR-VAPSETAMTDVRREVLIMKMLQHP 184
IG GSYG V R +++ + AI+A + +K+R + P + + ++ EV +MK L HP
Sbjct: 34 IGQGSYGVV---RVAIENQTRAIRAIKIMNKNKIRQINPKD--VERIKTEVRLMKKLHHP 88
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGK--------WDNDGFGQ----------------- 219
NI L EV +D + +V+E G + +D G+
Sbjct: 89 NIARLYEVYED--EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 220 ----PGAIG-----------ESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA--PS 262
G+I E + +R I S L YLH + H DIKP+N L + S
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 263 GTVKIGDFSVSQVFEDDNDV----LRRSPGTPVFTAPEC--CLGLTYGGKAADTWAVGVT 316
+K+ DF +S+ F N+ + GTP F APE +YG K D W+ GV
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC-DAWSAGVL 265
Query: 317 LYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKDPTRRLTL 372
L+ +++G PF G DT +++N L F + ++P R+LL LL ++ R
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325
Query: 373 NDVAKHTWV 381
+H W+
Sbjct: 326 MRALQHPWI 334
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 21/281 (7%)
Query: 110 DENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT 169
DEN + + +R IG GS+GKV + + + K YA+K +K + +
Sbjct: 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE------RNEVR 60
Query: 170 DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
+V +E+ IM+ L+HP +VNL D + +MV++ + G Q E +
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQD--EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVK 118
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGT 289
++ ++V L YL ++H D+KPDN+L+ G V I DF+++ + + + + GT
Sbjct: 119 LFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA-GT 177
Query: 290 PVFTAPECCLGLTYGGK--AADTWAVGVTLYYMIIGQYPF------LGETLQDTYDKIVN 341
+ APE G A D W++GVT Y ++ G+ P+ + + T++ V
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV- 236
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLT-LNDVAKHTWV 381
+ +P A + E+ +LL+ LL +P +R + L+DV ++
Sbjct: 237 --VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + + P +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPE-----NIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + + P +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPE-----NIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+ ++ V+ +G G+YG+V L + + + A+K + ++++E+
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIKKEI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
I KML H N+V + N Y+ LEY G D + E A+++ +
Sbjct: 55 CINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 112
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTPVFT 293
++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT +
Sbjct: 113 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP-DAM 350
APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P +
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 232
Query: 351 NPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
+ LL +L ++P+ R+T+ D+ K W
Sbjct: 233 DSAPLALLHKILVENPSARITIPDIKKDRW 262
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEIXINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK---RIKMKQGETLALNERIMLS 243
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 244 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL ++H VV+ D+KP N+L+ G V+I D ++ F S GT + APE
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPE 359
Query: 297 CCL-GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYD---KIVNNSLVFPDAMNP 352
G+ Y +AD +++G L+ ++ G PF +D ++ + ++ PD+ +P
Sbjct: 360 VLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 418
Query: 353 ELRNLLEGLLCKDPTRRL 370
ELR+LLEGLL +D RRL
Sbjct: 419 ELRSLLEGLLQRDVNRRL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK---RIKMKQGETLALNERIMLS 244
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL ++H VV+ D+KP N+L+ G V+I D ++ F S GT + APE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPE 360
Query: 297 CCL-GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYD---KIVNNSLVFPDAMNP 352
G+ Y +AD +++G L+ ++ G PF +D ++ + ++ PD+ +P
Sbjct: 361 VLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 353 ELRNLLEGLLCKDPTRRL 370
ELR+LLEGLL +D RRL
Sbjct: 420 ELRSLLEGLLQRDVNRRL 437
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK---RIKMKQGETLALNERIMLS 244
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL ++H VV+ D+KP N+L+ G V+I D ++ F S GT + APE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPE 360
Query: 297 CCL-GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYD---KIVNNSLVFPDAMNP 352
G+ Y +AD +++G L+ ++ G PF +D ++ + ++ PD+ +P
Sbjct: 361 VLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 353 ELRNLLEGLLCKDPTRRL 370
ELR+LLEGLL +D RRL
Sbjct: 420 ELRSLLEGLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK---RIKMKQGETLALNERIMLS 244
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL ++H VV+ D+KP N+L+ G V+I D ++ F S GT + APE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPE 360
Query: 297 CCL-GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYD---KIVNNSLVFPDAMNP 352
G+ Y +AD +++G L+ ++ G PF +D ++ + ++ PD+ +P
Sbjct: 361 VLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 353 ELRNLLEGLLCKDPTRRL 370
ELR+LLEGLL +D RRL
Sbjct: 420 ELRSLLEGLLQRDVNRRL 437
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 40/296 (13%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
M+ +Y + KIG GSYG V R+ G+ AIK F L RE+
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-------LESEDDPVIKKIALREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++K L+HPN+VNL+EV H +V EY + ++ + E + +
Sbjct: 54 RMLKQLKHPNLVNLLEVFRRKRRLH--LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT 111
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ + + H HN +H D+KP+N+L+ +K+ DF +++ +D T + +P
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIG-----------QYPFLGETLQDT---YDKIVN 341
E +G T G D WA+G ++ G Q + +TL D + ++ +
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231
Query: 342 NSLVF-------PDAMNP-ELR---------NLLEGLLCKDPTRRLTLNDVAKHTW 380
+ F P+ M P EL+ LL+G L DPT RLT + H +
Sbjct: 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I ML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINAMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 25/267 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR----VAPSETAMTDVRREV 175
++ R +G G +G+V + GK YA K +K L K + + + V
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSD----HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++ +L V+ N H Y V E DN GF +P AI Y
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE------DNPGFQEPRAI------FY 294
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
IVSGL +LH N+++ D+KP+N+L+ G V+I D ++ + + GTP
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQ--DTYDKIVNNSLVFP 347
F APE LG Y + D +A+GVTLY MI + PF GE ++ + +++ ++ +P
Sbjct: 355 FMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLND 374
D +P ++ E LL KDP +RL D
Sbjct: 414 DKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 25/267 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR----VAPSETAMTDVRREV 175
++ R +G G +G+V + GK YA K +K L K + + + V
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSD----HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++ +L V+ N H Y V E DN GF +P AI Y
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE------DNPGFQEPRAI------FY 294
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
IVSGL +LH N+++ D+KP+N+L+ G V+I D ++ + + GTP
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQ--DTYDKIVNNSLVFP 347
F APE LG Y + D +A+GVTLY MI + PF GE ++ + +++ ++ +P
Sbjct: 355 FMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLND 374
D +P ++ E LL KDP +RL D
Sbjct: 414 DKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 25/267 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR----VAPSETAMTDVRREV 175
++ R +G G +G+V + GK YA K +K L K + + + V
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSD----HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++ +L V+ N H Y V E DN GF +P AI Y
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE------DNPGFQEPRAI------FY 294
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
IVSGL +LH N+++ D+KP+N+L+ G V+I D ++ + + GTP
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQ--DTYDKIVNNSLVFP 347
F APE LG Y + D +A+GVTLY MI + PF GE ++ + +++ ++ +P
Sbjct: 355 FMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLND 374
D +P ++ E LL KDP +RL D
Sbjct: 414 DKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 25/267 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR----VAPSETAMTDVRREV 175
++ R +G G +G+V + GK YA K +K L K + + + V
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSD----HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++ +L V+ N H Y V E DN GF +P AI Y
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE------DNPGFQEPRAI------FY 294
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
IVSGL +LH N+++ D+KP+N+L+ G V+I D ++ + + GTP
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQ--DTYDKIVNNSLVFP 347
F APE LG Y + D +A+GVTLY MI + PF GE ++ + +++ ++ +P
Sbjct: 355 FMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLND 374
D +P ++ E LL KDP +RL D
Sbjct: 414 DKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 115 KMINE-YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR- 172
K+INE Y V K+G G V L ++ AIKA + + P E T R
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKA--------IFIPPREKEETLKRF 58
Query: 173 -REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
REV L H NIV++I+V D D +Y+V+EY+EG ++ G + A +
Sbjct: 59 EREVHNSSQLSHQNIVSMIDV--DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFED-----DNDVLRRS 286
I+ G+ + H +VH DIKP N+L+ + T+KI DF +++ + N VL
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL--- 173
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET 331
GT + +PE G + D +++G+ LY M++G+ PF GET
Sbjct: 174 -GTVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+ G+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN--DVLRRSPGTP 290
+++G++YLHG + H DIKP+NLL+ +KI DF ++ VF +N +L + GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFP- 347
+ APE + + D W+ G+ L M+ G+ P+ ++ Q+ D + + P
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
++ LL +L ++P+ R+T+ D+ K W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 129/292 (44%), Gaps = 45/292 (15%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ-HP 184
+G G+Y KV S +GK YA+K K + + + V REV + Q +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQ---------AGHSRSRVFREVETLYQCQGNK 71
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
NI+ LIE +D FY+V E ++G + E A + +RD+ + L +LH
Sbjct: 72 NILELIEFFEDDT--RFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHT 129
Query: 245 HNVVHGDIKPDNLLV-APS--GTVKIGDFSVSQVFEDDNDV-------LRRSPGTPVFTA 294
+ H D+KP+N+L +P VKI DF + + +N L G+ + A
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 295 PECCLGL----TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDT--------------- 335
PE T+ K D W++GV LY M+ G PF+G D
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 249
Query: 336 YDKIVNNSLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
++ I FPD ++ E ++L+ LL +D +RL+ V +H WV G
Sbjct: 250 FESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 144/321 (44%), Gaps = 48/321 (14%)
Query: 103 NKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR-- 160
NK ++ +D K IN+Y +R + G + K++L D K YA+K + KS L K R
Sbjct: 20 NKYVKEKD----KYINDYRIIRTLNQGKFNKIIL--CEKDNKFYALKKYEKSLLEKKRDF 73
Query: 161 ------VAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG---- 210
++ D + E+ I+ +++ + +I N D Y++ EY+E
Sbjct: 74 TKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII--TNYDEVYIIYEYMENDSIL 131
Query: 211 KWDNDGF----GQPGAIGESMARKYLRDIVSGLMYLHGH-NVVHGDIKPDNLLVAPSGTV 265
K+D F I + + ++ +++ Y+H N+ H D+KP N+L+ +G V
Sbjct: 132 KFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRV 191
Query: 266 KIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLG-LTYGGKAADTWAVGVTLYYMIIGQ 324
K+ DF S+ D ++ S GT F PE +Y G D W++G+ LY M
Sbjct: 192 KLSDFGESEYMVDKK--IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 325 YPF-LGETLQDTYDKIVNNSLVFP-------------------DAMNPELRNLLEGLLCK 364
PF L +L + ++ I ++ +P + ++ E + L+ L K
Sbjct: 250 VPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRK 309
Query: 365 DPTRRLTLNDVAKHTWVLGDN 385
+P R+T D KH W+ N
Sbjct: 310 NPAERITSEDALKHEWLADTN 330
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 27/279 (9%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+++ YV KIG GS G V L R G+ A+K + LR + + EV
Sbjct: 46 LLDSYV---KIGEGSTGIVCLAREKHSGRQVAVK------MMDLRKQQRRELLFN---EV 93
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+IM+ QH N+V + + + ++++E+++G D Q E +A +
Sbjct: 94 VIMRDYQHFNVVEMYK--SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-TVCEAV 150
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ L YLH V+H DIK D++L+ G VK+ DF D + GTP + AP
Sbjct: 151 LQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET-------LQDTYDKIVNNSLVFPD 348
E Y + D W++G+ + M+ G+ P+ ++ L+D+ + NS
Sbjct: 211 EVISRSLYATE-VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS----H 265
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
++P LR+ LE +L +DP R T ++ H ++L P
Sbjct: 266 KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLP 304
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 22/273 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYR--SSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+++ ++ +G GS+GKV L + S D + YA+K K+ L K+R + T + R+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVR----DRVRTKMERD 78
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+L+ + HP IV L Y++L+++ G + E + YL +
Sbjct: 79 ILVE--VNHPFIVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ L +LH +++ D+KP+N+L+ G +K+ DF +S+ D GT + A
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 295 PECC--LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNP 352
PE G T ++AD W+ GV ++ M+ G PF G+ ++T I+ L P ++P
Sbjct: 195 PEVVNRRGHT---QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251
Query: 353 ELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
E ++LL L ++P RL + ++ +H++
Sbjct: 252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 31/287 (10%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K LR + + EV+IM+ QH
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFN---EVVIMRDYQHE 208
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLM 240
N+V + NS D ++V+E++EG D E +A L ++ L
Sbjct: 209 NVVEMY------NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALS 261
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDDNDVLRRSP--GTPVFTAPEC 297
LH V+H DIK D++L+ G VK+ DF +QV +V RR GTP + APE
Sbjct: 262 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPEL 318
Query: 298 CLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNPEL 354
L YG + D W++G+ + M+ G+ P+ E I +N L ++P L
Sbjct: 319 ISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL 377
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLR 401
+ L+ LL +DP +R T ++ KH + L GP + +++R R
Sbjct: 378 KGFLDRLLVRDPAQRATAAELLKHPF-LAKAGPPASIVPLMRQNRTR 423
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 22/273 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYR--SSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+++ ++ +G GS+GKV L + S D + YA+K K+ L K+R + T + R+
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVR----DRVRTKMERD 79
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+L+ + HP IV L Y++L+++ G + E + YL +
Sbjct: 80 ILVE--VNHPFIVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ L +LH +++ D+KP+N+L+ G +K+ DF +S+ D GT + A
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 295 PECC--LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNP 352
PE G T ++AD W+ GV ++ M+ G PF G+ ++T I+ L P ++P
Sbjct: 196 PEVVNRRGHT---QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 252
Query: 353 ELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
E ++LL L ++P RL + ++ +H++
Sbjct: 253 EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 285
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 22/273 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYR--SSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+++ ++ +G GS+GKV L + S D + YA+K K+ L K+R + T + R+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVR----DRVRTKMERD 78
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+L+ + HP IV L Y++L+++ G + E + YL +
Sbjct: 79 ILVE--VNHPFIVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ L +LH +++ D+KP+N+L+ G +K+ DF +S+ D GT + A
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 295 PECC--LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNP 352
PE G T ++AD W+ GV ++ M+ G PF G+ ++T I+ L P ++P
Sbjct: 195 PEVVNRRGHT---QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251
Query: 353 ELRNLLEGLLCKDPTRRL-----TLNDVAKHTW 380
E ++LL L ++P RL + ++ +H++
Sbjct: 252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 31/287 (10%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K LR + + EV+IM+ QH
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFN---EVVIMRDYQHE 86
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLM 240
N+V + NS D ++V+E++EG D E +A L ++ L
Sbjct: 87 NVVEMY------NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALS 139
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDDNDVLRRSP--GTPVFTAPEC 297
LH V+H DIK D++L+ G VK+ DF +QV +V RR GTP + APE
Sbjct: 140 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPEL 196
Query: 298 CLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNPEL 354
L YG + D W++G+ + M+ G+ P+ E I +N L ++P L
Sbjct: 197 ISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL 255
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLR 401
+ L+ LL +DP +R T ++ KH + L GP + +++R R
Sbjct: 256 KGFLDRLLVRDPAQRATAAELLKHPF-LAKAGPPASIVPLMRQNRTR 301
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 42/296 (14%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRRE 174
++ +Y + K+G G+YG V + S G+ A+K ++R+ A E + RE
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALK--------RIRLDAEDEGIPSTAIRE 69
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ ++K L HPNIV+LI+VI +V E++E + +S + YL
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERC--LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
++ G+ + H H ++H D+KP NLL+ G +K+ DF +++ F T + A
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFPDA 349
P+ +G + D W++G MI G+ F G T D KI + N +P
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
Query: 350 MNPELR-------------------------NLLEGLLCKDPTRRLTLNDVAKHTW 380
L +LL +LC DP +R++ D H +
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 134/287 (46%), Gaps = 31/287 (10%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 88
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLM 240
N+V + NS D ++V+E++EG D E +A L ++ L
Sbjct: 89 NVVEMY------NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALS 141
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDDNDVLRRSP--GTPVFTAPEC 297
LH V+H DIK D++L+ G VK+ DF +QV +V RR GTP + APE
Sbjct: 142 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPEL 198
Query: 298 CLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNPEL 354
L YG + D W++G+ + M+ G+ P+ E I +N L ++P L
Sbjct: 199 ISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL 257
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLR 401
+ L+ LL +DP +R T ++ KH + L GP + +++R R
Sbjct: 258 KGFLDRLLVRDPAQRATAAELLKHPF-LAKAGPPASIVPLMRQNRTR 303
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 42/296 (14%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRRE 174
++ +Y + K+G G+YG V + S G+ A+K ++R+ A E + RE
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALK--------RIRLDAEDEGIPSTAIRE 69
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ ++K L HPNIV+LI+VI +V E++E + +S + YL
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERC--LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
++ G+ + H H ++H D+KP NLL+ G +K+ DF +++ F T + A
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFPDA 349
P+ +G + D W++G MI G+ F G T D KI + N +P
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
Query: 350 MNPELR-------------------------NLLEGLLCKDPTRRLTLNDVAKHTW 380
L +LL +LC DP +R++ D H +
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 134/287 (46%), Gaps = 31/287 (10%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 131
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLM 240
N+V + NS D ++V+E++EG D E +A L ++ L
Sbjct: 132 NVVEMY------NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALS 184
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDDNDVLRRSP--GTPVFTAPEC 297
LH V+H DIK D++L+ G VK+ DF +QV +V RR GTP + APE
Sbjct: 185 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPEL 241
Query: 298 CLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNPEL 354
L YG + D W++G+ + M+ G+ P+ E I +N L ++P L
Sbjct: 242 ISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL 300
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLR 401
+ L+ LL +DP +R T ++ KH + L GP + +++R R
Sbjct: 301 KGFLDRLLVRDPAQRATAAELLKHPF-LAKAGPPASIVPLMRQNRTR 346
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+Y + +G+G++G V K +K K + + + + V E+ I
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE-DCWIEDPKLGKVTLEIAI 82
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
+ ++H NI+ ++++ + N F +V+E D F + + E +A R +V
Sbjct: 83 LSRVEHANIIKVLDIFE--NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
S + YL +++H DIK +N+++A T+K+ DF S + + + GT + APE
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERGKLFYTFCGTIEYCAPE 199
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRN 356
+G Y G + W++GVTLY ++ + PF L++T + ++ P ++ EL +
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFC--ELEETVEAAIHP----PYLVSKELMS 253
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWV 381
L+ GLL P RR TL + WV
Sbjct: 254 LVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 27/271 (9%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+++G G + V S G+ YA K K + ++ E+ ++++ +
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRR-------RGQDCRAEILHEIAVLELAKS 87
Query: 184 -PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-----PGAIGESMARKYLRDIVS 237
P ++NL EV + N+ ++LEY G + F + E+ + ++ I+
Sbjct: 88 CPRVINLHEVYE--NTSEIILILEYAAG---GEIFSLCLPELAEMVSENDVIRLIKQILE 142
Query: 238 GLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
G+ YLH +N+VH D+KP N+L++ P G +KI DF +S+ + LR GTP + A
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLA 201
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPEL 354
PE L A D W +G+ Y ++ PF+GE Q+TY I ++ + + +
Sbjct: 202 PE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260
Query: 355 RNL----LEGLLCKDPTRRLTLNDVAKHTWV 381
L ++ LL K+P +R T H+W+
Sbjct: 261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 31/287 (10%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K LR + + EV+IM+ QH
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFN---EVVIMRDYQHE 77
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLM 240
N+V + NS D ++V+E++EG D E +A L ++ L
Sbjct: 78 NVVEMY------NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALS 130
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDDNDVLRRSP--GTPVFTAPEC 297
LH V+H DIK D++L+ G VK+ DF +QV +V RR GTP + APE
Sbjct: 131 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPEL 187
Query: 298 CLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNPEL 354
L YG + D W++G+ + M+ G+ P+ E I +N L ++P L
Sbjct: 188 ISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL 246
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLR 401
+ L+ LL +DP +R T ++ KH + L GP + +++R R
Sbjct: 247 KGFLDRLLVRDPAQRATAAELLKHPF-LAKAGPPASIVPLMRQNRTR 292
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 31/287 (10%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K LR + + EV+IM+ QH
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFN---EVVIMRDYQHE 81
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLM 240
N+V + NS D ++V+E++EG D E +A L ++ L
Sbjct: 82 NVVEMY------NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALS 134
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDDNDVLRRSP--GTPVFTAPEC 297
LH V+H DIK D++L+ G VK+ DF +QV +V RR GTP + APE
Sbjct: 135 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPEL 191
Query: 298 CLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNPEL 354
L YG + D W++G+ + M+ G+ P+ E I +N L ++P L
Sbjct: 192 ISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL 250
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCWCKRDRLR 401
+ L+ LL +DP +R T ++ KH + L GP + +++R R
Sbjct: 251 KGFLDRLLVRDPAQRATAAELLKHPF-LAKAGPPASIVPLMRQNRTR 296
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 72 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L +LH + V+H DIK DN+L+ G+VK+ DF + GTP + APE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET-LQDTYDKIVNNSLVFPDAMNPE---- 353
YG K D W++G+ MI G+ P+L E L+ Y N + P+ NPE
Sbjct: 189 TRKAYGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---PELQNPEKLSA 244
Query: 354 -LRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
R+ L L D +R + ++ +H ++
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 72
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 73 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L +LH + V+H DIK DN+L+ G+VK+ DF + GTP + APE
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET-LQDTYDKIVNNSLVFPDAMNPE---- 353
YG K D W++G+ MI G+ P+L E L+ Y N + P+ NPE
Sbjct: 190 TRKAYGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---PELQNPEKLSA 245
Query: 354 -LRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
R+ L L D +R + ++ +H ++
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 35/281 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++ IG G++G+V + + K +A+K +K + K +ETA R+VL+
Sbjct: 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK----RAETACFREERDVLVNG--D 132
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRD 234
I L D N+ Y+V++Y G K+++ + E MAR YL +
Sbjct: 133 SKWITTLHYAFQDDNN--LYLVMDYYVGGDLLTLLSKFED-------RLPEEMARFYLAE 183
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDF-SVSQVFEDDNDVLRRSPGTPVFT 293
+V + +H + VH DIKPDN+L+ +G +++ DF S ++ ED + GTP +
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 294 APECCLGLTYG----GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNS--LVFP 347
+PE + G G D W++GV +Y M+ G+ PF E+L +TY KI+N+ FP
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303
Query: 348 DA---MNPELRNLLEGLLCKDPTR--RLTLNDVAKHTWVLG 383
++ ++L+ L+C R + + D KH + G
Sbjct: 304 TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 121/273 (44%), Gaps = 26/273 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
YV IG GSY + YA+K KS + PSE ++++
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIE-------ILLR 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
QHPNI+ L +V DD H Y+V E + G D + E A L I +
Sbjct: 77 YGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 240 MYLHGHNVVHGDIKPDNLL-VAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
YLH VVH D+KP N+L V SG ++I DF ++ +N +L T F AP
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAP 194
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL---GETLQDTYDKIVNNSLVFP----D 348
E Y + D W++G+ LY M+ G PF +T ++ +I + +
Sbjct: 195 EVLKRQGY-DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ ++L+ +L DP +RLT V +H WV
Sbjct: 254 TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 72 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L +LH + V+H DIK DN+L+ G+VK+ DF + GTP + APE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET-LQDTYDKIVNNSLVFPDAMNPE---- 353
YG K D W++G+ MI G+ P+L E L+ Y N + P+ NPE
Sbjct: 189 TRKAYGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---PELQNPEKLSA 244
Query: 354 -LRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
R+ L L D +R + ++ +H ++
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 121/273 (44%), Gaps = 26/273 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
YV IG GSY + YA+K KS + PSE ++++
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIE-------ILLR 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
QHPNI+ L +V DD H Y+V E + G D + E A L I +
Sbjct: 77 YGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 240 MYLHGHNVVHGDIKPDNLL-VAPSGT---VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
YLH VVH D+KP N+L V SG ++I DF ++ +N +L T F AP
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAP 194
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL---GETLQDTYDKIVNNSLVFP----D 348
E Y + D W++G+ LY M+ G PF +T ++ +I + +
Sbjct: 195 EVLKRQGY-DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ ++L+ +L DP +RLT V +H WV
Sbjct: 254 TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 72 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L +LH + V+H DIK DN+L+ G+VK+ DF + GTP + APE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET-LQDTYDKIVNNSLVFPDAMNPE---- 353
YG K D W++G+ MI G+ P+L E L+ Y N + P+ NPE
Sbjct: 189 TRKAYGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---PELQNPEKLSA 244
Query: 354 -LRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
R+ L L D +R + ++ +H ++
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 127 GAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPS--ETAMTDVRREVLIMKMLQ-H 183
G S + ++R++ G +A+K ++ R++P E RRE I++ + H
Sbjct: 105 GVSSVVRRCVHRAT--GHEFAVKIME---VTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
P+I+ LI+ + +S ++V + + D + A+ E R +R ++ + +LH
Sbjct: 160 PHIITLIDSYE--SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE---CCLG 300
+N+VH D+KP+N+L+ + +++ DF S E + LR GTP + APE C +
Sbjct: 218 ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE-PGEKLRELCGTPGYLAPEILKCSMD 276
Query: 301 LTYG--GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPEL 354
T+ GK D WA GV L+ ++ G PF I+ F D + +
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTV 336
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTW 380
++L+ LL DP RLT +H +
Sbjct: 337 KDLISRLLQVDPEARLTAEQALQHPF 362
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 13/251 (5%)
Query: 123 VRKIGAGSYGKVVLYRSSL---DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++ +G GS+GKV L R G YA+K K+ L K+R + T + R++L
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATL-KVR----DRVRTKMERDIL--A 85
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
+ HP +V L Y++L+++ G + E + YL ++ GL
Sbjct: 86 DVNHPFVVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
+LH +++ D+KP+N+L+ G +K+ DF +S+ D GT + APE
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLE 359
+ +AD W+ GV ++ M+ G PF G+ ++T I+ L P ++ E ++LL
Sbjct: 204 RQGH-SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLR 262
Query: 360 GLLCKDPTRRL 370
L ++P RL
Sbjct: 263 ALFKRNPANRL 273
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 72
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 73 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L +LH + V+H +IK DN+L+ G+VK+ DF + GTP + APE
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET-LQDTYDKIVNNSLVFPDAMNPE---- 353
YG K D W++G+ MI G+ P+L E L+ Y N + P+ NPE
Sbjct: 190 TRKAYGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---PELQNPEKLSA 245
Query: 354 -LRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
R+ L L D +R + ++ +H ++
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 15/263 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYR--SSLD-GKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
I + ++ +G G+YGKV L R S D GK YA+K K+ + + T T R
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---KAKTTEHTRTER 109
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
+VL + Q P +V L H ++L+Y+ G Q E + Y+
Sbjct: 110 QVL-EHIRQSPFLVTLHYAFQTETKLH--LILDYINGGELFTHLSQRERFTEHEVQIYVG 166
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF-EDDNDVLRRSPGTPVF 292
+IV L +LH +++ DIK +N+L+ +G V + DF +S+ F D+ + GT +
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 293 TAPECCLGLTYG-GKAADTWAVGVTLYYMIIGQYPFL--GE--TLQDTYDKIVNNSLVFP 347
AP+ G G KA D W++GV +Y ++ G PF GE + + +I+ + +P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 286
Query: 348 DAMNPELRNLLEGLLCKDPTRRL 370
M+ ++L++ LL KDP +RL
Sbjct: 287 QEMSALAKDLIQRLLMKDPKKRL 309
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 141/302 (46%), Gaps = 31/302 (10%)
Query: 103 NKLIRSEDENGTKMINEYVHVRKIGAGSYG--KVVLYRSSLDGKHYAIKAFHKSHLSKLR 160
+ +++ N + + Y IG GSY K +++++ +A+K KS +
Sbjct: 7 HSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT--NMEFAVKIIDKS-----K 59
Query: 161 VAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP 220
P+E ++++ QHPNI+ L +V DD + Y+V E ++G D +
Sbjct: 60 RDPTEEIE-------ILLRYGQHPNIITLKDVYDD--GKYVYVVTELMKGGELLDKILRQ 110
Query: 221 GAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLL-VAPSG---TVKIGDFSVSQVF 276
E A L I + YLH VVH D+KP N+L V SG +++I DF ++
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 277 EDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG---ETLQ 333
+N +L T F APE Y A D W++GV LY M+ G PF +T +
Sbjct: 171 RAENGLLMTPCYTANFVAPEVLERQGYDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPE 229
Query: 334 DTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIP 389
+ +I + ++++ ++L+ +L DP +RLT V +H W++ + +P
Sbjct: 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD-QLP 288
Query: 390 QY 391
QY
Sbjct: 289 QY 290
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 133/320 (41%), Gaps = 38/320 (11%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y + +G G + V R + AIK H S+ + + TA+ RE+ +++
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL----REIKLLQ 67
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
L HPNI+ L++ + + +V +++E + + S + Y+ + GL
Sbjct: 68 ELSHPNIIGLLDAFG--HKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
YLH H ++H D+KP+NLL+ +G +K+ DF +++ F N T + APE
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPFLG------------ETLQDTYDKIVNNSLVFP 347
G G D WAVG L +++ + PFL ETL ++ + P
Sbjct: 186 GARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 348 D-----------------AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
D A +L +L++GL +P R+T K + GP P
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPG 304
Query: 391 YLCWCKRDRLRRDNTTQDSN 410
C R + + SN
Sbjct: 305 --CQLPRPNCPVETLKEQSN 322
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 18/233 (7%)
Query: 164 SETAMTDVRREVLIMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA 222
S+ + ++E+ +K+ + HPNIV L EV D H ++V+E + G + +
Sbjct: 45 SKRMEANTQKEITALKLCEGHPNIVKLHEVFHD--QLHTFLVMELLNGGELFERIKKKKH 102
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSG---TVKIGDFSVSQVFEDD 279
E+ A +R +VS + ++H VVH D+KP+NLL +KI DF +++ D
Sbjct: 103 FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162
Query: 280 NDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGE-------TL 332
N L+ T + APE L ++ D W++GV LY M+ GQ PF +
Sbjct: 163 NQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA 221
Query: 333 QDTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ KI F ++ E ++L++GLL DP +RL ++ + + W+
Sbjct: 222 VEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 18/275 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+Y + IG GSYG+ R DGK K +++ +E M + EV +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----AEKQM--LVSEVNL 58
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLR 233
++ L+HPNIV + I D + Y+V+EY EG G + + E + +
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 234 DIVSGLMYLH-----GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ L H GH V+H D+KP N+ + VK+GDF ++++ D D + G
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSL-VFP 347
TP + +PE ++Y K +D W++G LY + PF + ++ KI P
Sbjct: 179 TPYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 348 DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
+ EL ++ +L R ++ ++ ++ +L
Sbjct: 238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE +E D D + GA+ E +AR + ++ + +
Sbjct: 73 SGVIRLLDWFERPDS--FVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 188
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 242
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 243 LALRPSDRPTFEEIQNHPWM 262
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 71
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 72 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 129
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 187
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 241
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 242 LALRPSDRPTFEEIQNHPWM 261
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R+IG GS+G V R + + AIK S S D+ +EV ++ L+
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG------KQSNEKWQDIIKEVRFLQKLR 73
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
HPN + ++ ++V+EY G + + E + GL YL
Sbjct: 74 HPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL- 301
H HN++H D+K N+L++ G VK+GDF + + N + GTP + APE L +
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV----GTPYWMAPEVILAMD 187
Query: 302 --TYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNNSLVFPDAMNPE-LRNL 357
Y GK D W++G+T + + P + Y N S E RN
Sbjct: 188 EGQYDGK-VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246
Query: 358 LEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
++ L K P R T + KH +VL + P
Sbjct: 247 VDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 69 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRWC 238
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 239 LALRPSDRPTFEEIQNHPWM 258
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 73 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 188
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 242
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 243 LALRPSDRPTFEEIQNHPWM 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 74 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 189
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 243
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 244 LALRPSDRPTFEEIQNHPWM 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 69 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 238
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 239 LALRPSDRPTFEEIQNHPWM 258
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 88
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 89 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 204
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 258
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 259 LALRPSDRPTFEEIQNHPWM 278
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 74 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 189
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 243
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 244 LALRPSDRPTFEEIQNHPWM 263
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 87
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 88 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 203
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 257
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 258 LALRPSDRPTFEEIQNHPWM 277
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 73
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 74 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 189
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 243
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 244 LALRPSDRPTFEEIQNHPWM 263
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 69 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 184
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQHLIRWC 238
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 239 LALRPSDRPTFEEIQNHPWM 258
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R+IG GS+G V R + + AIK S S D+ +EV ++ L+
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG------KQSNEKWQDIIKEVRFLQKLR 112
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
HPN + ++ ++V+EY G + + E + GL YL
Sbjct: 113 HPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL- 301
H HN++H D+K N+L++ G VK+GDF + + N + GTP + APE L +
Sbjct: 171 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV----GTPYWMAPEVILAMD 226
Query: 302 --TYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNNSLVFPDAMNPE-LRNL 357
Y GK D W++G+T + + P + Y N S E RN
Sbjct: 227 EGQYDGK-VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 285
Query: 358 LEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
++ L K P R T + KH +VL + P
Sbjct: 286 VDSCLQKIPQDRPTSEVLLKHRFVLRERPP 315
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 107
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 108 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 165
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 223
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 277
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 278 LALRPSDRPTFEEIQNHPWM 297
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 115
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 116 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 231
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 285
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 286 LALRPSDRPTFEEIQNHPWM 305
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 87
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 88 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 203
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRWC 257
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 258 LALRPSDRPTFEEIQNHPWM 277
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 88
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 89 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 204
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRWC 258
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 259 LALRPSDRPTFEEIQNHPWM 278
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 100
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 101 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 216
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWC 270
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 271 LALRPSDRPTFEEIQNHPWM 290
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 100
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 101 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 216
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQHLIRWC 270
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 271 LALRPSDRPTFEEIQNHPWM 290
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 101
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 102 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 217
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQHLIRWC 271
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 272 LALRPSDRPTFEEIQNHPWM 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 100
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 101 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 216
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQHLIRWC 270
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 271 LALRPSDRPTFEEIQNHPWM 290
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 101
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 102 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 217
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQHLIRWC 271
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 272 LALRPSDRPTFEEIQNHPWM 291
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 95
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 96 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 153
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 211
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRWC 265
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 266 LALRPSDRPTFEEIQNHPWM 285
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 19/233 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAM-TDVRREVL 176
+Y V +IG G+YGKV R +G + L ++RV E M REV
