Query 015270
Match_columns 410
No_of_seqs 135 out of 477
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 09:39:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qde_A Cellobiose phosphorylas 100.0 3.6E-29 1.2E-33 275.1 18.3 287 4-358 387-720 (811)
2 3rrs_A Cellobiose phosphorylas 100.0 1E-28 3.5E-33 271.9 17.6 294 4-359 394-734 (822)
3 2z07_A Putative uncharacterize 100.0 7.6E-28 2.6E-32 244.6 16.6 253 46-362 99-418 (420)
4 3c68_A Uncharacterized protein 99.9 6.6E-26 2.3E-30 247.7 25.0 200 117-366 551-757 (761)
5 2jg0_A Periplasmic trehalase; 99.9 1.2E-25 4.1E-30 237.0 22.0 271 36-368 160-504 (535)
6 1v7w_A Chitobiose phosphorylas 99.9 2.3E-26 7.9E-31 251.6 16.6 230 48-323 425-669 (807)
7 3cih_A Putative alpha-rhamnosi 99.8 2.3E-19 7.9E-24 195.3 19.1 220 38-340 371-603 (739)
8 2okx_A Rhamnosidase B; alpha b 99.7 2.7E-17 9.2E-22 183.7 19.0 239 46-366 625-876 (956)
9 1lf6_A Glucoamylase; (alpha/al 99.4 2.9E-12 9.8E-17 138.6 15.2 257 47-367 394-667 (684)
10 1ulv_A Glucodextranase; GH fam 99.3 2E-11 7E-16 137.2 16.1 257 47-369 384-670 (1020)
11 2p0v_A Hypothetical protein BT 99.0 1.8E-09 6.1E-14 111.9 14.5 256 46-366 177-468 (489)
12 3p2c_A Putative glycosyl hydro 98.8 2.3E-08 7.8E-13 103.0 14.1 261 45-367 159-451 (463)
13 3qt9_A Putative uncharacterize 98.6 7.7E-07 2.6E-11 90.9 15.0 262 43-364 129-420 (427)
14 3qry_B Putative uncharacterize 98.4 3E-06 1E-10 86.6 14.5 261 43-363 128-419 (426)
15 2fba_A Glucoamylase Glu1; (alp 98.3 3.1E-05 1.1E-09 80.8 19.5 252 47-367 143-486 (492)
16 1gai_A Glucoamylase-471; hydro 98.2 6.7E-05 2.3E-09 78.0 20.2 238 51-367 132-429 (472)
17 2vn4_A Glucoamylase; hydrolase 98.2 7.2E-05 2.5E-09 79.8 19.3 239 51-367 133-434 (599)
18 2rdy_A BH0842 protein; PSI-II, 91.0 0.66 2.3E-05 50.9 9.5 93 51-147 450-552 (803)
19 2gz6_A N-acetyl-D-glucosamine 89.3 12 0.0004 36.3 16.2 98 49-164 54-152 (388)
20 2eab_A Alpha-fucosidase; glyco 87.6 9.6 0.00033 42.4 15.6 86 50-139 507-598 (899)
21 1h54_A Maltose phosphorylase; 79.0 3.7 0.00013 44.7 7.6 82 51-137 429-515 (754)
22 3gt5_A N-acetylglucosamine 2-e 74.3 69 0.0024 31.4 15.4 94 54-165 57-150 (402)
23 2gz6_A N-acetyl-D-glucosamine 48.9 1.8E+02 0.0063 27.7 13.9 97 48-165 114-210 (388)
24 2zbl_A Putative isomerase; N-a 44.0 2.4E+02 0.0083 27.6 13.5 253 54-366 56-328 (421)
25 3k7x_A LIN0763 protein; Q92DQ0 41.5 2.2E+02 0.0076 27.5 11.6 102 46-164 148-250 (349)
26 1fp3_A N-acyl-D-glucosamine 2- 23.4 4.9E+02 0.017 24.8 11.6 97 48-164 51-159 (402)
No 1
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.96 E-value=3.6e-29 Score=275.15 Aligned_cols=287 Identities=16% Similarity=0.134 Sum_probs=207.4
Q ss_pred CCCCCCCccceeEeeeccCCCCCCCCcccccccCCccccCCcCCCCcHHHHHHHHHHHHHHhCChhHHhh----------
Q 015270 4 HSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQER---------- 73 (410)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~Ge~a~~~~~sVDatLWfi~a~~~Y~~~TgD~~f~~~---------- 73 (410)
+|-.+|-+|.-|. |..+ + |...+ +.+.+|.+||+|+++++|++.|||.+|+++
T Consensus 387 ~Q~~dG~~~h~~~----p~~~------~------g~~~~-~~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~ 449 (811)
T 3qde_A 387 TQLEDGSAYHQYQ----PLTK------K------GNNEI-GSNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSK 449 (811)
T ss_dssp TBCTTSCBCSEEC----TTTC------C------EECTT-CCCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEE
T ss_pred hcccCCCccceec----CCCC------C------CCCCC-CCCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcc
Confidence 5778899988884 4210 0 21111 134699999999999999999999999974
Q ss_pred -----HHHHHHHHHHHHhhhhcCCCCCCceeeeCCCccccc--------cc-----------ccCCCceehhHHHHHHHH
Q 015270 74 -----IDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDR--------RM-----------GIHGHPLEIQALFYSALL 129 (410)
Q Consensus 74 -----~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr--------~~-----------~~~G~pVEINALwYnAL~ 129 (410)
+++.++++++++.. +.+. +......+|+|. ++ +..|.+|++|+|||+||+
T Consensus 450 ~~tl~eh~~ra~~~~~~~~-----g~~G-L~~~g~~DWnD~ln~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~ 523 (811)
T 3qde_A 450 ADTMFEHLTRSFYHVVNNL-----GPHG-LPLIGRADWNDCLNLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGK 523 (811)
T ss_dssp EEEHHHHHHHHHHHHHTCB-----CTTS-SBBCBTCSSSTTCCSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcC-----CCCC-CcccccCCchhhccccccccccCccccccccccCCcccCHHHHHHHHHHHH
Confidence 25677777765321 2221 111111123331 11 246999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccCCCC
Q 015270 130 CAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGG 209 (410)
Q Consensus 130 ~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~ 209 (410)
.+++|++.+ ++.+.++++.++|++|++.|+++||.. +|..+.++.+|.
T Consensus 524 ~~a~lA~~l-Gd~~~A~~~~~~A~~lk~a~~~~~Wdg-------------------------------~~y~ra~~~dg~ 571 (811)
T 3qde_A 524 DYVKLCEYM-GLEEEARKAQQHIDAMKEAILKYGYDG-------------------------------EWFLRAYDDFGR 571 (811)
T ss_dssp HHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHSBCS-------------------------------SSBCCEECTTSC
T ss_pred HHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCc-------------------------------CeEEEEEcCCCC
Confidence 999999985 456778888999999999999999942 133343443332
Q ss_pred cc-ccccCCCccccchhccchhHHHhcCCCCHH-HHHHHHHHHHHhhhhhhcCCCCcccCCCcC----CCCceeeeCCCC
Q 015270 210 YL-IGNLQPAHMDFRFFSLGNIWSIVNGLATRD-QSHAILDLMEAKWADLVADMPLKICYPALE----GQEWQIITGSDP 283 (410)
Q Consensus 210 y~-~~~~rP~~~d~r~~a~gN~LAl~~~ll~~~-~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~----d~~y~~~y~g~~ 283 (410)
-. ....++++ +++.++.+++++|+++++ |++++++.|.+ +|+||+|||+|+|+.. |+||. .
T Consensus 572 ~~gs~~~~~~q----i~~~~q~~avlsGia~~e~ra~~~m~~v~~---~L~t~~Glrll~p~f~~~~~d~g~~------~ 638 (811)
T 3qde_A 572 KVGSKENEEGK----IFIESQGFCVMAEIGLEDGKALKALDSVKK---YLDTPYGLVLQNPAFTRYYIEYGEI------S 638 (811)
T ss_dssp EESSTTSSSCC----EESHHHHHHHHTTCSSSSSHHHHHHHHHHH---HHCCTTCCCSEESCCCSCCTTTGGG------G
T ss_pred CCCccCCCCce----EEecchhHHHHhCCCCchHHHHHHHHHHHH---HhCCCcceEeecCCccccCCCCCce------e
Confidence 11 12345677 577888899999999999 99999999998 9999999999999743 44443 3
Q ss_pred CCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHHHHHh------cCCCCCccccCCCCC-CCCCCcchHhHHHH
Q 015270 284 KNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRL------SRDKWPEYYDTKRAR-FIGKQAQLFQTWSI 356 (410)
Q Consensus 284 ~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~~l------~~~~l~ElFdG~~g~-~~G~~ac~~QAWSv 356 (410)
.+.|.+||||++|||-+..++.|++|+|+.++|.+++..+.... ...+.||.|+|+... .....||..|+|..
T Consensus 639 ~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~Gr~~~~w~t 718 (811)
T 3qde_A 639 TYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAYIEDVSDIHKLEPYVYAQMVAGKDAKRHGEAKNSWLT 718 (811)
T ss_dssp TSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGGSGGGHHHHCSCTTSCEEEECCTTSTTTTCEEEESCS
T ss_pred ccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChhhhcchhhhcCcCcEEeccccccccCCCCCCCcchhHH
Confidence 46788999999999999999999999999999999886543311 125789999998621 12245678999965
Q ss_pred HH
Q 015270 357 AG 358 (410)
Q Consensus 357 Ae 358 (410)
|+
T Consensus 719 Gs 720 (811)
T 3qde_A 719 GT 720 (811)
T ss_dssp TH
T ss_pred HH
Confidence 55
No 2
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.96 E-value=1e-28 Score=271.89 Aligned_cols=294 Identities=16% Similarity=0.146 Sum_probs=208.0
Q ss_pred CCCCCCCccceeEeeeccCCCCCCCCcccccccCCccccCCcCCCCcHHHHHHHHHHHHHHhCChhHHhh--H-------
Q 015270 4 HSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQER--I------- 74 (410)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~Ge~a~~~~~sVDatLWfi~a~~~Y~~~TgD~~f~~~--~------- 74 (410)
+|-.+|-+|.-|. |.. + + |...+ +.+.+|.+||+++++++|++.|||.+|+++ |
T Consensus 394 ~Q~~dG~v~h~~~----p~~-----~-~------g~~~~-~~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~ 456 (822)
T 3rrs_A 394 TQFADGSAYHQYQ----PLT-----K-R------GNNDI-GSGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGS 456 (822)
T ss_dssp TCCTTSCCCSEEE----TTT-----T-E------ECTTT-CSCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTC
T ss_pred hhcccCcccceec----CcC-----C-C------CccCC-CCcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccc
Confidence 6778899999885 421 0 1 21111 134689999999999999999999999975 2
Q ss_pred ------HHHHHHHHHHHhhhhcCCCCCCceeeeCCCcc--ccccc-----------ccCCCceehhHHHHHHHHHHHHhh
Q 015270 75 ------DVQTGIKMILKLCLADGFDMFPTLLVTDGSCM--IDRRM-----------GIHGHPLEIQALFYSALLCAREML 135 (410)
Q Consensus 75 ------~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~--~Dr~~-----------~~~G~pVEINALwYnAL~~~~~La 135 (410)
++.++++++++.....|.--...+.|+|+-.+ ++..+ ++.|.+|++|+|||+||+.+++|+
T Consensus 457 ~~tl~eh~~ra~~~~~~~~g~~GLp~~g~gDWnD~ln~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA 536 (822)
T 3rrs_A 457 EVPLFEHLTRSFEFTVTHRGPHGLPLIGRADWNDCLNLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELA 536 (822)
T ss_dssp CEEHHHHHHHHHHHHHHSBCTTSSBBCBTCSSSTTCCTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCCCCcccCCCcchhhcccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHH
Confidence 67777777764211111100001123332211 11111 256999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccCCCCcc-ccc
Q 015270 136 APEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYL-IGN 214 (410)
Q Consensus 136 ~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~-~~~ 214 (410)
+.+ ++.+.++++.++|++|++.|+++||.. +|..+.++..|.-. ...
T Consensus 537 ~~~-G~~~~A~~~~~~A~~lk~a~~~~~Wdg-------------------------------~~y~ra~d~dg~~~gs~~ 584 (822)
T 3rrs_A 537 ARR-GLADVADRARGHVAEMRDALLTDGWDG-------------------------------SWFLRAYDYYGNPIGTDA 584 (822)
T ss_dssp HHT-TCHHHHHHHHHHHHHHHHHHHTTTBCS-------------------------------SSBCCEECTTSCEESCTT
T ss_pred HHc-CChHHHHHHHHHHHHHHHHHHHhccCc-------------------------------ceeEEEEcCCCCCccccC
Confidence 985 566778888999999999999999942 13334344333211 123
Q ss_pred cCCCccccchhccchhHHHhcCCCCHH-------HHHHHHHHHHHhhhhhhcCCCCcccCCCcC----CCCceeeeCCCC
Q 015270 215 LQPAHMDFRFFSLGNIWSIVNGLATRD-------QSHAILDLMEAKWADLVADMPLKICYPALE----GQEWQIITGSDP 283 (410)
Q Consensus 215 ~rP~~~d~r~~a~gN~LAl~~~ll~~~-------~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~----d~~y~~~y~g~~ 283 (410)
.++++ +++.++.+++++|+++++ |++++++.|.+ +|+||+|||+|+|+.. ++||. .