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA-------LKRVRVQTGEEGMPLSTIREVA 63
Query: 177 IMKMLQ---HPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L+ HPN+V L +V +D +V E+V+ D +PG E++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI- 122
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ + ++ GL +LH H VVH D+KP N+LV SG +K+ DF +++++ L
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVV 181
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
T + APE L +Y D W+VG M + F G + D KI++
Sbjct: 182 TLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 101
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 102 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 217
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSXECQHLIRWC 271
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 272 LALRPSDRPTFEEIQNHPWM 291
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 19/233 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAM-TDVRREVL 176
+Y V +IG G+YGKV R +G + L ++RV E M REV
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA-------LKRVRVQTGEEGMPLSTIREVA 63
Query: 177 IMKMLQ---HPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L+ HPN+V L +V +D +V E+V+ D +PG E++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI- 122
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ + ++ GL +LH H VVH D+KP N+LV SG +K+ DF +++++ L
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVV 181
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
T + APE L +Y D W+VG M + F G + D KI++
Sbjct: 182 TLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 101
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 102 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 217
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSXECQHLIRWC 271
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 272 LALRPSDRPTFEEIQNHPWM 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 100
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 101 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 216
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSXECQHLIRWC 270
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 271 LALRPSDRPTFEEIQNHPWM 290
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 115
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 116 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 231
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRWC 285
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 286 LALRPSDRPTFEEIQNHPWM 305
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 120
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 121 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 178
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 236
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRWC 290
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P+ R T ++ H W+
Sbjct: 291 LALRPSDRPTFEEIQNHPWM 310
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 17/260 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--H 183
+G+G +G V D AIK K +S P+ T V EV+++K +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGF 88
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYL 242
++ L++ + P+S F ++LE E D D + GA+ E +AR + ++ + +
Sbjct: 89 SGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 243 HGHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H V+H DIK +N+L+ + G +K+ DF + +D V GT V++ PE
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYH 204
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGL 361
Y G++A W++G+ LY M+ G PF + ++I+ + F ++ E ++L+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRWC 258
Query: 362 LCKDPTRRLTLNDVAKHTWV 381
L P R T ++ H W+
Sbjct: 259 LALRPXDRPTFEEIQNHPWM 278
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 19/233 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAM-TDVRREVL 176
+Y V +IG G+YGKV R +G + L ++RV E M REV
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA-------LKRVRVQTGEEGMPLSTIREVA 63
Query: 177 IMKMLQ---HPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L+ HPN+V L +V +D +V E+V+ D +PG E++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI- 122
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ + ++ GL +LH H VVH D+KP N+LV SG +K+ DF +++++ L
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVV 181
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
T + APE L +Y D W+VG M + F G + D KI++
Sbjct: 182 TLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 18/274 (6%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y + IG GSYG+ R DGK K +++ +E M + EV ++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----AEKQM--LVSEVNLL 59
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRD 234
+ L+HPNIV + I D + Y+V+EY EG G + + E + +
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 235 IVSGLMYLH-----GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGT 289
+ L H GH V+H D+KP N+ + VK+GDF ++++ D + GT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 290 PVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSL-VFPD 348
P + +PE ++Y K +D W++G LY + PF + ++ KI P
Sbjct: 180 PYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 238
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
+ EL ++ +L R ++ ++ ++ +L
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 18/274 (6%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y + IG GSYG+ R DGK K +++ +E M + EV ++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----AEKQM--LVSEVNLL 59
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRD 234
+ L+HPNIV + I D + Y+V+EY EG G + + E + +
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 235 IVSGLMYLH-----GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGT 289
+ L H GH V+H D+KP N+ + VK+GDF ++++ D + GT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGT 179
Query: 290 PVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSL-VFPD 348
P + +PE ++Y K +D W++G LY + PF + ++ KI P
Sbjct: 180 PYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 238
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
+ EL ++ +L R ++ ++ ++ +L
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 31/302 (10%)
Query: 103 NKLIRSEDENGTKMINEYVHVRKIGAGSYG--KVVLYRSSLDGKHYAIKAFHKSHLSKLR 160
+ +++ N + + Y IG GSY K +++++ +A+K KS +
Sbjct: 7 HSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT--NXEFAVKIIDKS-----K 59
Query: 161 VAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP 220
P+E ++++ QHPNI+ L +V DD + Y+V E +G D +
Sbjct: 60 RDPTEEIE-------ILLRYGQHPNIITLKDVYDD--GKYVYVVTELXKGGELLDKILRQ 110
Query: 221 GAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLL-VAPSG---TVKIGDFSVSQVF 276
E A L I + YLH VVH D+KP N+L V SG +++I DF ++
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 277 EDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG---ETLQ 333
+N +L T F APE Y A D W++GV LY + G PF +T +
Sbjct: 171 RAENGLLXTPCYTANFVAPEVLERQGYDA-ACDIWSLGVLLYTXLTGYTPFANGPDDTPE 229
Query: 334 DTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIP 389
+ +I + ++++ ++L+ L DP +RLT V +H W++ + +P
Sbjct: 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWD-QLP 288
Query: 390 QY 391
QY
Sbjct: 289 QY 290
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 19/264 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA+K K + + + V+ E
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE------LVNDDEDIDWVQTEKH 72
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 73 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 130
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
L YLH +++ D+K DN+L+ G +K+ D+ + + D GTP + AP
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 190
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGET---LQDTYDK----IVNNSLVF 346
E G YG + D WA+GV ++ M+ G+ PF +G + Q+T D I+ +
Sbjct: 191 EILRGEDYGF-SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 347 PDAMNPELRNLLEGLLCKDPTRRL 370
P +M+ + ++L+ L KDP RL
Sbjct: 250 PRSMSVKAASVLKSFLNKDPKERL 273
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 129/275 (46%), Gaps = 23/275 (8%)
Query: 117 INEYVHVRK---IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+N + V K +G G +G+V + G A K + +V+
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD---------KEEVKN 135
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYL 232
E+ +M L H N++ L + + N +V+EYV+G D + + E ++
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKND--IVLVMEYVDGGELFDRIIDESYNLTELDTILFM 193
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVA--PSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
+ I G+ ++H ++H D+KP+N+L + +KI DF +++ ++ + L+ + GTP
Sbjct: 194 KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP-REKLKVNFGTP 252
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA- 349
F APE + + D W+VGV Y ++ G PFLG+ +T + I+ D
Sbjct: 253 EFLAPEV-VNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEE 311
Query: 350 ---MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ E + + LL K+ + R++ ++ KH W+
Sbjct: 312 FQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 114/265 (43%), Gaps = 20/265 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+KIG G + +V LDG A+K L + A D +E+ ++K L H
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK------ARADCIKEIDLLKQLNH 91
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRDIVSGL 239
PN++ + N +VLE + + Q I E KY + S L
Sbjct: 92 PNVIKYYASFIEDNE--LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
++H V+H DIKP N+ + +G VK+GD + + F GTP + +PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPFLGE--TLQDTYDKI--VNNSLVFPDAMNPELR 355
Y K +D W++G LY M Q PF G+ L KI + + D + ELR
Sbjct: 210 ENGYNFK-SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268
Query: 356 NLLEGLLCKDPTRRLTLN---DVAK 377
L+ + DP +R + DVAK
Sbjct: 269 QLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 118/258 (45%), Gaps = 19/258 (7%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIGAGS+G V +R+ G A+K + RV + REV IMK L+HP
Sbjct: 44 KIGAGSFGTV--HRAEWHGSDVAVKILMEQDFHAERV-------NEFLREVAIMKRLRHP 94
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR---DIVSGLMY 241
NIV + + P + +V EY+ + GA + R+ L D+ G+ Y
Sbjct: 95 NIVLFMGAVTQP--PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 242 LHGHN--VVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
LH N +VH D+K NLLV TVK+ DF +S++ + + GTP + APE L
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPE-VL 211
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
+ +D ++ GV L+ + Q P+ L L P +NP++ +
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271
Query: 358 LEGLLCKDPTRRLTLNDV 375
+EG +P +R + +
Sbjct: 272 IEGCWTNEPWKRPSFATI 289
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 22/241 (9%)
Query: 153 KSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG-- 210
K++++K V T V++E+ I+ + +H NI++L E + + + M+ E++ G
Sbjct: 31 KTYMAKF-VKVKGTDQVLVKKEISILNIARHRNILHLHESFE--SMEELVMIFEFISGLD 87
Query: 211 ---KWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP--SGTV 265
+ + F + E Y+ + L +LH HN+ H DI+P+N++ S T+
Sbjct: 88 IFERINTSAF----ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTI 143
Query: 266 KIGDF-SVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQ 324
KI +F Q+ DN R P + APE A D W++G +Y ++ G
Sbjct: 144 KIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGI 200
Query: 325 YPFLGETLQDTYDKIVNNSLVFPD----AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
PFL ET Q + I+N F + ++ E + ++ LL K+ R+T ++ +H W
Sbjct: 201 NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260
Query: 381 V 381
+
Sbjct: 261 L 261
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 22/263 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K LR + + EV+IM+ H
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFN---EVVIMRDYHHD 102
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N+V++ D ++V+E++EG D E +A L ++ L YLH
Sbjct: 103 NVVDMYS--SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCL-SVLRALSYLHN 159
Query: 245 HNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYG 304
V+H DIK D++L+ G +K+ DF + + GTP + APE L YG
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 305 GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP------DAMNPELRNLL 358
+ D W++G+ + MI G+ P+ E +I ++ P ++ LR L
Sbjct: 220 TE-VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS---LPPRVKDLHKVSSVLRGFL 275
Query: 359 EGLLCKDPTRRLTLNDVAKHTWV 381
+ +L ++P++R T ++ H ++
Sbjct: 276 DLMLVREPSQRATAQELLGHPFL 298
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 126/284 (44%), Gaps = 29/284 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ ++ IG G++ +V + + G+ YA+K +K + K E + R+VL+
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR----GEVSCFREERDVLV 116
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGE----SMARKYLR 233
I L D N + Y+V+EY G D GE MAR YL
Sbjct: 117 NG--DRRWITQLHFAFQDEN--YLYLVMEYYVG---GDLLTLLSKFGERIPAEMARFYLA 169
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRR-SPGTPVF 292
+IV + +H VH DIKPDN+L+ G +++ DF D V + GTP +
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDY 229
Query: 293 TAPECCLGLTYGGKA------ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---- 342
+PE + G D WA+GV Y M GQ PF ++ +TY KIV+
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL 289
Query: 343 SLVFPDAMNP-ELRNLLEGLLCKDPTR--RLTLNDVAKHTWVLG 383
SL D P E R+ ++ LLC TR R D H + G
Sbjct: 290 SLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFG 333
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 50/313 (15%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
G+ + Y V +IG G+YG V R G A+K+ + ++ VR
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR---VPNGGGGGGGLPISTVR 60
Query: 173 REVLIMKM--LQHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGE 225
L+ ++ +HPN+V L++V +D +V E+V+ D PG E
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 226 SMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRR 285
++ + +R + GL +LH + +VH D+KP+N+LV GTVK+ DF +++++ +
Sbjct: 121 TI-KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--- 176
Query: 286 SPGTPV-----FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
TPV + APE L TY D W+VG M + F G + D KI
Sbjct: 177 ---TPVVVTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 232
Query: 341 -------------NNSL---VFP-------DAMNPELR----NLLEGLLCKDPTRRLTLN 373
+ SL FP ++ PE+ LL +L +P +R++
Sbjct: 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 292
Query: 374 DVAKHTWVLGDNG 386
+H+++ D G
Sbjct: 293 RALQHSYLHKDEG 305
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 19/264 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA+K K + + + V+ E
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK------ELVNDDEDIDWVQTEKH 57
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 58 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 115
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
L YLH +++ D+K DN+L+ G +K+ D+ + + D GTP + AP
Sbjct: 116 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 175
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDK---------IVNNSLVF 346
E G YG + D WA+GV ++ M+ G+ PF D D+ I+ +
Sbjct: 176 EILRGEDYGF-SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
Query: 347 PDAMNPELRNLLEGLLCKDPTRRL 370
P +++ + ++L+ L KDP RL
Sbjct: 235 PRSLSVKAASVLKSFLNKDPKERL 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 19/264 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA+K K + + + V+ E
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE------LVNDDEDIDWVQTEKH 61
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 62 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 119
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
L YLH +++ D+K DN+L+ G +K+ D+ + + D GTP + AP
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDK---------IVNNSLVF 346
E G YG + D WA+GV ++ M+ G+ PF D D+ I+ +
Sbjct: 180 EILRGEDYGF-SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 238
Query: 347 PDAMNPELRNLLEGLLCKDPTRRL 370
P +++ + ++L+ L KDP RL
Sbjct: 239 PRSLSVKAASVLKSFLNKDPKERL 262
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 118/258 (45%), Gaps = 19/258 (7%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIGAGS+G V +R+ G A+K + RV + REV IMK L+HP
Sbjct: 44 KIGAGSFGTV--HRAEWHGSDVAVKILMEQDFHAERV-------NEFLREVAIMKRLRHP 94
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR---DIVSGLMY 241
NIV + + P + +V EY+ + GA + R+ L D+ G+ Y
Sbjct: 95 NIVLFMGAVTQP--PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 242 LHGHN--VVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
LH N +VH ++K NLLV TVK+ DF +S++ + + GTP + APE L
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE-VL 211
Query: 300 GLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
+ +D ++ GV L+ + Q P+ L L P +NP++ +
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271
Query: 358 LEGLLCKDPTRRLTLNDV 375
+EG +P +R + +
Sbjct: 272 IEGCWTNEPWKRPSFATI 289
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 19/264 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA++ K + + + V+ E
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKK------ELVNDDEDIDWVQTEKH 104
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 105 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
L YLH +++ D+K DN+L+ G +K+ D+ + + D GTP + AP
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP 222
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDK---------IVNNSLVF 346
E G YG + D WA+GV ++ M+ G+ PF D D+ I+ +
Sbjct: 223 EILRGEDYGF-SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 347 PDAMNPELRNLLEGLLCKDPTRRL 370
P +++ + ++L+ L KDP RL
Sbjct: 282 PRSLSVKAASVLKSFLNKDPKERL 305
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 15/265 (5%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 75
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 76 QCDSPYVTKYYGSYLKDTK---LWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 131
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L YLH +H DIK N+L++ G VK+ DF V+ D GTP + APE
Sbjct: 132 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNNSLVFPDAMNPELRNL 357
Y K AD W++G+T + G+ P ++ + NN + L+
Sbjct: 192 KQSAYDSK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 250
Query: 358 LEGLLCKDPTRRLTLNDVAKHTWVL 382
+E L K+P+ R T ++ KH ++L
Sbjct: 251 VEACLNKEPSFRPTAKELLKHKFIL 275
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 17/239 (7%)
Query: 147 AIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--HPNIVNLIEVIDDPNSDHFYMV 204
AIK K +S P+ T V EV+++K + ++ L++ + P+S F ++
Sbjct: 80 AIKHVEKDRISDWGELPNGTR---VPMEVVLLKKVSSGFSGVIRLLDWFERPDS--FVLI 134
Query: 205 LEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPS- 262
LE E D D + GA+ E +AR + ++ + + H V+H DIK +N+L+ +
Sbjct: 135 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR 194
Query: 263 GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMII 322
G +K+ DF + +D V GT V++ PE Y G++A W++G+ LY M+
Sbjct: 195 GELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
Query: 323 GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
G PF + ++I+ + F ++ E ++L+ L P+ R T ++ H W+
Sbjct: 253 GDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 184 PNIVNLIEVIDDPNSDH----FYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVS 237
P+IV +++V + N H +++E +EG + G A E A + +RDI +
Sbjct: 82 PHIVCILDVYE--NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT 139
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ +LH HN+ H D+KP+NLL +K+ DF ++ E + L+ TP + A
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVA 197
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYD----KIVNNSLVFPDA- 349
PE LG K+ D W++GV +Y ++ G PF T Q +I FP+
Sbjct: 198 PE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 350 ---MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + + L+ LL DPT RLT+ H W+
Sbjct: 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 184 PNIVNLIEVIDDPNSDH----FYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVS 237
P+IV +++V + N H +++E +EG + G A E A + +RDI +
Sbjct: 63 PHIVCILDVYE--NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT 120
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPS---GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ +LH HN+ H D+KP+NLL +K+ DF ++ E + L+ TP + A
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVA 178
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYD----KIVNNSLVFPDA- 349
PE LG K+ D W++GV +Y ++ G PF T Q +I FP+
Sbjct: 179 PE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 350 ---MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ + + L+ LL DPT RLT+ H W+
Sbjct: 238 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 47/305 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAM-TDVRREVL 176
+ Y V +IG G+YG V R G A+K+ +RV E + REV
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKS--------VRVPNGEEGLPISTVREVA 55
Query: 177 IMKMLQ---HPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L+ HPN+V L++V +D +V E+V+ D PG E++
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI- 114
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ +R + GL +LH + +VH D+KP+N+LV GTVK+ DF +++++ L
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-ALAPVVV 173
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV-------- 340
T + APE L TY D W+VG M + F G + D KI
Sbjct: 174 TLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 341 -----NNSL---VFP-------DAMNPELR----NLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ SL FP ++ PE+ LL +L +P +R++ +H+++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 382 LGDNG 386
D G
Sbjct: 293 HKDEG 297
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 15/265 (5%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 60
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 61 QCDSPYVTKYYGSYLKDTK---LWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 116
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L YLH +H DIK N+L++ G VK+ DF V+ D GTP + APE
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNNSLVFPDAMNPELRNL 357
Y K AD W++G+T + G+ P ++ + NN + L+
Sbjct: 177 KQSAYDSK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 235
Query: 358 LEGLLCKDPTRRLTLNDVAKHTWVL 382
+E L K+P+ R T ++ KH ++L
Sbjct: 236 VEACLNKEPSFRPTAKELLKHKFIL 260
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 15/265 (5%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 60
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 61 QCDSPYVTKYYGSYLKDTK---LWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 116
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L YLH +H DIK N+L++ G VK+ DF V+ D GTP + APE
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 176
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNNSLVFPDAMNPELRNL 357
Y K AD W++G+T + G+ P ++ + NN + L+
Sbjct: 177 KQSAYDSK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 235
Query: 358 LEGLLCKDPTRRLTLNDVAKHTWVL 382
+E L K+P+ R T ++ KH ++L
Sbjct: 236 VEACLNKEPSFRPTAKELLKHKFIL 260
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 137/310 (44%), Gaps = 57/310 (18%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAM-TDVRREVL 176
+ Y V +IG G+YG V R G A+K+ +RV E + REV
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKS--------VRVPNGEEGLPISTVREVA 55
Query: 177 IMKMLQ---HPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L+ HPN+V L++V +D +V E+V+ D PG E++
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI- 114
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ +R + GL +LH + +VH D+KP+N+LV GTVK+ DF +++++ +
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF----- 169
Query: 289 TPV-----FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--- 340
PV + APE L TY D W+VG M + F G + D KI
Sbjct: 170 -PVVVTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 341 ----------NNSL---VFP-------DAMNPELR----NLLEGLLCKDPTRRLTLNDVA 376
+ SL FP ++ PE+ LL +L +P +R++
Sbjct: 228 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
Query: 377 KHTWVLGDNG 386
+H+++ D G
Sbjct: 288 QHSYLHKDEG 297
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 47/305 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAM-TDVRREVL 176
+ Y V +IG G+YG V R G A+K+ +RV E + REV
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKS--------VRVPNGEEGLPISTVREVA 55
Query: 177 IMKMLQ---HPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L+ HPN+V L++V +D +V E+V+ D PG E++
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI- 114
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG 288
+ +R + GL +LH + +VH D+KP+N+LV GTVK+ DF +++++ L
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-ALDPVVV 173
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV-------- 340
T + APE L TY D W+VG M + F G + D KI
Sbjct: 174 TLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 341 -----NNSL---VFP-------DAMNPELR----NLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ SL FP ++ PE+ LL +L +P +R++ +H+++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 382 LGDNG 386
D G
Sbjct: 293 HKDEG 297
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 15/265 (5%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 80
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 81 QCDSPYVTKYYGSYLKDTK---LWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 136
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L YLH +H DIK N+L++ G VK+ DF V+ D GTP + APE
Sbjct: 137 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNNSLVFPDAMNPELRNL 357
Y K AD W++G+T + G+ P ++ + NN + L+
Sbjct: 197 KQSAYDSK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 255
Query: 358 LEGLLCKDPTRRLTLNDVAKHTWVL 382
+E L K+P+ R T ++ KH ++L
Sbjct: 256 VEACLNKEPSFRPTAKELLKHKFIL 280
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ Y+ + K+G G+Y V +S L A+K ++R+ E A REV
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALK--------EIRLEHEEGAPCTAIREVS 52
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H NIV L ++I S +V EY++ I + +L ++
Sbjct: 53 LLKDLKHANIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLL 110
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL Y H V+H D+KP NLL+ G +K+ DF +++ T + P+
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQD 334
LG T D W VG Y M G+ F G T+++
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 49/302 (16%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + K+G G+Y V + G + A+K ++++ E + RE+ +
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALK--------EVKLDSEEGTPSTAIREISL 56
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK----WDNDGFGQ-PGAIGESMARKYL 232
MK L+H NIV L +VI N +V E+++ D+ G P + ++ + +
Sbjct: 57 MKELKHENIVRLYDVIHTENK--LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
++ GL + H + ++H D+KP NLL+ G +K+GDF +++ F + T +
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKI-VNNSLVFP 347
AP+ +G + D W+ G L MI G+ F G E L+ +D + N ++P
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234
Query: 348 -----------------------------DAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
+ ++ L + L GLL +P RL+ H
Sbjct: 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294
Query: 379 TW 380
W
Sbjct: 295 PW 296
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 153 KSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKW 212
K + ++ + +T+M ++ +E+ M HPNIV+ D ++V++ + G
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF--VVKDELWLVMKLLSGGS 99
Query: 213 DND--------GFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
D G + G + ES LR+++ GL YLH + +H D+K N+L+ G+
Sbjct: 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 159
Query: 265 VKIGDFSVSQVFEDDNDVLRRS-----PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYY 319
V+I DF VS D+ R GTP + APE + AD W+ G+T
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
Query: 320 MIIGQYPF--------LGETLQD---TYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTR 368
+ G P+ L TLQ+ + + V + + R ++ L KDP +
Sbjct: 220 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEML-KKYGKSFRKMISLCLQKDPEK 278
Query: 369 RLTLNDVAKHTW 380
R T ++ +H +
Sbjct: 279 RPTAAELLRHKF 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 153 KSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKW 212
K + ++ + +T+M ++ +E+ M HPNIV+ D ++V++ + G
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF--VVKDELWLVMKLLSGGS 94
Query: 213 DND--------GFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
D G + G + ES LR+++ GL YLH + +H D+K N+L+ G+
Sbjct: 95 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 154
Query: 265 VKIGDFSVSQVFEDDNDVLRRS-----PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYY 319
V+I DF VS D+ R GTP + APE + AD W+ G+T
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
Query: 320 MIIGQYPF--------LGETLQD---TYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTR 368
+ G P+ L TLQ+ + + V + + R ++ L KDP +
Sbjct: 215 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEML-KKYGKSFRKMISLCLQKDPEK 273
Query: 369 RLTLNDVAKHTW 380
R T ++ +H +
Sbjct: 274 RPTAAELLRHKF 285
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K RRE
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------PKARRE 58
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 59 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 177
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 178 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 236
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 237 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 287
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K L+ P RRE
Sbjct: 19 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--------LQDCPK------ARRE 64
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 65 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 124
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 125 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 183
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 184 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 242
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 243 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 293
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K RRE
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------PKARRE 58
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 59 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEP 177
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 178 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 236
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 237 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 287
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K RRE
Sbjct: 21 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------PKARRE 66
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 67 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 126
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 185
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 186 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 244
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 245 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 295
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K RRE
Sbjct: 20 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------PKARRE 65
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 66 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 125
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 126 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 184
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 185 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 243
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 244 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 294
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K L+ P RRE
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--------LQDCPK------ARRE 60
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 61 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 179
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 180 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 238
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 239 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K L+ P RRE
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--------LQDCPK------ARRE 104
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 105 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 223
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 224 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 333
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K RRE
Sbjct: 14 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------PKARRE 59
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 60 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 119
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 120 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 178
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 179 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 237
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 238 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 288
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K RRE
Sbjct: 29 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------PKARRE 74
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 75 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 134
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 193
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 194 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 252
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 253 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 303
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K L+ P RRE
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--------LQDCPK------ARRE 60
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 61 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 179
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 180 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 238
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 239 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 289
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K L+ P RRE
Sbjct: 65 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--------LQDCPK------ARRE 110
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 111 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 170
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 171 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 229
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
TP + APE LG K+ D W++GV +Y ++ G PF +I
Sbjct: 230 CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 288
Query: 343 SLVFPD----AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 289 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 339
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 121/286 (42%), Gaps = 51/286 (17%)
Query: 110 DENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT 169
DENG +++ +G G+YG V YA + +++R+A E
Sbjct: 22 DENGDRVV--------LGKGTYGIV-----------YAGRDLS----NQVRIAIKEIPER 58
Query: 170 DVR------REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG---------KWDN 214
D R E+ + K L+H NIV + + +M E V G KW
Sbjct: 59 DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM--EQVPGGSLSALLRSKWG- 115
Query: 215 DGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDFSVS 273
P E Y + I+ GL YLH + +VH DIK DN+L+ SG +KI DF S
Sbjct: 116 -----PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTS 170
Query: 274 QVFEDDNDVLRRSPGTPVFTAPECCLGLTYG-GKAADTWAVGVTLYYMIIGQYPF--LGE 330
+ N GT + APE G GKAAD W++G T+ M G+ PF LGE
Sbjct: 171 KRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 230
Query: 331 TLQDTYD-KIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
+ + P++M+ E + + DP +R ND+
Sbjct: 231 PQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDL 276
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 78/335 (23%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ +Y V+K+G G+YG V G+ A+K + + T RE+
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-------QNSTDAQRTFREI 59
Query: 176 LIMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+I+ L H NIVNL+ V+ N Y+V +Y+E D + + + +
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET--DLHAVIRANILEPVHKQYVVYQ 117
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQV------------------- 275
++ + YLH ++H D+KP N+L+ VK+ DF +S+
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 276 --FEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG---- 329
F+DD +L T + APE LG T K D W++G L ++ G+ F G
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237
Query: 330 ------------------ETLQDTYDKIVNNSL------------------------VFP 347
E++Q + K + SL + P
Sbjct: 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINP 297
Query: 348 DA-MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
A N E +LL+ LL +P +R++ ND KH +V
Sbjct: 298 KADCNEEALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 62
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 63 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 118
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S GT +
Sbjct: 119 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 177
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 237
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 238 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 286
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 109
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 110 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 165
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S GT +
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 284
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 333
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLD-GKHYAIKAFHKSHLSKLRVAPSETAM-TDVRRE 174
+ +Y + KIG G+YG V+Y++ + G+ +A+K K+R+ + + + RE
Sbjct: 1 MEKYHGLEKIGEGTYG--VVYKAQNNYGETFALK--------KIRLEKEDEGIPSTTIRE 50
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ I+K L+H NIV L +VI +V E+++ G + A+ +L
Sbjct: 51 ISILKELKHSNIVKLYDVIH--TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+++G+ Y H V+H D+KP NLL+ G +KI DF +++ F T + A
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFPDA 349
P+ +G D W+VG M+ G F G + D +I NS +P+
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 350 M-----NPELR-------------------NLLEGLLCKDPTRRLTLNDVAKHTWVLGDN 385
+P +LL +L DP +R+T +H + +N
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLD-GKHYAIKAFHKSHLSKLRVAPSETAM-TDVRRE 174
+ +Y + KIG G+YG V+Y++ + G+ +A+K K+R+ + + + RE
Sbjct: 1 MEKYHGLEKIGEGTYG--VVYKAQNNYGETFALK--------KIRLEKEDEGIPSTTIRE 50
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ I+K L+H NIV L +VI +V E+++ G + A+ +L
Sbjct: 51 ISILKELKHSNIVKLYDVIH--TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+++G+ Y H V+H D+KP NLL+ G +KI DF +++ F T + A
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFPDA 349
P+ +G D W+VG M+ G F G + D +I NS +P+
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 350 M-----NPELR-------------------NLLEGLLCKDPTRRLTLNDVAKHTWVLGDN 385
+P +LL +L DP +R+T +H + +N
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 109
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 110 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 165
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S GT +
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 284
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 333
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 121/286 (42%), Gaps = 51/286 (17%)
Query: 110 DENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT 169
DENG +++ +G G+YG V YA + +++R+A E
Sbjct: 8 DENGDRVV--------LGKGTYGIV-----------YAGRDLS----NQVRIAIKEIPER 44
Query: 170 DVR------REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG---------KWDN 214
D R E+ + K L+H NIV + + +M E V G KW
Sbjct: 45 DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM--EQVPGGSLSALLRSKWG- 101
Query: 215 DGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLV-APSGTVKIGDFSVS 273
P E Y + I+ GL YLH + +VH DIK DN+L+ SG +KI DF S
Sbjct: 102 -----PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTS 156
Query: 274 QVFEDDNDVLRRSPGTPVFTAPECCLGLTYG-GKAADTWAVGVTLYYMIIGQYPF--LGE 330
+ N GT + APE G GKAAD W++G T+ M G+ PF LGE
Sbjct: 157 KRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 216
Query: 331 TLQDTYD-KIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
+ + P++M+ E + + DP +R ND+
Sbjct: 217 PQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDL 262
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLD-GKHYAIKAFHKSHLSKLRVAPSETAM-TDVRRE 174
+ +Y + KIG G+YG V+Y++ + G+ +A+K K+R+ + + + RE
Sbjct: 1 MEKYHGLEKIGEGTYG--VVYKAQNNYGETFALK--------KIRLEKEDEGIPSTTIRE 50
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ I+K L+H NIV L +VI +V E+++ G + A+ +L
Sbjct: 51 ISILKELKHSNIVKLYDVIH--TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+++G+ Y H V+H D+KP NLL+ G +KI DF +++ F T + A
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-----NSLVFPDA 349
P+ +G D W+VG M+ G F G + D +I NS +P+
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 350 M-----NPELR-------------------NLLEGLLCKDPTRRLTLNDVAKHTWVLGDN 385
+P +LL +L DP +R+T +H + +N
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G VV ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK++ H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VGV + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 81
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 82 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 137
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S GT +
Sbjct: 138 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 196
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 256
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 66 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 121
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S GT +
Sbjct: 122 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 180
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 240
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 241 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 289
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 61
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 62 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 117
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S GT +
Sbjct: 118 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 176
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 236
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 237 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 285
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 29/255 (11%)
Query: 144 KHYAIK--------AFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ-HPNIVNLIEVID 194
K YA+K +F + +LR A +EV I++ + HPNI+ L + +
Sbjct: 30 KEYAVKIIDVTGGGSFSAEEVQELREA--------TLKEVDILRKVSGHPNIIQLKDTYE 81
Query: 195 DPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKP 254
+ F++V + ++ D + + E RK +R ++ + LH N+VH D+KP
Sbjct: 82 --TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKP 139
Query: 255 DNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP---ECCLGLTYG--GKAAD 309
+N+L+ +K+ DF S D + LR GTP + AP EC + + GK D
Sbjct: 140 ENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVD 198
Query: 310 TWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKD 365
W+ GV +Y ++ G PF I++ + F D + +++L+ L
Sbjct: 199 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 258
Query: 366 PTRRLTLNDVAKHTW 380
P +R T + H +
Sbjct: 259 PQKRYTAEEALAHPF 273
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 16/274 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G +V L R D + A+K + +A + RRE L HP
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 186 IVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV + + + P Y+V+EYV+G D G + A + + D L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP---GTPVFTAPECCLG 300
+ ++H D+KP N+L++ + VK+ DF +++ D + + ++ GT + +PE G
Sbjct: 134 QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
Query: 301 LTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNPELRN 356
+ + +D +++G LY ++ G+ PF G++ + V + P A ++ +L
Sbjct: 194 DSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 252
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
++ L K+P R + V NG P+
Sbjct: 253 VVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 16/274 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G +V L R D + A+K + +A + RRE L HP
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 186 IVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV + + + P Y+V+EYV+G D G + A + + D L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP---GTPVFTAPECCLG 300
+ ++H D+KP N++++ + VK+ DF +++ D + + ++ GT + +PE G
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 301 LTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNPELRN 356
+ + +D +++G LY ++ G+ PF G++ + V + P A ++ +L
Sbjct: 194 DSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDA 252
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
++ L K+P R + V NG P+
Sbjct: 253 VVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 29/255 (11%)
Query: 144 KHYAIK--------AFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ-HPNIVNLIEVID 194
K YA+K +F + +LR A +EV I++ + HPNI+ L + +
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREA--------TLKEVDILRKVSGHPNIIQLKDTYE 94
Query: 195 DPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKP 254
+ F++V + ++ D + + E RK +R ++ + LH N+VH D+KP
Sbjct: 95 --TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKP 152
Query: 255 DNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP---ECCLGLTYG--GKAAD 309
+N+L+ +K+ DF S D + LR GTP + AP EC + + GK D
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 310 TWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKD 365
W+ GV +Y ++ G PF I++ + F D + +++L+ L
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 271
Query: 366 PTRRLTLNDVAKHTW 380
P +R T + H +
Sbjct: 272 PQKRYTAEEALAHPF 286
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 81
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 82 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 137
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S GT +
Sbjct: 138 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMP 196
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 256
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 29/255 (11%)
Query: 144 KHYAIK--------AFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ-HPNIVNLIEVID 194
K YA+K +F + +LR A +EV I++ + HPNI+ L + +
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREA--------TLKEVDILRKVSGHPNIIQLKDTYE 94
Query: 195 DPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKP 254
+ F++V + ++ D + + E RK +R ++ + LH N+VH D+KP
Sbjct: 95 --TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKP 152
Query: 255 DNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP---ECCLGLTYG--GKAAD 309
+N+L+ +K+ DF S D + LR GTP + AP EC + + GK D
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQL-DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 310 TWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKD 365
W+ GV +Y ++ G PF I++ + F D + +++L+ L
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 271
Query: 366 PTRRLTLNDVAKHTW 380
P +R T + H +
Sbjct: 272 PQKRYTAEEALAHPF 286
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 104/233 (44%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R IGAG +G+V R L GK A + L+V +E D E IM H
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 82
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI++L V+ S +V EY+E G D G LR I +G+ YL
Sbjct: 83 PNIIHLEGVVT--KSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +TAPE +
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE-AI 199
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
A+D W+ G+ ++ ++ G+ P+ T QD K V P M+
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-KAVEEGYRLPSPMD 251
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETA--MTDVRREV 175
+ + ++G GSYG+V RS DG+ YA+K +S R P + A + +V
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK----RSMSPFR-GPKDRARKLAEVGSH- 110
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
K+ QHP V L + ++ Y+ E ++ E+ YLRD
Sbjct: 111 --EKVGQHPCCVRLEQAWEE--GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDT 166
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ L +LH +VH D+KP N+ + P G K+GDF + V G P + AP
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYMAP 225
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIG-QYPFLGETLQDTYDKIVNNSLVFPDAMNPEL 354
E G +Y G AAD +++G+T+ + + P GE Q + F ++ EL
Sbjct: 226 ELLQG-SY-GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPE--FTAGLSSEL 281
Query: 355 RNLLEGLLCKDPTRRLT 371
R++L +L DP R T
Sbjct: 282 RSVLVMMLEPDPKLRAT 298
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 26/305 (8%)
Query: 89 LNGLICRQFPVKESNKLIRSEDENGTKMINEYVHV-RKIGAGSYGKVVLYRSSLDGKHYA 147
L + R P ++ KL ++++ TK E V K+G GSYG V
Sbjct: 2 LETVQLRNPPRRQLKKL---DEDSLTKQPEEVFDVLEKLGEGSYGSVY------------ 46
Query: 148 IKAFHKS--HLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVL 205
KA HK + ++ P E+ + ++ +E+ IM+ P++V N+D ++V+
Sbjct: 47 -KAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTD-LWIVM 103
Query: 206 EYVEGKWDNDGFG-QPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
EY +D + + E L+ + GL YLH +H DIK N+L+ G
Sbjct: 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH 163
Query: 265 VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQ 324
K+ DF V+ D GTP + APE + Y AD W++G+T M G+
Sbjct: 164 AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC-VADIWSLGITAIEMAEGK 222
Query: 325 YPFLG-ETLQDTYDKIVNNSLVF--PDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
P+ ++ + N F P+ + + ++ L K P +R T + +H +V
Sbjct: 223 PPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
Query: 382 LGDNG 386
G
Sbjct: 283 RSAKG 287
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 17/261 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ--- 182
+G G +G V D AIK ++ + L +P ++T L+ K+
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRV--LGWSPLSDSVTCPLEVALLWKVGAGGG 96
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIVSGLMY 241
HP ++ L++ + + F +VLE D D + G +GE +R + +V+ + +
Sbjct: 97 HPGVIRLLDWFE--TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 242 LHGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLG 300
H VVH DIK +N+L+ G K+ DF + D+ GT V++ PE
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFDGTRVYSPPEWISR 212
Query: 301 LTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNLLEG 360
Y A W++G+ LY M+ G PF + +I+ L FP ++P+ L+
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAELHFPAHVSPDCCALIRR 266
Query: 361 LLCKDPTRRLTLNDVAKHTWV 381
L P+ R +L ++ W+
Sbjct: 267 CLAPKPSSRPSLEEILLDPWM 287
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 16/274 (5%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G +V L R D + A+K + +A + RRE L HP
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 186 IVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV + + + P Y+V+EYV+G D G + A + + D L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 244 GHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP---GTPVFTAPECCLG 300
+ ++H D+KP N++++ + VK+ DF +++ D + + ++ GT + +PE G
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 301 LTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDA----MNPELRN 356
+ + +D +++G LY ++ G+ PF G++ + V + P A ++ +L
Sbjct: 194 DSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 252
Query: 357 LLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
++ L K+P R + V NG P+
Sbjct: 253 VVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 315
Query: 380 WV 381
++
Sbjct: 316 YL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 80 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 137
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 258 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 316
Query: 380 WV 381
++
Sbjct: 317 YL 318
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 31/289 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM- 178
Y +++IG+G KV + + YAIK + L A ++T + R E+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN------LEEADNQT-LDSYRNEIAYLN 109
Query: 179 KMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWD-NDGFGQPGAIGESMARKYLRDIV 236
K+ QH + +I + D +D + YMV+E G D N + +I + Y ++++
Sbjct: 110 KLQQHSD--KIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNML 165
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSP-GTPVFTA 294
+ +H H +VH D+KP N L+ G +K+ DF ++ Q+ D V++ S G +
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMP 224
Query: 295 PECCLGLTYGGK----------AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV---N 341
PE ++ + +D W++G LYYM G+ PF Q + + N
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 284
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
+ + FPD +L+++L+ L +DP +R+++ ++ H +V P+ Q
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 333
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK++ H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VGV + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 134/322 (41%), Gaps = 57/322 (17%)
Query: 102 SNKLIRS-----EDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKS 154
S LIR +D N T ++ YV +G+G+YG V G+ AIK
Sbjct: 19 SMSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-- 76
Query: 155 HLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDH----FYMVLEYVEG 210
R SE RE+L++K +QH N++ L++V +S FY+V+ +++
Sbjct: 77 -----RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT 131
Query: 211 KWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDF 270
G E + + ++ GL Y+H VVH D+KP NL V +KI DF
Sbjct: 132 DLQKI-MGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 188
Query: 271 SVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG- 329
+++ + + + T + APE L + + D W+VG + M+ G+ F G
Sbjct: 189 GLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245
Query: 330 ------------------ETLQDTYDKIVNNSL-------------VFPDAMNPELRNLL 358
E +Q DK + + +FP A +P+ +LL
Sbjct: 246 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA-SPQAADLL 304
Query: 359 EGLLCKDPTRRLTLNDVAKHTW 380
E +L D +RLT H +
Sbjct: 305 EKMLELDVDKRLTAAQALTHPF 326
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYXQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 315
Query: 380 WV 381
++
Sbjct: 316 YL 317
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 80 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 137
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 80
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 81 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 138
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 71
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 72 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 129
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 73 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 130
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 73 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 130
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 250 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKCQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 315
Query: 380 WV 381
++
Sbjct: 316 YL 317
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 250 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 253 NXIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 311
Query: 380 WV 381
++
Sbjct: 312 YL 313
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 172 RREVLIMKMLQHPNIVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
RRE L HP IV + + + P Y+V+EYV+G D G + A
Sbjct: 60 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP-- 287
+ + D L + H + ++H D+KP N++++ + VK+ DF +++ D + + ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 288 -GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF 346
GT + +PE G + + +D +++G LY ++ G+ PF G++ + V +
Sbjct: 180 IGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 347 PDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
P A ++ +L ++ L K+P R + V NG P+
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 54/309 (17%)
Query: 109 EDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSET 166
+D N T ++ YV +G+G+YG V G+ AIK R SE
Sbjct: 13 QDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEI 65
Query: 167 AMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDH----FYMVLEYVEGKWDND-GFGQPG 221
RE+L++K +QH N++ L++V +S FY+V+ +++ G
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---- 121
Query: 222 AIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND 281
E + + ++ GL Y+H VVH D+KP NL V +KI DF +++ + +
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 179
Query: 282 VLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG------------ 329
+ T + APE L + + D W+VG + M+ G+ F G
Sbjct: 180 -MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
Query: 330 -------ETLQDTYDKIVNNSL-------------VFPDAMNPELRNLLEGLLCKDPTRR 369
E +Q DK + + +FP A +P+ +LLE +L D +R
Sbjct: 239 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA-SPQAADLLEKMLELDVDKR 297
Query: 370 LTLNDVAKH 378
LT H
Sbjct: 298 LTAAQALTH 306
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 34/292 (11%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K L+ P RRE
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKX--------LQDCPK------ARRE 104
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V E ++G G A E A
Sbjct: 105 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ + I + YLH N+ H D+KP+NLL P+ +K+ DF ++ N L
Sbjct: 165 EIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTP 223
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGE----TLQDTYDKIVNN 342
TP + APE LG K+ D W++GV Y ++ G PF +I
Sbjct: 224 CYTPYYVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXG 282
Query: 343 SLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R T+ + H W+ + +PQ
Sbjct: 283 QYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI-XQSTKVPQ 333
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 253 NXIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 311
Query: 380 WV 381
++
Sbjct: 312 YL 313
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 127/284 (44%), Gaps = 46/284 (16%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + +G G++G+VV R++LD ++YAIK ++ +E ++ + EV++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIK----------KIRHTEEKLSTILSEVML 55
Query: 178 MKMLQHPNIV----------NLIEVIDD-PNSDHFYMVLEYVEGKWDNDGFGQPGAIGES 226
+ L H +V N ++ + ++ +EY E + D +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 227 MAR-KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV------------- 272
+ R I+ L Y+H ++H D+KP N+ + S VKIGDF +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 273 -SQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF-LGE 330
SQ +D L + GT ++ A E G + + D +++G+ + MI YPF G
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM 232
Query: 331 TLQDTYDKIVNNSLVFP-----DAMNPELRNLLEGLLCKDPTRR 369
+ K+ + S+ FP + M E + ++ L+ DP +R
Sbjct: 233 ERVNILKKLRSVSIEFPPDFDDNKMKVE-KKIIRLLIDHDPNKR 275
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 250 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 112
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 169
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 228
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 229 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 347
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 348 ISVDDALQHPYI 359
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 77 LLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 134
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 250 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 67
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSY-L 124
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRY 183
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 184 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 303 ISVDDALQHPYI 314
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ ++G G++GKV Y++ K ++ A K +K SE + D E+ I+
Sbjct: 42 IGELGDGAFGKV--YKAQ--NKETSVLAAAKVIDTK-----SEEELEDYMVEIDILASCD 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG-KWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPNIV L++ N + ++++E+ G D + ES + + + L Y
Sbjct: 93 HPNIVKLLDAFYYEN--NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCL 299
LH + ++H D+K N+L G +K+ DF VS ++ + RR GTP + APE +
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVM 208
Query: 300 GLTYGGK----AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNP 352
T + AD W++G+TL M + P KI + +L P +
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGD-NGPIPQYLCWCKRD 398
++ L+ L K+ R T + + +H +V D N PI + + K +
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAE 315
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 18/260 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
N + R +G G +G+V + GK YA K K + E I
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK------KRKGEAMALNEKQI 237
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG---KWDNDGFGQPGAIGESMARKYLRD 234
++ + +V+L + D +VL + G K+ GQ G E+ A Y +
Sbjct: 238 LEKVNSRFVVSLAYAYE--TKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFYAAE 294
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
I GL LH +V+ D+KP+N+L+ G ++I D ++ V + ++ GT + A
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMA 353
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL---GETLQDTYDKIVNN-SLVFPDAM 350
PE Y + D WA+G LY MI GQ PF + ++ +++V + +
Sbjct: 354 PEVVKNERYTF-SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 351 NPELRNLLEGLLCKDPTRRL 370
+P+ R+L LLCKDP RL
Sbjct: 413 SPQARSLCSQLLCKDPAERL 432
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 17/292 (5%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 60
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 61 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 118
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D ++ GT + +PE
Sbjct: 119 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--EMANEFVGTRSYMSPE 176
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV-FPDAM-NPEL 354
G Y + +D W++G++L M +G+YP + + D IVN P A+ + E
Sbjct: 177 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEF 235
Query: 355 RNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYLCW-CKRDRLRRDNT 405
++ + L K+P R L + H ++ + + W C L + +T
Sbjct: 236 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPST 287
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ ++G G++GKV Y++ K ++ A K +K SE + D E+ I+
Sbjct: 42 IGELGDGAFGKV--YKAQ--NKETSVLAAAKVIDTK-----SEEELEDYMVEIDILASCD 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG-KWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPNIV L++ N + ++++E+ G D + ES + + + L Y
Sbjct: 93 HPNIVKLLDAFYYEN--NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCL 299
LH + ++H D+K N+L G +K+ DF VS ++ + RR GTP + APE +
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVM 208
Query: 300 GLTYGGK----AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNP 352
T + AD W++G+TL M + P KI + +L P +
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGD-NGPIPQYLCWCKRD 398
++ L+ L K+ R T + + +H +V D N PI + + K +
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAE 315
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AI+ +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIR----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 172 RREVLIMKMLQHPNIVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
RRE L HP IV + + P Y+V+EYV+G D G + A
Sbjct: 60 RREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP-- 287
+ + D L + H + ++H D+KP N++++ + VK+ DF +++ D + + ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 288 -GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF 346
GT + +PE G + + +D +++G LY ++ G+ PF G++ + V +
Sbjct: 180 IGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 347 PDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
P A ++ +L ++ L K+P R + V NG P+
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 18/260 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
N + R +G G +G+V + GK YA K K + E I
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK------KRKGEAMALNEKQI 237
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG---KWDNDGFGQPGAIGESMARKYLRD 234
++ + +V+L + D +VL + G K+ GQ G E+ A Y +
Sbjct: 238 LEKVNSRFVVSLAYAYE--TKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFYAAE 294
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
I GL LH +V+ D+KP+N+L+ G ++I D ++ V + ++ GT + A
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMA 353
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL---GETLQDTYDKIVNN-SLVFPDAM 350
PE Y + D WA+G LY MI GQ PF + ++ +++V + +
Sbjct: 354 PEVVKNERYTF-SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 351 NPELRNLLEGLLCKDPTRRL 370
+P+ R+L LLCKDP RL
Sbjct: 413 SPQARSLCSQLLCKDPAERL 432
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 77 LLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 134
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 255 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 313
Query: 380 WV 381
++
Sbjct: 314 YL 315
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 77 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 134
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 255 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 313
Query: 380 WV 381
++
Sbjct: 314 YL 315
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 132
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 191
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 192 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 250
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 251 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 310
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 311 ISVDDALQHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 250 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 112
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 169
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 228
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 229 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 347
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 348 ISVDDALQHPYI 359
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ ++G G++GKV Y++ K ++ A K +K SE + D E+ I+
Sbjct: 42 IGELGDGAFGKV--YKAQ--NKETSVLAAAKVIDTK-----SEEELEDYMVEIDILASCD 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG-KWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPNIV L++ N + ++++E+ G D + ES + + + L Y
Sbjct: 93 HPNIVKLLDAFYYEN--NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCL 299
LH + ++H D+K N+L G +K+ DF VS ++ + RR GTP + APE +
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVM 208
Query: 300 GLTYGGK----AADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNP 352
T + AD W++G+TL M + P KI + +L P +
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGD-NGPIPQYLCWCKRD 398
++ L+ L K+ R T + + +H +V D N PI + + K +
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAE 315
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK++ H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 73
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 74 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 130
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 131 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 189
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 190 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 248
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 249 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 308
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 309 ISVDDALQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 250 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 197 NSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDN 256
S ++++EY+ G D +PG + E+ LR+I+ GL YLH +H DIK N
Sbjct: 88 KSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAAN 146
Query: 257 LLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVT 316
+L++ G VK+ DF V+ D GTP + APE Y K AD W++G+T
Sbjct: 147 VLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK-ADIWSLGIT 205
Query: 317 LYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPE-LRNLLEGLLCKDPTRRLTLNDV 375
+ G+ P I NS + + + + +E L KDP R T ++
Sbjct: 206 AIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
Query: 376 AKHTWV 381
KH ++
Sbjct: 266 LKHKFI 271
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 132
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 191
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 192 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 250
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 251 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 310
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 311 ISVDDALQHPYI 322
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 82
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 83 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 140
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 260
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 261 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 319
Query: 380 WV 381
++
Sbjct: 320 YL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 337 DKIVN----NSL-------------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N N L +FP+A + L +LL+ +L +P +R+ + H
Sbjct: 253 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHP 311
Query: 380 WV 381
++
Sbjct: 312 YL 313
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G +GKV L R +G + + KS L+ + D+++E+ I++ L
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKS----LKPESGGNHIADLKKEIEILRNLY 69
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
H NIV + + + +++E++ G I KY I G+ Y
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND--VLRRSPGTPVF-TAPECC 298
L VH D+ N+LV VKIGDF +++ E D + ++ +PVF APEC
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 299 LGLTYGGKAADTWAVGVTLYYMI 321
+ + A+D W+ GVTL+ ++
Sbjct: 190 MQSKF-YIASDVWSFGVTLHELL 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G +GKV L R +G + + KS L+ + D+++E+ I++ L
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKS----LKPESGGNHIADLKKEIEILRNLY 81
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
H NIV + + + +++E++ G I KY I G+ Y
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND--VLRRSPGTPVF-TAPECC 298
L VH D+ N+LV VKIGDF +++ E D + ++ +PVF APEC
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 299 LGLTYGGKAADTWAVGVTLYYMI 321
+ + A+D W+ GVTL+ ++
Sbjct: 202 MQSKF-YIASDVWSFGVTLHELL 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 67
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 124
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 183
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 184 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 303 ISVDDALQHPYI 314
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 134/308 (43%), Gaps = 49/308 (15%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V S++DG+ A A K + R SE RE+ ++K
Sbjct: 27 YRDLQPVGSGAYGAVC---SAVDGRTGAKVAIKKLY----RPFQSELFAKRAYRELRLLK 79
Query: 180 MLQHPNIVNLIEVI--DDPNSDH--FYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V D+ D FY+V+ ++ D + +GE + + +
Sbjct: 80 HMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT--DLGKLMKHEKLGEDRIQFLVYQM 137
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H ++H D+KP NL V +KI DF +++ + + + T + AP
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MXGXVVTRWYRAP 194
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFP-------- 347
E L + D W+VG + MI G+ F G D +I+ + P
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254
Query: 348 --DAMN-----PELR----------------NLLEGLLCKDPTRRLTLNDVAKHTWV--L 382
+A N PEL NLLE +L D +R+T + H + L
Sbjct: 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314
Query: 383 GDNGPIPQ 390
D PQ
Sbjct: 315 HDTEDEPQ 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 125
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 184
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 185 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 243
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 244 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 303
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 304 ISVDDALQHPYI 315
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK++ H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 38/289 (13%)
Query: 125 KIGAGSYGKVVLYRS-----SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++G G++GKV L D A+KA ++ SE+A D +RE ++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---------SESARQDFQREAELLT 75
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ----------------PGAI 223
MLQH +IV V + MV EY+ D + F + PG +
Sbjct: 76 MLQHQHIVRFFGVCTEGRP--LLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 224 GESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDV 282
G + +G++YL G + VH D+ N LV VKIGDF +S+ ++ D
Sbjct: 133 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192
Query: 283 LRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIV 340
+ P+ + PE L + + +D W+ GV L+ + G+ P+ + + D I
Sbjct: 193 VGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 251
Query: 341 NN-SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPI 388
L P A PE+ ++ G ++P +R ++ DV L P+
Sbjct: 252 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 300
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI++L+ V + Y+V+E ++ Q E M+
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSY-L 125
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 184
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 185 YRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 243
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD++ P + R+LL +L DP +R
Sbjct: 244 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 303
Query: 370 LTLNDVAKHTWV 381
++++D +H ++
Sbjct: 304 ISVDDALQHPYI 315
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 105/233 (45%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R IGAG +G+V R L GK A + L+V +E D E IM H
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVA-----IKTLKVGYTEKQRRDFLCEASIMGQFDH 103
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PN+V+L V+ +V+E++E G D G LR I +G+ YL
Sbjct: 104 PNVVHLEGVVT--RGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG--TPV-FTAPECCL 299
VH D+ N+LV + K+ DF +S+V EDD + + + G PV +TAPE
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ ++ M G+ P+ + QD K + P M+
Sbjct: 222 YRKF-TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLPAPMD 272
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 94
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 95 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 152
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 38/289 (13%)
Query: 125 KIGAGSYGKVVLYRS-----SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++G G++GKV L D A+KA ++ SE+A D +RE ++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---------SESARQDFQREAELLT 69
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ----------------PGAI 223
MLQH +IV V + MV EY+ D + F + PG +
Sbjct: 70 MLQHQHIVRFFGVCTEGRP--LLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGPL 126
Query: 224 GESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDV 282
G + +G++YL G + VH D+ N LV VKIGDF +S+ ++ D
Sbjct: 127 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186
Query: 283 LRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIV 340
+ P+ + PE L + + +D W+ GV L+ + G+ P+ + + D I
Sbjct: 187 VGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 245
Query: 341 NN-SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPI 388
L P A PE+ ++ G ++P +R ++ DV L P+
Sbjct: 246 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 294
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 172 RREVLIMKMLQHPNIVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
RRE L HP IV + + + P Y+V+EYV+G D G + A
Sbjct: 77 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 136
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP-- 287
+ + D L + H + ++H D+KP N++++ + VK+ DF +++ D + + ++
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 196
Query: 288 -GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF 346
GT + +PE G + + +D +++G LY ++ G+ PF G++ + V +
Sbjct: 197 IGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 255
Query: 347 PDA----MNPELRNLLEGLLCKDPTRR 369
P A ++ +L ++ L K+P R
Sbjct: 256 PSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 38/289 (13%)
Query: 125 KIGAGSYGKVVLYR-----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++G G++GKV L D A+KA ++ SE+A D +RE ++
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---------SESARQDFQREAELLT 98
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ----------------PGAI 223
MLQH +IV V + MV EY+ D + F + PG +
Sbjct: 99 MLQHQHIVRFFGVCTEGRP--LLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGPL 155
Query: 224 GESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDV 282
G + +G++YL G + VH D+ N LV VKIGDF +S+ ++ D
Sbjct: 156 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215
Query: 283 LRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIV 340
+ P+ + PE L + + +D W+ GV L+ + G+ P+ + + D I
Sbjct: 216 VGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274
Query: 341 NN-SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPI 388
L P A PE+ ++ G ++P +R ++ DV L P+
Sbjct: 275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 66/316 (20%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQV----FEDDNDVLRRSP 287
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ F + +V+ R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR-- 189
Query: 288 GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN----- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 190 ---YYRAPEVILGMGY-KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 343 --------------------------SLVFPDAMNP-----------ELRNLLEGLLCKD 365
+FPD + P + R+LL +L D
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 366 PTRRLTLNDVAKHTWV 381
++R+++++ +H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 66/316 (20%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQV----FEDDNDVLRRSP 287
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ F + +V+ R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR-- 189
Query: 288 GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN----- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 190 ---YYRAPEVILGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 343 --------------------------SLVFPDAMNP-----------ELRNLLEGLLCKD 365
+FPD + P + R+LL +L D
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 366 PTRRLTLNDVAKHTWV 381
++R+++++ +H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 46/284 (16%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + +G G++G+VV R++LD ++YAIK ++ +E ++ + EV++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIK----------KIRHTEEKLSTILSEVML 55
Query: 178 MKMLQHPNIV----------NLIEVIDD-PNSDHFYMVLEYVEGKWDNDGFGQPGAIGES 226
+ L H +V N ++ + ++ +EY E D +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 227 MAR-KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV------------- 272
+ R I+ L Y+H ++H D+KP N+ + S VKIGDF +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 273 -SQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF-LGE 330
SQ +D L + GT ++ A E G + + D +++G+ + MI YPF G
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM 232
Query: 331 TLQDTYDKIVNNSLVFP-----DAMNPELRNLLEGLLCKDPTRR 369
+ K+ + S+ FP + M E + ++ L+ DP +R
Sbjct: 233 ERVNILKKLRSVSIEFPPDFDDNKMKVE-KKIIRLLIDHDPNKR 275
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 21/270 (7%)
Query: 100 KESNKLIRSEDENGT-KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSK 158
K N+ E + T ++ Y ++ IG+G+ G V ++ G + A+K
Sbjct: 5 KVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS------ 58
Query: 159 LRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDN 214
R ++T RE++++K + H NI++L+ V + Y+V+E ++ N
Sbjct: 59 -RPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA---N 114
Query: 215 DGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ 274
+ L ++ G+ +LH ++H D+KP N++V T+KI DF +++
Sbjct: 115 LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 275 VFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQD 334
N ++ T + APE LG+ Y D W+VG + ++ G F G D
Sbjct: 175 T-ACTNFMMTPYVVTRYYRAPEVILGMGYAAN-VDIWSVGCIMGELVKGCVIFQGTDHID 232
Query: 335 TYDKIVNN----SLVFPDAMNPELRNLLEG 360
++K++ S F A+ P +RN +E
Sbjct: 233 QWNKVIEQLGTPSAEFMAALQPTVRNYVEN 262
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 66/316 (20%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQV----FEDDNDVLRRSP 287
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ F +V+ R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR-- 189
Query: 288 GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN----- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 190 ---YYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 343 --------------------------SLVFPDAMNP-----------ELRNLLEGLLCKD 365
+FPD + P + R+LL +L D
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 366 PTRRLTLNDVAKHTWV 381
++R+++++ +H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA + +LR + +RE+ I+
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR--------SGWQREIEIL 64
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +IV +D +V+EYV D + +G + + + I G
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLFAQQICEG 123
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TAP 295
+ YLH + +H + N+L+ VKIGDF +++ + ++ R R G +PVF AP
Sbjct: 124 MAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 183
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMI 321
EC + A+D W+ GVTLY ++
Sbjct: 184 ECLKECKF-YYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA + +LR + +RE+ I+
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR--------SGWQREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +IV +D +V+EYV D + +G + + + I G
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLFAQQICEG 124
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TAP 295
+ YLH + +H + N+L+ VKIGDF +++ + ++ R R G +PVF AP
Sbjct: 125 MAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 184
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMI 321
EC + A+D W+ GVTLY ++
Sbjct: 185 ECLKECKF-YYASDVWSFGVTLYELL 209
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 53/315 (16%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 69
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 127
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE-DDNDVLRRSP 287
++ ++ +++GL Y+H + ++H D+K N+L+ G +K+ DF +++ F N R
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 288 GTPV---FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--- 341
V + PE LG G D W G + M G T Q I
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
Query: 342 --NSLVFPDAMNPELR---------------------------NLLEGLLCKDPTRRLTL 372
V+P+ N EL +L++ LL DP +R+
Sbjct: 248 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS 307
Query: 373 NDVAKHTWVLGDNGP 387
+D H + D P
Sbjct: 308 DDALNHDFFWSDPMP 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 20/252 (7%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y ++ IG+G+ G V ++ G + A+K R ++T RE+
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-------RPFQNQTHAKRAYREL 72
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
+++K + H NI++L+ V + Y+V+E ++ + +
Sbjct: 73 VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYL 129
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ N ++ T
Sbjct: 130 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ASTNFMMTPYVVTRY 188
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN----SLVFP 347
+ APE LG+ Y + D W+VG + ++ G F G D ++K++ S F
Sbjct: 189 YRAPEVILGMGY-KENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 247
Query: 348 DAMNPELRNLLE 359
A+ P +RN +E
Sbjct: 248 AALQPTVRNYVE 259
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 16/237 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+ Y + K+G G+YG+V ++ + AIK H E REV
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-------EEEGVPGTAIREVS 85
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K LQH NI+ L VI ++ +++ EY E P + + + +L ++
Sbjct: 86 LLKELQHRNIIELKSVIH--HNHRLHLIFEYAENDLKKYMDKNPD-VSMRVIKSFLYQLI 142
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSG-----TVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
+G+ + H +H D+KP NLL++ S +KIGDF +++ F T
Sbjct: 143 NGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW 202
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ PE LG + + D W++ M++ F G++ D KI L PD
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF-EVLGLPD 258
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 51/295 (17%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ-HP 184
+G G++ +V + + + YA+K K P + V REV ++ Q H
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQ--------PGHI-RSRVFREVEMLYQCQGHR 71
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ LIE + D FY+V E + G + E A ++D+ S L +LH
Sbjct: 72 NVLELIEFFE--EEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 245 HNVVHGDIKPDNLL------VAPSGTVKIGDFSVSQVFEDDNDV-------LRRSPGTPV 291
+ H D+KP+N+L V+P VKI DF + + + D L G+
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSP---VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 292 FTAPECCLGLTYGG----KAADTWAVGVTLYYMIIGQYPFLGETLQDT------------ 335
+ APE + K D W++GV LY ++ G PF+G D
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 336 ---YDKIVNNSLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
++ I FPD ++ ++L+ LL +D +RL+ V +H WV G
Sbjct: 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 20/229 (8%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 94
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + D + + +L
Sbjct: 95 LLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA--DLYKLLKTQHLSNDHICYFLYQ 152
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF +++V + D+D L T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ APE L K+ D W+VG L M+ + F G+ D + I+
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 51/295 (17%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ-HP 184
+G G++ +V + + + YA+K K P + V REV ++ Q H
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQ--------PGHI-RSRVFREVEMLYQCQGHR 71
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ LIE + D FY+V E + G + E A ++D+ S L +LH
Sbjct: 72 NVLELIEFFE--EEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 245 HNVVHGDIKPDNLL------VAPSGTVKIGDFSVSQVFEDDNDV-------LRRSPGTPV 291
+ H D+KP+N+L V+P VKI DF + + + D L G+
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSP---VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 292 FTAPECCLGLTYGG----KAADTWAVGVTLYYMIIGQYPFLGETLQDT------------ 335
+ APE + K D W++GV LY ++ G PF+G D
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 336 ---YDKIVNNSLVFPDA----MNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
++ I FPD ++ ++L+ LL +D +RL+ V +H WV G
Sbjct: 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 76 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 132
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 191
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 192 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 250
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 310
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 311 ISVDEALQHPYI 322