T Consensus 585 ~~~~~----i~~~~q~~avlsGia~~e~~~~~~~~a~~al~~v~~---~L~t~~Girll~p~f~~~~~~~g~~------~ 651 (822)
T 3rrs_A 585 HDEGK----IWIEPQGFAVMAGVGVGEGPQDTDAPAIKALDSVNE---MLATDHGMVLQYPAYTTYQVHMGEV------S 651 (822)
T ss_dssp SSSCC----EEHHHHHHHHHTTTTCCSSTTCTTSHHHHHHHHHHH---HTEETTEEBSEESCCSSCCTTSTTG------G
T ss_pred CCCce----EEeccchhHhhcCCCCcccccchHHHHHHHHHHHHH---HcCCCCeEEEcCCCcccccCCCCcc------c
Confidence 45676 567777888999999999 99999999998 9999999999999733 44443 4
Q ss_pred CCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHHHH--Hh----cCCCCCccccCCCC-CCCCCCcchHhHHHH
Q 015270 284 KNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEK--RL----SRDKWPEYYDTKRA-RFIGKQAQLFQTWSI 356 (410)
Q Consensus 284 ~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~--~l----~~~~l~ElFdG~~g-~~~G~~ac~~QAWSv 356 (410)
.+.|.+||||++|||-+..++.|++++|+.++|.+++..+.+ +. ...+.||+|+|+.. ......||..|+|..
T Consensus 652 ~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w~t 731 (822)
T 3rrs_A 652 TYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRITPAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSWLT 731 (822)
T ss_dssp GSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHCHHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEESSS
T ss_pred ccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhCcccccchhHhhccCcEEEeccccccCCCCCCCccchhhh
Confidence 467889999999999999999999999999999998854322 21 23578999999862 111235678999966
Q ss_pred HHH
Q 015270 357 AGY 359 (410)
Q Consensus 357 Ae~ 359 (410)
|..
T Consensus 732 Gsa 734 (822)
T 3rrs_A 732 GTA 734 (822)
T ss_dssp THH
T ss_pred hhH
Confidence 553
No 3
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.95 E-value=7.6e-28 Score=244.60 Aligned_cols=253 Identities=13% Similarity=0.100 Sum_probs=184.5
Q ss_pred CCCCcHHHHHHHHHHHHHHhCC----hhHHhh--HHHHHHHHHHHHhhhh--cCCCCCCceeeeCCC----ccccc----
Q 015270 46 APVDSGLWWIILLRAYGKCSGD----LLVQER--IDVQTGIKMILKLCLA--DGFDMFPTLLVTDGS----CMIDR---- 109 (410)
Q Consensus 46 ~sVDatLWfi~a~~~Y~~~TgD----~~f~~~--~~l~~al~~i~~~~~~--~~f~~~~~ll~~dG~----~~~Dr---- 109 (410)
.++|.++++++++.+|++.||| .+|+++ |.+++.++|+.+..+. +|+-.... -+.+|- .|.|.
T Consensus 99 ~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p~l~~~~~~~~~~~d~~~~Gl~~~~~-~we~G~~~~~~w~~~~~~~ 177 (420)
T 2z07_A 99 SGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVH-PWESGMDNSPAWDKPLSRV 177 (420)
T ss_dssp CSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCBSS-GGGGTCTTCGGGHHHHHTC
T ss_pred CCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceeeec-CCCcCCCCCcccccccccc
Confidence 5789999999999999999999 899987 7888888888765322 12100000 011221 12111
Q ss_pred ---------cc----------------------------------------ccCCCceehhHHHHHHHHHHHHhhCCCCC
Q 015270 110 ---------RM----------------------------------------GIHGHPLEIQALFYSALLCAREMLAPEDG 140 (410)
Q Consensus 110 ---------~~----------------------------------------~~~G~pVEINALwYnAL~~~~~La~~~~~ 140 (410)
+. ...+.+|++||++|.+++.+++|++.+++
T Consensus 178 ~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~ 257 (420)
T 2z07_A 178 PVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQE 257 (420)
T ss_dssp CC-----------CCSCC-------CHHHHHHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCcchhhhhhhhccccccCCcHHHHHHHHHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCc
Confidence 00 00134788999999999999999998776
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccCCCCccccccCCCcc
Q 015270 141 SADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHM 220 (410)
Q Consensus 141 ~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~~~~~rP~~~ 220 (410)
+ +++..++++.+++.|++ ||.++++ ..+|+.... +..++
T Consensus 258 ~---a~~~~~~a~~~~~ai~~-~Wd~~~g-----------------------------~~~d~~~~~-----g~~~~--- 296 (420)
T 2z07_A 258 D---PYEIEEWIVRGEVGLEA-LWDREAG-----------------------------FYFSWDLVA-----GEPIA--- 296 (420)
T ss_dssp C---CHHHHHHHHHHHHHHHH-TEETTTT-----------------------------EECCEETTT-----TEECC---
T ss_pred c---HHHHHHHHHHHHHHHHH-hhCcccC-----------------------------eeEeeeCCC-----CCeec---
Confidence 5 34556778888999999 9974311 122222111 11112
Q ss_pred ccchhccchhHHHhcCCCCHHHHHHHHHHHHHhhhhhh--cCCCCcccCCCcCCCCceeeeCCCCCCCCcccccCCCccc
Q 015270 221 DFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLV--ADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPT 298 (410)
Q Consensus 221 d~r~~a~gN~LAl~~~ll~~~~a~~Vl~~v~~~~~~Ll--tp~GLRsL~P~~~d~~y~~~y~g~~~~rp~aYHNGtVWP~ 298 (410)
.....+++++++|+++++++++|++.+. +++ +++||||++| +++.++|.+||+|+|||+
T Consensus 297 ---~~~~~~~~pL~~g~~~~~~a~~v~~~l~----~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~ 357 (420)
T 2z07_A 297 ---VKTSAGFLPLFAGTPHQGRASLLAQEAE----RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWIN 357 (420)
T ss_dssp ---CCBGGGGTHHHHTCSCHHHHHHHHHHHH----HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHH
T ss_pred ---cccHHhHHHHHcCCCCHHHHHHHHHHHH----HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchh
Confidence 2345567888999999999999999985 677 9999999998 345667789999999999
Q ss_pred hHHHHHHHHHHcCChHHHHHHHHHHHHHhcCCCCCccccCCCCCCCCCCcchHhHHHHHHHHHH
Q 015270 299 LLWQFTVACIKMNRPEIAARAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVS 362 (410)
Q Consensus 299 LlG~y~~A~~r~g~~~~A~~~L~~~~~~l~~~~l~ElFdG~~g~~~G~~ac~~QAWSvAe~Lr~ 362 (410)
++++++.|+.++|+.+.|.+++......+..+++.|.||+.+|.+ .+|..|+||+|.+|..
T Consensus 358 ~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~~~~~~E~yd~~~g~~---~g~~~fgWs~~~~l~l 418 (420)
T 2z07_A 358 VNWMVAEGFRDYGFAALAARLKADALALMEREGFREYYDPLTGQG---RGGEGFSWSAALALFW 418 (420)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCSEEEECTTTCCE---EEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCCeeeeeCCCCCCc---CCCCCCchHHHHHHHH
Confidence 999999999999999999888755444444578899999998754 3578999999998875
No 4
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=99.94 E-value=6.6e-26 Score=247.74 Aligned_cols=200 Identities=13% Similarity=0.069 Sum_probs=151.5
Q ss_pred ceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCC
Q 015270 117 PLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQI 196 (410)
Q Consensus 117 pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~ 196 (410)
+|++||+||.|++.+++|++.++ +.+.+.++.++++++++.|+++||.++++.
T Consensus 551 ~VdlnA~ly~al~~lA~lA~~LG-~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~-------------------------- 603 (761)
T 3c68_A 551 SVDQASYMYSDNHYLAEMATILG-KPEEAKRYRQLAQQLADYINTCMFDPTTQF-------------------------- 603 (761)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHTEETTTTE--------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHhCcCccCCE--------------------------
Confidence 78999999999999999999864 556677788889999999999999753221
Q ss_pred CccccccccCCCCc---cccccCCCccccchhccchhHHHhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCcccCCCcCCC
Q 015270 197 PPWLVEWMPNKGGY---LIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQ 273 (410)
Q Consensus 197 ~~~l~d~v~~~~~y---~~~~~rP~~~d~r~~a~gN~LAl~~~ll~~~~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~d~ 273 (410)
.+|+....+.. ..+.+.+++ .+..+|++++++|+++++++++|++.+.+ -..|.+++|+||++|. +
T Consensus 604 ---y~D~~~~~~~~~~~~~g~~~sn~----~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~-~~~l~t~~Girtls~~--~- 672 (761)
T 3c68_A 604 ---YYDVRIEDKPLANGCAGKPIVER----GKGPEGWSPLFNGAATQANADAVVKVMLD-PKEFNTFVPLGTAALT--N- 672 (761)
T ss_dssp ---ECCEECCSSCCTTSCSSCBCGGG----CCCGGGGHHHHTTCSCHHHHHHHHHHHTC-TTTTCCSSCSCSSCTT--C-
T ss_pred ---EEEEecCCCccccccccceeecc----hhhHHHHHHHHcCCCCHHHHHHHHHHHhC-hhhhcCCCCccccCCC--C-
Confidence 22221110000 011222332 34567889999999999999999999974 1168899999999993 4
Q ss_pred CceeeeCCCCCCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHHHH---H-hcCCCCCccccCCCCCCCCCCcc
Q 015270 274 EWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEK---R-LSRDKWPEYYDTKRARFIGKQAQ 349 (410)
Q Consensus 274 ~y~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~---~-l~~~~l~ElFdG~~g~~~G~~ac 349 (410)
+.++|.+||||+|||.++++.+.|+.++|+.+.|.+++..... + ...+.++|.||+.+|.+. +|
T Consensus 673 ---------p~y~p~~yw~GpvW~~~~~lli~aL~~~G~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p~---G~ 740 (761)
T 3c68_A 673 ---------PAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQ---GA 740 (761)
T ss_dssp ---------TTCCTTCTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCEE---SC
T ss_pred ---------cccCCCccccCCcccchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCcC---cC
Confidence 4456789999999998888889999999999999988854333 2 234789999999987544 47
Q ss_pred hHhHHHHHHHHHHHHHh
Q 015270 350 LFQTWSIAGYLVSKILL 366 (410)
Q Consensus 350 ~~QAWSvAe~Lr~~~~l 366 (410)
.+|+||+|.+|++....
T Consensus 741 ~~fgWSaa~~l~ll~~y 757 (761)
T 3c68_A 741 PNFSWSAAHLYMLYNDF 757 (761)
T ss_dssp SSCHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHH
Confidence 89999999999887654
No 5
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.94 E-value=1.2e-25 Score=237.04 Aligned_cols=271 Identities=14% Similarity=0.165 Sum_probs=191.1
Q ss_pred cCCccccCC---cCCCCcHHHHHHHHHHHHHHhCChhHHhh--HHHHHHHHHHHHhhhhcCC---------CCCCceeee
Q 015270 36 DFGEAAIGR---VAPVDSGLWWIILLRAYGKCSGDLLVQER--IDVQTGIKMILKLCLADGF---------DMFPTLLVT 101 (410)
Q Consensus 36 ~~Ge~a~~~---~~sVDatLWfi~a~~~Y~~~TgD~~f~~~--~~l~~al~~i~~~~~~~~f---------~~~~~ll~~ 101 (410)
.+|-++.+. |.+++.++.|++++.+|++.|+| +|+++ |.+.+.++|.++.....+- .....++..
T Consensus 160 ~~G~IPng~r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~ 238 (535)
T 2jg0_A 160 TYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNR 238 (535)
T ss_dssp HHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEEC
T ss_pred cCCcccCCCCccCCCCCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccccccceeecCCCCccee
Confidence 456666653 78888888899999999999986 88887 6777777776442211000 000001110
Q ss_pred ----------------------------------------CCCcccccccc----------cCCCceehhHHHHHHHHHH
Q 015270 102 ----------------------------------------DGSCMIDRRMG----------IHGHPLEIQALFYSALLCA 131 (410)
Q Consensus 102 ----------------------------------------dG~~~~Dr~~~----------~~G~pVEINALwYnAL~~~ 131 (410)
.|.+...|-.. ....|||+||+||+|++.+
T Consensus 239 y~~~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~l 318 (535)
T 2jg0_A 239 YWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKIL 318 (535)
T ss_dssp CCCSCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHH
T ss_pred eccCCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHH
Confidence 02211111000 1236799999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccCCCCcc
Q 015270 132 REMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYL 211 (410)
Q Consensus 132 ~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~ 211 (410)
++|++.++ +.+.+.++.++++.+++.|++.||+++++ +.+|+.-..