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 53/315 (16%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 69
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 127
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE-DDNDVLRRSP 287
++ ++ +++GL Y+H + ++H D+K N+L+ G +K+ DF +++ F N R
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 288 GTPV---FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--- 341
V + PE LG G D W G + M G T Q I
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
Query: 342 --NSLVFPDAMNPELR---------------------------NLLEGLLCKDPTRRLTL 372
V+P+ N EL +L++ LL DP +R+
Sbjct: 248 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS 307
Query: 373 NDVAKHTWVLGDNGP 387
+D H + D P
Sbjct: 308 DDALNHDFFWSDPMP 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 53/315 (16%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 68
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 126
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE-DDNDVLRRSP 287
++ ++ +++GL Y+H + ++H D+K N+L+ G +K+ DF +++ F N R
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 288 GTPV---FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--- 341
V + PE LG G D W G + M G T Q I
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 246
Query: 342 --NSLVFPDAMNPELR---------------------------NLLEGLLCKDPTRRLTL 372
V+P+ N EL +L++ LL DP +R+
Sbjct: 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS 306
Query: 373 NDVAKHTWVLGDNGP 387
+D H + D P
Sbjct: 307 DDALNHDFFWSDPMP 321
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 53/315 (16%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 69
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 127
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE-DDNDVLRRSP 287
++ ++ +++GL Y+H + ++H D+K N+L+ G +K+ DF +++ F N R
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 288 GTPV---FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN--- 341
V + PE LG G D W G + M G T Q I
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
Query: 342 --NSLVFPDAMNPELR---------------------------NLLEGLLCKDPTRRLTL 372
V+P+ N EL +L++ LL DP +R+
Sbjct: 248 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS 307
Query: 373 NDVAKHTWVLGDNGP 387
+D H + D P
Sbjct: 308 DDALNHDFFWSDPMP 322
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 76
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 77 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 133
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMVPFVVTRY 192
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 193 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 251
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 252 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 311
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 312 ISVDEALQHPYI 323
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 131
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + MI G F G D ++K++
Sbjct: 191 YRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 310 ISVDEALQHPYI 321
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 17/206 (8%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA L+ + ++E+ I+
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA--------LKADAGPQHRSGWKQEIDIL 87
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +I+ +D + +V+EYV D + +IG + + + I G
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEG 146
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TAP 295
+ YLH + +H D+ N+L+ VKIGDF +++ + ++ R R G +PVF AP
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAP 206
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMI 321
EC + A+D W+ GVTLY ++
Sbjct: 207 ECLKEYKF-YYASDVWSFGVTLYELL 231
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 124 RKIGAGSYGKVVL-----YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
R++G G++GKV L + D A+KA P+ A D +RE ++
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD---------PTLAARKDFQREAELL 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-------------GQP----G 221
LQH +IV V D D MV EY++ D + F GQP G
Sbjct: 72 TNLQHEHIVKFYGVCGD--GDPLIMVFEYMKHG-DLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 222 AIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDN 280
+G S I SG++YL + VH D+ N LV + VKIGDF +S+ V+ D
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 281 DVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKI 339
+ P+ P + +D W+ GV L+ + G+ P+ + + + I
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
Query: 340 VNNSLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
++ P E+ +++ G ++P +RL + ++ K LG P
Sbjct: 249 TQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATP 297
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 115/274 (41%), Gaps = 54/274 (19%)
Query: 160 RVAPSETAMTDVR------REVLIMKMLQHPNIVNLIEVI--------DDPNS----DHF 201
RVA + +TD + RE+ I++ L H NIV + E++ DD S +
Sbjct: 38 RVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSV 97
Query: 202 YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP 261
Y+V EY+E N + G + E AR ++ ++ GL Y+H NV+H D+KP NL +
Sbjct: 98 YIVQEYMETDLAN--VLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT 155
Query: 262 SGTV-KIGDFSVSQVFE---DDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTL 317
V KIGDF ++++ + L T + +P L KA D WA G
Sbjct: 156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 215
Query: 318 YYMIIGQYPFLG----ETLQDTYDKI------------------VNNSLVFPD------- 348
M+ G+ F G E +Q + I + N + P
Sbjct: 216 AEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLL 275
Query: 349 -AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
++ E + LE +L P RLT + H ++
Sbjct: 276 PGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 79
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 80 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 136
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 195
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 196 YRAPEVILGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM 254
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 255 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 314
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 315 ISVDEALQHPYI 326
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 108 SEDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVA 162
SED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------- 53
Query: 163 PSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPG 221
+E + D RE+ I+K LQH NIV V + +++EY+ G +
Sbjct: 54 -TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE 112
Query: 222 AIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND 281
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 113 RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 282 VLR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 173 XXKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 135/312 (43%), Gaps = 58/312 (18%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
++MK + H NI+ L+ V S Y+V+E ++ Q E M+
Sbjct: 69 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ--VIQMELDHERMSY-L 125
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV 291
L ++ G+ +LH ++H D+KP N++V T+KI DF +++ + ++ T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRY 184
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN--------- 342
+ APE LG+ Y + D W+VG + M+ + F G D ++K++
Sbjct: 185 YRAPEVILGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM 243
Query: 343 ----------------------SLVFPDAMNP-----------ELRNLLEGLLCKDPTRR 369
+FPD + P + R+LL +L D ++R
Sbjct: 244 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 303
Query: 370 LTLNDVAKHTWV 381
+++++ +H ++
Sbjct: 304 ISVDEALQHPYI 315
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 119/294 (40%), Gaps = 39/294 (13%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +Y + KIG G+YG V + + + + I A + L E + RE+
Sbjct: 1 MQKYEKLEKIGEGTYGTVF---KAKNRETHEIVALKRVRLDD----DDEGVPSSALREIC 53
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H NIV L +V+ + +V E+ + G + + + +L ++
Sbjct: 54 LLKELKHKNIVRLHDVLH--SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL + H NV+H D+KP NLL+ +G +K+ DF +++ F T + P+
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYP-FLGETLQDTYDKIVN-----------NSL 344
G + D W+ G + P F G + D +I +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 345 VFPD------------------AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
PD +N R+LL+ LL +P +R++ + +H +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 164 SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 54/282 (19%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV-LIMKMLQHP 184
+G G+ G +V YR D + A+K R+ P + D REV L+ + +HP
Sbjct: 32 LGHGAEGTIV-YRGMFDNRDVAVK----------RILPECFSFAD--REVQLLRESDEHP 78
Query: 185 NIVNLIEVIDDPNSDHFYMVL------EYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
N++ D + + L EYVE K F G ++ L+ SG
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQK----DFAHLGLEPITL----LQQTTSG 130
Query: 239 LMYLHGHNVVHGDIKPDNLLVA---PSGTVK--IGDFSVSQVFE-DDNDVLRRS--PGTP 290
L +LH N+VH D+KP N+L++ G +K I DF + + + RRS PGT
Sbjct: 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 291 VFTAPE-----CCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSL 344
+ APE C TY D ++ G YY+I G +PF G++LQ + ++
Sbjct: 191 GWIAPEMLSEDCKENPTY---TVDIFSAGCVFYYVISEGSHPF-GKSLQRQANILLGACS 246
Query: 345 VFPDAMNPE------LRNLLEGLLCKDPTRRLTLNDVAKHTW 380
+ D ++PE R L+E ++ DP +R + V KH +
Sbjct: 247 L--DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 16/267 (5%)
Query: 143 GKHYAIKAFHKSHLSKLRV--APSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDH 200
GK Y + S L+ +V SE + D E+ I+ HPNIV L++ N +
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--N 81
Query: 201 FYMVLEYVEG-KWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLV 259
++++E+ G D + ES + + + L YLH + ++H D+K N+L
Sbjct: 82 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 141
Query: 260 APSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCLGLTYGGK----AADTWAV 313
G +K+ DF VS + RR GTP + APE + T + AD W++
Sbjct: 142 TLDGDIKLADFGVS-AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 200
Query: 314 GVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNPELRNLLEGLLCKDPTRRL 370
G+TL M + P KI + +L P + ++ L+ L K+ R
Sbjct: 201 GITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 260
Query: 371 TLNDVAKHTWVLGD-NGPIPQYLCWCK 396
T + + +H +V D N PI + + K
Sbjct: 261 TTSQLLQHPFVTVDSNKPIRELIAEAK 287
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 104 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 161
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 162 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 222 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 272
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 201 FYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA 260
++++EY+ G D + G E L++I+ GL YLH +H DIK N+L++
Sbjct: 96 LWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 261 PSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYM 320
G VK+ DF V+ D GTP + APE Y K AD W++G+T +
Sbjct: 155 EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK-ADIWSLGITAIEL 213
Query: 321 IIGQYPFLG-ETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
G+ P ++ + NN + ++ L KDP+ R T ++ KH
Sbjct: 214 AKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHK 273
Query: 380 WVLGDNGPIPQYLCWCKRDRLRR 402
+++ N YL DR +R
Sbjct: 274 FIV-KNSKKTSYLTEL-IDRFKR 294
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 77 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 195 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 94 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 151
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 152 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 212 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 121 VHVRKI-GAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+H+ KI G+G G+V R + G+ AIKA + + R D E
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--------RDFLSEAS 102
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDI 235
IM HPNI+ L V+ +V EY+E G D G LR +
Sbjct: 103 IMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---F 292
+G+ YL VH D+ N+LV + K+ DF +S+V EDD D + G + +
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKI 339
TAPE T+ A+D W+ GV ++ ++ G+ P+ T +D +
Sbjct: 221 TAPEAIAFRTF-SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 53
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
+E + D RE+ I+K LQH NIV V + +++EY+ G +
Sbjct: 54 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER 113
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 283 LR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 174 XKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 72
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 73 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 189
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 190 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 248
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 249 MRLCWKERPEDRPTFD 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 74
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 75 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 132 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 191
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 192 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 250
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 251 MRLCWKERPEDRPTFD 266
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 36/267 (13%)
Query: 89 LNGLICRQFPVKESNKLIR---SEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKH 145
LNG+ + P+ + NK+I+ S+ + G + Y + + IG GS+G VV ++
Sbjct: 10 LNGV--KLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFG-VVFQAKLVESDE 66
Query: 146 YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVI----DDPNSDHF 201
AIK + K RE+ IM++++HPN+V+L D +
Sbjct: 67 VAIKKVLQDKRFK-------------NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 202 YMVLEYVEG---KWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLL 258
+VLEYV + + + + Y+ ++ L Y+H + H DIKP NLL
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL 173
Query: 259 V-APSGTVKIGDFSVSQVF----EDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAV 313
+ PSG +K+ DF +++ + + + R + APE G T D W+
Sbjct: 174 LDPPSGVLKLIDFGSAKILIAGEPNVSXICSR-----YYRAPELIFGATNYTTNIDIWST 228
Query: 314 GVTLYYMIIGQYPFLGETLQDTYDKIV 340
G + ++ GQ F GE+ D +I+
Sbjct: 229 GCVMAELMQGQPLFPGESGIDQLVEII 255
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V+EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 68
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 69 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 126 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 185
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 186 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 244
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 245 MRLCWKERPEDRPTFD 260
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 35/258 (13%)
Query: 97 FPVKESNKLIRSEDENGTKMINEYVHVRK-IGAGSYGKVVLYRSSLDGKH---YAIKAFH 152
F ++ N+ +R E ++ + + K IG G +G+V R + GK AIK
Sbjct: 10 FTFEDPNQAVR---EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 153 KSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GK 211
+ K R D E IM HPNI++L V+ ++ EY+E G
Sbjct: 67 AGYTDKQR--------RDFLSEASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGS 116
Query: 212 WD-----NDG-FGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTV 265
D NDG F +G LR I SG+ YL + VH D+ N+LV +
Sbjct: 117 LDAFLRKNDGRFTVIQLVG------MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVC 170
Query: 266 KIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCLGLTYGGKAADTWAVGVTLY-YMI 321
K+ DF +S+V EDD + + G + +TAPE + A+D W+ G+ ++ M
Sbjct: 171 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS-ASDVWSYGIVMWEVMS 229
Query: 322 IGQYPFLGETLQDTYDKI 339
G+ P+ + QD I
Sbjct: 230 YGERPYWDMSNQDVIKAI 247
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 66
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 67 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 184 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 243 MRLCWKERPEDRPTFD 258
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 67
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 68 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 125 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 184
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 185 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 243
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 244 MRLCWKERPEDRPTFD 259
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 66
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 67 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 184 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 243 MRLCWKERPEDRPTFD 258
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H D+ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 186 PE-SLTESKFSVASDVWSFGVVLYELF 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V+EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVMEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 75
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 76 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 133 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 192
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 193 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 251
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 252 MRLCWKERPEDRPTFD 267
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 121 VHVRKI-GAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+H+ KI G+G G+V R + G+ AIKA + + R D E
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--------RDFLSEAS 102
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDI 235
IM HPNI+ L V+ +V EY+E G D G LR +
Sbjct: 103 IMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---F 292
+G+ YL VH D+ N+LV + K+ DF +S+V EDD D + G + +
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKI 339
TAPE T+ A+D W+ GV ++ ++ G+ P+ T +D +
Sbjct: 221 TAPEAIAFRTF-SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +++V EDD + + G + +T+PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA K P + ++E+ I+
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL------KADCGPQHR--SGWKQEIDIL 70
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +I+ +D +V+EYV D + +IG + + + I G
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEG 129
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TAP 295
+ YLH + +H ++ N+L+ VKIGDF +++ + ++ R R G +PVF AP
Sbjct: 130 MAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMI 321
EC + A+D W+ GVTLY ++
Sbjct: 190 ECLKEYKF-YYASDVWSFGVTLYELL 214
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ +R++G G++G V + R G+ A+K S
Sbjct: 3 EDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 53
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
+E + D RE+ I+K LQH NIV V + +++E++ G
Sbjct: 54 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER 113
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 283 LR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 174 XKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G G +G V+ + G+ AIK + ++P + E+ IMK L HP
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQE------LSPKNRERWCL--EIQIMKKLNHP 73
Query: 185 NIVNLIEVID-----DPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRDI 235
N+V+ EV D PN D + +EY EG K+ N F + E R L DI
Sbjct: 74 NVVSAREVPDGLQKLAPN-DLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDI 131
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTV---KIGDFSVSQVFEDDNDVLRRSPGTPVF 292
S L YLH + ++H D+KP+N+++ P KI D ++ D ++ GT +
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-DQGELCTEFVGTLQY 190
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL 328
APE Y D W+ G + I G PFL
Sbjct: 191 LAPELLEQKKY-TVTVDYWSFGTLAFECITGFRPFL 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR---E 174
+EY + IG G+YG V R L G+ AIK ++ + +T+ +R E
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIK----------KIPNAFDVVTNAKRTLRE 103
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDH-----FYMVLEYVEGKWDND-GFGQPGAIGESMA 228
+ I+K +H NI+ + +++ P + Y+VL+ +E QP +
Sbjct: 104 LKILKHFKHDNIIAIKDILR-PTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL--EHV 160
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF----EDDNDVLR 284
R +L ++ GL Y+H V+H D+KP NLLV + +KIGDF +++ + +
Sbjct: 161 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 285 RSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGE 330
T + APE L L +A D W+VG M+ + F G+
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 5 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 55
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
+E + D RE+ I+K LQH NIV V + +++EY+ G +
Sbjct: 56 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 115
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 116 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 283 LR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 176 XKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G G +G V+ + G+ AIK + ++P + E+ IMK L HP
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQE------LSPKNRERWCL--EIQIMKKLNHP 72
Query: 185 NIVNLIEVID-----DPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRDI 235
N+V+ EV D PN D + +EY EG K+ N F + E R L DI
Sbjct: 73 NVVSAREVPDGLQKLAPN-DLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDI 130
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTV---KIGDFSVSQVFEDDNDVLRRSPGTPVF 292
S L YLH + ++H D+KP+N+++ P KI D ++ D ++ GT +
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-DQGELCTEFVGTLQY 189
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL 328
APE Y D W+ G + I G PFL
Sbjct: 190 LAPELLEQKKY-TVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 4 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 54
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
+E + D RE+ I+K LQH NIV V + +++EY+ G +
Sbjct: 55 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 114
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 115 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 283 LR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 175 XKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 7 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 57
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
+E + D RE+ I+K LQH NIV V + +++EY+ G +
Sbjct: 58 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 117
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 118 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 177
Query: 283 LR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 178 XKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 6 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 56
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
+E + D RE+ I+K LQH NIV V + +++EY+ G +
Sbjct: 57 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 116
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 117 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 176
Query: 283 LR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 177 XKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 217
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 72
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 73 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 189
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 190 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 248
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 249 MRLCWKERPEDRPTFD 264
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA K P + ++E+ I+
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL------KADCGPQHR--SGWKQEIDIL 70
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +I+ +D +V+EYV D + +IG + + + I G
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEG 129
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TAP 295
+ YLH + +H ++ N+L+ VKIGDF +++ + ++ R R G +PVF AP
Sbjct: 130 MAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMI 321
EC + A+D W+ GVTLY ++
Sbjct: 190 ECLKEYKF-YYASDVWSFGVTLYELL 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 31 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 81
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
+E + D RE+ I+K LQH NIV V + +++EY+ G +
Sbjct: 82 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 141
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
I +Y I G+ YL +H D+ N+LV VKIGDF +++V D +
Sbjct: 142 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 201
Query: 283 LR-RSPG-TPVF-TAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ + PG +P+F APE L + A+D W+ GV LY +
Sbjct: 202 XKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELF 242
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 71
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 72 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 129 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 188
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 189 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 247
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 248 MRLCWKERPEDRPTFD 263
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 76
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 77 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 134 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 193
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 194 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 252
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 253 MRLCWKERPEDRPTFD 268
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V+EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 64
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H D+ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 185 PE-SLTESKFSVASDVWSFGVVLYELF 210
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 126 IGAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
IG G +G+V R + GK AIK + K R D E IM
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--------RDFLSEASIMGQFD 73
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKYLRDI 235
HPNI++L V+ ++ EY+E G D NDG F +G LR I
Sbjct: 74 HPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGI 125
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---F 292
SG+ YL + VH D+ N+LV + K+ DF +S+V EDD + + G + +
Sbjct: 126 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 185
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKI 339
TAPE + A+D W+ G+ ++ M G+ P+ + QD I
Sbjct: 186 TAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 66
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 67 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 184 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 243 MRLCWKERPEDRPTFD 258
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H D+ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 186 PE-SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 28/275 (10%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 77 LHECNSPYIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 134
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 135 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 192
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGET----LQDTYDKIVNN------SLVF 346
G Y + +D W++G++L M +G+YP + + + D IVN S VF
Sbjct: 193 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVF 251
Query: 347 PDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ E ++ + L K+P R L + H ++
Sbjct: 252 ----SLEFQDFVNKCLIKNPAERADLKQLMVHAFI 282
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF + +V EDD + + G + +T+PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR---E 174
+EY + IG G+YG V R L G+ AIK ++ + +T+ +R E
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIK----------KIPNAFDVVTNAKRTLRE 104
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDH-----FYMVLEYVEGKWDND-GFGQPGAIGESMA 228
+ I+K +H NI+ + +++ P + Y+VL+ +E QP +
Sbjct: 105 LKILKHFKHDNIIAIKDILR-PTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL--EHV 161
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF----EDDNDVLR 284
R +L ++ GL Y+H V+H D+KP NLLV + +KIGDF +++ + +
Sbjct: 162 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 285 RSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGE 330
T + APE L L +A D W+VG M+ + F G+
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 63
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H D+ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 184 PE-SLTESKFSVASDVWSFGVVLYELF 209
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 126 IGAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
IG G +G+V R + GK AIK + K R D E IM
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--------RDFLSEASIMGQFD 67
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKYLRDI 235
HPNI++L V+ ++ EY+E G D NDG F +G LR I
Sbjct: 68 HPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGI 119
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---F 292
SG+ YL + VH D+ N+LV + K+ DF +S+V EDD + + G + +
Sbjct: 120 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKI 339
TAPE + A+D W+ G+ ++ M G+ P+ + QD I
Sbjct: 180 TAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 61
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 62 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 119 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 178
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 179 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 237
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 238 MRLCWKERPEDRPTFD 253
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 53/302 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V + AIK +++P E T RE+ I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIK----------KISPFEHQTYCQRTLREIQI 94
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H N++ + +++ + Y+V + +E D + + +L
Sbjct: 95 LLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET--DLYKLLKSQQLSNDHICYFLYQ 152
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND---VLRRSPGTPV 291
I+ GL Y+H NV+H D+KP NLL+ + +KI DF ++++ + ++D L T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF---------------LGETLQDTY 336
+ APE L K+ D W+VG L M+ + F LG Q+
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 337 DKIVN-------NSL----------VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ I+N SL +FP + + L +LL+ +L +P +R+T+ + H
Sbjct: 273 NCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKAL-DLLDRMLTFNPNKRITVEEALAHP 331
Query: 380 WV 381
++
Sbjct: 332 YL 333
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 83
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H D+ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 204 PE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H D+ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 186 PE-SLTESKFSVASDVWSFGVVLYELF 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 10/211 (4%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E + F Q
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLG-ELRSFLQVRKF 106
Query: 224 GESMARK--YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND 281
+A Y + + L YL VH DI N+LV+ + VK+GDF +S+ ED
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTX 166
Query: 282 VLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKI 339
P+ + APE + A+D W GV ++ +++ G PF G D +I
Sbjct: 167 XKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 340 VNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
N L P P L +L+ DP+RR
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 83
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H D+ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 204 PE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVTEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 149/385 (38%), Gaps = 98/385 (25%)
Query: 97 FPVKESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKV--VLYRSSLDGKHYAIKAFHKS 154
F VK S++ R ED + EY K+G G+YG V + D K YA+K +
Sbjct: 7 FKVKLSSERERVED------LFEYEGC-KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT 59
Query: 155 HLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK-WD 213
+S RE+ +++ L+HPN+++L +V +++ +Y E W
Sbjct: 60 GIS-----------MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWH 108
Query: 214 NDGF-------GQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLV----APS 262
F +P + M + L I+ G+ YLH + V+H D+KP N+LV
Sbjct: 109 IIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 168
Query: 263 GTVKIGDFSVSQVFEDDNDVLRRSPGTPV-----------FTAPECCLGLTYGGKAADTW 311
G VKI D +++F SP P+ + APE LG + KA D W
Sbjct: 169 GRVKIADMGFARLFN--------SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 312 AVGVTLYYMIIGQYPF---------LGETLQDTYDKIVN------------------NSL 344
A+G ++ + F D D+I N +S
Sbjct: 221 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST 280
Query: 345 VFPD------------------AMNPELR--NLLEGLLCKDPTRRLTLNDVAKHTWVLGD 384
+ D + P+ + +LL+ LL DP +R+T + + L D
Sbjct: 281 LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340
Query: 385 NGPIPQYLCWCKRDRLRRDNTTQDS 409
P C+ +R+ T++
Sbjct: 341 PLPTSDVFAGCQIPYPKREFLTEEE 365
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 39/294 (13%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +Y + KIG G+YG V + + + + I A + L E + RE+
Sbjct: 1 MQKYEKLEKIGEGTYGTVF---KAKNRETHEIVALKRVRLDD----DDEGVPSSALREIC 53
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H NIV L +V+ + +V E+ + G + + + +L ++
Sbjct: 54 LLKELKHKNIVRLHDVLH--SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL + H NV+H D+KP NLL+ +G +K+ +F +++ F T + P+
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYP-FLGETLQDTYDKIVN-----------NSL 344
G + D W+ G + P F G + D +I +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 345 VFPD------------------AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
PD +N R+LL+ LL +P +R++ + +H +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V E +E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 164 SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 10/211 (4%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E + F Q
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLG-ELRSFLQVRKF 106
Query: 224 GESMARK--YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND 281
+A Y + + L YL VH DI N+LV+ + VK+GDF +S+ ED
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 166
Query: 282 VLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKI 339
P+ + APE + A+D W GV ++ +++ G PF G D +I
Sbjct: 167 YKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 340 VNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
N L P P L +L+ DP+RR
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVCEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 14 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 61
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 62 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 116
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 117 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 176
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 177 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 232
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 233 LHDLMCQCWRKDPEERPTFE 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 16 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 63
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 64 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 118
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 119 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 178
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 179 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 234
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 235 LHDLMCQCWRKDPEERPTFE 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + +G G++G+VV R++LD ++YAIK ++ +E ++ + EV +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIK----------KIRHTEEKLSTILSEVXL 55
Query: 178 MKMLQHPNIV----------NLIE-VIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGES 226
+ L H +V N ++ ++ EY E + D +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 227 MAR-KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV------------- 272
+ R I+ L Y+H ++H ++KP N+ + S VKIGDF +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 273 -SQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF-LGE 330
SQ +D L + GT + A E G + + D +++G+ + I YPF G
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGX 232
Query: 331 TLQDTYDKIVNNSLVFP----DAMNPELRNLLEGLLCKDPTRR 369
+ K+ + S+ FP D + ++ L+ DP +R
Sbjct: 233 ERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKR 275
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G+ V R G +AIK F +++S LR P + M RE ++K L H N
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--NNISFLR--PVDVQM----REFEVLKKLNHKN 68
Query: 186 IVNLIEVIDDPNSDHFYMVLE-------YVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
IV L + ++ + H +++E Y + ++ +G P ES LRD+V G
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP----ESEFLIVLRDVVGG 124
Query: 239 LMYLHGHNVVHGDIKPDNLL--VAPSG--TVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ +L + +VH +IKP N++ + G K+ DF ++ EDD + GT +
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-GTEEYLH 183
Query: 295 PECCLGLTYG-------GKAADTWAVGVTLYYMIIGQYPF 327
P+ G D W++GVT Y+ G PF
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V E +E G D+ LR I SG+ YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 224 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G+ V R G +AIK F +++S LR P + M RE ++K L H N
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--NNISFLR--PVDVQM----REFEVLKKLNHKN 68
Query: 186 IVNLIEVIDDPNSDHFYMVLE-------YVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
IV L + ++ + H +++E Y + ++ +G P ES LRD+V G
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP----ESEFLIVLRDVVGG 124
Query: 239 LMYLHGHNVVHGDIKPDNLL--VAPSG--TVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ +L + +VH +IKP N++ + G K+ DF ++ EDD + GT +
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY-GTEEYLH 183
Query: 295 PECCLGLTYG-------GKAADTWAVGVTLYYMIIGQYPF 327
P+ G D W++GVT Y+ G PF
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 123 VRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKM 180
V+++GAG +G+V + Y +S A+K P ++ E +MK
Sbjct: 18 VKRLGAGQFGEVWMGYYNNS---TKVAVKTLK----------PGTMSVQAFLEEANLMKT 64
Query: 181 LQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL---RDIVS 237
LQH +V L V+ + Y++ EY+ K F + G+ + K + I
Sbjct: 65 LQHDKLVRLYAVVT--REEPIYIITEYM-AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPE 296
G+ Y+ N +H D++ N+LV+ S KI DF +++V ED+ R P+ +TAPE
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 181
Query: 297 C----CLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDT 335
C + +D W+ G+ LY ++ G+ P+ G T D
Sbjct: 182 AINFGCFTIK-----SDVWSFGILLYEIVTYGKIPYPGRTNADV 220
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK ++S +E +MK L+H
Sbjct: 192 KLGQGCFGEV--WMGTWNGTTRVAIKTLKPGNMSP----------EAFLQEAQVMKKLRH 239
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 240 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGM 294
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF + ++ ED+ R+ P+ +TAPE
Sbjct: 295 AYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAA 354
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 355 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 410
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 411 LHDLMCQCWRKDPEERPTFE 430
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 14/233 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V E +E G D+ LR I SG+ YL
Sbjct: 77 PNIIRLEGVV--TKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPECCL 299
VH D+ N+L+ + K+ DF +S+V EDD + + G + +T+PE
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
+ A+D W+ G+ L+ M G+ P+ + QD K V+ P M+
Sbjct: 195 YRKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 245
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 23/261 (8%)
Query: 126 IGAGSYGKVV--LYRSSLDGKHY--AIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
IGAG +G+V + ++S K AIK + K RV D E IM
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--------DFLGEAGIMGQF 103
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLM 240
H NI+ L VI ++ EY+E G D + G LR I +G+
Sbjct: 104 SHHNIIRLEGVIS--KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV---FTAPEC 297
YL N VH D+ N+LV + K+ DF +S+V EDD + + G + +TAPE
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 298 CLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMN--PEL 354
+ A+D W+ G+ ++ M G+ P+ E K +N+ P M+ +
Sbjct: 222 ISYRKFTS-ASDVWSFGIVMWEVMTYGERPYW-ELSNHEVMKAINDGFRLPTPMDCPSAI 279
Query: 355 RNLLEGLLCKDPTRRLTLNDV 375
L+ ++ RR D+
Sbjct: 280 YQLMMQCWQQERARRPKFADI 300
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E G+ +
Sbjct: 56 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCT-------LGELRSF 105
Query: 224 GESMARKYLRDIVS----------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 273
+ RKY D+ S L YL VH DI N+LV+ + VK+GDF +S
Sbjct: 106 LQ--VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Query: 274 QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGET 331
+ ED P+ + APE + A+D W GV ++ +++ G PF G
Sbjct: 164 RYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
Query: 332 LQDTYDKIVNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
D +I N L P P L +L+ DP+RR
Sbjct: 223 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 10/211 (4%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E + F Q
Sbjct: 431 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLG-ELRSFLQVRKF 486
Query: 224 GESMARK--YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND 281
+A Y + + L YL VH DI N+LV+ + VK+GDF +S+ ED
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 546
Query: 282 VLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKI 339
P+ + APE + A+D W GV ++ +++ G PF G D +I
Sbjct: 547 YKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 340 VNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
N L P P L +L+ DP+RR
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E G+ +
Sbjct: 54 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCT-------LGELRSF 103
Query: 224 GESMARKYLRDIVS----------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 273
+ RKY D+ S L YL VH DI N+LV+ + VK+GDF +S
Sbjct: 104 LQ--VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Query: 274 QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGET 331
+ ED P+ + APE + A+D W GV ++ +++ G PF G
Sbjct: 162 RYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 220
Query: 332 LQDTYDKIVNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
D +I N L P P L +L+ DP+RR
Sbjct: 221 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 259
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E G+ +
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELC-------TLGELRSF 100
Query: 224 GESMARKYLRDIVS----------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 273
+ RKY D+ S L YL VH DI N+LV+ + VK+GDF +S
Sbjct: 101 LQ--VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 274 QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGET 331
+ ED P+ + APE + A+D W GV ++ +++ G PF G
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 332 LQDTYDKIVNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
D +I N L P P L +L+ DP+RR
Sbjct: 218 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E G+ +
Sbjct: 53 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELC-------TLGELRSF 102
Query: 224 GESMARKYLRDIVS----------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 273
+ RKY D+ S L YL VH DI N+LV+ + VK+GDF +S
Sbjct: 103 LQ--VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Query: 274 QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGET 331
+ ED P+ + APE + A+D W GV ++ +++ G PF G
Sbjct: 161 RYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 219
Query: 332 LQDTYDKIVNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
D +I N L P P L +L+ DP+RR
Sbjct: 220 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 258
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 15/221 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IGAG +G+V L GK A + L+ +E D E IM HPN
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVA-----IKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
+++L V+ S ++ E++E G D+ G LR I +G+ YL
Sbjct: 96 VIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD 153
Query: 245 HNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG----TPV-FTAPECCL 299
N VH D+ N+LV + K+ DF +S+ EDD + P+ +TAPE
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKI 339
+ A+D W+ G+ ++ M G+ P+ T QD + I
Sbjct: 214 YRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E G+ +
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELC-------TLGELRSF 100
Query: 224 GESMARKYLRDIVS----------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 273
+ RKY D+ S L YL VH DI N+LV+ + VK+GDF +S
Sbjct: 101 LQ--VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 274 QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGET 331
+ ED P+ + APE + A+D W GV ++ +++ G PF G
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 332 LQDTYDKIVNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
D +I N L P P L +L+ DP+RR
Sbjct: 218 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 43/279 (15%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++ + IG+G +G+V + +DGK Y IK RV + REV +
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIK----------RVKYNNEK---AEREVKAL 58
Query: 179 KMLQHPNIVNLIEVID----DPNSDH----------FYMVLEYVEG----KWDNDGFGQP 220
L H NIV+ D DP + ++ +E+ + +W G+
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 221 GAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN 280
+ + +A + I G+ Y+H +++ D+KP N+ + + VKIGDF + ++D
Sbjct: 119 --LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 176
Query: 281 DVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPF-LGETLQDTYDK 338
RS GT + +PE Y GK D +A+G+ L ++ + F + D D
Sbjct: 177 K-RXRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 234
Query: 339 IVNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
I++ D + + + LL+ LL K P R +++ +
Sbjct: 235 IIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E G+ +
Sbjct: 48 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELC-------TLGELRSF 97
Query: 224 GESMARKYLRDIVS----------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 273
+ RKY D+ S L YL VH DI N+LV+ + VK+GDF +S
Sbjct: 98 LQ--VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Query: 274 QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGET 331
+ ED P+ + APE + A+D W GV ++ +++ G PF G
Sbjct: 156 RYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
Query: 332 LQDTYDKIVNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
D +I N L P P L +L+ DP+RR
Sbjct: 215 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E G+ +
Sbjct: 79 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCT-------LGELRSF 128
Query: 224 GESMARKYLRDIVS----------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 273
+ RKY D+ S L YL VH DI N+LV+ + VK+GDF +S
Sbjct: 129 LQ--VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Query: 274 QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGET 331
+ ED P+ + APE + A+D W GV ++ +++ G PF G
Sbjct: 187 RYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
Query: 332 LQDTYDKIVNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
D +I N L P P L +L+ DP+RR
Sbjct: 246 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 284
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 73 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
+ +N Q + + + + I+ GL Y+H +++H D+KP NL V
Sbjct: 126 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 183
Query: 265 VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQ 324
+KI DF +++ +D+ + T + APE L + + D W+VG + ++ G+
Sbjct: 184 LKILDFGLARHTDDE---MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 325 YPFLGETLQDTYDKIV--------------------------------NNSLVFPDAMNP 352
F G D I+ N + VF A NP
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA-NP 299
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
+LLE +L D +R+T H + + P
Sbjct: 300 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 66
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVS 237
K LQH NIV V + +++EY+ G + I +Y I
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPG-TPVF-TA 294
G+ YL +H ++ N+LV VKIGDF +++V D + + + PG +P+F A
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMI 321
PE L + A+D W+ GV LY +
Sbjct: 187 PE-SLTESKFSVASDVWSFGVVLYELF 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK ++H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKIRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG +G+V + + K A+K+ + +S E +MK LQ
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 62
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 63 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H +++ N+LV+ + + KI DF ++++ ED+ R P+ +TAPE
Sbjct: 120 FIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 179
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 180 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 238
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 239 MRLCWKERPEDRPTFD 254
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 20/256 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++GAG G+V + + K A+K+ + +S E +MK LQ
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSP----------DAFLAEANLMKQLQ 66
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLM 240
H +V L V+ + Y++ EY+E D P I ++ + I G+
Sbjct: 67 HQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCL 299
++ N +H D++ N+LV+ + + KI DF ++++ ED R P+ +TAPE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAIN 183
Query: 300 GLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNL 357
T+ K +D W+ G+ L ++ G+ P+ G T + + +V PD EL L
Sbjct: 184 YGTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
Query: 358 LEGLLCKDPTRRLTLN 373
+ + P R T +
Sbjct: 243 MRLCWKERPEDRPTFD 258
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K K S + + RE+ ++K
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRT-------YRELRLLK 88
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 203
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 384 DNGP 387
+ P
Sbjct: 323 YHDP 326
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 32/260 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD----IVSGL 239
+V L V+ + + Y+V EY+ D G +G+ + L D I SG+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGM 127
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
Y+ N VH D+ N+LV + K+ DF ++++ ED+ R+ P+ +TAPE
Sbjct: 128 AYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNPELRNL 357
L + K +D W+ G+ L + G+ P+ G ++ D++ + PE
Sbjct: 188 LYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 243
Query: 358 LEGLLC----KDPTRRLTLN 373
L L+C KDP R T
Sbjct: 244 LHDLMCQCWRKDPEERPTFE 263
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 13 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 64
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIV 236
M L H N++ L V+ P MV E G + G +Y +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF--EDDNDVLRRSPGTP-VFT 293
G+ YL +H D+ NLL+A VKIGDF + + DD+ V++ P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
APE T+ A+DTW GVTL+ M GQ P++G
Sbjct: 182 APESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 10/211 (4%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
S++ +E L M+ HP+IV LI VI + + ++++E + F Q
Sbjct: 431 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLG-ELRSFLQVRKF 486
Query: 224 GESMARK--YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND 281
+A Y + + L YL VH DI N+LV+ + VK+GDF +S+ ED
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546
Query: 282 VLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKI 339
P+ + APE + A+D W GV ++ +++ G PF G D +I
Sbjct: 547 YKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 340 VNNS-LVFPDAMNPELRNLLEGLLCKDPTRR 369
N L P P L +L+ DP+RR
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 22 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR---------D 234
+V L V+ + + Y+V EY+ N G GE+ KYLR
Sbjct: 70 EKLVQLYAVVSE---EPIYIVTEYM-----NKGSLLDFLKGET--GKYLRLPQLVDMSAQ 119
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FT 293
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +T
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT 179
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNP 352
APE L + K +D W+ G+ L + G+ P+ G ++ D++ + P
Sbjct: 180 APEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPP 235
Query: 353 ELRNLLEGLLC----KDPTRRLTLN 373
E L L+C K+P R T
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 22 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR---------D 234
+V L V+ + + Y+V EY+ N G GE+ KYLR
Sbjct: 70 EKLVQLYAVVSE---EPIYIVTEYM-----NKGSLLDFLKGET--GKYLRLPQLVDMSAQ 119
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FT 293
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +T
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 179
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMNP 352
APE L + K +D W+ G+ L + G+ P+ G ++ D++ + P
Sbjct: 180 APEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPP 235
Query: 353 ELRNLLEGLLC----KDPTRRLTLN 373
E L L+C K+P R T
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 23 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIV 236
M L H N++ L V+ P MV E G + G +Y +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 131
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF--EDDNDVLRRSPGTP-VFT 293
G+ YL +H D+ NLL+A VKIGDF + + DD+ V++ P +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
APE T+ A+DTW GVTL+ M GQ P++G
Sbjct: 192 APESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIG 227
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 44/266 (16%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK + P + +E +MK L+H
Sbjct: 191 KLGQGCFGEV--WMGTWNGTTRVAIKT----------LKPGTMSPEAFLQEAQVMKKLRH 238
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLR--------- 233
+V L V+ + + Y+V EY+ +G + G+ G KYLR
Sbjct: 239 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAA 287
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-F 292
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
TAPE L + K +D W+ G+ L + G+ P+ G ++ D++ +
Sbjct: 348 TAPEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCP 403
Query: 352 PELRNLLEGLLC----KDPTRRLTLN 373
PE L L+C K+P R T
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 73 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
+ +N Q + + + + I+ GL Y+H +++H D+KP NL V
Sbjct: 126 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 183
Query: 265 VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQ 324
+KI DF +++ +D+ + T + APE L + + D W+VG + ++ G+
Sbjct: 184 LKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 325 YPFLGETLQDTYDKIV--------------------------------NNSLVFPDAMNP 352
F G D I+ N + VF A NP
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA-NP 299
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
+LLE +L D +R+T H + + P
Sbjct: 300 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 12 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 71
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 72 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
+ +N Q + + + + I+ GL Y+H +++H D+KP NL V
Sbjct: 125 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 182
Query: 265 VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQ 324
+KI DF +++ +D+ + T + APE L + + D W+VG + ++ G+
Sbjct: 183 LKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 325 YPFLGETLQDTYDKIV--------------------------------NNSLVFPDAMNP 352
F G D I+ N + VF A NP
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA-NP 298
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
+LLE +L D +R+T H + + P
Sbjct: 299 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 44/266 (16%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK + P + +E +MK L+H
Sbjct: 191 KLGQGCFGEV--WMGTWNGTTRVAIKT----------LKPGTMSPEAFLQEAQVMKKLRH 238
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLR--------- 233
+V L V+ + + Y+V EY+ +G + G+ G KYLR
Sbjct: 239 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAA 287
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-F 292
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
TAPE L + K +D W+ G+ L + G+ P+ G ++ D++ +
Sbjct: 348 TAPEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCP 403
Query: 352 PELRNLLEGLLC----KDPTRRLTLN 373
PE L L+C K+P R T
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N + + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKCAKLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 187
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 384 DNGP 387
+ P
Sbjct: 307 YHDP 310
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 132/323 (40%), Gaps = 55/323 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 ----DNGPI--PQYLCWCKRDRL 400
D+ P+ PQ + RD L
Sbjct: 311 YHDPDDEPVADPQDQSFESRDLL 333
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ IG+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAP 196
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 384 DNGP 387
+ P
Sbjct: 316 YHDP 319
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 36/286 (12%)
Query: 119 EYVHVRK-------------IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE 165
EY HVR+ +G G++GKV ++ G A K SE
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---------SE 57
Query: 166 TAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG-KWDNDGFGQPGAIG 224
+ D E+ I+ HP IV L+ + ++++E+ G D +
Sbjct: 58 EELEDYIVEIEILATCDHPYIVKLLGAYY--HDGKLWIMIEFCPGGAVDAIMLELDRGLT 115
Query: 225 ESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR 284
E + R ++ L +LH ++H D+K N+L+ G +++ DF VS ++ + +
Sbjct: 116 EPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQK 173
Query: 285 RSP--GTPVFTAPECCLGLTYGGKA----ADTWAVGVTLYYMIIGQYPFLGETLQDTYDK 338
R GTP + APE + T AD W++G+TL M + P K
Sbjct: 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
Query: 339 IVNN---SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
I + +L+ P + E R+ L+ L K+P R + + +H +V
Sbjct: 234 IAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 44/266 (16%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 18 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 65
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLR--------- 233
+V L V+ + + Y+V EY+ +G + G+ G KYLR
Sbjct: 66 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAA 114
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-F 292
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
TAPE L + K +D W+ G+ L + G+ P+ G ++ D++ +
Sbjct: 175 TAPEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCP 230
Query: 352 PELRNLLEGLLC----KDPTRRLTLN 373
PE L L+C K+P R T
Sbjct: 231 PECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE---TAMTDVRREVLIMKMLQ 182
IG G +GKV YR+ G A+KA R P E + +VR+E + ML+
Sbjct: 15 IGIGGFGKV--YRAFWIGDEVAVKA--------ARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 183 HPNIVNLIEV-IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPNI+ L V + +PN +V+E+ G N I + + I G+ Y
Sbjct: 65 HPNIIALRGVCLKEPN---LCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNY 120
Query: 242 LHGHNVV---HGDIKPDNLLVA--------PSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
LH +V H D+K N+L+ + +KI DF +++ + + + G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--SAAGAY 178
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNN-SLVFPD 348
+ APE + K +D W+ GV L+ ++ G+ PF G + L Y +N +L P
Sbjct: 179 AWMAPEVIRASMFS-KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS 237
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDV 375
L+E DP R + ++
Sbjct: 238 TCPEPFAKLMEDCWNPDPHSRPSFTNI 264
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 17 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIV 236
M L H N++ L V+ P MV E G + G +Y +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 125
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF--EDDNDVLRRSPGTP-VFT 293
G+ YL +H D+ NLL+A VKIGDF + + DD+ V++ P +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
APE T+ A+DTW GVTL+ M GQ P++G
Sbjct: 186 APESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRAP 197
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 384 DNGP 387
+ P
Sbjct: 317 YHDP 320
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 72
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 73 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
+ +N Q + + + + I+ GL Y+H +++H D+KP NL V
Sbjct: 126 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 183
Query: 265 VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQ 324
+KI DF +++ +D+ + T + APE L + + D W+VG + ++ G+
Sbjct: 184 LKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 325 YPFLGETLQDTYDKIV--------------------------------NNSLVFPDAMNP 352
F G D I+ N + VF A NP
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA-NP 299
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
+LLE +L D +R+T H + + P
Sbjct: 300 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 44/266 (16%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK + P + +E +MK L+H
Sbjct: 274 KLGQGCFGEV--WMGTWNGTTRVAIKT----------LKPGTMSPEAFLQEAQVMKKLRH 321
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLR--------- 233
+V L V+ + + Y+V EY+ +G + G+ G KYLR
Sbjct: 322 EKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAA 370
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-F 292
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
TAPE L + K +D W+ G+ L + G+ P+ G ++ D++ +
Sbjct: 431 TAPEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCP 486
Query: 352 PELRNLLEGLLC----KDPTRRLTLN 373
PE L L+C K+P R T
Sbjct: 487 PECPESLHDLMCQCWRKEPEERPTFE 512
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRAP 193
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 384 DNGP 387
+ P
Sbjct: 313 YHDP 316
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF + + +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 17 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIV 236
M L H N++ L V+ P MV E G + G +Y +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 125
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF--EDDNDVLRRSPGTP-VFT 293
G+ YL +H D+ NLL+A VKIGDF + + DD+ V++ P +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
APE T+ A+DTW GVTL+ M GQ P++G
Sbjct: 186 APESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 12 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 71
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 72 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
+ +N Q + + + + I+ GL Y+H +++H D+KP NL V
Sbjct: 125 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 182
Query: 265 VKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQ 324
+KI DF +++ +D+ + T + APE L + + D W+VG + ++ G+
Sbjct: 183 LKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 325 YPFLGETLQDTYDKIV--------------------------------NNSLVFPDAMNP 352
F G D I+ N + VF A NP
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA-NP 298
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGP 387
+LLE +L D +R+T H + + P
Sbjct: 299 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGXVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 197
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 258 SESARNYIQSLAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 384 DNGP 387
+ P
Sbjct: 317 YHDP 320
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N + + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKXQKLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 187
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 384 DNGP 387
+ P
Sbjct: 307 YHDP 310
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 13 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 64
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIV 236
M L H N++ L V+ P MV E G + G +Y +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF--EDDNDVLRRSPGTP-VFT 293
G+ YL +H D+ NLL+A VKIGDF + + DD+ V++ P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
APE T+ A+DTW GVTL+ M GQ P++G
Sbjct: 182 APESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 23 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIV 236
M L H N++ L V+ P MV E G + G +Y +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 131
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF--EDDNDVLRRSPGTP-VFT 293
G+ YL +H D+ NLL+A VKIGDF + + DD+ V++ P +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
APE T+ A+DTW GVTL+ M GQ P++G
Sbjct: 192 APESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIG 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 88
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 203
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 384 DNGP 387
+ P
Sbjct: 323 YHDP 326
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 13 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 64
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIV 236
M L H N++ L V+ P MV E G + G +Y +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF--EDDNDVLRRSPGTP-VFT 293
G+ YL +H D+ NLL+A VKIGDF + + DD+ V++ P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
APE T+ A+DTW GVTL+ M GQ P++G
Sbjct: 182 APESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 88
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 203
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 384 DNGP 387
+ P
Sbjct: 323 YHDP 326
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N + + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKXQKLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 87
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 145
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAP 202
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 384 DNGP 387
+ P
Sbjct: 322 YHDP 325
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 57
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 58 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 173
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGE----------TLQDTYDKIVNNSLV- 345
G Y + +D W++G++L M +G+YP + + D IVN
Sbjct: 174 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPK 232
Query: 346 FPDAM-NPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
P + + E ++ + L K+P R L + H ++
Sbjct: 233 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 86
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 144
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 201
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
Query: 384 DNGP 387
+ P
Sbjct: 321 YHDP 324
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAP 187
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 384 DNGP 387
+ P
Sbjct: 307 YHDP 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 87
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 145
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 202
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 384 DNGP 387
+ P
Sbjct: 322 YHDP 325
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAP 196
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 384 DNGP 387
+ P
Sbjct: 316 YHDP 319
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 193
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 384 DNGP 387
+ P
Sbjct: 313 YHDP 316
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 196
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 384 DNGP 387
+ P
Sbjct: 316 YHDP 319
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 75
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 133
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 134 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 190
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
Query: 384 DNGP 387
+ P
Sbjct: 310 YHDP 313
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 99
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N + + + + + I
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKCQKLTDDHVQFLIYQI 157
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MXGYVATRWYRAP 214
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 384 DNGP 387
+ P
Sbjct: 334 YHDP 337
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 123 VRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKM 180
V+K+GAG +G+V + Y +S A+K P ++ E +MK
Sbjct: 17 VKKLGAGQFGEVWMGYYNNS---TKVAVKTLK----------PGTMSVQAFLEEANLMKT 63
Query: 181 LQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL---RDIVS 237
LQH +V L V+ + Y++ E++ K F + G+ + K + I
Sbjct: 64 LQHDKLVRLYAVVT--KEEPIYIITEFM-AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPE 296
G+ Y+ N +H D++ N+LV+ S KI DF +++V ED+ R P+ +TAPE
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
Query: 297 C----CLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDT 335
C + ++ W+ G+ LY ++ G+ P+ G T D
Sbjct: 181 AINFGCFTIK-----SNVWSFGILLYEIVTYGKIPYPGRTNADV 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 44/266 (16%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK + P + +E +MK L+H
Sbjct: 191 KLGQGCFGEV--WMGTWNGTTRVAIKT----------LKPGTMSPEAFLQEAQVMKKLRH 238
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLR--------- 233
+V L V+ + + Y+V EY+ +G + G+ G KYLR
Sbjct: 239 EKLVQLYAVVSE---EPIYIVGEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAA 287
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-F 292
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
TAPE L + K +D W+ G+ L + G+ P+ G ++ D++ +
Sbjct: 348 TAPEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCP 403
Query: 352 PELRNLLEGLLC----KDPTRRLTLN 373
PE L L+C K+P R T
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 193
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 384 DNGP 387
+ P
Sbjct: 313 YHDP 316
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 197
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 384 DNGP 387
+ P
Sbjct: 317 YHDP 320
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 99
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 157
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 214
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 384 DNGP 387
+ P
Sbjct: 334 YHDP 337
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 187
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 384 DNGP 387
+ P
Sbjct: 307 YHDP 310
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 193
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 384 DNGP 387
+ P
Sbjct: 313 YHDP 316
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 74
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 132
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 133 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 189
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
Query: 384 DNGP 387
+ P
Sbjct: 309 YHDP 312
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 198
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 384 DNGP 387
+ P
Sbjct: 318 YHDP 321
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 28/234 (11%)
Query: 120 YVHVRK-IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
YV + + IGAG +G+V R GK + A + L+ +E + E IM
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVA-----IKTLKGGYTERQRREFLSEASIM 69
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKY 231
+HPNI+ L V+ NS ++ E++E G D NDG F +G
Sbjct: 70 GQFEHPNIIRLEGVVT--NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG------M 121
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND--VLRRSPGT 289
LR I SG+ YL + VH D+ N+LV + K+ DF +S+ E+++ S G
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 290 PV---FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKI 339
+ +TAPE + A+D W+ G+ ++ M G+ P+ + QD + I
Sbjct: 182 KIPIRWTAPE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 234
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 120 YVHVRK-IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
YV + + IGAG +G+V R GK + A + L+ +E + E IM
Sbjct: 17 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVA-----IKTLKGGYTERQRREFLSEASIM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKY 231
+HPNI+ L V+ NS ++ E++E G D NDG F +G
Sbjct: 72 GQFEHPNIIRLEGVVT--NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG------M 123
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE----DDNDVLRRSP 287
LR I SG+ YL + VH D+ N+LV + K+ DF +S+ E D +
Sbjct: 124 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGG 183
Query: 288 GTPV-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKI 339
P+ +TAPE + A+D W+ G+ ++ M G+ P+ + QD + I
Sbjct: 184 KIPIRWTAPE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 236
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 73
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 131
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 188
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 384 DNGP 387
+ P
Sbjct: 308 YHDP 311
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 73
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 131
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 188
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 384 DNGP 387
+ P
Sbjct: 308 YHDP 311
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 196
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 384 DNGP 387
+ P
Sbjct: 316 YHDP 319
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 42/283 (14%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD----VRR 173
NE + ++IG G +G V R D AIK+ L + ET M + +R
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL------ILGDSEGETEMIEKFQEFQR 72
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYL 232
EV IM L HPNIV L ++ +P MV+E+V G + + I S+ + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 233 RDIVSGLMYLHGHN--VVHGDIKPDNLLV------APSGTVKIGDFSVSQVFEDDNDVLR 284
DI G+ Y+ N +VH D++ N+ + AP K+ DFS+SQ L
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV-CAKVADFSLSQQSVHSVSGLL 187
Query: 285 RSPGTPVFTAPECCLG--LTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN 342
G + APE +Y K ADT++ + LY ++ G+ PF + +Y KI
Sbjct: 188 ---GNFQWMAPETIGAEEESYTEK-ADTYSFAMILYTILTGEGPF----DEYSYGKIKFI 239
Query: 343 SLV--------FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
+++ P+ P LRN++E DP +R + + K
Sbjct: 240 NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 56/292 (19%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++ + IG+G +G+V + +DGK Y I+ RV + REV +
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIR----------RVKYNNEK---AEREVKAL 59
Query: 179 KMLQHPNIVNL----------IEVIDDP--NSDH---------------FYMVLEYVEG- 210
L H NIV+ E DD +SD+ ++ +E+ +
Sbjct: 60 AKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 211 ---KWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKI 267
+W G+ + + +A + I G+ Y+H ++H D+KP N+ + + VKI
Sbjct: 120 TLEQWIEKRRGEK--LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 268 GDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYP 326
GDF + ++D RS GT + +PE Y GK D +A+G+ L ++ +
Sbjct: 178 GDFGLVTSLKNDGKRT-RSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTA 235
Query: 327 F-LGETLQDTYDKIVNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
F + D D I++ D + + + LL+ LL K P R +++ +
Sbjct: 236 FETSKFFTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILR 281
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 197
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 384 DNGP 387
+ P
Sbjct: 317 YHDP 320
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IGAG +G+V L GK A + L+ +E D E IM HPN
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVA-----IKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
+++L V+ S ++ E++E G D+ G LR I +G+ YL
Sbjct: 70 VIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD 127
Query: 245 HNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG----TPV-FTAPECCL 299
N VH + N+LV + K+ DF +S+ EDD + P+ +TAPE
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 300 GLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKI 339
+ A+D W+ G+ ++ M G+ P+ T QD + I
Sbjct: 188 YRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 23/269 (8%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
V ++G G++GKV ++ G A K SE + D E+ I+
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETK---------SEEELEDYIVEIEILATCD 66
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG-KWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HP IV L+ + ++++E+ G D + E + R ++ L +
Sbjct: 67 HPYIVKLLGAYY--HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNF 124
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPVFTAPECCL 299
LH ++H D+K N+L+ G +++ DF VS ++ + +R GTP + APE +
Sbjct: 125 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVM 182
Query: 300 GLTYGGKA----ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN---SLVFPDAMNP 352
T AD W++G+TL M + P KI + +L+ P +
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSV 242
Query: 353 ELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
E R+ L+ L K+P R + + +H +V
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ D+ + T + AP
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAP 198
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 384 DNGP 387
+ P
Sbjct: 318 YHDP 321
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ D+ + T + AP
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAP 198
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 384 DNGP 387
+ P
Sbjct: 318 YHDP 321
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ D+ + T + AP
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAP 198
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 384 DNGP 387
+ P
Sbjct: 318 YHDP 321
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 20/270 (7%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHK--SHLSKLRVAPSETAMTDVRR 173
M + Y R I +GSYG V S +G AIK S + + V R
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 174 EVLIMKMLQHPNIVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK 230
E+ ++ HPNI+ L ++ ++P Y+V E + Q I +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
++ I+ GL LH VVH D+ P N+L+A + + I DF++++ ED D + T
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTH 196
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------N 341
+ APE + K D W+ G + M + F G T + +KIV
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLT 371
+ ++F +P R+ L L P R T
Sbjct: 257 DVVMFS---SPSARDYLRNSLSNVPARAWT 283
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 20/270 (7%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHK--SHLSKLRVAPSETAMTDVRR 173
M + Y R I +GSYG V S +G AIK S + + V R
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 174 EVLIMKMLQHPNIVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK 230
E+ ++ HPNI+ L ++ ++P Y+V E + Q I +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTP 290
++ I+ GL LH VVH D+ P N+L+A + + I DF++++ ED D + T
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTH 196
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------N 341
+ APE + K D W+ G + M + F G T + +KIV
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 342 NSLVFPDAMNPELRNLLEGLLCKDPTRRLT 371
+ ++F +P R+ L L P R T
Sbjct: 257 DVVMFS---SPSARDYLRNSLSNVPARAWT 283
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 124/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI D+ +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ + ++ ++ +G G +G V ++ +D +YAIK ++R+ E A V RE
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIK--------RIRLPNRELAREKVMRE 53
Query: 175 VLIMKMLQHPNIV---------NLIEVIDDPNSDHFYMVLEYVEGKWDN--DGFGQPGAI 223
V + L+HP IV N E + P+S Y+ ++ + +N D I
Sbjct: 54 VKALAKLEHPGIVRYFNAWLEKNTTEKLQ-PSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 224 GE---SMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN 280
E S+ I + +LH ++H D+KP N+ VK+GDF + + D
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 281 D---VLRRSP---------GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
+ VL P GT ++ +PE G +Y K D +++G+ L+ ++ YPF
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHK-VDIFSLGLILFELL---YPF 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 124/303 (40%), Gaps = 47/303 (15%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y + +G+G+YG V G A+K + S + + RE+ ++K
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT-------YRELRLLK 105
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 163
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI DF +++ +D+ + T + AP
Sbjct: 164 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 220
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN-------------- 341
E L + D W+VG + ++ G+ F G + +I+
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 342 --------NSLV------FPDAM---NPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGD 384
NSL F D NP +LLE +L D +R+T ++ H +
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
Query: 385 NGP 387
+ P
Sbjct: 341 HDP 343
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 44/266 (16%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 15 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 62
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLR--------- 233
+V L V+ + + +V EY+ +G + G+ G KYLR
Sbjct: 63 EKLVQLYAVVSE---EPIXIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAA 111
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-F 292
I SG+ Y+ N VH D++ N+LV + K+ DF ++++ ED+ R+ P+ +
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNNSLVFPDAMN 351
TAPE L + K +D W+ G+ L + G+ P+ G ++ D++ +
Sbjct: 172 TAPEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCP 227
Query: 352 PELRNLLEGLLC----KDPTRRLTLN 373
PE L L+C K+P R T
Sbjct: 228 PECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 33/277 (11%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV-LIMKML 181
V +G G+YG+V R G+ AIK + V E ++++E+ ++ K
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKV--------MDVTGDEEE--EIKQEINMLKKYS 78
Query: 182 QHPNIVNLIEVIDDPN----SDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL----R 233
H NI N D ++V+E+ D G ++ +++ R
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK--NTKGNTLKEEWIAYICR 136
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV 291
+I+ GL +LH H V+H DIK N+L+ + VK+ DF VS D V RR+ GTP
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPY 194
Query: 292 FTAPECCL-----GLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSL-- 344
+ APE TY K +D W++G+T M G P I N
Sbjct: 195 WMAPEVIACDENPDATYDFK-SDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR 253
Query: 345 VFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
+ + + ++ +E L K+ ++R + KH ++
Sbjct: 254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 128/292 (43%), Gaps = 55/292 (18%)
Query: 116 MINEY-VHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+I++Y V + +G G GKV+ + + +A+K L+ P RRE
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--------LQDCPK------ARRE 60
Query: 175 V-LIMKMLQHPNIVNLIEVIDDPNSDH--FYMVLEYVEGKWDNDGFGQPG--AIGESMAR 229
V L + Q P+IV +++V ++ + +V+E ++G G A E A
Sbjct: 61 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ ++ I + YLH N+ H D+KP+NLL P+ +K+ DF ++
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE----------- 169
Query: 287 PGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLG----ETLQDTYDKIVNN 342
G Y K+ D W++GV +Y ++ G PF +I
Sbjct: 170 -----------TTGEKY-DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 217
Query: 343 SLVFPD----AMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQ 390
FP+ ++ E++ L+ LL +PT+R+T+ + H W++ + +PQ
Sbjct: 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQ 268
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD----VRR 173
NE + ++IG G +G V R D AIK+ L + ET M + +R
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL------ILGDSEGETEMIEKFQEFQR 72
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYL 232
EV IM L HPNIV L ++ +P MV+E+V G + + I S+ + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 233 RDIVSGLMYLHGHN--VVHGDIKPDNLLV------APSGTVKIGDFSVSQVFEDDNDVLR 284
DI G+ Y+ N +VH D++ N+ + AP K+ DF +SQ L
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV-CAKVADFGLSQQSVHSVSGLL 187
Query: 285 RSPGTPVFTAPECCLG--LTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN 342
G + APE +Y K ADT++ + LY ++ G+ PF + +Y KI
Sbjct: 188 ---GNFQWMAPETIGAEEESYTEK-ADTYSFAMILYTILTGEGPF----DEYSYGKIKFI 239
Query: 343 SLV--------FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
+++ P+ P LRN++E DP +R + + K
Sbjct: 240 NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 84
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 85 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 142
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 143 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 200
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
G Y + +D W++G++L M +G+YP
Sbjct: 201 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPI 230
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 32/294 (10%)
Query: 90 NGLICRQFPVKESNKLIRSEDE---NGTKM-INEYVHVRKIGAGSYGKVVL--YRSSLDG 143
+GL R K + ++DE +G + + E ++ IG G +G V+L YR G
Sbjct: 161 DGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR----G 216
Query: 144 KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYM 203
A+K ++ +A E +M L+H N+V L+ VI + Y+
Sbjct: 217 NKVAVKCIKNDATAQAFLA-----------EASVMTQLRHSNLVQLLGVIVEEKGG-LYI 264
Query: 204 VLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP 261
V EY+ D G +G K+ D+ + YL G+N VH D+ N+LV+
Sbjct: 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 324
Query: 262 SGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYM 320
K+ DF +++ D + PV +TAPE + K +D W+ G+ L+ +
Sbjct: 325 DNVAKVSDFGLTKEASSTQDTGK----LPVKWTAPEALREKKFSTK-SDVWSFGILLWEI 379
Query: 321 I-IGQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRNLLEGLLCKDPTRRLTL 372
G+ P+ L+D ++ + PD P + ++++ D R T
Sbjct: 380 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTF 433
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD----VRR 173
NE + ++IG G +G V R D AIK+ L + ET M + +R
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL------ILGDSEGETEMIEKFQEFQR 72
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYL 232
EV IM L HPNIV L ++ +P MV+E+V G + + I S+ + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 233 RDIVSGLMYLHGHN--VVHGDIKPDNLLV------APSGTVKIGDFSVSQVFEDDNDVLR 284
DI G+ Y+ N +VH D++ N+ + AP K+ DF SQ L
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV-CAKVADFGTSQQSVHSVSGLL 187
Query: 285 RSPGTPVFTAPECCLG--LTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN 342
G + APE +Y K ADT++ + LY ++ G+ PF + +Y KI
Sbjct: 188 ---GNFQWMAPETIGAEEESYTEK-ADTYSFAMILYTILTGEGPF----DEYSYGKIKFI 239
Query: 343 SLV--------FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
+++ P+ P LRN++E DP +R + + K
Sbjct: 240 NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 38/226 (16%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG GSYG V L+ + AIK LRV + RE+ I+ L H +
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKI-------LRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 186 IVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+V +++++ D D Y+VLE + + F P + E + L +++ G+ Y+
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKK-LFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF---EDDNDVLRRSPG----------- 288
H ++H D+KP N LV +VK+ DF +++ E+ N L SP
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 289 -------------TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI 321