T Consensus 319 a~lA~~lG-~~~~a~~~~~~A~~lk~ai~~~fWdee~G-----------------------------~y~D~~~~~---- 364 (535)
T 2jg0_A 319 ARASKAAG-DNAMANQYETLANARQKGIEKYLWNDQQG-----------------------------WYADYDLKS---- 364 (535)
T ss_dssp HHHHHHHT-CHHHHHHHHHHHHHHHHHHHHHSEETTTT-----------------------------EECCEETTT----
T ss_pred HHHHHHhC-ChHHHHHHHHHHHHHHHHHHHhCcCCCCC-----------------------------EEEEEeCCC----
Confidence 99999854 55667778899999999999999975311 122322111
Q ss_pred ccccCCCccccchhccchhHHHhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCcccCCCcCCCCceeeeCCCCCCCCcccc
Q 015270 212 IGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYH 291 (410)
Q Consensus 212 ~~~~rP~~~d~r~~a~gN~LAl~~~ll~~~~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~d~~y~~~y~g~~~~rp~aYH 291 (410)
-++++ .+...+++++++|+++++++++|++.+.+ +|++|+||||+++. +.+||
T Consensus 365 ---~~~~~----~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~~-----------------s~~yW 417 (535)
T 2jg0_A 365 ---HKVRN----QLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLNTTSVK-----------------SGQQW 417 (535)
T ss_dssp ---TEECC----CCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEECSBSCC-----------------CSSSS
T ss_pred ---CCEee----eehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCCCCcCC-----------------Ccccc
Confidence 12333 35667778899999999999999999997 99999999999862 34799
Q ss_pred cCC-CccchHHHHHHHHHHcCChHHHHHHHH----HHHHHh-cCCCCCccccCCCCCCCCCC----cchHhHHHHHHHHH
Q 015270 292 NAG-SWPTLLWQFTVACIKMNRPEIAARAVQ----VAEKRL-SRDKWPEYYDTKRARFIGKQ----AQLFQTWSIAGYLV 361 (410)
Q Consensus 292 NGt-VWP~LlG~y~~A~~r~g~~~~A~~~L~----~~~~~l-~~~~l~ElFdG~~g~~~G~~----ac~~QAWSvAe~Lr 361 (410)
+|+ |||+++++++.|+.++|+.+.|.++.. .+...+ ..+.++|+|||+++.+.|.+ .+..|+||+|.+|+
T Consensus 418 ~GpNvW~~~~~l~i~gL~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ 497 (535)
T 2jg0_A 418 DAPNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLK 497 (535)
T ss_dssp STTEECHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHH
T ss_pred CCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence 999 999999999999999999988877663 222222 24799999999987544421 13799999999998
Q ss_pred HHHHhcC
Q 015270 362 SKILLAD 368 (410)
Q Consensus 362 ~~~~l~~ 368 (410)
+.....+
T Consensus 498 ll~~y~~ 504 (535)
T 2jg0_A 498 MLDLICP 504 (535)
T ss_dssp HHHHHSC
T ss_pred HHHHhhh
Confidence 8776643
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.94 E-value=2.3e-26 Score=251.59 Aligned_cols=230 Identities=16% Similarity=0.152 Sum_probs=167.9
Q ss_pred CCcHHHHHHHHHHHHHHhCChhHHhh--H-----------HHHHHHHHHHHhhhhcCCCCCCceee-eCCCcccccccc-
Q 015270 48 VDSGLWWIILLRAYGKCSGDLLVQER--I-----------DVQTGIKMILKLCLADGFDMFPTLLV-TDGSCMIDRRMG- 112 (410)
Q Consensus 48 VDatLWfi~a~~~Y~~~TgD~~f~~~--~-----------~l~~al~~i~~~~~~~~f~~~~~ll~-~dG~~~~Dr~~~- 112 (410)
.|+++||++++++|+++|||.+|+++ | +++++++|+++.... ++++ ....+|.|. +.
T Consensus 425 ~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~-------~GL~~~~~~DW~D~-~~~ 496 (807)
T 1v7w_A 425 SDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQ-------TGICKGLRADWNDC-LNL 496 (807)
T ss_dssp SSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCT-------TSCBEEETCSSSTT-CCC
T ss_pred cchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCC-------CCCcccCCCCCCCc-CCC
Confidence 39999999999999999999999997 5 388999988763222 2222 222233331 11
Q ss_pred cCCCceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCC
Q 015270 113 IHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIY 192 (410)
Q Consensus 113 ~~G~pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~ 192 (410)
..|++||+|||||+||+.+++|++.+ ++.+.++++.++|++|++.|+++||.++..
T Consensus 497 ~~g~~v~~~a~~y~al~~~a~la~~l-G~~~~a~~~~~~A~~lk~~~~~~~w~~~~~----------------------- 552 (807)
T 1v7w_A 497 GGGESSMVSFLHFWALQEFIDLAKFL-GKDQDVNTYTEMAANVREACETHLWDDEGG----------------------- 552 (807)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHSEETTTT-----------------------
T ss_pred CCCeehhHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCCCCC-----------------------
Confidence 16899999999999999999999985 456667788899999999999999974311
Q ss_pred CCCCCccccccccCCCCccccccCCCccccchhccchhHHHhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCcccCCCcCC
Q 015270 193 PDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEG 272 (410)
Q Consensus 193 ~~~~~~~l~d~v~~~~~y~~~~~rP~~~d~r~~a~gN~LAl~~~ll~~~~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~d 272 (410)
|..+.+..++. ..++... .+.+++..+|.+++++|+++++|++++++.|.+ +|++++|+|+++|+..
T Consensus 553 ------~f~~~~~~d~~-~~g~~~~--~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L~~~~G~~~~~p~~~- 619 (807)
T 1v7w_A 553 ------WYIRGLTKNGD-KIGTAQQ--QEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPYGLHLNAPSFS- 619 (807)
T ss_dssp ------EECCEECTTSC-EESCTTC--SSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETTEECSEESCCC-
T ss_pred ------eeeeeeccCCC-CcCCccC--CCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hcCCCCceeecCCccc-
Confidence 11111111110 0111110 111356788889999999999999999999998 9999999999999742
Q ss_pred CCceeeeCCCCCCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHH
Q 015270 273 QEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVA 323 (410)
Q Consensus 273 ~~y~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~ 323 (410)
.+....++-..+.|..||||++|||.++.++.|+.++|+.++|.+++...
T Consensus 620 -~~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~ 669 (807)
T 1v7w_A 620 -TPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDAL 669 (807)
T ss_dssp -SCCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -ccCcCCceeeccCCccccccccccchHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 11111111234677889999999999999999999999999999988644
No 7
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.82 E-value=2.3e-19 Score=195.29 Aligned_cols=220 Identities=16% Similarity=0.194 Sum_probs=157.0
Q ss_pred CccccCC-cCC-CCcHHHHHHHHHHHHHHhCChhHHhh--HHHHHHHHHHHHhhhhcCCCCCCceeee--CC----Cccc
Q 015270 38 GEAAIGR-VAP-VDSGLWWIILLRAYGKCSGDLLVQER--IDVQTGIKMILKLCLADGFDMFPTLLVT--DG----SCMI 107 (410)
Q Consensus 38 Ge~a~~~-~~s-VDatLWfi~a~~~Y~~~TgD~~f~~~--~~l~~al~~i~~~~~~~~f~~~~~ll~~--dG----~~~~ 107 (410)
|+.|... +++ +|.++||++++++|+++|||.+|+++ |.++++++|+.+.... ++++. .| .+|+
T Consensus 371 g~~p~~~~~~~~~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~~ld~~~~~~d~-------~GL~~~~~G~W~~~dW~ 443 (739)
T 3cih_A 371 GKDPVTSHSNTIMDYTFYWFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYVLGRTNK-------NGMVEGMSGDWVFVDWA 443 (739)
T ss_dssp CCSSCCSSGGGBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTBCT-------TSCBCCCTTCBCCSCCC
T ss_pred cCCCCccccCCccchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC-------CCCcccCCCCcccCCCc
Confidence 4445444 454 79999999999999999999999997 7888888888653222 23322 12 2555
Q ss_pred ccccccCCCceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhh
Q 015270 108 DRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVN 187 (410)
Q Consensus 108 Dr~~~~~G~pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n 187 (410)
|..+...|.++++||+||.||+.+++|++.+ ++.+.++++.+++++|++.|+++||.++++.
T Consensus 444 d~~~~~~G~~~~~~a~~y~al~~~a~lA~~l-G~~~~A~~y~~~A~~lk~a~~~~~wd~~~G~----------------- 505 (739)
T 3cih_A 444 DGYLDKKGELSFEQVLFCRSLETMALCADLV-GDKDGQQKYEKLASALKAKLEPTFWNNQKQA----------------- 505 (739)
T ss_dssp TTCCCCSSEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHEETTTTE-----------------
T ss_pred ccccCCCCcchHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhccCcccCe-----------------
Confidence 5334557889999999999999999999985 4566677888999999999999999743110
Q ss_pred hcCCCCCCCCccccccccCCCCccccccCCCccccchhccchhHHHhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCcccC
Q 015270 188 KFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICY 267 (410)
Q Consensus 188 ~~~~~~~~~~~~l~d~v~~~~~y~~~~~rP~~~d~r~~a~gN~LAl~~~ll~~~~a~~Vl~~v~~~~~~Lltp~GLRsL~ 267 (410)
|..++.+ ++ +.| ..+..+|++|+.+|+++++++++|++.+.. +
T Consensus 506 -----------y~~~~~~-------G~----~~d-~~~~~s~~laL~~Gl~~~e~~~~v~~~L~~-------~------- 548 (739)
T 3cih_A 506 -----------FVHNCVD-------GR----QSD-AVTRYANMFSVFFDYLNADKQQAIKQSVLL-------N------- 548 (739)
T ss_dssp -----------ECSEEET-------TE----ECS-CCCHHHHHHHHHTTCSCHHHHHHHHHHTTT-------C-------
T ss_pred -----------eEeecCC-------CC----cCc-ccchHHhHHHHHHCCCCHHHHHHHHHHHhc-------C-------
Confidence 1111211 11 011 123346789999999999999888876543 1
Q ss_pred CCcCCCCceeeeCCCCCCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHH-HHHHHhcC--CCCCccccCCC
Q 015270 268 PALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQ-VAEKRLSR--DKWPEYYDTKR 340 (410)
Q Consensus 268 P~~~d~~y~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~-~~~~~l~~--~~l~ElFdG~~ 340 (410)
+ ..||+| |||+.++.+.|+.++|+.+.|.+++. .....+.. .++.|.||+..
T Consensus 549 ~-------------------~~~~~~--tp~~~~~~~~aL~~~G~~d~A~~ll~~~w~~~v~~Gattl~E~~~~~~ 603 (739)
T 3cih_A 549 D-------------------EILKIT--TPYMRFYELEALCALGEQETVMKEMKAYWGGMLKAGATSFWEKYNPEE 603 (739)
T ss_dssp T-------------------TSCCCC--SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSSCCSCCCTTC
T ss_pred c-------------------cccccc--chhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCceeEEeccccc
Confidence 0 125776 68999999999999999999999874 33333343 36899999974
No 8
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.74 E-value=2.7e-17 Score=183.70 Aligned_cols=239 Identities=14% Similarity=0.172 Sum_probs=164.7
Q ss_pred CCCCcHHHHHHHHHHHHHHhCChhHHhh--HHHHHHHHHHHHhhhhcCCCCCCceeee-CC---CcccccccccCCCcee
Q 015270 46 APVDSGLWWIILLRAYGKCSGDLLVQER--IDVQTGIKMILKLCLADGFDMFPTLLVT-DG---SCMIDRRMGIHGHPLE 119 (410)
Q Consensus 46 ~sVDatLWfi~a~~~Y~~~TgD~~f~~~--~~l~~al~~i~~~~~~~~f~~~~~ll~~-dG---~~~~Dr~~~~~G~pVE 119 (410)
...|.++||++++++|+++|||.+|+++ |.++++++|+.+.... ++++. .+ .+|.|..-...|.++.
T Consensus 625 ~~~~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~d~-------~GLl~~~~~~~~DW~d~~~~~~G~~~~ 697 (956)
T 2okx_A 625 VIPNWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHIDD-------SGLLNMAGWNLLDWAPIDQPNEGIVTH 697 (956)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTBCT-------TSSBCCSSCCCCCSSSCCCCSSSEEHH
T ss_pred CCcChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCC-------CCCEEeCCCCccCccCCCCCCCCcCHH
Confidence 4568999999999999999999999987 7888888888653222 23322 11 2444421124678999
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCcc
Q 015270 120 IQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPW 199 (410)
Q Consensus 120 INALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~ 199 (410)
.|+++|.||+.+++|++.++. .+.++++.+++++|++.|+++||.++.+ +
T Consensus 698 ~~a~~~~al~~~a~lA~~LG~-~~~a~~y~~~A~~lk~ai~~~~wd~~~g-----------------------------~ 747 (956)
T 2okx_A 698 QNLFLVKALRDSRALAAAAGA-TEEADAFAARADLLAETINAVLWDEEKR-----------------------------A 747 (956)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-GGGGHHHHHHHHHHHHHHHHHSEETTTT-----------------------------E
T ss_pred HHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhcCCCCC-----------------------------E
Confidence 999999999999999998654 4445566788888999999999974311 1
Q ss_pred ccccccCCCCccccccCCCccccchhccchhHHHhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCcccCCCcCCCCceeee
Q 015270 200 LVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIIT 279 (410)
Q Consensus 200 l~d~v~~~~~y~~~~~rP~~~d~r~~a~gN~LAl~~~ll~~~~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~d~~y~~~y 279 (410)
..|.++..+ +|... ....+|++++++|+++++++++| +. |+++.