T + APE L +A D W++G ++
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V + G A+K K L RV E++
Sbjct: 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----------EELV 102
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG Q G + E A YL +
Sbjct: 103 ACAGLSSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQAL 160
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGT-VKIGDFSVSQVFEDDNDVLRRS-------PG 288
GL YLH ++HGD+K DN+L++ G+ + DF + + D L +S PG
Sbjct: 161 EGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG--LGKSLLTGDYIPG 218
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
T APE +G K D W+ + +M+ G +P+
Sbjct: 219 TETHMAPEVVMGKPCDAK-VDIWSSCCMMLHMLNGCHPW 256
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 119
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 120 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 177
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 178 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 235
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
G Y + +D W++G++L M +G+YP
Sbjct: 236 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPI 265
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V + G A+K K L RV E++
Sbjct: 73 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----------EELV 118
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG Q G + E A YL +
Sbjct: 119 ACAGLSSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQAL 176
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGT-VKIGDFSVSQVFEDDNDVLRRS-------PG 288
GL YLH ++HGD+K DN+L++ G+ + DF + + D L +S PG
Sbjct: 177 EGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG--LGKSLLTGDYIPG 234
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
T APE +G K D W+ + +M+ G +P+
Sbjct: 235 TETHMAPEVVMGKPCDAK-VDIWSSCCMMLHMLNGCHPW 272
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 61
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND--VLRRSPGTPVF-T 293
G+ YL VH D+ N+LV VKI DF ++++ D D V+R +P+F
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMI 321
APE L + +D W+ GV LY +
Sbjct: 182 APE-SLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 61/310 (19%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR--REVLIMKMLQH 183
+G G+YG V G+ AIK ++ P + + +R RE+ I+K +H
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIK----------KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 184 PNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
NI+ + I P+S + Y++ E ++ D + + + ++ + +
Sbjct: 69 ENIITIFN-IQRPDSFENFNEVYIIQELMQT--DLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFED---DNDV-------LRRSPGT 289
LHG NV+H D+KP NLL+ + +K+ DF ++++ ++ DN + T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 290 PVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------N 341
+ APE L +A D W+ G L + + + F G + I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 342 NSL----------------VFPDA--------MNPELRNLLEGLLCKDPTRRLTLNDVAK 377
N L ++P A +NP+ +LL+ +L DP +R+T + +
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 378 HTWVLGDNGP 387
H ++ + P
Sbjct: 306 HPYLQTYHDP 315
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G+G+YG V + + A+K + S + RE+ ++K L+
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA-------RRTYRELRLLKHLK 85
Query: 183 HPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
H N++ L++V S Y+V + +N Q A+ + + + ++ G
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ--ALSDEHVQFLVYQLLRG 143
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L Y+H ++H D+KP N+ V ++I DF +++ +++ + T + APE
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYRAPEIM 200
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
L + + D W+VG + ++ G+ F G D +I+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 61/310 (19%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR--REVLIMKMLQH 183
+G G+YG V G+ AIK ++ P + + +R RE+ I+K +H
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIK----------KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 184 PNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
NI+ + I P+S + Y++ E ++ D + + + ++ + +
Sbjct: 69 ENIITIFN-IQRPDSFENFNEVYIIQELMQT--DLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE----DDNDVLRRSPGTPVFT-- 293
LHG NV+H D+KP NLL+ + +K+ DF ++++ + D+++ + G F
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 294 ----APECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------N 341
APE L +A D W+ G L + + + F G + I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 342 NSL----------------VFPDA--------MNPELRNLLEGLLCKDPTRRLTLNDVAK 377
N L ++P A +NP+ +LL+ +L DP +R+T + +
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 378 HTWVLGDNGP 387
H ++ + P
Sbjct: 306 HPYLQTYHDP 315
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V + G A+K K L RV E++
Sbjct: 71 VHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----------EELV 116
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG Q G + E A YL +
Sbjct: 117 ACAGLSSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQAL 174
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGT-VKIGDFSVSQVFEDDNDVLRRS-------PG 288
GL YLH ++HGD+K DN+L++ G+ + DF + + D L +S PG
Sbjct: 175 EGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG--LGKSLLTGDYIPG 232
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
T APE +G K D W+ + +M+ G +P+
Sbjct: 233 TETHMAPEVVMGKPCDAK-VDIWSSCCMMLHMLNGCHPW 270
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V G A+K K L R E++
Sbjct: 73 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRA-----------EELM 118
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG + G + E A YL +
Sbjct: 119 ACAGLTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQAL 176
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGT-VKIGDFSVSQVFEDD---NDVLRRS--PGTP 290
GL YLH ++HGD+K DN+L++ G+ + DF + + D D+L PGT
Sbjct: 177 EGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTE 236
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
APE LG + K D W+ + +M+ G +P+
Sbjct: 237 THMAPEVVLGRSCDAK-VDVWSSCCMMLHMLNGCHPW 272
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 65
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND--VLRRSPGTPVF-T 293
G+ YL VH D+ N+LV VKI DF ++++ D D V+R +P+F
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMI 321
APE L + +D W+ GV LY +
Sbjct: 186 APE-SLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI F +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 132/310 (42%), Gaps = 61/310 (19%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR--REVLIMKMLQH 183
+G G+YG V G+ AIK ++ P + + +R RE+ I+K +H
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIK----------KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 184 PNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
NI+ + I P+S + Y++ E ++ D + + + ++ + +
Sbjct: 69 ENIITIFN-IQRPDSFENFNEVYIIQELMQT--DLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE----DDNDVLRRSPG------T 289
LHG NV+H D+KP NLL+ + +K+ DF ++++ + D+++ + G T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 290 PVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------N 341
+ APE L +A D W+ G L + + + F G + I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 342 NSL----------------VFPDA--------MNPELRNLLEGLLCKDPTRRLTLNDVAK 377
N L ++P A +NP+ +LL+ +L DP +R+T + +
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 378 HTWVLGDNGP 387
H ++ + P
Sbjct: 306 HPYLQTYHDP 315
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 26/259 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
++++G G +G+V + + +G AIK P + E IMK L
Sbjct: 14 IKRLGNGQFGEV--WMGTWNGNTKVAIKTLK----------PGTMSPESFLEEAQIMKKL 61
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRDIVS 237
+H +V L V+ + + Y+V EY+ + DG G+ A+ + +
Sbjct: 62 KHDKLVQLYAVVSE---EPIYIVTEYMNKGSLLDFLKDGEGR--ALKLPNLVDMAAQVAA 116
Query: 238 GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPE 296
G+ Y+ N +H D++ N+LV KI DF ++++ ED+ R+ P+ +TAPE
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPEL 354
L + K +D W+ G+ L ++ G+ P+ G ++ +++ + P L
Sbjct: 177 AALYGRFTIK-SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISL 235
Query: 355 RNLLEGLLCKDPTRRLTLN 373
L+ KDP R T
Sbjct: 236 HELMIHCWKKDPEERPTFE 254
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 64
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND--VLRRSPGTPVF-T 293
G+ YL VH D+ N+LV VKI DF ++++ D D V+R +P+F
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMI 321
APE L + +D W+ GV LY +
Sbjct: 185 APE-SLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 57
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 58 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 173
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
G Y + +D W++G++L M +G+YP
Sbjct: 174 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPI 203
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 77
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDND--VLRRSPGTPVF-T 293
G+ YL VH D+ N+LV VKI DF ++++ D D V+R +P+F
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMI 321
APE L + +D W+ GV LY +
Sbjct: 198 APE-SLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 57
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 58 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 173
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
G Y + +D W++G++L M +G+YP
Sbjct: 174 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPI 203
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI D +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 22/258 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G YG+V + A+K + + + + +E +MK ++H
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME----------VEEFLKEAAVMKEIKH 87
Query: 184 PNIVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
PN+V L+ V ++ P FY+V EY+ D + + + I S +
Sbjct: 88 PNLVQLLGVCTLEPP----FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAM 143
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 144 EYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 203
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
T+ K +D WA GV L+ + G P+ G L YD + + P+ P++
Sbjct: 204 AYNTFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYE 262
Query: 357 LLEGLLCKDPTRRLTLND 374
L+ P R + +
Sbjct: 263 LMRACWKWSPADRPSFAE 280
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 57
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 58 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 173
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
G Y + +D W++G++L M +G+YP
Sbjct: 174 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V G A K H L + P+ + RE+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPA--IRNQIIRELQV 57
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + G I E + K ++
Sbjct: 58 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + +PE
Sbjct: 116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMSPE 173
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
G Y + +D W++G++L M +G+YP
Sbjct: 174 RLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPI 203
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G+G+YG V + + A+K + S + + RE+ ++K L+
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT-------YRELRLLKHLK 85
Query: 183 HPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
H N++ L++V S Y+V + +N Q A+ + + + ++ G
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQFLVYQLLRG 143
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L Y+H ++H D+KP N+ V ++I DF +++ +++ + T + APE
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYRAPEIM 200
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
L + + D W+VG + ++ G+ F G D +I+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI D +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 30/263 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++Y VRK+G G Y +V + + + +K +K ++RE+ I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK------------IKREIKI 84
Query: 178 MKMLQH-PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDI 235
++ L+ PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEI 140
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTA 294
+ L Y H ++H D+KP N+++ +++ D+ +++ + + R + F
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKG 199
Query: 295 PECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------F 346
PE + + D W++G L MI + PF D YD++V + V +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDY 257
Query: 347 PDAMNPELRNLLEGLLCKDPTRR 369
D N EL +L + +R
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKR 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 41/226 (18%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ +H +G G +G+ + G+ +K + E +EV +
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKEL---------IRFDEETQRTFLKEVKV 60
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY------ 231
M+ L+HPN++ I V+ +F + EY++G G I +SM +Y
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNF--ITEYIKG-------GTLRGIIKSMDSQYPWSQRV 111
Query: 232 --LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN---DVLR-- 284
+DI SG+ YLH N++H D+ N LV + V + DF ++++ D+ + LR
Sbjct: 112 SFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 285 RSP---------GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI 321
+ P G P + APE G +Y K D ++ G+ L +I
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEK-VDVFSFGIVLCEII 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 18/220 (8%)
Query: 172 RREVLIMKMLQHPNIVNLIEVIDD--PNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
+ E +K LQHPNIV + + +V E + + R
Sbjct: 73 KEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLR 132
Query: 230 KYLRDIVSGLMYLHGHN--VVHGDIKPDNLLVA-PSGTVKIGDFSVSQVFEDDNDVLRRS 286
+ R I+ GL +LH ++H D+K DN+ + P+G+VKIGD ++ + +
Sbjct: 133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFAKAV 190
Query: 287 PGTPVFTAPECCLGLTYGGK---AADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVN- 341
GTP F APE Y K + D +A G +YP+ + Y ++ +
Sbjct: 191 IGTPEFXAPE-----XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG 245
Query: 342 -NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
F PE++ ++EG + ++ R ++ D+ H +
Sbjct: 246 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+K+GAG +G+V + + KH + ++ + P ++ E +MK LQH
Sbjct: 21 KKLGAGQFGEVWM---ATYNKH--------TKVAVKTMKPGSMSVEAFLAEANVMKTLQH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLMY 241
+V L V+ + Y++ E++ D + + + + I G+ +
Sbjct: 70 DKLVKLHAVV---TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 126
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCLG 300
+ N +H D++ N+LV+ S KI DF +++V ED+ R P+ +TAPE
Sbjct: 127 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 186
Query: 301 LTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
++ K +D W+ G+ L ++ G+ P+ G
Sbjct: 187 GSFTIK-SDVWSFGILLMEIVTYGRIPYPG 215
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
+ GL Y+H +++H D+KP NL V +KI D +++ +D+ + T + AP
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE---MTGYVATRWYRAP 191
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV--------------- 340
E L + + D W+VG + ++ G+ F G D I+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 341 -----------------NNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
N + VF A NP +LLE +L D +R+T H +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 384 DNGP 387
+ P
Sbjct: 311 YHDP 314
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 18 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS----GL 239
NI+ + P +V ++ EG + + A K L DI G+
Sbjct: 68 VNILLFMGYSTKP---QLAIVTQWCEG---SSLYHHLHASETKFEMKKLIDIARQTARGM 121
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 122 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D ++V + PD
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G+G+YG V + + A+K + S + + RE+ ++K L+
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT-------YRELRLLKHLK 77
Query: 183 HPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
H N++ L++V S Y+V + +N Q A+ + + + ++ G
Sbjct: 78 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQFLVYQLLRG 135
Query: 239 LMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
L Y+H ++H D+KP N+ V ++I DF +++ +++ + T + APE
Sbjct: 136 LKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE---MTGYVATRWYRAPEIM 192
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
L + + D W+VG + ++ G+ F G D +I+
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 235
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V G A+K K L R E++
Sbjct: 92 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRA-----------EELM 137
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG + G + E A YL +
Sbjct: 138 ACAGLTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQAL 195
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGT-VKIGDFSVSQVFEDDNDVLRRS-------PG 288
GL YLH ++HGD+K DN+L++ G+ + DF + + D L +S PG
Sbjct: 196 EGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG--LGKSLLTGDYIPG 253
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
T APE LG + K D W+ + +M+ G +P+
Sbjct: 254 TETHMAPEVVLGRSCDAK-VDVWSSCCMMLHMLNGCHPW 291
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 28/271 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEY-------------VEGKWDNDGFGQPGAIGESMAR 229
H NIVNL+ + ++ EY E D + G+P + + +
Sbjct: 109 HENIVNLLGACT--HGGPVLVITEYCCYGDLLNFLRRKAEADLDKED-GRPLELRDLL-- 163
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPG 288
+ + G+ +L N +H D+ N+L+ KIGDF +++ + D N +++ +
Sbjct: 164 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 289 TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN--SL 344
PV + APE Y + +D W+ G+ L+ + +G P+ G + + K+V + +
Sbjct: 224 LPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 282
Query: 345 VFPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
P + ++++ +PT R T +
Sbjct: 283 AQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+K+GAG +G+V + + KH + ++ + P ++ E +MK LQH
Sbjct: 194 KKLGAGQFGEVWM---ATYNKH--------TKVAVKTMKPGSMSVEAFLAEANVMKTLQH 242
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLMY 241
+V L V+ + Y++ E++ D + + + + I G+ +
Sbjct: 243 DKLVKLHAVV---TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCLG 300
+ N +H D++ N+LV+ S KI DF +++V ED+ R P+ +TAPE
Sbjct: 300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 359
Query: 301 LTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
++ K +D W+ G+ L ++ G+ P+ G
Sbjct: 360 GSFTIK-SDVWSFGILLMEIVTYGRIPYPG 388
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 28/271 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 100
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEY-------------VEGKWDNDGFGQPGAIGESMAR 229
H NIVNL+ + ++ EY E D + G+P + + +
Sbjct: 101 HENIVNLLGACT--HGGPVLVITEYCCYGDLLNFLRRKAEADLDKED-GRPLELRDLL-- 155
Query: 230 KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPG 288
+ + G+ +L N +H D+ N+L+ KIGDF +++ + D N +++ +
Sbjct: 156 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 289 TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN--SL 344
PV + APE Y + +D W+ G+ L+ + +G P+ G + + K+V + +
Sbjct: 216 LPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 274
Query: 345 VFPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
P + ++++ +PT R T +
Sbjct: 275 AQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 28/260 (10%)
Query: 117 INEYVHVRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ E ++ IG G +G V+L YR G A+K ++ +A E
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDATAQAFLA-----------E 55
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYL 232
+M L+H N+V L+ VI + Y+V EY+ D G +G K+
Sbjct: 56 ASVMTQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
D+ + YL G+N VH D+ N+LV+ K+ DF +++ D + PV
Sbjct: 115 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK----LPVK 170
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE + K +D W+ G+ L+ + G+ P+ L+D ++ + PD
Sbjct: 171 WTAPEALREAAFSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 229
Query: 350 MNPELRNLLEGLLCKDPTRR 369
P + +++ D R
Sbjct: 230 CPPAVYEVMKNCWHLDAAMR 249
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
+IG G++G+V R D A+K+ ++ L+ +E I+K HP
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--------AKFLQEARILKQYSHP 172
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGLM 240
NIV LI V Y+V+E V+G D G + K L +V +G+
Sbjct: 173 NIVRLIGVCTQKQP--IYIVMELVQG---GDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG---TPV-FTAPE 296
YL +H D+ N LV +KI DF +S+ E+ + V S G PV +TAPE
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPE 285
Query: 297 CCLGLTYG--GKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS-LVFPDAMNP 352
L YG +D W+ G+ L+ +G P+ + Q T + + L P+
Sbjct: 286 ---ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD 342
Query: 353 ELRNLLEGLLCKDPTRRLTLNDV 375
+ L+E +P +R + + +
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 31/272 (11%)
Query: 117 INEYVHVRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ E ++ IG G +G V+L YR G A+K ++ +A E
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDATAQAFLA-----------E 64
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYL 232
+M L+H N+V L+ VI + Y+V EY+ D G +G K+
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
D+ + YL G+N VH D+ N+LV+ K+ DF +++ D + PV
Sbjct: 124 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK----LPVK 179
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE + K +D W+ G+ L+ + G+ P+ L+D ++ + PD
Sbjct: 180 WTAPEALREKKFSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 238
Query: 350 MNPELRNLLEGLLCKDPTRR---LTLNDVAKH 378
P + +++ D R L L + +H
Sbjct: 239 CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
+IG G++G+V R D A+K+ ++ L+ +E I+K HP
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--------AKFLQEARILKQYSHP 172
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGLM 240
NIV LI V Y+V+E V+G D G + K L +V +G+
Sbjct: 173 NIVRLIGVCTQKQP--IYIVMELVQG---GDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG---TPV-FTAPE 296
YL +H D+ N LV +KI DF +S+ E+ + V S G PV +TAPE
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPE 285
Query: 297 CCLGLTYG--GKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS-LVFPDAMNP 352
L YG +D W+ G+ L+ +G P+ + Q T + + L P+
Sbjct: 286 ---ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD 342
Query: 353 ELRNLLEGLLCKDPTRRLTLNDV 375
+ L+E +P +R + + +
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 28/260 (10%)
Query: 117 INEYVHVRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ E ++ IG G +G V+L YR G A+K ++ +A E
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDATAQAFLA-----------E 49
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYL 232
+M L+H N+V L+ VI + Y+V EY+ D G +G K+
Sbjct: 50 ASVMTQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
D+ + YL G+N VH D+ N+LV+ K+ DF +++ D + PV
Sbjct: 109 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK----LPVK 164
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE + K +D W+ G+ L+ + G+ P+ L+D ++ + PD
Sbjct: 165 WTAPEALREKKFSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 223
Query: 350 MNPELRNLLEGLLCKDPTRR 369
P + +++ D R
Sbjct: 224 CPPAVYEVMKNCWHLDAAMR 243
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + ++GAG+ G V + G A K H L + P+ + RE+ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH------LEIKPA--IRNQIIRELQV 67
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ P IV + + +E+++G + + I E + K ++
Sbjct: 68 LHECNSPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLR 125
Query: 238 GLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE 296
GL YL H ++H D+KP N+LV G +K+ DF VS D + GT + APE
Sbjct: 126 GLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTRSYMAPE 183
Query: 297 CCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
G Y + +D W++G++L + +G+YP
Sbjct: 184 RLQGTHYSVQ-SDIWSMGLSLVELAVGRYPI 213
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQGKAFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL 126
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 184
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN------- 341
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 342 ----------NSLVFPDA------------MNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
FP PE L LL PT RLT + H+
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 380 W 380
+
Sbjct: 305 F 305
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 54/260 (20%)
Query: 108 SEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETA 167
+ DE K ++ + R G G++G V L + G AIK
Sbjct: 13 AADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----------------KV 56
Query: 168 MTDVR---REVLIMK---MLQHPNIVNLIEVI-----DDPNSDHFYMVLEYVEG------ 210
+ D R RE+ IM+ +L HPNIV L D + +V+EYV
Sbjct: 57 IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCC 116
Query: 211 -KWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPS-GTVKIG 268
+ P + + + +R I G ++L NV H DIKP N+LV + GT+K+
Sbjct: 117 RNYYRRQVAPPPILIKVFLFQLIRSI--GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC 174
Query: 269 DFSVSQVFEDDNDVLRRSPGTP--------VFTAPECCLGLTYGGKAADTWAVGVTLYYM 320
DF ++ + SP P + APE G + A D W+VG M
Sbjct: 175 DFGSAK---------KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM 225
Query: 321 IIGQYPFLGETLQDTYDKIV 340
++G+ F G+ +IV
Sbjct: 226 MLGEPIFRGDNSAGQLHEIV 245
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLE-YVEGKWDNDGFGQPGAIGESMARKYL 232
E +IMK L HP+IV LI +I++ + ++++E Y G+ + ++ Y
Sbjct: 59 EAVIMKNLDHPHIVKLIGIIEEEPT---WIIMELYPYGELGHYLERNKNSLKVLTLVLYS 115
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
I + YL N VH DI N+LVA VK+GDF +S+ ED++ P+
Sbjct: 116 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN-NSLVFPDA 349
+ +PE + A+D W V ++ ++ G+ PF +D + + L PD
Sbjct: 176 WMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 234
Query: 350 MNPELRNLLEGLLCKDPTRR 369
P L L+ DP+ R
Sbjct: 235 CPPVLYTLMTRCWDYDPSDR 254
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
IN+ ++ ++G+G+ G+V R G A+K +S + ++ + D+ +
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE----ENKRILMDLD---V 76
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K P IV N+D F + +E + + G I E + K IV
Sbjct: 77 VLKSHDCPYIVQCFGTFIT-NTDVF-IAMELMGTCAEKLKKRMQGPIPERILGKMTVAIV 134
Query: 237 SGLMYL-HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAP 295
L YL H V+H D+KP N+L+ G +K+ DF +S DD RS G + AP
Sbjct: 135 KALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-AKDRSAGCAAYMAP 193
Query: 296 ECC-----LGLTYGGKAADTWAVGVTLYYMIIGQYPFLG-ETLQDTYDKIVNNS-LVFPD 348
E Y + AD W++G++L + GQ+P+ +T + K++ + P
Sbjct: 194 ERIDPPDPTKPDYDIR-ADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 349 AM--NPELRNLLEGLLCKDPTRRLTLNDVAKHTWV 381
M + + ++ ++ L KD +R N + +H+++
Sbjct: 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLE-YVEGKWDNDGFGQPGAIGESMARKYL 232
E +IMK L HP+IV LI +I++ + ++++E Y G+ + ++ Y
Sbjct: 63 EAVIMKNLDHPHIVKLIGIIEEEPT---WIIMELYPYGELGHYLERNKNSLKVLTLVLYS 119
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
I + YL N VH DI N+LVA VK+GDF +S+ ED++ P+
Sbjct: 120 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN-NSLVFPDA 349
+ +PE + A+D W V ++ ++ G+ PF +D + + L PD
Sbjct: 180 WMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 238
Query: 350 MNPELRNLLEGLLCKDPTRR 369
P L L+ DP+ R
Sbjct: 239 CPPVLYTLMTRCWDYDPSDR 258
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLE-YVEGKWDNDGFGQPGAIGESMARKYL 232
E +IMK L HP+IV LI +I++ + ++++E Y G+ + ++ Y
Sbjct: 75 EAVIMKNLDHPHIVKLIGIIEEEPT---WIIMELYPYGELGHYLERNKNSLKVLTLVLYS 131
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
I + YL N VH DI N+LVA VK+GDF +S+ ED++ P+
Sbjct: 132 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN-NSLVFPDA 349
+ +PE + A+D W V ++ ++ G+ PF +D + + L PD
Sbjct: 192 WMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 250
Query: 350 MNPELRNLLEGLLCKDPTRR 369
P L L+ DP+ R
Sbjct: 251 CPPVLYTLMTRCWDYDPSDR 270
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 22/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLI-------EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK----- 230
H NIVNL+ V+ + +L ++ K AI S A
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPGT 289
+ + G+ +L N +H D+ N+L+ KIGDF +++ + D N +++ +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN--SLV 345
PV + APE Y + +D W+ G+ L+ + +G P+ G + + K+V + +
Sbjct: 229 PVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 287
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
P + ++++ +PT R T +
Sbjct: 288 QPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 20/220 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E V+ +G+G++G V +G+ I K L A + E LI
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKI----LNETTGPKANVEFMDEALI 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMV------LEYVEGKWDNDGFGQPGAIGESMARKY 231
M + HP++V L+ V P + LEYV DN IG + +
Sbjct: 71 MASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--------IGSQLLLNW 122
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+MYL +VH D+ N+LV VKI DF ++++ E D G P
Sbjct: 123 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 182
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ C+ +D W+ GVT++ M G P+ G
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 30 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 79
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS----GL 239
NI+ + P +V ++ EG + + A K L DI G+
Sbjct: 80 VNILLFMGYSTKP---QLAIVTQWCEG---SSLYHHLHASETKFEMKKLIDIARQTARGM 133
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS--QVFEDDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ + + + G+ ++ APE
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D ++V + PD
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 246
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 20/228 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E V+ +G+G++G V +G+ I K L A + E LI
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKI----LNETTGPKANVEFMDEALI 93
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMV------LEYVEGKWDNDGFGQPGAIGESMARKY 231
M + HP++V L+ V P + LEYV DN IG + +
Sbjct: 94 MASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--------IGSQLLLNW 145
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+MYL +VH D+ N+LV VKI DF ++++ E D G P
Sbjct: 146 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 205
Query: 291 VFTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYD 337
+ C+ +D W+ GVT++ M G P+ G ++ D
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 253
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 30 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 79
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS----GL 239
NI+ + P +V ++ EG + + A K L DI G+
Sbjct: 80 VNILLFMGYSTAP---QLAIVTQWCEG---SSLYHHLHASETKFEMKKLIDIARQTARGM 133
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS--QVFEDDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ + + + G+ ++ APE
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D ++V + PD
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQGKAFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 184
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN------- 341
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 342 ----------NSLVFPDA------------MNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
FP PE L LL PT RLT + H+
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 380 W 380
+
Sbjct: 305 F 305
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 67
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY+++E++ D + + + I S +
Sbjct: 68 KHPNLVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-S 184
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 244
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 245 LMRACWQWNPSDRPSFAEI 263
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 184
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 380 W 380
+
Sbjct: 305 F 305
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 184
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 380 W 380
+
Sbjct: 305 F 305
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 41 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 85
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 86 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 145
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 203
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 56 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 100
Query: 178 MKMLQHPNIVNLIEVI--DDPNSDHFYM--VLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L D Y+ VL+YV A + +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 218
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338
Query: 380 W 380
+
Sbjct: 339 F 339
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 23 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 67
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 68 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 127
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 185
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 30 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 74
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 75 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 134
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 192
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 34 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 78
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 196
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 257 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 316
Query: 380 W 380
+
Sbjct: 317 F 317
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 34 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 78
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 196
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 257 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 316
Query: 380 W 380
+
Sbjct: 317 F 317
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQGKAFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 184
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 380 W 380
+
Sbjct: 305 F 305
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 26 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 70
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 130
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 188
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 248
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 249 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 308
Query: 380 W 380
+
Sbjct: 309 F 309
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXIC 184
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 380 W 380
+
Sbjct: 305 F 305
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 35 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 79
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 80 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 139
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 197
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 257
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 258 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 317
Query: 380 W 380
+
Sbjct: 318 F 318
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY+++E++ D + + + I S +
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 50 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 94
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 95 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 154
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 212
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 272
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 273 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 332
Query: 380 W 380
+
Sbjct: 333 F 333
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 56 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 100
Query: 178 MKMLQHPNIVNLIEVI--DDPNSDHFYM--VLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L D Y+ VL+YV A + +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 218
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338
Query: 380 W 380
+
Sbjct: 339 F 339
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 58 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 102
Query: 178 MKMLQHPNIVNLIEVI--DDPNSDHFYM--VLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L D Y+ VL+YV A + +
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 162
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 220
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 280
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 281 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 340
Query: 380 W 380
+
Sbjct: 341 F 341
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY+++E++ D + + + I S +
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 27 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 71
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 72 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 131
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 189
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 249
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 250 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 309
Query: 380 W 380
+
Sbjct: 310 F 310
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNLIEVI----DDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L + + + +VL+YV A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYIC 184
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 380 W 380
+
Sbjct: 305 F 305
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY+++E++ D + + + I S +
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 188
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 249 LMRACWQWNPSDRPSFAEI 267
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 101 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 145
Query: 178 MKMLQHPNIVNLIEVI--DDPNSDHFYM--VLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L D Y+ VL+YV A + +
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 263
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 323
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 324 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 383
Query: 380 W 380
+
Sbjct: 384 F 384
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 60 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 104
Query: 178 MKMLQHPNIVNLIEVI--DDPNSDHFYM--VLEYVEGKWDNDGFGQPGA---IGESMARK 230
M+ L H NIV L D Y+ VL+YV A + +
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 164
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDF-SVSQVFEDDNDVLRRSPG 288
Y+ + L Y+H + H DIKP NLL+ P + +K+ DF S Q+ + +V
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 222
Query: 289 TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNN------ 342
+ + APE G T + D W+ G L +++GQ F G++ D +I+
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 282
Query: 343 -----------------------SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+ VF PE L LL PT RLT + H+
Sbjct: 283 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 342
Query: 380 W 380
+
Sbjct: 343 F 343
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 41 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 90
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 91 VNILLFMGYSTKP---QLAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 144
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 145 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 204
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 257
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 22/270 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLI-------EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK----- 230
H NIVNL+ V+ + +L ++ K AI S
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPGT 289
+ + G+ +L N +H D+ N+L+ KIGDF +++ + D N +++ +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN--SLV 345
PV + APE Y + +D W+ G+ L+ + +G P+ G + + K+V + +
Sbjct: 229 PVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 287
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
P + ++++ +PT R T +
Sbjct: 288 QPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 42 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 91
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 92 VNILLFMGYSTKP---QLAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 258
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-S 188
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 249 LMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESM-ARKYLRDIVSGLMYLH 243
NI+ LI+ + DP S +V EY+ +N F Q I R Y+ +++ L Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYI----NNTDFKQLYQILTDFDIRFYMYELLKALDYCH 149
Query: 244 GHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV-ASRYFKGPELLVDYQ 208
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ D W++G L MI + PF QD YD++V
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPFFHG--QDNYDQLV 244
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 129
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 188
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 249 LMRACWQWNPSDRPSFAEI 267
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 16 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 65
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 66 VNILLFMGYSTKPQ---LAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 232
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 188
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 249 LMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESM-ARKYLRDIVSGLMYLH 243
NI+ LI+ + DP S +V EY+ +N F Q I R Y+ +++ L Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYI----NNTDFKQLYQILTDFDIRFYMYELLKALDYCH 154
Query: 244 GHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV-ASRYFKGPELLVDYQ 213
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIV 340
+ D W++G L MI + PF QD YD++V
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPFFHG--QDNYDQLV 249
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 19 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 69 VNILLFMGYSTKPQ---LAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 235
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 70
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 71 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 129 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 187
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 247
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 248 LMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 68
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----- 236
+HPN+V L+ V FY++ E++ +G R+ + +V
Sbjct: 69 KHPNLVQLLGVCT--REPPFYIITEFM-------TYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 237 ----SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
S + YL N +H D+ N LV + VK+ DF +S++ D P+
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE L +D WA GV L+ + G P+ G L Y+ + + + P+
Sbjct: 180 WTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDV 375
++ L+ +P+ R + ++
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----- 236
+HPN+V L+ V FY++ E++ +G R+ + +V
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFM-------TYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 237 ----SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
S + YL N +H D+ N LV + VK+ DF +S++ D P+
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE L +D WA GV L+ + G P+ G L Y+ + + + P+
Sbjct: 183 WTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDV 375
++ L+ +P+ R + ++
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 68
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----- 236
+HPN+V L+ V FY++ E++ +G R+ + +V
Sbjct: 69 KHPNLVQLLGVCT--REPPFYIITEFM-------TYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 237 ----SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
S + YL N +H D+ N LV + VK+ DF +S++ D P+
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE L +D WA GV L+ + G P+ G L Y+ + + + P+
Sbjct: 180 WTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDV 375
++ L+ +P+ R + ++
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 33/262 (12%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
+IG+GS+G V Y+ G A+K V P+ R EV +++ +H
Sbjct: 43 RIGSGSFGTV--YKGKWHGD-VAVKILKV-------VDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY-----LRDIVSGL 239
NI+ + + D+ +V ++ EG + + E+ + + R G+
Sbjct: 93 NILLFMGYM---TKDNLAIVTQWCEG----SSLYKHLHVQETKFQMFQLIDIARQTAQGM 145
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH N++H D+K +N+ + TVKIGDF ++ V + + + G+ ++ APE
Sbjct: 146 DYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 298 CLGLTYG--GKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPDAMNPELR 355
+D ++ G+ LY ++ G+ P+ + + D+I+ +V +P+L
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGELPY---SHINNRDQII--FMVGRGYASPDLS 260
Query: 356 NLLEGLLCKDPTRRLTLNDVAK 377
L + C +RL + V K
Sbjct: 261 KLYKN--CPKAMKRLVADCVKK 280
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 299 LGLTYGGKAADTWAVGVTLYYM-IIGQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 19 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 69 VNILLFMGYSTKP---QLAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 235
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 79
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----- 236
+HPN+V L+ V FY++ E++ +G R+ + +V
Sbjct: 80 KHPNLVQLLGVCT--REPPFYIITEFM-------TYGNLLDYLRECNRQEVNAVVLLYMA 130
Query: 237 ----SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
S + YL N +H D+ N LV + VK+ DF +S++ D P+
Sbjct: 131 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 190
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE L +D WA GV L+ + G P+ G L Y+ + + + P+
Sbjct: 191 WTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 249
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDV 375
++ L+ +P+ R + ++
Sbjct: 250 CPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 14 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 63
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 64 VNILLFMGYSTKPQ---LAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 14 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 63
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 64 VNILLFMGYSTAPQ---LAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE--DDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ V + + G+ ++ APE
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 230
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 125 KIGAGSYGKVV--LYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++G G++G V +YR AIK L+ + ++ RE IM L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKV--------LKQGTEKADTEEMMREAQIMHQLD 68
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG-KWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
+P IV LI V ++ +V+E G G+ I S + L + G+ Y
Sbjct: 69 NPYIVRLIGVC---QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKY 125
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF-EDDNDVLRRSPGT-PV-FTAPECC 298
L N VH D+ N+L+ KI DF +S+ DD+ RS G P+ + APEC
Sbjct: 126 LEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 299 LGLTYGGKAADTWAVGVTLYYMI-IGQYPF 327
+ + +D W+ GVT++ + GQ P+
Sbjct: 186 NFRKFSSR-SDVWSYGVTMWEALSYGQKPY 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 36/291 (12%)
Query: 124 RKIGAGSYGKVVLYRS-----SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
R++G G++GKV L D A+K + S+ A D RE ++
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---------SDNARKDFHREAELL 69
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------------GQPGAIG 224
LQH +IV V + D MV EY++ D + F P +
Sbjct: 70 TNLQHEHIVKFYGVCVE--GDPLIMVFEYMKHG-DLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 225 ESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVL 283
+S + I +G++YL + VH D+ N LV + VKIGDF +S+ V+ D +
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 284 RRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN 342
P+ P + +D W++GV L+ + G+ P+ + + + I
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 246
Query: 343 SLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLGDNGPIPQYL 392
++ P E+ L+ G ++P R + + HT + P YL
Sbjct: 247 RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNLAKASPVYL 295
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 110/282 (39%), Gaps = 46/282 (16%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ- 182
R + G + V + G+ YA+K + K R + +EV MK L
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA---------IIQEVCFMKKLSG 84
Query: 183 HPNIVNLIEVID------DPNSDHFYMVLEYVEGKWDN--DGFGQPGAIGESMARKYLRD 234
HPNIV D F ++ E +G+ G + K
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144
Query: 235 IVSGLMYLHGHN--VVHGDIKPDNLLVAPSGTVKIGDFSVSQVFED-------------- 278
+ ++H ++H D+K +NLL++ GT+K+ DF +
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 279 DNDVLRRSPGTPVFTAPECC-LGLTYG-GKAADTWAVGVTLYYMIIGQYPFL-GETLQDT 335
+ ++ R + TP++ PE L + G+ D WA+G LY + Q+PF G L
Sbjct: 205 EEEITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259
Query: 336 YDKIVNNSLVFP--DAMNPELRNLLEGLLCKDPTRRLTLNDV 375
+IVN P D +L+ +L +P RL++ +V
Sbjct: 260 --RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKA------FHKSHLSKLRVAPSETAMTDVRR 173
Y ++ IG GS+G+VV +H A+K FH+ ++R+ D
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL-EHLRKQDKDN 157
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
+ ++ ML++ N I + + S + Y +++ K GF P + RK+
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIK----KNKFQGFSLP------LVRKFAH 207
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT--VKIGDFSVSQVFEDDNDVLRRSPGTPV 291
I+ L LH + ++H D+KP+N+L+ G +K+ DF S +E + +
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR--VYTXIQSRF 264
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL 328
+ APE LG Y G D W++G L ++ G YP L
Sbjct: 265 YRAPEVILGARY-GMPIDMWSLGCILAELLTG-YPLL 299
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 35/281 (12%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 93
Query: 183 HPNIVNLI-------------------EVIDDPNSDHFYMVLEYVEGKWDNDGF----GQ 219
H NIVNL+ ++++ M+ + D +G G+
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 220 PGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFED 278
P + + + + + G+ +L N +H D+ N+L+ KIGDF +++ + D
Sbjct: 154 PLELRDLL--HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 279 DNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
N +++ + PV + APE Y + +D W+ G+ L+ + +G P+ G + +
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVNSKF 270
Query: 337 DKIVNN--SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
K+V + + P + ++++ +PT R T +
Sbjct: 271 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 67
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 68 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-S 184
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 244
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 245 LMRACWQWNPSDRPSFAEI 263
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 64
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY+++E++ D + + + I S +
Sbjct: 65 KHPNLVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-S 181
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G Y+ + + + P+ ++
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYE 241
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 242 LMRACWQWNPSDRPSFAEI 260
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 62/261 (23%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR---REVLIMKM 180
+ +G GS+G V GK +A+K + D R RE+ IMK+
Sbjct: 13 KTLGTGSFGIVCEVFDIESGKRFALKK----------------VLQDPRYKNRELDIMKV 56
Query: 181 LQHPNIVNLIE-----------------------------------VIDDPNSDHFY-MV 204
L H NI+ L++ VI +P+ + + ++
Sbjct: 57 LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 205 LEYVEGKWDN--DGFGQPG-AIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLV-A 260
+EYV F + G +I ++ Y+ + + ++H + H DIKP NLLV +
Sbjct: 117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 261 PSGTVKIGDF-SVSQVFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYY 319
T+K+ DF S ++ + V + + APE LG T + D W++G
Sbjct: 177 KDNTLKLCDFGSAKKLIPSEPSVAXIC--SRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234
Query: 320 MIIGQYPFLGETLQDTYDKIV 340
+I+G+ F GET D +I+
Sbjct: 235 LILGKPLFSGETSIDQLVRII 255
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKA------FHKSHLSKLRVAPSETAMTDVRR 173
Y ++ IG GS+G+VV +H A+K FH+ ++R+ D
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL-EHLRKQDKDN 157
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
+ ++ ML++ N I + + S + Y +++ K GF P + RK+
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIK----KNKFQGFSLP------LVRKFAH 207
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT--VKIGDFSVSQVFEDDNDVLRRSPGTPV 291
I+ L LH + ++H D+KP+N+L+ G +K+ DF S +E + +
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR--VYTXIQSRF 264
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL 328
+ APE LG Y G D W++G L ++ G YP L
Sbjct: 265 YRAPEVILGARY-GMPIDMWSLGCILAELLTG-YPLL 299
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 68
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 69 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-S 185
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G L Y+ + + + P+ ++
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 245
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 246 LMRACWQWNPSDRPSFAEI 264
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 30/275 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAIGE 225
H NIVNL+ + ++ EY +E + N +
Sbjct: 109 HENIVNLLGACT--HGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSY-NPSHNPEEQLSS 165
Query: 226 SMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLR 284
+ + G+ +L N +H D+ N+L+ KIGDF +++ + D N +++
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 285 RSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
+ PV + APE Y + +D W+ G+ L+ + +G P+ G + + K+V +
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 284
Query: 343 --SLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
+ P + ++++ +PT R T +
Sbjct: 285 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+E V++IG+G +G V L L+ AIK + +S+ D E +
Sbjct: 7 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSE----------EDFIEEAEV 55
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
M L HP +V L V + +V E++E +D Q G D+
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 113
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAP 295
G+ YL +V+H D+ N LV + +K+ DF +++ DD PV + +P
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMII-GQYPF 327
E Y K+ D W+ GV ++ + G+ P+
Sbjct: 174 EVFSFSRYSSKS-DVWSFGVLMWEVFSEGKIPY 205
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+L+ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+ ++G +GKV Y+ L G + AIK LR + R E
Sbjct: 31 MEELGEDRFGKV--YKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--------EEFRHEA 80
Query: 176 LIMKMLQHPNIVNLIEVI--DDPNSD----------HFYMVLEYVE---GKWDNDGFGQP 220
++ LQHPN+V L+ V+ D P S H ++V+ G D+D +
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK- 139
Query: 221 GAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDD 279
A+ + I +G+ YL H+VVH D+ N+LV VKI D + +V+ D
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 199
Query: 280 NDVLRRSPGTPV-FTAPECCLGLTYGGKA--ADTWAVGVTLYYMI-IGQYPFLGETLQDT 335
L + P+ + APE + YG + +D W+ GV L+ + G P+ G + QD
Sbjct: 200 YYKLLGNSLLPIRWMAPE---AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256
Query: 336 YDKIVNNSLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
+ I N ++ PD + L+ + P+RR D+
Sbjct: 257 VEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 36/217 (16%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG GSYG V L K+ AIK + R+ + RE+ I+ L+
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVN-------RMFEDLIDCKRILREITILNRLKSDY 88
Query: 186 IVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L ++I D D Y+VLE + F P + E + L +++ G ++
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV-------------------- 282
H ++H D+KP N L+ +VKI DF +++ D D+
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 283 -LRRSPGTPVFT----APECCLGLTYGGKAADTWAVG 314
L++ + V T APE L + D W+ G
Sbjct: 208 NLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTG 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+ ++G +GKV Y+ L G + AIK LR + R E
Sbjct: 14 MEELGEDRFGKV--YKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--------EEFRHEA 63
Query: 176 LIMKMLQHPNIVNLIEVI--DDPNSD----------HFYMVLEYVE---GKWDNDGFGQP 220
++ LQHPN+V L+ V+ D P S H ++V+ G D+D +
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK- 122
Query: 221 GAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV-SQVFEDD 279
A+ + I +G+ YL H+VVH D+ N+LV VKI D + +V+ D
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
Query: 280 NDVLRRSPGTPV-FTAPECCLGLTYGGKA--ADTWAVGVTLYYMI-IGQYPFLGETLQDT 335
L + P+ + APE + YG + +D W+ GV L+ + G P+ G + QD
Sbjct: 183 YYKLLGNSLLPIRWMAPE---AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
Query: 336 YDKIVNNSLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDV 375
+ I N ++ PD + L+ + P+RR D+
Sbjct: 240 VEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 34 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 83
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 84 VNILLFMGYSTKP---QLAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 137
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS--QVFEDDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ + + + G+ ++ APE
Sbjct: 138 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 197
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 250
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLRQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 312
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----- 236
+HPN+V L+ V FY++ E++ +G R+ + +V
Sbjct: 313 KHPNLVQLLGVCT--REPPFYIITEFMT-------YGNLLDYLRECNRQEVNAVVLLYMA 363
Query: 237 ----SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
S + YL N +H ++ N LV + VK+ DF +S++ D P+
Sbjct: 364 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 423
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE + K +D WA GV L+ + G P+ G L Y+ + + + P+
Sbjct: 424 WTAPESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 482
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDV 375
++ L+ +P+ R + ++
Sbjct: 483 CPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 270
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----- 236
+HPN+V L+ V FY++ E++ +G R+ + +V
Sbjct: 271 KHPNLVQLLGVCT--REPPFYIITEFMT-------YGNLLDYLRECNRQEVNAVVLLYMA 321
Query: 237 ----SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
S + YL N +H ++ N LV + VK+ DF +S++ D P+
Sbjct: 322 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 381
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE + K +D WA GV L+ + G P+ G L Y+ + + + P+
Sbjct: 382 WTAPESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 440
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDV 375
++ L+ +P+ R + ++
Sbjct: 441 CPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+E V++IG+G +G V L L+ AIK + +S+ D E +
Sbjct: 10 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSE----------EDFIEEAEV 58
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
M L HP +V L V + +V E++E +D Q G D+
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 116
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAP 295
G+ YL V+H D+ N LV + +K+ DF +++ DD PV + +P
Sbjct: 117 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 176
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMII-GQYPF 327
E Y K+ D W+ GV ++ + G+ P+
Sbjct: 177 EVFSFSRYSSKS-DVWSFGVLMWEVFSEGKIPY 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 42 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 91
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 92 VNILLFMGYSTKP---QLAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS--QVFEDDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ + + + G+ ++ APE
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+E V++IG+G +G V L L+ AIK + +S+ D E +
Sbjct: 5 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSE----------EDFIEEAEV 53
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
M L HP +V L V + +V E++E +D Q G D+
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 111
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAP 295
G+ YL V+H D+ N LV + +K+ DF +++ DD PV + +P
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 171
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMII-GQYPF 327
E Y K+ D W+ GV ++ + G+ P+
Sbjct: 172 EVFSFSRYSSKS-DVWSFGVLMWEVFSEGKIPY 203
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+E V++IG+G +G V L L+ AIK + +S+ D E +
Sbjct: 7 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSE----------EDFIEEAEV 55
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
M L HP +V L V + +V E++E +D Q G D+
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 113
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAP 295
G+ YL V+H D+ N LV + +K+ DF +++ DD PV + +P
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMII-GQYPF 327
E Y K+ D W+ GV ++ + G+ P+
Sbjct: 174 EVFSFSRYSSKS-DVWSFGVLMWEVFSEGKIPY 205
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 273
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----- 236
+HPN+V L+ V FY++ E++ +G R+ + +V
Sbjct: 274 KHPNLVQLLGVCT--REPPFYIITEFMT-------YGNLLDYLRECNRQEVSAVVLLYMA 324
Query: 237 ----SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV- 291
S + YL N +H ++ N LV + VK+ DF +S++ D P+
Sbjct: 325 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDA 349
+TAPE + K +D WA GV L+ + G P+ G L Y+ + + + P+
Sbjct: 385 WTAPESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443
Query: 350 MNPELRNLLEGLLCKDPTRRLTLNDV 375
++ L+ +P+ R + ++
Sbjct: 444 CPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 146
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 205
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 264 LDPRFNDILGRHSRKR 279
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 146
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 205
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 264 LDPRFNDILGRHSRKR 279
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y+ IG GSYG V L K+ AIK + R+ + RE+ I+
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN-------RMFEDLIDCKRILREITILN 80
Query: 180 MLQHPNIVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L+ I+ L ++I D D Y+VLE + F P + E + L +++
Sbjct: 81 RLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEEHIKTILYNLL 139
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV-------------- 282
G ++H ++H D+KP N L+ +VK+ DF +++ + D
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 283 ----LRRSPGTPVFT----APECCLGLTYGGKAADTWAVG 314
L++ + V T APE L K+ D W+ G
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG 239
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 28/285 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
N +VR IG G++G+V R+ + F + L+ S D +RE +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAP---GLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 178 MKMLQHPNIVNLIEV--IDDPNSDHF-YMVL----EYVEGKWDND-------------GF 217
M +PNIV L+ V + P F YM E++ +
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 218 GQPGAIGESMARKYL--RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ- 274
PG S A + R + +G+ YL VH D+ N LV + VKI DF +S+
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 275 VFEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
++ D + P+ P + +D WA GV L+ + G P+ G +
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283
Query: 334 DTYDKIVN-NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
+ + + N L P+ EL NL+ K P R + + +
Sbjct: 284 EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 145
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 146 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 204
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 263 LDPRFNDILGRHSRKR 278
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 265 LDPRFNDILGRHSRKR 280
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 152
Query: 243 HGHNVVHGDIKPDNLLV-APSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGL 301
H ++H D+KP N+++ +++ D+ +++ + + R + F PE +
Sbjct: 153 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 211
Query: 302 TYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLV--------FPDAMNPE 353
+ D W++G L MI + PF D YD++V + V + D N E
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVLGTEDLYDYIDKYNIE 269
Query: 354 LRNLLEGLLCKDPTRR 369
L +L + +R
Sbjct: 270 LDPRFNDILGRHSRKR 285
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +G G +GKVV ++ K A + K +PSE + D+ E ++K + H
Sbjct: 29 KTLGEGEFGKVV-KATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVNH 85
Query: 184 PNIVNLIEVI--DDPNSDHFYMVLEYV----------EGKWDNDGF------------GQ 219
P+++ L D P +++EY E + G+
Sbjct: 86 PHVIKLYGACSQDGP----LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 220 PGAIGESMAR--KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VF 276
P +M + I G+ YL ++VH D+ N+LVA +KI DF +S+ V+
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 277 EDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQD 334
E+D+ V R PV + A E Y + +D W+ GV L+ ++ +G P+ G +
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 335 TYDKI-VNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
++ + + + PD + E+ L+ ++P +R D++K
Sbjct: 261 LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
++IG+GS+G V Y+ G A+K + + AP+ + + EV +++ +H
Sbjct: 14 QRIGSGSFGTV--YKGKWHGD-VAVKMLNVT-------APTPQQLQAFKNEVGVLRKTRH 63
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV----SGL 239
NI+ + P +V ++ EG + + I L DI G+
Sbjct: 64 VNILLFMGYSTKPQ---LAIVTQWCEG---SSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS--QVFEDDNDVLRRSPGTPVFTAPEC 297
YLH +++H D+K +N+ + TVKIGDF ++ + + + G+ ++ APE
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 298 CLGLTYGGKA--ADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVFPD 348
+ +D +A G+ LY ++ GQ P+ +D +V + PD
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 230
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 64
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 65 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE-S 181
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G Y+ + + + P+ ++
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYE 241
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 242 LMRACWQWNPSDRPSFAEI 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+E V++IG+G +G V L L+ AIK + +S+ D E +
Sbjct: 8 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSE----------EDFIEEAEV 56
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
M L HP +V L V + +V E++E +D Q G D+
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAP--ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 114
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAP 295
G+ YL V+H D+ N LV + +K+ DF +++ DD PV + +P
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 174
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMII-GQYPF 327
E Y K+ D W+ GV ++ + G+ P+
Sbjct: 175 EVFSFSRYSSKS-DVWSFGVLMWEVFSEGKIPY 206
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+E V++IG+G +G V L L+ AIK + +S+ D E +
Sbjct: 27 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIKEGSMSE----------DDFIEEAEV 75
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
M L HP +V L V + +V E++E +D Q G D+
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 133
Query: 237 SGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAP 295
G+ YL V+H D+ N LV + +K+ DF +++ DD PV + +P
Sbjct: 134 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 193
Query: 296 ECCLGLTYGGKAADTWAVGVTLYYMII-GQYPF 327
E Y K+ D W+ GV ++ + G+ P+
Sbjct: 194 EVFSFSRYSSKS-DVWSFGVLMWEVFSEGKIPY 225
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKA------FHKSHLSKLRVAPSETAMTDVRR 173
Y ++ IG G +G+VV +H A+K FH+ ++R+ D
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL-EHLRKQDKDN 157
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
+ ++ ML++ N I + + S + Y +++ K GF P + RK+
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIK----KNKFQGFSLP------LVRKFAH 207
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT--VKIGDFSVSQVFEDDNDVLRRSPGTPV 291
I+ L LH + ++H D+KP+N+L+ G +K+ DF S +E + +
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR--VYXXIQSRF 264
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFL 328
+ APE LG Y G D W++G L ++ G YP L
Sbjct: 265 YRAPEVILGARY-GMPIDMWSLGCILAELLTG-YPLL 299
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 125 KIGAGSYGKVV--LYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++G G++G V +YR AIK L+ + ++ RE IM L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKV--------LKQGTEKADTEEMMREAQIMHQLD 394
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG-KWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
+P IV LI V ++ +V+E G G+ I S + L + G+ Y
Sbjct: 395 NPYIVRLIGVC---QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKY 451
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF-EDDNDVLRRSPGT-PV-FTAPECC 298
L N VH ++ N+L+ KI DF +S+ DD+ RS G P+ + APEC
Sbjct: 452 LEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 299 LGLTYGGKAADTWAVGVTLYYMI-IGQYPF 327
+ + +D W+ GVT++ + GQ P+
Sbjct: 512 NFRKFSSR-SDVWSYGVTMWEALSYGQKPY 540
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +G G +GKVV ++ K A + K +PSE + D+ E ++K + H
Sbjct: 29 KTLGEGEFGKVV-KATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVNH 85
Query: 184 PNIVNLIEVI--DDPNSDHFYMVLEYV----------EGKWDNDGF------------GQ 219
P+++ L D P +++EY E + G+
Sbjct: 86 PHVIKLYGACSQDGP----LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 220 PGAIGESMAR--KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VF 276
P +M + I G+ YL +VH D+ N+LVA +KI DF +S+ V+
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 277 EDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQD 334
E+D+ V R PV + A E Y + +D W+ GV L+ ++ +G P+ G +
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 335 TYDKI-VNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
++ + + + PD + E+ L+ ++P +R D++K
Sbjct: 261 LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 122/301 (40%), Gaps = 47/301 (15%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD 170
E ++ E+ + KIG+G +G V LDG YAIK SK +A S +
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGS-VDEQN 54
Query: 171 VRREVLIMKML-QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
REV +L QH ++V + DH + EY G D + I
Sbjct: 55 ALREVYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKE 112
Query: 230 KYLRDIV----SGLMYLHGHNVVHGDIKPDNLLVA----PSGTVKIGDFSVSQVFEDD-- 279
L+D++ GL Y+H ++VH DIKP N+ ++ P+ + GD EDD
Sbjct: 113 AELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD-------EDDWA 165
Query: 280 -NDVLRR-----------SP----GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIG 323
N V+ + SP G F A E AD +A+ +T+ G
Sbjct: 166 SNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAG 224
Query: 324 QYPFLGETLQDTYDKIVNNSLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
P D + +I L P ++ E LL+ ++ DP RR + + KH+ +L
Sbjct: 225 AEPLPRNG--DQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 282
Query: 383 G 383
Sbjct: 283 S 283
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 24/259 (9%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G +G+V V + SL A+K + + + + +E +MK +
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 64
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGL 239
+HPN+V L+ V FY++ E++ D + + + I S +
Sbjct: 65 KHPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECC 298
YL N +H D+ N LV + VK+ DF +S++ D P+ +TAPE
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-S 181
Query: 299 LGLTYGGKAADTWAVGVTLYYMII-GQYPFLGETLQDTYDKIVNN-SLVFPDAMNPELRN 356
L +D WA GV L+ + G P+ G Y+ + + + P+ ++
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYE 241
Query: 357 LLEGLLCKDPTRRLTLNDV 375
L+ +P+ R + ++
Sbjct: 242 LMRACWQWNPSDRPSFAEI 260
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 40/285 (14%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ +G G +GKVV + L G+ + + L+ S + + D+ E ++K +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGR----AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEYV----------EGKWDNDGF------------G 218
HP+++ L D P +++EY E + G+
Sbjct: 85 HPHVIKLYGACSQDGP----LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 219 QPGAIGESMAR--KYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-V 275
P +M + I G+ YL +VH D+ N+LVA +KI DF +S+ V
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 276 FEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+E+D+ V R PV + A E Y + +D W+ GV L+ ++ +G P+ G +
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 334 DTYDKI-VNNSLVFPDAMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
++ + + + PD + E+ L+ ++P +R D++K
Sbjct: 260 RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 121/298 (40%), Gaps = 47/298 (15%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
++ E+ + KIG+G +G V LDG YAIK SK +A S + R
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGS-VDEQNALR 55
Query: 174 EVLIMKML-QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
EV +L QH ++V + DH + EY G D + I L
Sbjct: 56 EVYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 233 RDIV----SGLMYLHGHNVVHGDIKPDNLLVA----PSGTVKIGDFSVSQVFEDD---ND 281
+D++ GL Y+H ++VH DIKP N+ ++ P+ + GD EDD N
Sbjct: 114 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD-------EDDWASNK 166
Query: 282 VLRR-----------SP----GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYP 326
V+ + SP G F A E AD +A+ +T+ G P
Sbjct: 167 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEP 225
Query: 327 FLGETLQDTYDKIVNNSLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
D + +I L P ++ E LL+ ++ DP RR + + KH+ +L
Sbjct: 226 LPRNG--DQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 281
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 126 IGAGSYGKVVLYRSSLDG----------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IG G++G+V+ R DG K YA K H+ +L V
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-------------- 78
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV-EGKW-----------DNDGFGQPGAI 223
+ K+ HPNI+NL+ + + + Y+ +EY G + F +
Sbjct: 79 -LCKLGHHPNIINLLGACE--HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 135
Query: 224 GESMARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDD 279
+++ + L D+ G+ YL +H D+ N+LV + KI DF +S+ E
Sbjct: 136 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-- 193
Query: 280 NDVLRRSPG-TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYD 337
++++ G PV L + +D W+ GV L+ ++ +G P+ G T + Y+
Sbjct: 194 -VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 252
Query: 338 KI 339
K+
Sbjct: 253 KL 254
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 118/296 (39%), Gaps = 45/296 (15%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
++ E+ + KIG+G +G V LDG YAIK SK +A S +R
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGSVDEQNALRE 60
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
+ QH ++V + DH + EY G D + I L+
Sbjct: 61 VYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 118
Query: 234 DIV----SGLMYLHGHNVVHGDIKPDNLLVA----PSGTVKIGDFSVSQVFEDD---NDV 282
D++ GL Y+H ++VH DIKP N+ ++ P+ + GD EDD N V
Sbjct: 119 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD-------EDDWASNKV 171
Query: 283 LRR-----------SP----GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
+ + SP G F A E AD +A+ +T+ G P
Sbjct: 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL 230
Query: 328 LGETLQDTYDKIVNNSLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVL 382
D + +I L P ++ E LL+ ++ DP RR + + KH+ +L
Sbjct: 231 PRNG--DQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 126 IGAGSYGKVVLYRSSLDG----------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IG G++G+V+ R DG K YA K H+ +L V
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-------------- 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV-EGKW-----------DNDGFGQPGAI 223
+ K+ HPNI+NL+ + + + Y+ +EY G + F +
Sbjct: 69 -LCKLGHHPNIINLLGACE--HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 125
Query: 224 GESMARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDD 279
+++ + L D+ G+ YL +H D+ N+LV + KI DF +S+ E
Sbjct: 126 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-- 183
Query: 280 NDVLRRSPG-TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYD 337
++++ G PV L + +D W+ GV L+ ++ +G P+ G T + Y+
Sbjct: 184 -VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 242
Query: 338 KI 339
K+
Sbjct: 243 KL 244
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 45/297 (15%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
++ E+ + KIG+G +G V LDG YAIK SK +A S +R
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGSVDEQNALRE 58
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
+ QH ++V + DH + EY G D + I L+
Sbjct: 59 VYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 234 DIV----SGLMYLHGHNVVHGDIKPDNLLVA----PSGTVKIGDFSVSQVFEDD---NDV 282
D++ GL Y+H ++VH DIKP N+ ++ P+ + GD EDD N V
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD-------EDDWASNKV 169
Query: 283 LRR-----------SP----GTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
+ + SP G F A E AD +A+ +T+ G P
Sbjct: 170 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL 228
Query: 328 LGETLQDTYDKIVNNSLV-FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTWVLG 383
D + +I L P ++ E LL+ ++ DP RR + + KH+ +L
Sbjct: 229 PRNG--DQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 283
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 35/264 (13%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++G V+ ++ K AIK SE+ E+ + + HPN
Sbjct: 16 VGRGAFG--VVCKAKWRAKDVAIKQIE-----------SESERKAFIVELRQLSRVNHPN 62
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGK--WDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
IV L +P +V+EY EG ++ +P + A + G+ YL
Sbjct: 63 IVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 243 HGHN---VVHGDIKPDNLLVAPSGTV-KIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
H ++H D+KP NLL+ GTV KI DF + D + + G+ + APE
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNNKGSAAWMAPEVF 175
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPF---LGETLQDTYDKIVNNSLVFPDAMN--PE 353
G Y K D ++ G+ L+ +I + PF G + + V+N P N
Sbjct: 176 EGSNYSEK-CDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AVHNGTRPPLIKNLPKP 232
Query: 354 LRNLLEGLLCKDPTRRLTLNDVAK 377
+ +L+ KDP++R ++ ++ K
Sbjct: 233 IESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
E ++++G+G +G V L ++ D A+K + +S+ + +E
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYD---VAVKMIKEGSMSE----------DEFFQEA 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRD 234
M L HP +V V Y+V EY+ G N + S + D
Sbjct: 55 QTMMKLSHPKLVKFYGVCSKEYP--IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYD 112
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FT 293
+ G+ +L H +H D+ N LV VK+ DF +++ DD V PV ++
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS 172
Query: 294 APECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPF 327
APE Y K +D WA G+ ++ + +G+ P+
Sbjct: 173 APEVFHYFKYSSK-SDVWAFGILMWEVFSLGKMPY 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 35/264 (13%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++G V+ ++ K AIK SE+ E+ + + HPN
Sbjct: 17 VGRGAFG--VVCKAKWRAKDVAIKQIE-----------SESERKAFIVELRQLSRVNHPN 63
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGK--WDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
IV L +P +V+EY EG ++ +P + A + G+ YL
Sbjct: 64 IVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 243 HGHN---VVHGDIKPDNLLVAPSGTV-KIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECC 298
H ++H D+KP NLL+ GTV KI DF + D + + G+ + APE
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNNKGSAAWMAPEVF 176
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIGQYPF---LGETLQDTYDKIVNNSLVFPDAMN--PE 353
G Y K D ++ G+ L+ +I + PF G + + V+N P N
Sbjct: 177 EGSNYSEK-CDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AVHNGTRPPLIKNLPKP 233
Query: 354 LRNLLEGLLCKDPTRRLTLNDVAK 377
+ +L+ KDP++R ++ ++ K
Sbjct: 234 IESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 17 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 71 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFE-DDNDVLRRSPGT-PV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D+N ++ G PV + APEC
Sbjct: 128 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 188 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 23 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 76
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 77 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 133
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + PV + APEC
Sbjct: 134 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 194 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 223
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF--HKSHLSKLRVAPSETAM 168
+NG K ++ Y IG GS+G+VV ++ + AIK K+ L++ ++ +
Sbjct: 28 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLEL 87
Query: 169 T---DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGE 225
D + I+ + +H N + ++ + S + Y +L N F +
Sbjct: 88 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLR-------NTNF---RGVSL 137
Query: 226 SMARKYLRDIVSGLMYLHGH--NVVHGDIKPDNLLVA--PSGTVKIGDFSVSQVFEDDND 281
++ RK+ + + + L++L +++H D+KP+N+L+ +KI DF S
Sbjct: 138 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQ 194
Query: 282 VLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
+ + + + +PE LG+ Y A D W++G L M G+ F G D +KIV
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPY-DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV- 252
Query: 342 NSLVFPDA----MNPELRNLLEGL 361
L P A P+ R E L
Sbjct: 253 EVLGIPPAHILDQAPKARKFFEKL 276
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 13 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 66
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 67 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 123
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + PV + APEC
Sbjct: 124 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 184 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 213
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 17 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 71 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + PV + APEC
Sbjct: 128 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 188 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 11 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 64
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 65 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 121
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + PV + APEC
Sbjct: 122 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 182 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 33 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 86
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 87 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + PV + APEC
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 204 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 33 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 86
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 87 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + PV + APEC
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 204 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 31 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 84
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 85 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 141
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSP--GTPV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + PV + APEC
Sbjct: 142 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 202 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 231
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF--HKSHLSKLRVAPSETAM 168
+NG K ++ Y IG GS+G+VV ++ + AIK K+ L++ ++ +
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLEL 106
Query: 169 T---DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGE 225
D + I+ + +H N + ++ + S + Y +L N F +
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLR-------NTNF---RGVSL 156
Query: 226 SMARKYLRDIVSGLMYLHGH--NVVHGDIKPDNLLVA--PSGTVKIGDFSVSQVFEDDND 281
++ RK+ + + + L++L +++H D+KP+N+L+ +KI DF S
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQ 213
Query: 282 VLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
+ + + + +PE LG+ Y A D W++G L M G+ F G D +KIV
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPY-DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV- 271
Query: 342 NSLVFPDA----MNPELRNLLEGL 361
L P A P+ R E L
Sbjct: 272 EVLGIPPAHILDQAPKARKFFEKL 295
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 126 IGAGSYGKVVLYRSSLDG----------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IG G++G+V+ R DG K YA K H+ +L V
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-------------- 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV-EGKW-----------DNDGFGQPGAI 223
+ K+ HPNI+NL+ + + + Y+ +EY G + F +
Sbjct: 76 -LCKLGHHPNIINLLGACE--HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 132
Query: 224 GESMARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDD 279
+++ + L D+ G+ YL +H ++ N+LV + KI DF +S+ E
Sbjct: 133 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQE-- 190
Query: 280 NDVLRRSPG-TPVFTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYD 337
++++ G PV L + +D W+ GV L+ ++ +G P+ G T + Y+
Sbjct: 191 -VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 249
Query: 338 KI 339
K+
Sbjct: 250 KL 251
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF--HKSHLSKLRVAPSETAM 168
+NG K ++ Y IG GS+G+VV ++ + AIK K+ L++ ++ +
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLEL 106
Query: 169 T---DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGE 225
D + I+ + +H N + ++ + S + Y +L N F +
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLR-------NTNF---RGVSL 156
Query: 226 SMARKYLRDIVSGLMYLHGH--NVVHGDIKPDNLLVA--PSGTVKIGDFSVSQVFEDDND 281
++ RK+ + + + L++L +++H D+KP+N+L+ +KI DF S
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL---GQ 213
Query: 282 VLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVN 341
+ + + + +PE LG+ Y A D W++G L M G+ F G D +KIV
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPY-DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV- 271
Query: 342 NSLVFPDA----MNPELRNLLEGL 361
L P A P+ R E L
Sbjct: 272 EVLGIPPAHILDQAPKARKFFEKL 295
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 112/282 (39%), Gaps = 24/282 (8%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V + L + + L +A S+ + + RE MK H
Sbjct: 29 RMLGKGEFGSV--REAQLKQEDGSFVKVAVKMLKADIIASSD--IEEFLREAACMKEFDH 84
Query: 184 PNIVNLIEVIDDPNSD---HFYMVLEYVEGKWDNDGFGQPGAIGES-------MARKYLR 233
P++ L+ V + MV+ D F IGE+ +++
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS-QVFEDDNDVLRRSPGTPVF 292
DI G+ YL N +H D+ N ++A TV + DF +S +++ D + PV
Sbjct: 145 DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK 204
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYDKIV-NNSLVFPDAM 350
L +D WA GVT++ M GQ P+ G + Y+ ++ N L P
Sbjct: 205 WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPEC 264
Query: 351 NPELRNLLEGLLCKDPTR-------RLTLNDVAKHTWVLGDN 385
E+ +L+ DP + R+ L ++ H VL +
Sbjct: 265 MEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 375 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 428