T Consensus 748 y~d~~~~~g-------~~~~~---~~~~s~~lall~Gl~p~~~~~av-~~-------Ll~~~------------------ 791 (956)
T 2okx_A 748 YIDCIHADG-------RRSDV---YSMQTQVVAYLCGVAQGEREAVI-EG-------YLSSP------------------ 791 (956)
T ss_dssp ECSEECTTS-------CBCCC---CBHHHHHHHHHTTCSCHHHHHHH-HH-------HHHSC------------------
T ss_pred EEeeecCCC-------Ccccc---cccHHHHHHHHhCCCCHHHHHHH-HH-------HhcCC------------------
Confidence 222222111 11111 23457888999999999998877 33 33221
Q ss_pred CCCCCCCCccccc-CCCccchHHHHHHHHHHcCChHHHHHHHH-HHHH--HhcCCCCCccccCCCCCCC---CCCcchHh
Q 015270 280 GSDPKNTPWSYHN-AGSWPTLLWQFTVACIKMNRPEIAARAVQ-VAEK--RLSRDKWPEYYDTKRARFI---GKQAQLFQ 352 (410)
Q Consensus 280 ~g~~~~rp~aYHN-GtVWP~LlG~y~~A~~r~g~~~~A~~~L~-~~~~--~l~~~~l~ElFdG~~g~~~---G~~ac~~Q 352 (410)
|..||+ |++||+ ++++.|+.++|+.+.|.+++. .... .....+++|.||+.++... ++..+..|
T Consensus 792 -------~~gy~~~Gt~w~~--~~li~aLar~G~~d~A~~ll~~~~~~~~~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh 862 (956)
T 2okx_A 792 -------PPAFVQIGSPFMS--FFYYEALEKAGRQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCH 862 (956)
T ss_dssp -------CTTSBCCCSHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCSSCCSSCSSCCTTSSSTTSSCSCSCC
T ss_pred -------CcccccCCChhHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCccceeccCCCCCcccCCCcccccCc
Confidence 346887 999987 889999999999999999884 3322 2233579999999874321 12223469
Q ss_pred HHHHHHHHHHHHHh
Q 015270 353 TWSIAGYLVSKILL 366 (410)
Q Consensus 353 AWSvAe~Lr~~~~l 366 (410)
+||+|....+.+.+
T Consensus 863 ~Wsag~~~~L~q~l 876 (956)
T 2okx_A 863 AWSAAPGYFLGSSI 876 (956)
T ss_dssp GGGCTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh
Confidence 99998866655543
No 9
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.39 E-value=2.9e-12 Score=138.62 Aligned_cols=257 Identities=14% Similarity=0.036 Sum_probs=158.5
Q ss_pred CCCcHHHHHHHHHHHHHHhCChhHHhhHH-HHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHH
Q 015270 47 PVDSGLWWIILLRAYGKCSGDLLVQERID-VQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFY 125 (410)
Q Consensus 47 sVDatLWfi~a~~~Y~~~TgD~~f~~~~~-l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwY 125 (410)
..|++..+++++..| ..+| . .+. ++++++++++.... ++-..|=++ .|.-..+.+..|
T Consensus 394 Q~D~~g~~l~~~~~~-~~~g---~--~~~~v~~al~~i~~~~~~-----------~~~g~WE~~----~g~~~~t~~~~~ 452 (684)
T 1lf6_A 394 QLDEQADPIILSYRL-KRYD---L--YDSLVKPLADFIIKIGPK-----------TGQERWEEI----GGYSPATMAAEV 452 (684)
T ss_dssp CHHHHHHHHHHHHHT-TCGG---G--TTTTHHHHHHHHHHHCSS-----------BSSCTTSSC----CBBCHHHHHHHH
T ss_pred cccchHHHHHHHHHH-HHcC---c--hHHHHHHHHHHHHHhCCC-----------CCccccccc----CCcCHHHHHHHH
Confidence 579999999999844 4555 2 245 99999999775311 111123232 255578889999
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccc-
Q 015270 126 SALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWM- 204 (410)
Q Consensus 126 nAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v- 204 (410)
.||..+++|++.+ ++.+.+.++.+.++.|++.|+++||.++..+ |. . +|....+
T Consensus 453 ~aL~~~a~lA~~~-g~~~~a~~~~~~a~~i~~~i~~~~w~~~~~~-----------g~-----~--------~~f~r~~~ 507 (684)
T 1lf6_A 453 AGLTCAAYIAEQN-KDYESAQKYQEKADNWQKLIDNLTYTENGPL-----------GN-----G--------QYYIRIAG 507 (684)
T ss_dssp HHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHHEESSCSS-----------TT-----S--------CEECSCBS
T ss_pred HHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhccCCCccc-----------cc-----C--------CeeEEEec
Confidence 9999999999985 4566778888889999999999999743000 00 0 0011111
Q ss_pred cCCCC----ccccccCCC-ccccchhccchhHHHhcCCCCHH--HHHHHHHHHHHhhhhhhc--CCC--CcccCCCcCCC
Q 015270 205 PNKGG----YLIGNLQPA-HMDFRFFSLGNIWSIVNGLATRD--QSHAILDLMEAKWADLVA--DMP--LKICYPALEGQ 273 (410)
Q Consensus 205 ~~~~~----y~~~~~rP~-~~d~r~~a~gN~LAl~~~ll~~~--~a~~Vl~~v~~~~~~Llt--p~G--LRsL~P~~~d~ 273 (410)
+..+. +.+.+-.+. ..+..+++ +-++.+.+|+++++ +..+-++.|.+ +|.. +.| ++- ++ .+
T Consensus 508 d~~~~~~~~~~~~~~~~~~~~~~~lDa-s~l~~~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G~~~~R-Y~---~d 579 (684)
T 1lf6_A 508 LSDPDADFMINIANGGGVYDQKEIVDP-SFLELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYR-YN---HD 579 (684)
T ss_dssp SSCTTSCCEEEETTTTEEEEGGGCCCG-GGGHHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECS-ST---TC
T ss_pred cCCCccccccccccccccCCCCCcEeH-HHhHHHhcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEec-cC---CC
Confidence 10000 000000000 00001223 22244578887554 88888888876 5532 222 100 11 11
Q ss_pred CceeeeCCCCCCCCccc-cc--CCCccchHHHHHHHHHHcCChHHHHHHHHHHHHHhc-CCCCCccccCCCCCCCCCCcc
Q 015270 274 EWQIITGSDPKNTPWSY-HN--AGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLS-RDKWPEYYDTKRARFIGKQAQ 349 (410)
Q Consensus 274 ~y~~~y~g~~~~rp~aY-HN--GtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~~l~-~~~l~ElFdG~~g~~~G~~ac 349 (410)
+|... .+...| |+ |++||.....++.++++.|+ +|.+++..+..+-. .+.+||-||+.+|.|.| +|
T Consensus 580 ~y~~~------~~G~~f~~~g~g~~W~~~t~~~a~al~~~G~--~A~~~~~~l~~~a~~~gllpE~~~~~~g~~~G--~a 649 (684)
T 1lf6_A 580 GYGEP------SKTELYHGAGKGRLWPLLTGERGMYEIAAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTD--SA 649 (684)
T ss_dssp CCSCS------BTTBCCSSSSCCCBBHHHHHHHHHHHHHTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCS--SC
T ss_pred CCCcc------cCCCccccCCCCCchHHHHHHHHHHHHHhCh--HHHHHHHHHHHhcccCCccCeeecCCCCCCCC--CC
Confidence 22111 122333 34 89999999999999999997 78888865555433 46889999999887655 46
Q ss_pred hHhHHHHHHHHHHHHHhc
Q 015270 350 LFQTWSIAGYLVSKILLA 367 (410)
Q Consensus 350 ~~QAWSvAe~Lr~~~~l~ 367 (410)
.+||||.|++|.+...|.
T Consensus 650 ~PqaWSha~~i~~~~~l~ 667 (684)
T 1lf6_A 650 SPLNWAHAEYVILFASNI 667 (684)
T ss_dssp SSCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHh
Confidence 799999999999887664
No 10
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.30 E-value=2e-11 Score=137.18 Aligned_cols=257 Identities=12% Similarity=0.050 Sum_probs=155.6
Q ss_pred CCCcHHHHHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHHH
Q 015270 47 PVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYS 126 (410)
Q Consensus 47 sVDatLWfi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwYn 126 (410)
..|.+.++++++.+|.+ + |..++. ..++++++++.++.. .++-..|=++ .|+-...+++.|.
T Consensus 384 Q~D~~g~~l~~~~~~~~-~-d~~~w~-~~v~~al~~i~~~g~-----------~~~~~~WEe~----~g~~~~t~~~~~~ 445 (1020)
T 1ulv_A 384 QLDETAFPILLANQIGR-T-DAGFYR-NELKPAADYLVAAGP-----------KTPQERWEET----GGYSTSTLASQIA 445 (1020)
T ss_dssp BTHHHHHHHHHHHHHTC-C-CHHHHH-HTHHHHHHHHHHHCS-----------CBSBCTTSSC----CBEEHHHHHHHHH
T ss_pred cCccchHHHHHHHHHHh-c-CHHHHH-HHHHHHHHHHHHhCC-----------CCChhhhccc----CCcCHHHHHHHHH
Confidence 67999999999999875 4 544332 168999999976421 1111124343 3567788999999
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccC
Q 015270 127 ALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPN 206 (410)
Q Consensus 127 AL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~ 206 (410)
||+.+++|++.+ ++.+.++++.+.++.|++.|+++||.++.-+ .. .+ . |..-..+.
T Consensus 446 AL~~aa~lA~~~-G~~~~a~~w~~~Ad~i~~~i~~~~w~~~g~~-~~-------~g-----~----------f~r~~~dg 501 (1020)
T 1ulv_A 446 ALAAAADIAGKN-GDAGSAAVYRATADEWQRSTEKWMFTTNGPV-GD-------GK-----Y----------YLRISATG 501 (1020)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHTHHHHHEESSCSS-TT-------SC-----E----------ECSEESSS
T ss_pred HHHHHHHHHHHc-CChhHHHHHHHHHHHHHHHHHHhCCCCcccc-cc-------cC-----e----------eEEEecCC
Confidence 999999999985 4566778888899999999999999753000 00 00 0 00000000
Q ss_pred CC----CccccccCCCc-cccchhccchhHH-HhcCCCCHH--HHHHHHHHHHHhhhhhh--cCCCCcccCCCcCCCCce
Q 015270 207 KG----GYLIGNLQPAH-MDFRFFSLGNIWS-IVNGLATRD--QSHAILDLMEAKWADLV--ADMPLKICYPALEGQEWQ 276 (410)
Q Consensus 207 ~~----~y~~~~~rP~~-~d~r~~a~gN~LA-l~~~ll~~~--~a~~Vl~~v~~~~~~Ll--tp~GLRsL~P~~~d~~y~ 276 (410)
++ ...+.+-++.. .+..+++ ++|. +.+|+++++ +..+-++.|++ .|. ++.| |
T Consensus 502 ~~~~~~~~~~~n~~~~~~~~~~lDa--s~l~l~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G------------~- 563 (1020)
T 1ulv_A 502 NPNDGATRDWGNGAGVHPENAVLDG--GFLEFVRLGVKAPADPYVADSLAETDA---SISQETPGG------------R- 563 (1020)
T ss_dssp CTTSCCEEECSTTCCEEEGGGCCBG--GGGHHHHTTSSCTTCHHHHHHHHHHHH---HHEEEETTE------------E-
T ss_pred CcccccccccccccccCCCCCeeeH--HHHHHHHhCCCCCCcHHHHHHHHHHHH---HhcccCCCC------------c-
Confidence 00 00000000000 0001221 2322 358886554 66667777775 543 1222 1
Q ss_pred eeeCCCCCCCCcccc------------cCCCccchHHHHHHHHHHcCChHHHHHHHHHHHHHhc-CCCCCccccC-CCCC
Q 015270 277 IITGSDPKNTPWSYH------------NAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLS-RDKWPEYYDT-KRAR 342 (410)
Q Consensus 277 ~~y~g~~~~rp~aYH------------NGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~~l~-~~~l~ElFdG-~~g~ 342 (410)
+-.+|++.+|| .|++||....-++.++++.|+ +|.++++.+..+-. .+.+||.||. .+.+
T Consensus 564 ----~~~RY~~D~Y~~~~dG~~~~~~g~g~~W~l~T~wlae~~~~~G~--~A~~~~~~l~~~a~~~GllpEq~~~g~~~~ 637 (1020)
T 1ulv_A 564 ----MWHRYTYDGYGEKADGSPWDGTGIGRLWPLLSGERGEYALANGQ--DALPYLETMHSAANAGYMIPEQVWDRDEPT 637 (1020)
T ss_dssp ----EECSBTTCCCSCCTTSCCCSSCCCCCBCTHHHHHHHHHHHHTTC--CCHHHHHHHHHTSCTTCCCCSCBBCCSSCC
T ss_pred ----eeecCCccccccccCCCcccCCCCCChHHHHHHHHHHHHHHhhH--HHHHHHHHHHHhccccCCcceeeccccccc
Confidence 11233344454 378999888888999999887 67777765555433 4679999995 2110
Q ss_pred ----CCCC-C-cchHhHHHHHHHHHHHHHhcCC
Q 015270 343 ----FIGK-Q-AQLFQTWSIAGYLVSKILLADP 369 (410)
Q Consensus 343 ----~~G~-~-ac~~QAWSvAe~Lr~~~~l~~p 369 (410)
+.|. . +|.+||||.|++|.+.+.+.+.
T Consensus 638 ~~~~~tG~p~~g~~PqaWSha~~I~~~~~l~~~ 670 (1020)
T 1ulv_A 638 SYGHELGRSTGSASPLSWAMAQYVRLAAGVKAG 670 (1020)
T ss_dssp SSCCCBTSBCSSCBSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCcCCccccCCcHHHHHHHHHHHHHHHHhCC
Confidence 1222 2 7999999999999988876544
No 11
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.04 E-value=1.8e-09 Score=111.93 Aligned_cols=256 Identities=14% Similarity=0.100 Sum_probs=160.1
Q ss_pred CCCCcHHHHHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhc----C------CCCC---Cce-eeeC--CCccc--
Q 015270 46 APVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLAD----G------FDMF---PTL-LVTD--GSCMI-- 107 (410)
Q Consensus 46 ~sVDatLWfi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~----~------f~~~---~~l-l~~d--G~~~~-- 107 (410)
.-+|++=-+|.++++|++.|||.+|+.+ ...++++.|++....+ + |... ++- +..+ |.++-
T Consensus 177 yElDSla~~L~la~~Yy~~TgD~~~f~~-~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~t 255 (489)
T 2p0v_A 177 WEIDSLCYPIRLAYHYWKTTGDASVFSD-EWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPV 255 (489)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCTTSSH-HHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCS
T ss_pred chhhhhHHHHHHHHHHHHHhCCchhhHH-HHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCC
Confidence 4789999999999999999999999975 4556666666655331 1 1000 000 1111 22211
Q ss_pred ------cccc---ccCCCceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 015270 108 ------DRRM---GIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKT 178 (410)
Q Consensus 108 ------Dr~~---~~~G~pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~ 178 (410)
-|+- .+.|+-+--|+..|-+|+.++++++.++++.+.++++.+.++.+++.+.++.|++......+|.|..
T Consensus 256 GLi~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEV 335 (489)
T 2p0v_A 256 GLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYAVCNHPKYGKIYAFEV 335 (489)
T ss_dssp SCCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEE
T ss_pred CceeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCccEEEEEe
Confidence 1111 2378999999999999999999998877677778788888888888888888764311122333332
Q ss_pred cchhhhhhhhcCCCCCCCCccccccccCCCCcc--ccccCCCccccchhccchhHHH-hcCCCCH--HHHHHHHHHHHHh
Q 015270 179 EEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYL--IGNLQPAHMDFRFFSLGNIWSI-VNGLATR--DQSHAILDLMEAK 253 (410)
Q Consensus 179 e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~--~~~~rP~~~d~r~~a~gN~LAl-~~~ll~~--~~a~~Vl~~v~~~ 253 (410)
+. -|++. |+. +.+.+|++ .+|.++. +.-+.-.+.|++
T Consensus 336 DG--------------------------~G~~~~mDDa-----------nvpSLLslPylG~~~~dDpiy~nTr~~IlS- 377 (489)
T 2p0v_A 336 DG--------------------------FGNQLLMDDA-----------NVPSLIALPYLGDVKVTDPIYQNTRKFVWS- 377 (489)
T ss_dssp CS--------------------------SSCEECCCCS-----------SSSCSTTHHHHTSSCTTCHHHHHHHHHHTS-
T ss_pred cC--------------------------CCCcccCCCC-----------CccHHHHHHHhCCCCCCCHHHHHHHHHHHh-
Confidence 22 22211 111 11223444 5666543 455555566654
Q ss_pred hhhhhcCCCCcccCCCcCCCCceeeeC---CCCCCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHHHH-HhcC
Q 015270 254 WADLVADMPLKICYPALEGQEWQIITG---SDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEK-RLSR 329 (410)
Q Consensus 254 ~~~Lltp~GLRsL~P~~~d~~y~~~y~---g~~~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~-~l~~ 329 (410)
++ .||..+ +.+. |++ |-|.-.||.++.++.| +..++.+++++.|..... ....
T Consensus 378 --~~-NPyy~~------------G~~~~GIGsp-------H~~~~~~Wpmsll~~a-lts~d~~E~~~~L~~l~~t~~gt 434 (489)
T 2p0v_A 378 --ED-NPYFFK------------GSAGEGIGGP-------HIGYDMIWPMSIMMKA-FTSQNDAEIKTCIKMLMDTDAGT 434 (489)
T ss_dssp --TT-STTEEE------------CSSCEEECCT-------TTCTTEECHHHHHHHH-HTCCCHHHHHHHHHHHHHTSTTS
T ss_pred --hc-CCcccc------------cccccCCCCC-------CCCCCchHHHHHHHHH-HhcCCHHHHHHHHHHHHhhCCCC
Confidence 33 233322 2211 222 6665667777888888 557889999999976544 4556
Q ss_pred CCCCccccCCCCCCCCCCcchHhHHHHHHHHHHHHHh
Q 015270 330 DKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILL 366 (410)
Q Consensus 330 ~~l~ElFdG~~g~~~G~~ac~~QAWSvAe~Lr~~~~l 366 (410)
|-++|=||.+++.+.- + ...|||-+.+..+...+
T Consensus 435 GLmhEs~d~~~~~~~T-R--~wFaWanslF~e~il~l 468 (489)
T 2p0v_A 435 GFMHESFNKNDPKNFT-R--AWFAWQNTLFGELILKL 468 (489)
T ss_dssp CSCCSEEETTEEEEEE-C--SCBHHHHHHHHHHHHHH
T ss_pred CeeeeeECCCCCCcCC-C--cccHHHHHHHHHHHHHH
Confidence 7789999999875432 2 49999999977766544
No 12
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=98.85 E-value=2.3e-08 Score=103.00 Aligned_cols=261 Identities=12% Similarity=0.079 Sum_probs=164.9
Q ss_pred cCCCCcHHHHHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhc-CCC-CCC----------ce-eeeC--CCccc--
Q 015270 45 VAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLAD-GFD-MFP----------TL-LVTD--GSCMI-- 107 (410)
Q Consensus 45 ~~sVDatLWfi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~-~f~-~~~----------~l-l~~d--G~~~~-- 107 (410)
..-+|+--.|+-+.++|++.|||.+|+.+ ...+|++.|++....+ ..+ ..+ +- +..+ |.++-
T Consensus 159 KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~t 237 (463)
T 3p2c_A 159 KWEIDSLCYPLRLAYHYWKTTGDASIFNE-EWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPV 237 (463)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCS
T ss_pred ecHhhhhhHHHHHHHHHHHhhCChhhhcH-HHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCC
Confidence 46789999999999999999999999965 6888888887765432 111 000 00 1111 33221
Q ss_pred ------cccc---ccCCCceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 015270 108 ------DRRM---GIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKT 178 (410)
Q Consensus 108 ------Dr~~---~~~G~pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~ 178 (410)
=||- -..|+.|--|+...-+|+.+++|+..+.++.+.++++.+.++.+++.+.++.+++....-.+|.|..
T Consensus 238 Gli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEV 317 (463)
T 3p2c_A 238 GLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEV 317 (463)
T ss_dssp SCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEE
T ss_pred CceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEE
Confidence 0111 1378999999999999999999998766778888888888888999999888775322223444333
Q ss_pred cchhhhhhhhcCCCCCCCCccccccccCCCCcc--ccccCCCccccchhccchhHHH-hcCCCCH--HHHHHHHHHHHHh
Q 015270 179 EEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYL--IGNLQPAHMDFRFFSLGNIWSI-VNGLATR--DQSHAILDLMEAK 253 (410)
Q Consensus 179 e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~--~~~~rP~~~d~r~~a~gN~LAl-~~~ll~~--~~a~~Vl~~v~~~ 253 (410)
+.+ |++. |+. +.+.+|++ .+|.++. +.-+.-.+.|++
T Consensus 318 DG~--------------------------Gs~~lmDDa-----------NvPSLLslPylGf~~~dDpiYqNTrk~IlS- 359 (463)
T 3p2c_A 318 DGF--------------------------GNHHLMDDA-----------NVPSLLAMPYLGDVNVNDPIYQNTRRFVWS- 359 (463)
T ss_dssp CSS--------------------------SCEECCCCS-----------SSSCSTTHHHHTSSCTTCHHHHHHHHHHTS-
T ss_pred ecC--------------------------CCccCCCCC-----------CchhHHHHHHcCCCCCCCHHHHHHHHHHHh-
Confidence 332 2221 111 12334455 5666544 333333344433
Q ss_pred hhhhhcCCCCcccCCCcCCCCceeeeCCCCCCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHHHH-HhcCCCC
Q 015270 254 WADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEK-RLSRDKW 332 (410)
Q Consensus 254 ~~~Lltp~GLRsL~P~~~d~~y~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~-~l~~~~l 332 (410)
+ ..|-| +.|....--.+-|.|.-.||.++.++.+ +..++.+++++.|....+ ....|-+
T Consensus 360 --------------~--~NPyY---~~G~~~~GiG~PH~~~~~~Wpmsll~~~-lTs~d~~Ei~~~L~~l~~t~~gtGlm 419 (463)
T 3p2c_A 360 --------------E--DNPYF---FKGKAGEGIGGPHIGYDMVWPMSIMMKA-FTSQNDAEIKTCIKMLMDTDAGTGFM 419 (463)
T ss_dssp --------------T--TSTTE---EECSSCEEECCTTTCTTEECHHHHHHHH-HTCCCHHHHHHHHHHHHHTSTTSSSC
T ss_pred --------------c--cCCce---eccCccccCCCCCCCCCCchHHHHHHHH-hccCCHHHHHHHHHHHHhcCCCCCee
Confidence 2 12222 2222222233558888888888888663 345678899999976555 4456778
Q ss_pred CccccCCCCCCCCCCcchHhHHHHHHHHHHHHHhc
Q 015270 333 PEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLA 367 (410)
Q Consensus 333 ~ElFdG~~g~~~G~~ac~~QAWSvAe~Lr~~~~l~ 367 (410)
.|=||.+++...- + ...|||=+++..+...+.
T Consensus 420 HEsvd~~~~~~~T-R--~WFaWaNs~F~elil~l~ 451 (463)
T 3p2c_A 420 HESFHKDNPKKFT-R--AWFAWQNTLFGELILKLV 451 (463)
T ss_dssp CSEEETTEEEEEE-C--SCBHHHHHHHHHHHHHHH
T ss_pred eeeECCCCCCcCC-C--CchhhhhHHHHHHHHHHH
Confidence 9999999875322 2 499999999776654443
No 13
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.57 E-value=7.7e-07 Score=90.88 Aligned_cols=262 Identities=15% Similarity=0.121 Sum_probs=161.6
Q ss_pred CCcCCCCcHHHHHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhcC---------CCCC---Cc-eeeeC--CCccc
Q 015270 43 GRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADG---------FDMF---PT-LLVTD--GSCMI 107 (410)
Q Consensus 43 ~~~~sVDatLWfi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~~---------f~~~---~~-ll~~d--G~~~~ 107 (410)
.+..-+|+--.|+-+.+.|++.|||.+|+.+ ...+|++.|++....+. |... ++ -+..+ |.++-
T Consensus 129 ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~ 207 (427)
T 3qt9_A 129 ERKYEIDSLCYPVRLIHKYWKESGDETFFNY-DIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVT 207 (427)
T ss_dssp ECCCCTHHHHHHHHHHHHHHHHHCCCTTCCH-HHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCC
T ss_pred eeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcC
Confidence 3446799999999999999999999999975 67788888876653221 2100 00 01111 33221
Q ss_pred --------cccc---ccCCCceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q 015270 108 --------DRRM---GIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRY 176 (410)
Q Consensus 108 --------Dr~~---~~~G~pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~ 176 (410)
=||- -..|+.|--|+...-||+.+++|+..+.++.+.++++.+.++.+++.+.++..++....-.+|+|
T Consensus 208 ~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAy 287 (427)
T 3qt9_A 208 YTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAY 287 (427)
T ss_dssp CCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECS
T ss_pred CCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEE
Confidence 0111 13789999999999999999999987666777787888888888888888887653333334444
Q ss_pred cccchhhhhhhhcCCCCCCCCccccccccCCCCccccccCCCccccchhccchhHHH-hcCCCCH--HHHHHHHHHHHHh
Q 015270 177 KTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSI-VNGLATR--DQSHAILDLMEAK 253 (410)
Q Consensus 177 ~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~~~~~rP~~~d~r~~a~gN~LAl-~~~ll~~--~~a~~Vl~~v~~~ 253 (410)
..+.+| ++.+ +| --+.+.+|++ .+|.++. +.-+.-.+.|++
T Consensus 288 EVDG~G--------------------------s~~l-------MD--DaNvPSLLslPylGf~~~dDpiYqNTrk~IlS- 331 (427)
T 3qt9_A 288 ETDGMG--------------------------NYNF-------MD--DANVPSLLSIPYLEYKGIEDEVYQNTRKFILS- 331 (427)
T ss_dssp EECSSS--------------------------CEEC-------CC--CSSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS-
T ss_pred EeccCC--------------------------Cccc-------cC--CCCchhHHHHHHcCCCCCCCHHHHHHHHHHhc-
Confidence 433322 2210 01 0112334455 4666443 333333444443
Q ss_pred hhhhhcCCCCcccCCCcCCCCceeeeCCCCCCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHHHH-HhcCCCC
Q 015270 254 WADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEK-RLSRDKW 332 (410)
Q Consensus 254 ~~~Lltp~GLRsL~P~~~d~~y~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~-~l~~~~l 332 (410)
+ ..|-| +.|....--.+-|.|.-.||.++.++.++ ..++.+++++.|..... ..+.|-+
T Consensus 332 --------------~--~NPyy---~~G~~~~GIG~PH~~~~~~Wpmsl~~~~l-Ts~d~~Ei~~~L~~l~~t~~gtGlm 391 (427)
T 3qt9_A 332 --------------K--NNRFF---FEGKAAKGIGSPHTPDQYIWHIALSMQGL-TTNNQEEIDQLIKLLKETDAGTGYM 391 (427)
T ss_dssp --------------T--TSTTE---EECSSCEEECCTTSCTTEEEHHHHHHHHH-TCCCHHHHHHHHHHHHHTSTTSSSC
T ss_pred --------------c--cCCce---eccCccCcCCCCCCCCCCchHHHHHHHHh-hcCCHHHHHHHHHHHHhcCCCCCee
Confidence 2 12222 12222222345599887888888875544 34678888888876545 4456778
Q ss_pred CccccCCCCCCCCCCcchHhHHHHHHHHHHHH
Q 015270 333 PEYYDTKRARFIGKQAQLFQTWSIAGYLVSKI 364 (410)
Q Consensus 333 ~ElFdG~~g~~~G~~ac~~QAWSvAe~Lr~~~ 364 (410)
.|=||-+++... .+ ..+||+=+.+-.+..