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 429 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 485
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPGT-PV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + ++ G PV + APEC
Sbjct: 486 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 546 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 183 HPNIV---NLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
HP+IV N +E D Y+V+EYV G+ GQ + E++A YL +I+ L
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPAL 195
Query: 240 MYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCL 299
YLH +V+ D+KP+N+++ I +VS++ + GTP F APE
Sbjct: 196 SYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRI-----NSFGYLYGTPGFQAPEIV- 249
Query: 300 GLTYGGKAADTWAVGVTLYYMII 322
T A D + VG TL + +
Sbjct: 250 -RTGPTVATDIYTVGRTLAALTL 271
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD-VRREVLIMKMLQ 182
+++G+G++G V G + K + L+ ++ A+ D + E +M+ L
Sbjct: 376 KELGSGNFGTVK------KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 429
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+P IV +I + + ++ + +V+E E N Q + + + + + G+ YL
Sbjct: 430 NPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 486
Query: 243 HGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR-RSPGT-PV-FTAPECCL 299
N VH D+ N+L+ KI DF +S+ D + + ++ G PV + APEC
Sbjct: 487 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 300 GLTYGGKAADTWAVGVTLYYMI-IGQYPFLG 329
+ K +D W+ GV ++ GQ P+ G
Sbjct: 547 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
K+G G +G V+Y+ ++ A+K L+ + +E +E+ +M QH
Sbjct: 38 KMGEGGFG--VVYKGYVNNTTVAVKK-----LAAMVDITTEELKQQFDQEIKVMAKCQHE 90
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF----GQPGAIGESMARKYLRDIVSGLM 240
N+V L+ D D +V Y+ D G P + M K + +G+
Sbjct: 91 NLVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGIN 147
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFED--DNDVLRRSPGTPVFTAPECC 298
+LH ++ +H DIK N+L+ + T KI DF +++ E + R GT + APE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIG 323
G +D ++ GV L +I G
Sbjct: 208 RGEI--TPKSDIYSFGVVLLEIITG 230
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 204 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 209 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMR 267
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
K+G G +G V+Y+ ++ A+K L+ + +E +E+ +M QH
Sbjct: 38 KMGEGGFG--VVYKGYVNNTTVAVKK-----LAAMVDITTEELKQQFDQEIKVMAKCQHE 90
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF----GQPGAIGESMARKYLRDIVSGLM 240
N+V L+ D D +V Y+ D G P + M K + +G+
Sbjct: 91 NLVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGIN 147
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFED--DNDVLRRSPGTPVFTAPECC 298
+LH ++ +H DIK N+L+ + T KI DF +++ E + R GT + APE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIG 323
G +D ++ GV L +I G
Sbjct: 208 RGEI--TPKSDIYSFGVVLLEIITG 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 204 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 39/275 (14%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y+ ++K+G G + V L DG YA+K + + + +RE + +
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI---------LCHEQQDREEAQREADMHR 81
Query: 180 MLQHPNIVNLIE-VIDDPNSDH-FYMVLEY---------VEGKWDNDGFGQPGAIGESMA 228
+ HPNI+ L+ + + + H +++L + +E D F + E
Sbjct: 82 LFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-----LTEDQI 136
Query: 229 RKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDF-SVSQV---FEDDNDVLR 284
L I GL +H H D+KP N+L+ G + D S++Q E L
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT 196
Query: 285 RSPG-----TPVFTAPECCLGLTYG--GKAADTWAVGVTLYYMIIGQYPF-LGETLQDTY 336
T + APE ++ + D W++G LY M+ G+ P+ + D+
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256
Query: 337 DKIVNNSLVFPDA--MNPELRNLLEGLLCKDPTRR 369
V N L P + + L LL ++ DP +R
Sbjct: 257 ALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 213 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 213 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 256 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 314
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 315 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 129/311 (41%), Gaps = 50/311 (16%)
Query: 99 VKESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSK 158
++ S KL S +++ + + +IG G+YG V G+ A+K +
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVK--------R 54
Query: 159 LRVAPSETAMTDVRREV-LIMKMLQHPNIVNL-------------IEVIDDPNSDHFYMV 204
+R E + ++ ++M+ P IV +E++ + D FY
Sbjct: 55 IRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFY-- 111
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH-NVVHGDIKPDNLLVAPSG 263
+YV D+ I E + K V L +L + ++H DIKP N+L+ SG
Sbjct: 112 -KYVYSVLDD-------VIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG 163
Query: 264 TVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPE----CCLGLTYGGKAADTWAVGVTLYY 319
+K+ DF +S D+ R G + APE Y + +D W++G+TLY
Sbjct: 164 NIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSASRQGYDVR-SDVWSLGITLYE 221
Query: 320 MIIGQYPFLGETLQDTYDKIVNNSLVFPDAM--------NPELRNLLEGLLCKDPTRRLT 371
+ G++P+ +D++ P + +P N + L KD ++R
Sbjct: 222 LATGRFPY--PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPK 279
Query: 372 LNDVAKHTWVL 382
++ KH ++L
Sbjct: 280 YKELLKHPFIL 290
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 263 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 321
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 322 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 204 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 204 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 258 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 316
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 213 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 265 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 323
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 324 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
K+G G +G V+Y+ ++ A+K L+ + +E +E+ +M QH
Sbjct: 32 KMGEGGFG--VVYKGYVNNTTVAVKK-----LAAMVDITTEELKQQFDQEIKVMAKCQHE 84
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF----GQPGAIGESMARKYLRDIVSGLM 240
N+V L+ D D +V Y+ D G P + M K + +G+
Sbjct: 85 NLVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGIN 141
Query: 241 YLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFED--DNDVLRRSPGTPVFTAPECC 298
+LH ++ +H DIK N+L+ + T KI DF +++ E + R GT + APE
Sbjct: 142 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 299 LGLTYGGKAADTWAVGVTLYYMIIG 323
G +D ++ GV L +I G
Sbjct: 202 RGEI--TPKSDIYSFGVVLLEIITG 224
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 215 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 273
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 274 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 213 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGT 264
L VE + D+DGF + E + Y + G+ +L +H D+ N+L++ +
Sbjct: 179 LSDVEEEEDSDGFYKEPITMEDLI-SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNV 237
Query: 265 VKIGDFSVSQVFEDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI- 321
VKI DF +++ + D +R+ P+ + APE Y K +D W+ GV L+ +
Sbjct: 238 VKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK-SDVWSYGVLLWEIFS 296
Query: 322 IGQYPFLGETLQDTYDKIVNNSLVF--PDAMNPELRNLLEGLLCKDPTRRLTLNDVAKHT 379
+G P+ G + + + + + P+ PE+ ++ +DP R ++ +
Sbjct: 297 LGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEK- 355
Query: 380 WVLGD 384
LGD
Sbjct: 356 --LGD 358
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 36 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 93 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF ++Q D+ R S
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ------DIYRASYYRKG 203
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 263 GRMDPPKNCP 272
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 163
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 222
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNAYL 273
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 213 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 250 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 308
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 231 YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-T 289
Y + G+ +L +H D+ N+L++ VKI DF +++ D D +R+
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LV 345
P+ + APE Y + +D W+ GV L+ + +G P+ G + + + + + +
Sbjct: 209 PLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 267
Query: 346 FPDAMNPELRNLLEGLLCKDPTRRLTLNDVAKH 378
PD PE+ + +P++R T +++ +H
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 73
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 125
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 126 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 186 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 30/231 (12%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSD-----------------HFYMVLE 206
S+ + + E MK HPN++ L+ V + +S H Y++
Sbjct: 76 SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS 135
Query: 207 YVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVK 266
+E P I K++ DI G+ YL N +H D+ N ++ TV
Sbjct: 136 RLETG--------PKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVC 187
Query: 267 IGDFSVS-QVFEDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMII-G 323
+ DF +S +++ D R PV + A E Y K +D WA GVT++ + G
Sbjct: 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSK-SDVWAFGVTMWEIATRG 246
Query: 324 QYPFLGETLQDTYDKIVN-NSLVFPDAMNPELRNLLEGLLCKDPTRRLTLN 373
P+ G + YD +++ + L P+ EL ++ DP R T +
Sbjct: 247 MTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 202
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 253
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 124
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 125 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 185 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 80
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 132
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 133 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 193 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 232
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 122
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 183 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPGTPV- 291
+ G+ +L N +H D+ N+L+ KI DF +++ + D N V++ + PV
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 230
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LVFPD 348
+ APE Y + +D W+ G+ L+ + +G P+ G + + K++ ++ P+
Sbjct: 231 WMAPESIFNCVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
E+ ++++ DP +R T + +
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPGTPV- 291
+ G+ +L N +H D+ N+L+ KI DF +++ + D N V++ + PV
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 228
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LVFPD 348
+ APE Y + +D W+ G+ L+ + +G P+ G + + K++ ++ P+
Sbjct: 229 WMAPESIFNCVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
E+ ++++ DP +R T + +
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+ L
Sbjct: 36 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLN 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 93 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 203
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 263 GRMDPPKNCP 272
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 144
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 203
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 73
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 125
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 126 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 186 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPGTPV- 291
+ G+ +L N +H D+ N+L+ KI DF +++ + D N V++ + PV
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK 235
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LVFPD 348
+ APE Y + +D W+ G+ L+ + +G P+ G + + K++ ++ P+
Sbjct: 236 WMAPESIFNCVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
E+ ++++ DP +R T + +
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 71
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDN--------IGSQYLLNW 123
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 124 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 184 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 95
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 147
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 148 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 208 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 247
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 77
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 129
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 130 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 190 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDN--------IGSQYLLNW 122
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 183 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 122
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 183 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 124
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 125 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 185 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 201
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 252
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 126
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 127 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 187 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPGTPV- 291
+ G+ +L N +H D+ N+L+ KI DF +++ + D N V++ + PV
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 235
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LVFPD 348
+ APE Y + +D W+ G+ L+ + +G P+ G + + K++ ++ P+
Sbjct: 236 WMAPESIFNCVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
E+ ++++ DP +R T + +
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 73
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 125
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 126 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 186 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 202
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 253
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 73
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 125
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 126 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 186 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 116/287 (40%), Gaps = 45/287 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 67
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 119
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 120 CVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPF-------------LGETLQ-- 333
+ + A E L Y + +D W+ GVT++ M G P+ GE L
Sbjct: 180 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 238
Query: 334 -----DTYDKIVNNSLVFPDAMNPELRNLLEGL--LCKDPTRRLTLN 373
D Y +V ++ D+ P+ R L+ + +DP R L +
Sbjct: 239 PICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMARDPQRYLVIQ 284
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 201
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 122
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 183 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 222 AIGESMARKYLRDIVSGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDD- 279
I E + K IV L +LH +V+H D+KP N+L+ G VK+ DF +S DD
Sbjct: 105 TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164
Query: 280 -NDVLRRSPGTPVFTAPECC---LGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQ 333
D+ G + APE L +D W++G+T+ + I ++P+ G Q
Sbjct: 165 AKDI---DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 221
Query: 334 DTYDKIVNNSLVFP-DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
+ S P D + E + L K+ R T ++ +H +
Sbjct: 222 QLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+ L
Sbjct: 50 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLN 106
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 107 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 217
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 277 GRMDPPKNCP 286
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 71
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 123
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 124 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 184 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 128
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 129 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 189 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 228
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 234 DIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VFEDDNDVLRRSPGTPV- 291
+ G+ +L N +H D+ N+L+ KI DF +++ + D N V++ + PV
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 212
Query: 292 FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNNS--LVFPD 348
+ APE Y + +D W+ G+ L+ + +G P+ G + + K++ ++ P+
Sbjct: 213 WMAPESIFNCVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 349 AMNPELRNLLEGLLCKDPTRRLTLNDVAK 377
E+ ++++ DP +R T + +
Sbjct: 272 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 201
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 252
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 116/287 (40%), Gaps = 45/287 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 64
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 116
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 117 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPF-------------LGETLQ-- 333
+ + A E L Y + +D W+ GVT++ M G P+ GE L
Sbjct: 177 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Query: 334 -----DTYDKIVNNSLVFPDAMNPELRNLLEGL--LCKDPTRRLTLN 373
D Y +V ++ D+ P+ R L+ + +DP R L +
Sbjct: 236 PICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMARDPQRYLVIQ 281
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G++G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 100 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE---- 151
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 152 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 266
Query: 334 DTY 336
+ +
Sbjct: 267 ELF 269
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 201
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 252
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 201
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 252
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNIV L++++ D +S ++ EYV + D + + R Y+ +++ L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 244 GHNVVHGDIKPDNLLVAPS-GTVKIGDFSVSQVFEDDNDVLRRSPGTPVFTAPECCLGLT 302
++H D+KP N+++ +++ D+ +++ + + R + F PE + L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDLQ 201
Query: 303 YGGKAADTWAVGVTLYYMIIGQYPFLGETLQDTYDKIVNNSLVF-PDAMNPEL 354
+ D W++G MI + PF D +D++V + V D +N L
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYG--HDNHDQLVKIAKVLGTDGLNVYL 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+D+ + YL +H D+ N LV G VK+ DF +S+ DD R PV
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN 341
+P L + +D WA GV ++ + +G+ P+ T +T + I
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIMELREATSPKANKEILDEAYV 104
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 156
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 157 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 217 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 256
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+K+GAG +G+V + + KH + ++ + P ++ E +MK LQH
Sbjct: 188 KKLGAGQFGEVWM---ATYNKH--------TKVAVKTMKPGSMSVEAFLAEANVMKTLQH 236
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR--KYLRDIVSGLMY 241
+V L V+ + Y++ E++ D + + + + I G+ +
Sbjct: 237 DKLVKLHAVV---TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 242 LHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPV-FTAPECCLG 300
+ N +H D++ N+LV+ S KI DF +++V P+ +TAPE
Sbjct: 294 IEQRNYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINF 343
Query: 301 LTYGGKAADTWAVGVTLYYMII-GQYPFLG 329
++ K +D W+ G+ L ++ G+ P+ G
Sbjct: 344 GSFTIK-SDVWSFGILLMEIVTYGRIPYPG 372
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G++G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 100 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 151
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 152 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 266
Query: 334 DTY 336
+ +
Sbjct: 267 ELF 269
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
S A+TD +L + L H +IV L+ + P S +V +Y+ G + GA
Sbjct: 58 SFQAVTD---HMLAIGSLDHAHIVRLLGLC--PGSS-LQLVTQYLPLGSLLDHVRQHRGA 111
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF-EDDND 281
+G + + I G+ YL H +VH ++ N+L+ V++ DF V+ + DD
Sbjct: 112 LGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 282 VLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYD 337
+L TP+ + +D W+ GVT++ M G P+ G L + D
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD 228
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G++G+VVL + K + K + L+ +E ++D+ E+ +MKM+ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRV-TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDND------------GFGQPGAIGESMA 228
H NI+NL+ D P Y+++EY + F E ++
Sbjct: 93 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 229 RKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLR 284
K L + G+ YL +H D+ N+LV +KI DF +++ + +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 285 RSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGA 222
S A+TD +L + L H +IV L+ + P S +V +Y+ G + GA
Sbjct: 76 SFQAVTD---HMLAIGSLDHAHIVRLLGLC--PGSS-LQLVTQYLPLGSLLDHVRQHRGA 129
Query: 223 IGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF-EDDND 281
+G + + I G+ YL H +VH ++ N+L+ V++ DF V+ + DD
Sbjct: 130 LGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 282 VLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLGETLQDTYD 337
+L TP+ + +D W+ GVT++ M G P+ G L + D
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD 246
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 124
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF +++ + G P
Sbjct: 125 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 185 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 224
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 45/287 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 124
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF +++ + G P
Sbjct: 125 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPF-------------LGETLQ-- 333
+ + A E L Y + +D W+ GVT++ M G P+ GE L
Sbjct: 185 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243
Query: 334 -----DTYDKIVNNSLVFPDAMNPELRNLLEGL--LCKDPTRRLTLN 373
D Y +V ++ D+ P+ R L+ + +DP R L +
Sbjct: 244 PICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMARDPQRYLVIQ 289
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 52 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 108
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 109 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 166 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 219
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 220 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 278
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 279 GRMDPPKNCP 288
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 124
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF +++ + G P
Sbjct: 125 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 185 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 224
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 36 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 93 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 203
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 263 GRMDPPKNCP 272
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 45/287 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 77
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 129
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF +++ + G P
Sbjct: 130 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPF-------------LGETLQ-- 333
+ + A E L Y + +D W+ GVT++ M G P+ GE L
Sbjct: 190 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248
Query: 334 -----DTYDKIVNNSLVFPDAMNPELRNLLEGL--LCKDPTRRLTLN 373
D Y +V ++ D+ P+ R L+ + +DP R L +
Sbjct: 249 PICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMARDPQRYLVIQ 294
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 35 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 91
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 92 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 202
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 262 GRMDPPKNCP 271
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 27 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 83
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 84 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 140
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 141 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 194
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 195 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 253
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 254 GRMDPPKNCP 263
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 62 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 118
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 119 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 176 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 229
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 230 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 288
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 289 GRMDPPKNCP 298
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 122
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF +++ + G P
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 183 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 42 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 98
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 99 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLVA---PSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 156 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 209
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 210 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 268
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 269 GRMDPPKNCP 278
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 71/305 (23%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
N V + +G GS G VV ++ S G+ A+K ++ + + A+ +++ L+
Sbjct: 33 NLVVSEKILGYGSSGTVV-FQGSFQGRPVAVK--------RMLIDFCDIALMEIK---LL 80
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF-YMVLEY--------VEGKWDNDGFGQPGAIGESMA 228
+ HPN+ I +D F Y+ LE VE K +D +
Sbjct: 81 TESDDHPNV---IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE-------NLKLQ 130
Query: 229 RKY-----LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSG-------------TVKIGDF 270
++Y LR I SG+ +LH ++H D+KP N+LV+ S + I DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 271 SVSQVFEDDNDVLRRS----PGTPVFTAPECCLGLTYG--GKAADTWAVGVTLYYMII-G 323
+ + + R + GT + APE T ++ D +++G YY++ G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 324 QYPFLGETLQDTYDKIVN--NSLVFPDAMN--------PELRNLLEGLLCKDPTRRLTLN 373
++PF D Y + N + D M E +L+ ++ DP +R T
Sbjct: 251 KHPF-----GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 374 DVAKH 378
V +H
Sbjct: 306 KVLRH 310
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 45/287 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ +G+G++G V +G+ I + +LR A S A ++ E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 126
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF +++ + G P
Sbjct: 127 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPF-------------LGETLQ-- 333
+ + A E L Y + +D W+ GVT++ M G P+ GE L
Sbjct: 187 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 245
Query: 334 -----DTYDKIVNNSLVFPDAMNPELRNLLEGL--LCKDPTRRLTLN 373
D Y +V ++ D+ P+ R L+ + +DP R L +
Sbjct: 246 PICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMARDPQRYLVIQ 291
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 71/305 (23%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
N V + +G GS G VV ++ S G+ A+K ++ + + A+ +++ L+
Sbjct: 33 NLVVSEKILGYGSSGTVV-FQGSFQGRPVAVK--------RMLIDFCDIALMEIK---LL 80
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF-YMVLEY--------VEGKWDNDGFGQPGAIGESMA 228
+ HPN+ I +D F Y+ LE VE K +D +
Sbjct: 81 TESDDHPNV---IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE-------NLKLQ 130
Query: 229 RKY-----LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSG-------------TVKIGDF 270
++Y LR I SG+ +LH ++H D+KP N+LV+ S + I DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 271 SVSQVFEDDNDVLRRS----PGTPVFTAPECCLGLTYG--GKAADTWAVGVTLYYMII-G 323
+ + + R + GT + APE T ++ D +++G YY++ G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 324 QYPFLGETLQDTYDKIVN--NSLVFPDAMN--------PELRNLLEGLLCKDPTRRLTLN 373
++PF D Y + N + D M E +L+ ++ DP +R T
Sbjct: 251 KHPF-----GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 374 DVAKH 378
V +H
Sbjct: 306 KVLRH 310
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 50 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVYSEQDELDFLMEALIISKFN 106
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 107 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 217
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 277 GRMDPPKNCP 286
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 77 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 53 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 109
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 110 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 166
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLR----RSP 287
I G YL ++ +H DI N L+ P KIGDF +++ D+ R R
Sbjct: 167 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAGYYRKG 220
Query: 288 GT---PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
G PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 221 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 279
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 280 GRMDPPKNCP 289
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 222 AIGESMARKYLRDIVSGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDD- 279
I E + K IV L +LH +V+H D+KP N+L+ G VK DF +S DD
Sbjct: 132 TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDV 191
Query: 280 -NDVLRRSPGTPVFTAPECC---LGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQ 333
D+ G + APE L +D W++G+T + I ++P+ G Q
Sbjct: 192 AKDI---DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQ 248
Query: 334 DTYDKIVNNSLVFP-DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
+ S P D + E + L K+ R T ++ +H +
Sbjct: 249 QLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G++G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 100 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 151
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 152 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 266
Query: 334 DTY 336
+ +
Sbjct: 267 ELF 269
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 81 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 35 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 91
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S ++++E + G D F QP ++ RD
Sbjct: 92 HQNIVRCIGV--SLQSLPRFILMELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 202
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 262 GRMDPPKNCP 271
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+D+ + YL +H D+ N LV G VK+ DF +S+ DD + PV
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN 341
+P L + +D WA GV ++ + +G+ P+ T +T + I
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 39/277 (14%)
Query: 124 RKIGAGSYGKVV---LYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKM 180
+ +G+G++GKV+ Y S G +I+ K K + E M++++ ++ ++
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTG--VSIQVAVKMLKEKADSSEREALMSELK---MMTQL 105
Query: 181 LQHPNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDN------DGFGQPGAIGESMARK--- 230
H NIVNL+ S Y++ EY G N + F + E+ R
Sbjct: 106 GSHENIVNLLGAC--TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 231 -------------YLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQ-VF 276
+ + G+ +L + VH D+ N+LV VKI DF +++ +
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 277 EDDNDVLRRSPGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQD 334
D N V+R + PV + APE Y K +D W+ G+ L+ + +G P+ G +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIK-SDVWSYGILLWEIFSLGVNPYPGIPVDA 282
Query: 335 TYDKIVNNSLVF--PDAMNPELRNLLEGLLCKDPTRR 369
+ K++ N P E+ +++ D +R
Sbjct: 283 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKR 319
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 50 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 106
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S ++++E + G D F QP ++ RD
Sbjct: 107 HQNIVRCIGV--SLQSLPRFILMELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLRRS----- 286
I G YL ++ +H DI N L+ P KIGDF +++ D+ R S
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKG 217
Query: 287 --PGTPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 277 GRMDPPKNCP 286
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDK--PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 92 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+
Sbjct: 76 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFN 132
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 133 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 235 IVSGLMYLHGHNVVHGDIKPDNLLV---APSGTVKIGDFSVSQVFEDDNDVLR----RSP 287
I G YL ++ +H DI N L+ P KIGDF +++ D+ R R
Sbjct: 190 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAGYYRKG 243
Query: 288 GT---PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVNN 342
G PV + PE + + K DTW+ GV L+ + +G P+ ++ Q+ + + +
Sbjct: 244 GCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
Query: 343 SLVFPDAMNP 352
+ P P
Sbjct: 303 GRMDPPKNCP 312
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDK--PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 84 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDK--PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 85 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDK--PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 92 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ + +G++G V +G+ I + +LR A S A ++ E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 77
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 129
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 130 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 190 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ + +G++G V +G+ I + +LR A S A ++ E +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--------IGSQYLLNW 122
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPFLG 329
+ + A E L Y + +D W+ GVT++ M G P+ G
Sbjct: 183 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDG 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 45/287 (15%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E+ ++ + +G++G V +G+ I + +LR A S A ++ E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV----AIKELREATSPKANKEILDEAYV 77
Query: 178 MKMLQHPNIVNLIEVIDDPNSD------HFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + +P++ L+ + F +L+YV DN IG +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--------IGSQYLLNW 129
Query: 232 LRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPG-TP 290
I G+ YL +VH D+ N+LV VKI DF ++++ + G P
Sbjct: 130 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 291 V-FTAPECCLGLTYGGKAADTWAVGVTLY-YMIIGQYPF-------------LGETLQ-- 333
+ + A E L Y + +D W+ GVT++ M G P+ GE L
Sbjct: 190 IKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248
Query: 334 -----DTYDKIVNNSLVFPDAMNPELRNLLEGL--LCKDPTRRLTLN 373
D Y +V ++ D+ P+ R L+ + +DP R L +
Sbjct: 249 PICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMARDPQRYLVIQ 294
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDK--PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 92 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLS--------KL--RVAPSETAMT 169
Y+ VRK+G G + V L + ++ H A+K + KL RV ++
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 170 DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-------GKWDNDGFGQPGA 222
D I+K+L H N PN H MV E + K+++ G
Sbjct: 81 DSMGANHILKLLDHFNHKG-------PNGVHVVMVFEVLGENLLALIKKYEHRG------ 127
Query: 223 IGESMARKYLRDIVSGLMYLHGH-NVVHGDIKPDNLLV----APSG--TVKIGDFSVSQV 275
I ++ + ++ GL Y+H ++H DIKP+N+L+ +P +KI D +
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 276 FEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
+++ S T + +PE LG +G AD W+ ++ +I G + F
Sbjct: 188 YDEH---YTNSIQTREYRSPEVLLGAPWGC-GADIWSTACLIFELITGDFLF 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 222 AIGESMARKYLRDIVSGLMYLHGH-NVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDN 280
I E + K IV L +LH +V+H D+KP N+L+ G VK+ DF +S + D+
Sbjct: 149 TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDS 207
Query: 281 DVLRRSPGTPVFTAPECC---LGLTYGGKAADTWAVGVTLYYMIIGQYPF--LGETLQDT 335
G + APE L +D W++G+T+ + I ++P+ G Q
Sbjct: 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 267
Query: 336 YDKIVNNSLVFP-DAMNPELRNLLEGLLCKDPTRRLTLNDVAKHTW 380
+ S P D + E + L K+ R T ++ +H +
Sbjct: 268 KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLS--------KL--RVAPSETAMT 169
Y+ VRK+G G + V L + ++ H A+K + KL RV ++
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 170 DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-------GKWDNDGFGQPGA 222
D I+K+L H N PN H MV E + K+++ G
Sbjct: 81 DSMGANHILKLLDHFNHKG-------PNGVHVVMVFEVLGENLLALIKKYEHRG------ 127
Query: 223 IGESMARKYLRDIVSGLMYLHGH-NVVHGDIKPDNLLV----APSG--TVKIGDFSVSQV 275
I ++ + ++ GL Y+H ++H DIKP+N+L+ +P +KI D +
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 276 FEDDNDVLRRSPGTPVFTAPECCLGLTYGGKAADTWAVGVTLYYMIIGQYPF 327
+++ S T + +PE LG +G AD W+ ++ +I G + F
Sbjct: 188 YDEH---YTNSIQTREYRSPEVLLGAPWGC-GADIWSTACLIFELITGDFLF 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 124 RKIGAGSYGKVVLYRS-SLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML- 181
+ +G G++G+VVL + LD K + L+ +E ++D+ E+ +MKM+
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDK--PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 182 QHPNIVNLIEVI--DDPNSDHFYMVLEYVEGKWDNDGFGQ----PGA---------IGES 226
+H NI+NL+ D P Y+++EY K + + Q PG E
Sbjct: 133 KHKNIINLLGACTQDGP----LYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 227 MARKYL----RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDV 282
++ K L + G+ YL +H D+ N+LV +KI DF +++ +
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 283 LRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTY 336
+ + G PV + APE Y + +D W+ GV L+ + +G P+ G +++ +
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G +G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 87 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 138
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 139 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 253
Query: 334 DTY 336
+ +
Sbjct: 254 ELF 256
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G +G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 92 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 143
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 144 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 258
Query: 334 DTY 336
+ +
Sbjct: 259 ELF 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G +G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 89 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 140
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 141 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 255
Query: 334 DTY 336
+ +
Sbjct: 256 ELF 258
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G +G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 146 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 197
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 198 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 312
Query: 334 DTY 336
+ +
Sbjct: 313 ELF 315
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G++G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 100 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 151
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + +KI DF +++
Sbjct: 152 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 266
Query: 334 DTY 336
+ +
Sbjct: 267 ELF 269
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 44/243 (18%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +G G++G+VV+ + K +A + + L+ +E ++D+ E+ +MKM+ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA-VKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 183 HPNIVNLIEVI--DDPNSDHFYMVLEY-----------------VEGKWDNDGFGQPGAI 223
H NI+NL+ D P Y+++EY +E +D + +
Sbjct: 100 HKNIINLLGACTQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE---- 151
Query: 224 GESMARKYLRDIVS-------GLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVF 276
E M +D+VS G+ YL +H D+ N+LV + ++I DF +++
Sbjct: 152 -EQMT---FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 277 EDDNDVLRRSPG-TPV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQ 333
+ + + + G PV + APE Y + +D W+ GV ++ + +G P+ G ++
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVE 266
Query: 334 DTY 336
+ +
Sbjct: 267 ELF 269
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 32/213 (15%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR---REVLIMKM 180
R IG G +G VV + +D I+ KS LS++ T M V RE L+M+
Sbjct: 27 RVIGKGHFG-VVYHGEYIDQAQNRIQCAIKS-LSRI------TEMQQVEAFLREGLLMRG 78
Query: 181 LQHPNIVNLIEVIDDPNS-DHF---YM----VLEYVEGKWDNDGFGQPGAIGESMARKYL 232
L HPN++ LI ++ P H YM +L+++ N + G +AR
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVAR--- 135
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDD---NDVLRRSPGT 289
G+ YL VH D+ N ++ S TVK+ DF +++ D + R
Sbjct: 136 -----GMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 290 PV-FTAPECCLGLTYGGKAADTWAVGVTLYYMI 321
PV +TA E + K +D W+ GV L+ ++
Sbjct: 191 PVKWTALESLQTYRFTTK-SDVWSFGVLLWELL 222
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+D+ + YL +H D+ N LV G VK+ DF +S+ DD PV
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 170
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN 341
+P L + +D WA GV ++ + +G+ P+ T +T + I
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+D+ + YL +H D+ N LV G VK+ DF +S+ DD PV
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 166
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN 341
+P L + +D WA GV ++ + +G+ P+ T +T + I
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 233 RDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVSQVFEDDNDVLRRSPGTPVF 292
+D+ + YL +H D+ N LV G VK+ DF +S+ DD PV
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 171
Query: 293 TAPECCLGLTYGGKAADTWAVGVTLYYMI-IGQYPFLGETLQDTYDKIVN 341
+P L + +D WA GV ++ + +G+ P+ T +T + I
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,134,528
Number of Sequences: 62578
Number of extensions: 572639
Number of successful extensions: 4521
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1145
Number of HSP's gapped (non-prelim): 1337
length of query: 410
length of database: 14,973,337
effective HSP length: 101
effective length of query: 309
effective length of database: 8,652,959
effective search space: 2673764331
effective search space used: 2673764331
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)