T Consensus 392 HEsvd~~~~~~~-TR--~WFaWaN~lF~elil 420 (427)
T 3qt9_A 392 HEGFHVDDPTKF-TR--DWFAWSNSLFSHFIY 420 (427)
T ss_dssp CSEEETTEEEEE-SC--SCBHHHHHHHHHHHH
T ss_pred eeeECCCCCCcc-CC--CcchhhhHHHHHHHH
Confidence 999999986522 22 489999988655443
No 14
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=98.41 E-value=3e-06 Score=86.58 Aligned_cols=261 Identities=14% Similarity=0.053 Sum_probs=158.4
Q ss_pred CCcCCCCcHHHHHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhcC-CCCCC----------c-eeeeC--CCccc-
Q 015270 43 GRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADG-FDMFP----------T-LLVTD--GSCMI- 107 (410)
Q Consensus 43 ~~~~sVDatLWfi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~~-f~~~~----------~-ll~~d--G~~~~- 107 (410)
.+..-+|+--.|+-+.+.|++.|||.+|+.+ ...+|++.|++....+. ....+ + -+..+ |.++-
T Consensus 128 E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~ 206 (426)
T 3qry_B 128 ERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IFVAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAV 206 (426)
T ss_dssp ECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCC
T ss_pred eeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCC
Confidence 3346789999999999999999999999976 68888888877654321 10000 0 01111 33221
Q ss_pred -------cccc---ccCCCceehhHHHHHHHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 015270 108 -------DRRM---GIHGHPLEIQALFYSALLCAREMLA--PEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYR 175 (410)
Q Consensus 108 -------Dr~~---~~~G~pVEINALwYnAL~~~~~La~--~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~ 175 (410)
=||- -..|+.|--|+...-+|+.+++|+. ...++.+.++++.+.++.+++.+.++..++....-.+|+
T Consensus 207 tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyA 286 (426)
T 3qry_B 207 TGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYA 286 (426)
T ss_dssp CSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEEC
T ss_pred CCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEE
Confidence 0111 1378999999999999999999997 334556667777777778888888887765433334444
Q ss_pred hcccchhhhhhhhcCCCCCCCCccccccccCCCCccccccCCCccccchhccchhHHH-hcCCCCH--HHHHHHHHHHHH
Q 015270 176 YKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSI-VNGLATR--DQSHAILDLMEA 252 (410)
Q Consensus 176 ~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~~~~~rP~~~d~r~~a~gN~LAl-~~~ll~~--~~a~~Vl~~v~~ 252 (410)
|..+.+| ++.+ +| --+.+.+|++ .+|.++. +.-+.-.+.|++
T Consensus 287 yEVDG~G--------------------------s~~l-------mD--DaNvPSLLslPylGf~~~dDpiYqNTrk~IlS 331 (426)
T 3qry_B 287 FEVDGLG--------------------------NASI-------MD--DPNVPSLLAAPYLGYCSVDDEVYQATRRTILS 331 (426)
T ss_dssp SEECSSS--------------------------CBCC-------CC--CSSSSCSTTTTTTTSSCTTCHHHHHHHHHHTS
T ss_pred EEeccCC--------------------------Cccc-------cC--CCCchhHHHHHHcCCCCCCCHHHHHHHHHHhc
Confidence 4433333 2210 01 0112334444 4566443 333333444443
Q ss_pred hhhhhhcCCCCcccCCCcCCCCceeeeCCCCCCCCcccccCCCccchHHHHHHHHHHcCChHHHHHHHHHHHH-HhcCCC
Q 015270 253 KWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEK-RLSRDK 331 (410)
Q Consensus 253 ~~~~Lltp~GLRsL~P~~~d~~y~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r~g~~~~A~~~L~~~~~-~l~~~~ 331 (410)
++ .|-| +.|....--.+-|.|.-.||.++.++.++-. ++.+++++.|..... ..+.|-
T Consensus 332 ---~~--------------NPyy---~~G~~~~GiG~PH~~~~~~Wpmsl~~~~lTs-~d~~Ei~~~L~~l~~t~~gtGl 390 (426)
T 3qry_B 332 ---SE--------------NPYF---YQGEYASGLGSSHTFYRYIWPIALSIQGLTT-RDKAEKKFLLDQLVACDGGTGV 390 (426)
T ss_dssp ---TT--------------STTE---EECSSCEEECCTTSCTTEECHHHHHHHHHTC-SCHHHHHHHHHHHHHTSTTSSS
T ss_pred ---cc--------------CCce---eccCccCcCCCCCCCCCCchHHHHHHHHHhC-CCHHHHHHHHHHHHhcCCCCCe
Confidence 21 2222 1222222233558888778877887666554 567888888876544 445677
Q ss_pred CCccccCCCCCCCCCCcchHhHHHHHHHHHHH
Q 015270 332 WPEYYDTKRARFIGKQAQLFQTWSIAGYLVSK 363 (410)
Q Consensus 332 l~ElFdG~~g~~~G~~ac~~QAWSvAe~Lr~~ 363 (410)
+.|=||-+++... .| ..+||+=+.+-.+.
T Consensus 391 mHEsvd~~~~~~~-TR--~WFaWaN~lF~eli 419 (426)
T 3qry_B 391 MHESFHVDDPTLY-SR--EWFSWANMMFCELV 419 (426)
T ss_dssp CCSEEETTEEEEE-EC--SCCHHHHHHHHHHH
T ss_pred eeeeECCCCCCcc-CC--CchhhhhHHHHHHH
Confidence 8999999986422 22 48999988865443
No 15
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=98.30 E-value=3.1e-05 Score=80.82 Aligned_cols=252 Identities=13% Similarity=0.082 Sum_probs=144.5
Q ss_pred CCCcHHHHHHHHHHHHHHhCChhHH---------------h---hHHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccc
Q 015270 47 PVDSGLWWIILLRAYGKCSGDLLVQ---------------E---RIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMID 108 (410)
Q Consensus 47 sVDatLWfi~a~~~Y~~~TgD~~f~---------------~---~~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~D 108 (410)
.-|.+-+.++++.+|.+...+.... + .+.+++.++++.+......+ +-|=.
T Consensus 143 Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~pd~-----------dlWEe 211 (492)
T 2fba_A 143 QNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGF-----------DLWEE 211 (492)
T ss_dssp BTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSCEE-----------CTTSC
T ss_pred cccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCCCC-----------CCcCc
Confidence 4599999999999987665333221 1 13466666666543222112 12211
Q ss_pred cccccCCCceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhhcccchhhhh
Q 015270 109 RRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREY---YWIDLRKLNEIYRYKTEEYSYDA 185 (410)
Q Consensus 109 r~~~~~G~pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~---FW~~~~~~~~~~~~~~e~~~~~~ 185 (410)
+ .|.-....+--+.||..+++|++.+ ++.....++.+.++.+++.+..+ ||.+.++.+.
T Consensus 212 r----~g~~~~T~~~~~~AL~~aa~lA~~~-g~~~~a~~w~~~ad~i~~~I~~~~~~~w~~~~~~f~------------- 273 (492)
T 2fba_A 212 N----QGRHFFTSLVQQKALAYAVDIAKSF-DDGDFANTLSSTASTLESYLSGSDGGFVNTDVNHIV------------- 273 (492)
T ss_dssp C----EECCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHSTTTCCEETTTTEEC-------------
T ss_pred c----CCCChHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEE-------------
Confidence 1 1455678899999999999999985 45666777777788889989888 9864211000
Q ss_pred hhhcCCCCCCCCccccccccCCCCccccccCCCccccchhccchhHHH-hcC-------C--CCHHHHHHHHHHHHHhhh
Q 015270 186 VNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSI-VNG-------L--ATRDQSHAILDLMEAKWA 255 (410)
Q Consensus 186 ~n~~~~~~~~~~~~l~d~v~~~~~y~~~~~rP~~~d~r~~a~gN~LAl-~~~-------l--l~~~~a~~Vl~~v~~~~~ 255 (410)
. .++.++. + ....+|..+. ++++ -|+ + .+.++..+-++.|++
T Consensus 274 -~------------~~~~~~~-~-------~~~~lDas~L----l~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~--- 325 (492)
T 2fba_A 274 -E------------NPDLLQQ-N-------SRQGLDSATY----IGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLE--- 325 (492)
T ss_dssp -S------------SHHHHHT-T-------SCCSCCTHHH----HHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHH---
T ss_pred -E------------ecccccc-C-------CCCcccHHHH----HHHHhccccccccCCccCCCCHHHHHHHHHHHH---
Confidence 0 0000000 0 0112442111 1121 232 2 244566666677776
Q ss_pred hhhcCCCCcccCCCcCCCCceeeeCCCCCCCCcccc-----cCCCccchHHHHHH----HH----HHcC-----------
Q 015270 256 DLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYH-----NAGSWPTLLWQFTV----AC----IKMN----------- 311 (410)
Q Consensus 256 ~Lltp~GLRsL~P~~~d~~y~~~y~g~~~~rp~aYH-----NGtVWP~LlG~y~~----A~----~r~g----------- 311 (410)
+|...+|+..=-+ ..+ --.||.++. |. .|+.|+-...-++. |+ .+.|
T Consensus 326 ~L~~~~pin~~~~--~g~-~v~RY~~D~------y~g~~~~~g~pw~lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f 396 (492)
T 2fba_A 326 DNKDRYSVNSAYS--AGA-AIGRYPEDV------YNGDGSSEGNPWFLATAYAAQVPYKLAYDAKSASNDITINKINYDF 396 (492)
T ss_dssp HHHHHCGGGTTCS--SCC-CCCSCTTCC------BCSSSBSSCCCBHHHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHH
T ss_pred HHhcccCccccCc--cee-EEEeCCCCC------CCCCCccCCCcHHHHHHHHHHHHHHHHHHHHHhcCceecchhhHHH
Confidence 6654443320000 011 224444432 33 37888766655555 33 2444
Q ss_pred --------------C----------------------hHHHHHHHHHHHHHhc-CCCCCccccCCCCCCCCCCcchHhHH
Q 015270 312 --------------R----------------------PEIAARAVQVAEKRLS-RDKWPEYYDTKRARFIGKQAQLFQTW 354 (410)
Q Consensus 312 --------------~----------------------~~~A~~~L~~~~~~l~-~~~l~ElFdG~~g~~~G~~ac~~QAW 354 (410)
+ .+.|+.+++.+..+-. .|.+||=||..+|.+.| ..+|||
T Consensus 397 ~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~~~l~~~~~~~~~~GllsEq~d~~tG~~~g---a~Pltw 473 (492)
T 2fba_A 397 FNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQVILDHINDDGSLNEQLNRYTGYSTG---AYSLTW 473 (492)
T ss_dssp HHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCCSEECTTTCCEES---STTCHH
T ss_pred HHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccccCCCCCCCCC---ccchHH
Confidence 3 4578888876666554 47789999999988766 459999
Q ss_pred HHHHHHHHHHHhc
Q 015270 355 SIAGYLVSKILLA 367 (410)
Q Consensus 355 SvAe~Lr~~~~l~ 367 (410)
|-+++|.+...++
T Consensus 474 Sha~li~aa~~~~ 486 (492)
T 2fba_A 474 SSGALLEAIRLRN 486 (492)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999877654
No 16
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=98.24 E-value=6.7e-05 Score=78.00 Aligned_cols=238 Identities=12% Similarity=0.063 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---HHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHHHH
Q 015270 51 GLWWIILLRAYGKCSGDLLVQER---IDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSA 127 (410)
Q Consensus 51 tLWfi~a~~~Y~~~TgD~~f~~~---~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwYnA 127 (410)
+-..+++.+ +..+|+..+++. +.+++.++++.+.-....+ +-|=.+ .|.-....+.-+-|
T Consensus 132 ~~~~~~~~~--l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~pd~-----------dlWEer----~g~~~~T~~~~~~A 194 (472)
T 1gai_A 132 TAMIGFGQW--LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQTGY-----------DLWEEV----NGSSFFTIAVQHRA 194 (472)
T ss_dssp HHHHHHHHH--HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTSCEE-----------CTTSCC----EEEEHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHcCCccccchhHHHHHHHHHHHHHHhcCCCCC-----------CCCccc----CCCCHHHHHHHHHH
Confidence 344566664 667888776653 4566666666543222111 122111 24566788999999
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccCC
Q 015270 128 LLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNK 207 (410)
Q Consensus 128 L~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~ 207 (410)
|..+++|++.++.+. .+..+.+..++..+ ++||.. . | +.-+.+.
T Consensus 195 L~~aa~lA~~~g~~~---~~w~~~ad~I~~~i-~~~w~g------~---------------f----------~~~~~~~- 238 (472)
T 1gai_A 195 LVEGSAFATAVGSSC---SWCDSQAPQILCYL-QSFWTG------S---------------Y----------ILANFDS- 238 (472)
T ss_dssp HHHHHHHHHHTTCCC---HHHHHHHHHHHHHH-GGGBCS------S---------------S----------BCSEESC-
T ss_pred HHHHHHHHHHcCCcH---HHHHHHHHHHHHHH-HhhcCC------c---------------e----------EEeecCC-
Confidence 999999998866553 34456666778888 889841 0 0 0000000
Q ss_pred CCccccccCCCccccchhccchhHHHhcCC------------CCHHHHHHHHHHHHHhhhhhhcCCCCcccCCCcCCCCc
Q 015270 208 GGYLIGNLQPAHMDFRFFSLGNIWSIVNGL------------ATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEW 275 (410)
Q Consensus 208 ~~y~~~~~rP~~~d~r~~a~gN~LAl~~~l------------l~~~~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~d~~y 275 (410)
-+ ..+|.. . +|+..++. .+.++..+-++.|++ +|..-|++..=-|.-..+ -
T Consensus 239 -------~~-~~lDas--~---LL~~~~~f~p~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~y~i~~~~~~g~g~-~ 301 (472)
T 1gai_A 239 -------SR-SGKDTN--T---LLGSIHTFDPEAGCDDSTFQPCSPRALANHKEVVD---SFRSIYTLNDGLSDSEAV-A 301 (472)
T ss_dssp -------CS-CCCCTH--H---HHHHHTTCCTTCCSCTTTTCTTSHHHHHHHHHHHH---TTTTTCGGGTTCCTTSCC-C
T ss_pred -------CC-CCcCHH--H---HHhhhccCCccccccccCCCCCCHHHHHHHHHHHH---HHHHhcCcCCCCcCcccc-e
Confidence 00 123311 1 12221221 145566666777766 554223222100000001 2
Q ss_pred eeeeCCCCCCCCcccccCCCccchHHHHHHHHHH-----------------------------cC----------ChHH-
Q 015270 276 QIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIK-----------------------------MN----------RPEI- 315 (410)
Q Consensus 276 ~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r-----------------------------~g----------~~~~- 315 (410)
-.||..+ .|..|+.|.--..-++.++.+ .| +..+
T Consensus 302 v~RY~~D------~y~gg~pw~lcT~wlae~l~~a~~~~~~~~~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~ 375 (472)
T 1gai_A 302 VGRYPED------SYYNGNPWFLCTLAAAEQLYDALYQWDKQGSLEITDVSLDFFKALYSGAATGTYSSSSSTYSSIVSA 375 (472)
T ss_dssp CCSCTTC------CGGGSCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHCTTCCSEEEETTSHHHHHHHHH
T ss_pred EEeCCCC------CCCCCCcHHHHHHHHHHHHHHHHHHhhccCceeecchhHHHHHhhcccccccccccCchhHHHHHHH
Confidence 2444433 456699887776667766553 34 3334
Q ss_pred ----HHHHHHHHHHHhc-CCCCCccccCCCCCCCCCCcchHhHHHHHHHHHHHHHhc
Q 015270 316 ----AARAVQVAEKRLS-RDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLA 367 (410)
Q Consensus 316 ----A~~~L~~~~~~l~-~~~l~ElFdG~~g~~~G~~ac~~QAWSvAe~Lr~~~~l~ 367 (410)
|+.+++.+..+-. .+-+||=||..+|.+.| ..+||||-+++|.+...+.
T Consensus 376 ~~~~A~~~~e~~~~~~~~~GllsEq~d~~tG~~~g---n~PlawSha~lI~aa~~l~ 429 (472)
T 1gai_A 376 VKTFADGFVSIVETHAASNGSLSEQFDKSDGDELS---ARDLTWSYAALLTANNRRN 429 (472)
T ss_dssp HHHHHHHHHHHHHHHSCTTCCCCSEECTTTCCEES---SSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCCCCcccccCCCCCCCCC---ccchHHHHHHHHHHHHHHh
Confidence 7777766655544 47789999999988766 4599999999999988875
No 17
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=98.17 E-value=7.2e-05 Score=79.84 Aligned_cols=239 Identities=13% Similarity=0.083 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---HHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHHHH
Q 015270 51 GLWWIILLRAYGKCSGDLLVQER---IDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSA 127 (410)
Q Consensus 51 tLWfi~a~~~Y~~~TgD~~f~~~---~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwYnA 127 (410)
+-..+++++ +..+|+.++++. +.++++++++.+.-...++ +-|=.+ .|.-....+.-+.|
T Consensus 133 ~~~~~~~~~--~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~~d~-----------dlWEer----~g~~~~T~~~~~~a 195 (599)
T 2vn4_A 133 IALIGYSKW--LINNNYQSTVSNVIWPIVRNDLNYVAQYWNQTGF-----------DLWEEV----NGSSFFTVANQHRA 195 (599)
T ss_dssp HHHHHHHHH--HHHTTCHHHHHHHTHHHHHHHHHHHHHHTTSCEE-----------CTTSCC----EEEEHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHhCCcccccHHHHHHHHHHHHHHHHhCCCCCC-----------Ceeeec----CCcchHHHHHHHHH
Confidence 445555554 567899887754 5677777777553222111 122111 24456678889999
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccCC
Q 015270 128 LLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNK 207 (410)
Q Consensus 128 L~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~ 207 (410)
|..+++|++.++.+. .+..+.+..++..+ ++||.++.. | +.-+.+.
T Consensus 196 L~~aa~lA~~~g~~~---~~w~~~ad~i~~~i-~~~w~~~g~-------------------f----------~~~~~~~- 241 (599)
T 2vn4_A 196 LVEGATLAATLGQSG---SAYSSVAPQVLCFL-QRFWVSSGG-------------------Y----------VDSNINT- 241 (599)
T ss_dssp HHHHHHHHHHHTCCC---HHHHHHHHHHHHHH-GGGEETTTT-------------------E----------ECSEESS-
T ss_pred HHHHHHHHHHcCCCH---HHHHHHHHHHHHHH-HhhcCCCCC-------------------E----------EEEecCc-
Confidence 999999998865553 34455666678888 789964211 0 0000000
Q ss_pred CCccccccCCCccccchhccchhHHHhcCC------------CCHHHHHHHHHHHHHhhhhhhcCCCCcccCCCcCCCC-
Q 015270 208 GGYLIGNLQPAHMDFRFFSLGNIWSIVNGL------------ATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQE- 274 (410)
Q Consensus 208 ~~y~~~~~rP~~~d~r~~a~gN~LAl~~~l------------l~~~~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~d~~- 274 (410)
.-....+|.. -+|+..++. .+.++..+-++.|++ +|..-|++.. + ...+
T Consensus 242 ------~~~~~~lDas-----~LL~~~~~f~~~~~~~~~~~~p~dpr~l~Tl~ai~~---~L~~~y~i~~--g--~~~g~ 303 (599)
T 2vn4_A 242 ------NEGRTGKDVN-----SVLTSIHTFDPNLGCDAGTFQPCSDKALSNLKVVVD---SFRSIYGVNK--G--IPAGA 303 (599)
T ss_dssp ------CCCCCCCBTH-----HHHHHHHSCCGGGTTCTTTTCTTSHHHHHHHHHHHH---HHHTTCGGGT--T--CCTTS
T ss_pred ------cCCCCCcCHH-----HHhhhhccCCccccccccCCCCCCHHHHHHHHHHHH---HHHhhcCcCC--C--CcCCc
Confidence 0001123321 112222221 255666777777776 6643332220 0 0001
Q ss_pred --ceeeeCCCCCCCCcccccCCCccchHHHHHHHHHH-----------------------------cCCh----------
Q 015270 275 --WQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIK-----------------------------MNRP---------- 313 (410)
Q Consensus 275 --y~~~y~g~~~~rp~aYHNGtVWP~LlG~y~~A~~r-----------------------------~g~~---------- 313 (410)
.-.||..+ .|..|+.|.--..-++.++.+ .|+.
T Consensus 304 ~~~v~RY~~D------~y~Gg~pw~lcT~w~ae~l~~a~~~~~~~g~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~ 377 (599)
T 2vn4_A 304 AVAIGRYAED------VYYNGNPWYLATFAAAEQLYDAIYVWKKTGSITVTATSLAFFQELVPGVTAGTYSSSSSTFTNI 377 (599)
T ss_dssp CCCCCSBTTC------CGGGCCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHSTTCCSEEEETTSHHHHHH
T ss_pred eeEEEeCCCC------CCCCCCcHHHHHHHHHHHHHHHHHhhhccCceeeccchhHHHhhhcccccccccccCchhHHHH
Confidence 22455443 344588776555555555432 2322
Q ss_pred HH-----HHHHHHHHHHHhc-CCCCCccccCCCCCCCCCCcchHhHHHHHHHHHHHHHhc
Q 015270 314 EI-----AARAVQVAEKRLS-RDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLA 367 (410)
Q Consensus 314 ~~-----A~~~L~~~~~~l~-~~~l~ElFdG~~g~~~G~~ac~~QAWSvAe~Lr~~~~l~ 367 (410)
.+ |+.+++.++.+-. .+-+||=||..+|.+.|. .+||||-+++|.+...++
T Consensus 378 ~~~~~~~A~~~~~~~~~~a~~~GllsEqvd~~~G~~~gn---~PlawSha~lI~a~~~~~ 434 (599)
T 2vn4_A 378 INAVSTYADGFLSEAAKYVPADGSLAEQFDRNSGTPLSA---LHLTWSYASFLTATARRA 434 (599)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTCCCCSEECTTTCCEESS---SSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCccCCc---chHHHHHHHHHHHHHHHh
Confidence 22 6666655555443 467899999999887654 599999999999988764
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=91.00 E-value=0.66 Score=50.95 Aligned_cols=93 Identities=14% Similarity=0.084 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---HHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccc-------cccCCCceeh
Q 015270 51 GLWWIILLRAYGKCSGDLLVQER---IDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRR-------MGIHGHPLEI 120 (410)
Q Consensus 51 tLWfi~a~~~Y~~~TgD~~f~~~---~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~-------~~~~G~pVEI 120 (410)
+.|...++++|+++|||.+|+++ |-+.++.+...++...+ .. .-++..++.--|-. ....--+...
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~---~~-g~y~i~p~~sPE~~~~~~g~~~~~~~n~tyt 525 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIEN---EA-GYLVTSPSTSPEQRFRIGEKGYAVSSATTMD 525 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEEC---TT-SCEECSSBCBTTBCEEETTEEECCBSCCHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEEC---CC-CcEEECCCCcccccccCCCcccccccChHHH
Confidence 57889999999999999999986 55666666665544321 11 11221111100100 0001124689
Q ss_pred hHHHHHHHHHHHHhhCCCCCCHHHHHH
Q 015270 121 QALFYSALLCAREMLAPEDGSADLIRA 147 (410)
Q Consensus 121 NALwYnAL~~~~~La~~~~~~~~~~~~ 147 (410)
|+++...|+.+.++++.++.+.++..+
T Consensus 526 n~~~~~~l~~a~~a~~~Lg~~~~~~~~ 552 (803)
T 2rdy_A 526 LSLIAECFDNCIQAAKRLSIDEDFVKA 552 (803)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 999999999999999887666655433
No 19
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=89.34 E-value=12 Score=36.32 Aligned_cols=98 Identities=6% Similarity=-0.138 Sum_probs=54.4
Q ss_pred CcHHHHHHHHHHHHHH-hCChhHHhhHHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHHHH
Q 015270 49 DSGLWWIILLRAYGKC-SGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSA 127 (410)
Q Consensus 49 DatLWfi~a~~~Y~~~-TgD~~f~~~~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwYnA 127 (410)
|.++ .+++..+-++. |||..+.+. ..++++++++.+.... +..-..+-.||.+. +. .+.++-||++-.|
T Consensus 54 ~nar-~i~~~a~a~~~~~~~~~~~~~--A~~~~~~l~~~~~~~~-Gg~~~~~d~dg~~~-~~-----~~~~~~~af~i~a 123 (388)
T 2gz6_A 54 LQNR-QVWTFSMLCNQLEKRENWLKI--ARNGAKFLAQHGRDDE-GNWYFALTRGGEPL-VQ-----PYNIFSDCFAAMA 123 (388)
T ss_dssp HHHH-HHHHHHHHHHHTCCCHHHHHH--HHHHHHHHHHHSBCTT-SCBCSEECTTSCBC-CC-----CCCHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHhcCCHHHHHH--HHHHHHHHHHhcCCCC-CCEEEEEcCCCCcc-cC-----CcchHHHHHHHHH
Confidence 4444 56666665667 899988765 6888888876543210 00000011245432 21 2556789998888
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 015270 128 LLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYW 164 (410)
Q Consensus 128 L~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW 164 (410)
|..+.+... +.+ + .+.|.++.+.+.++||
T Consensus 124 l~~~y~~tg----~~~-~---l~~A~~~~~~i~~~~~ 152 (388)
T 2gz6_A 124 FSQYALASG----EEW-A---KDVAMQAYNNVLRRKD 152 (388)
T ss_dssp HHHHHHHHC----CHH-H---HHHHHHHHHHHHTC--
T ss_pred HHHHHHHhC----CHH-H---HHHHHHHHHHHHHHhc
Confidence 876666543 232 2 3555566777777776
No 20
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=87.56 E-value=9.6 Score=42.41 Aligned_cols=86 Identities=15% Similarity=0.056 Sum_probs=46.7
Q ss_pred cHHHHHHHHHHHHHHhCChhHHhh--HHHHHHHHHHHHhhhhcCCCCC--CceeeeCCCccccccccc--CCCceehhHH
Q 015270 50 SGLWWIILLRAYGKCSGDLLVQER--IDVQTGIKMILKLCLADGFDMF--PTLLVTDGSCMIDRRMGI--HGHPLEIQAL 123 (410)
Q Consensus 50 atLWfi~a~~~Y~~~TgD~~f~~~--~~l~~al~~i~~~~~~~~f~~~--~~ll~~dG~~~~Dr~~~~--~G~pVEINAL 123 (410)
.+.|....+++|+++|||.+|++. |-+..+.+...++.+. ++.. ..-++...++ .+.... .--+...|++
T Consensus 507 ~~aWla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d~~l~--~~~~~~~G~~vi~ps~--SPE~~~~~~~~~tydn~l 582 (899)
T 2eab_A 507 AVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLH--KAGSSSGDRLTTGVAY--SPEQGPLGTDGNTYESSL 582 (899)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCE--ECCGGGCSSEECSEEE--ETTEEEEEEECCHHHHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhheE--ecCcCCCCeEEEcccc--CCCCCCCCCCCcHHHHHH
Confidence 357899999999999999999943 4555555555442111 1110 1112211110 101100 0013467888
Q ss_pred HHHHHHHHHHhhCCCC
Q 015270 124 FYSALLCAREMLAPED 139 (410)
Q Consensus 124 wYnAL~~~~~La~~~~ 139 (410)
....|..+.+.++.++
T Consensus 583 ~~~ll~~~i~aa~~Lg 598 (899)
T 2eab_A 583 VWQMLNDAIEAAKAKG 598 (899)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8888888777765543
No 21
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=78.97 E-value=3.7 Score=44.75 Aligned_cols=82 Identities=9% Similarity=-0.091 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---HHHHHHHHHHHHhhhhcCCCCCCceeeeCCCccccccccc--CCCceehhHHHH
Q 015270 51 GLWWIILLRAYGKCSGDLLVQER---IDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGI--HGHPLEIQALFY 125 (410)
Q Consensus 51 tLWfi~a~~~Y~~~TgD~~f~~~---~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~--~G~pVEINALwY 125 (410)
+.|...++++|+++|||.+|+++ |-+.++.+...++... +....-++-. .+|.++... .-.+..+|+++.
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~---~~~~g~y~i~--~VtgPdEy~e~v~nn~ytn~~a~ 503 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHF---SKRNNQYMIH--GVTGADEYENNVDNNWDTNMLAQ 503 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEE---ETTTTEEECC--SBCCSSTTSCSBSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEE---eCCCCEEEEc--cccCcccccCCCCCcHHHHHHHH
Confidence 58899999999999999999975 4445554544433211 1111111100 011111100 013367999999
Q ss_pred HHHHHHHHhhCC
Q 015270 126 SALLCAREMLAP 137 (410)
Q Consensus 126 nAL~~~~~La~~ 137 (410)
..|+.+.++++.
T Consensus 504 ~~l~~a~~~~~~ 515 (754)
T 1h54_A 504 WTLKYTLEILGK 515 (754)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 999999999854
No 22
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=74.33 E-value=69 Score=31.43 Aligned_cols=94 Identities=10% Similarity=0.061 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHHHHHHHHHH
Q 015270 54 WIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCARE 133 (410)
Q Consensus 54 fi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwYnAL~~~~~ 133 (410)
+|++...-++.+|+..+++. ..++++.|.+.+....++..--. +.+|.+. +. -+.++.+|..-.|+..+.
T Consensus 57 ~i~~~a~a~~~~g~~~~l~~--A~~~~~fl~~~~~d~~~Gg~~~~-~~dG~~~-~~-----~~~lyd~Af~i~al~~~~- 126 (402)
T 3gt5_A 57 FVFNYAMAYLQFGTAEYLDA--VHHGLSYVRDVHRNPATGGYAWT-LCDDRVE-DD-----TNHCYGLAFVMLAYSCGL- 126 (402)
T ss_dssp HHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHTTBCTTTSCBCSE-EETTEEE-EC-----CEEHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhCChHHHHH--HHHHHHHHHHhCccCCCCcEEEE-eeCCCCC-cC-----CcchHHHHHHHHHHHHHH-
Confidence 66777666778899988765 67888888664322111111111 2556552 21 256788888777776633
Q ss_pred hhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhh
Q 015270 134 MLAPEDGSADLIRALNNRLVALSFHIREYYWI 165 (410)
Q Consensus 134 La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~ 165 (410)
.. + +.+ + .+.|..+.+.+.++||.
T Consensus 127 ~t---g-d~~-~---l~~A~~l~~~i~~~f~d 150 (402)
T 3gt5_A 127 KV---G-IKQ-A---REWMDETWCLLERHFWD 150 (402)
T ss_dssp HT---T-CTT-H---HHHHHHHHHHHHHHTEE
T ss_pred Hh---C-Chh-H---HHHHHHHHHHHHHHhcC
Confidence 22 2 222 2 34555667778888985
No 23
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=48.87 E-value=1.8e+02 Score=27.65 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=50.8
Q ss_pred CCcHHHHHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHHHH
Q 015270 48 VDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSA 127 (410)
Q Consensus 48 VDatLWfi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwYnA 127 (410)
.+.--++|.++.++++.|||...++. ..++++.|++... + +.+++.......+ .. .| .+.|+...+|
T Consensus 114 ~~~~af~i~al~~~y~~tg~~~~l~~--A~~~~~~i~~~~~----d--~~g~~~~~~~~~~-~~--~~--~~~~~~~~~a 180 (388)
T 2gz6_A 114 IFSDCFAAMAFSQYALASGEEWAKDV--AMQAYNNVLRRKD----N--PKGKYTKTYPGTR-PM--KA--LAVPMILANL 180 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHTC--------------------CC-CC--EE--THHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHhc----C--CCcccCcccCCCC-CC--CC--CCHHHHHHHH
Confidence 34556689999999999999998865 5666666654321 1 1122221110001 01 12 4566655444
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhh
Q 015270 128 LLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWI 165 (410)
Q Consensus 128 L~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~ 165 (410)
+.. |.+. .++ . ++.++|+.+.+.+.++|+.
T Consensus 181 ll~---l~~~-t~d-~---~~~~~A~~~~~~~~~~~~~ 210 (388)
T 2gz6_A 181 TLE---MEWL-LPQ-E---TLENVLAATVQEVMGDFLD 210 (388)
T ss_dssp HHH---TGGG-SCH-H---HHHHHHHHHHHHHHHTTEE
T ss_pred HHH---HHHH-cCC-H---HHHHHHHHHHHHHHHHHhc
Confidence 443 4433 222 2 2356666777888888874
No 24
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=44.01 E-value=2.4e+02 Score=27.61 Aligned_cols=253 Identities=11% Similarity=0.083 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhcCCCCCCceeeeCCCcccccccccCCCceehhHHHHHHHHHHHH
Q 015270 54 WIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCARE 133 (410)
Q Consensus 54 fi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~Dr~~~~~G~pVEINALwYnAL~~~~~ 133 (410)
.|++...-+. +|+...++. ..++++.|.+.+.....+..---+-.+|.... . +.++.||....|+.. .+
T Consensus 56 ~i~~~a~a~~-~g~~~~l~~--A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~-~------k~lyd~Af~i~al~~-~~ 124 (421)
T 2zbl_A 56 MLHVYSVAAS-MGRPGAYDL--VDHGIKAMNGALRDKKYGGWYACVNDQGVVDA-S------KQGYQHFFALLGAAS-AV 124 (421)
T ss_dssp HHHHHHHHHH-TTCTTHHHH--HHHHHHHHTTTTBCTTTSSBCSEEETTEEEEC-C------EEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHH-cCChhHHHH--HHHHHHHHHHhccCcCCCeEEEEeCCCCCcCC-c------hhHHHHHHHHHHHHH-HH
Q ss_pred hhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhhhhhhcCCCCCCCCccccccccCCCCcccc
Q 015270 134 MLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIG 213 (410)
Q Consensus 134 La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW~~~~~~~~~~~~~~e~~~~~~~n~~~~~~~~~~~~l~d~v~~~~~y~~~ 213 (410)
.... ....+.++.+.+.+.++||.+. ++- .++..+....-..+
T Consensus 125 ~tg~--------~~~l~~a~~~~~~l~~~~~d~~-------------------~Gg----------f~~~~d~d~~~~~~ 167 (421)
T 2zbl_A 125 TTGH--------PEARKLLDYTIEVIEKYFWSEE-------------------EQM----------CLESWDEAFSQTED 167 (421)
T ss_dssp TTTC--------TTHHHHHHHHHHHHHHHTEETT-------------------TTE----------ECCEECTTSCSBCS
T ss_pred HhCC--------ccHHHHHHHHHHHHHHHhccCC-------------------CCC----------eeeeecCCCCcccc
Q ss_pred ccCCCccccchhccchhHHHhcCCCCH----HHHHHHHHHHHHhhhhhhcCCCCcccCCCcCCCCceeeeC-----CCCC
Q 015270 214 NLQPAHMDFRFFSLGNIWSIVNGLATR----DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITG-----SDPK 284 (410)
Q Consensus 214 ~~rP~~~d~r~~a~gN~LAl~~~ll~~----~~a~~Vl~~v~~~~~~Lltp~GLRsL~P~~~d~~y~~~y~-----g~~~ 284 (410)
...+|- .......+.-++.+..+ ++++++++.+.. .+..+-+-|..-- .+++|.+..+ +..+
T Consensus 168 ~~~~n~----~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~---~~~~~~~~~l~~~--f~~~~~~~~~~~~dd~~~r 238 (421)
T 2zbl_A 168 YRGGNA----NMHAVEAFLIVYDVTHDKKWLDRALRIASVIIH---DVARNGDYRVNEH--FDSQWNPIRDYNKDNPAHR 238 (421)
T ss_dssp CEEHHH----HHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCC---CCCGGGTTCCCCE--ECTTSCBCTTTTTTSTTCS
T ss_pred cCCCcH----HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH---HhccCCCCchhhh--cCCccccchhccCCCcccc
Q ss_pred CCCcccccCCC--ccchHHHHHHHHHHcCC--h-HHHHHHHHHHHHHhcCCCCCc------cccCCCCCCCCCCcchHhH
Q 015270 285 NTPWSYHNAGS--WPTLLWQFTVACIKMNR--P-EIAARAVQVAEKRLSRDKWPE------YYDTKRARFIGKQAQLFQT 353 (410)
Q Consensus 285 ~rp~aYHNGtV--WP~LlG~y~~A~~r~g~--~-~~A~~~L~~~~~~l~~~~l~E------lFdG~~g~~~G~~ac~~QA 353 (410)
.||+-.-=|-. |-|++--...+.-+.|+ . .-.+.+..++...+..+-=+| ++....+.+.-.. ...
T Consensus 239 ~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~---k~~ 315 (421)
T 2zbl_A 239 FRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRE---RVR 315 (421)
T ss_dssp SSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCC---EEH
T ss_pred cccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCC---ccc
Q ss_pred HHHHHHHHHHHHh
Q 015270 354 WSIAGYLVSKILL 366 (410)
Q Consensus 354 WSvAe~Lr~~~~l 366 (410)
|.-++.+.+...|
T Consensus 316 w~~aea~~all~l 328 (421)
T 2zbl_A 316 WPIVEAMGTAYAL 328 (421)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
No 25
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=41.46 E-value=2.2e+02 Score=27.50 Aligned_cols=102 Identities=13% Similarity=-0.060 Sum_probs=58.4
Q ss_pred CCCCcHHHHHHHHHHHHHHhCChhHHhhHHHHHHHHHHHHhhhhcCCCCCCceeeeCCCccc-ccccccCCCceehhHHH
Q 015270 46 APVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMI-DRRMGIHGHPLEIQALF 124 (410)
Q Consensus 46 ~sVDatLWfi~a~~~Y~~~TgD~~f~~~~~l~~al~~i~~~~~~~~f~~~~~ll~~dG~~~~-Dr~~~~~G~pVEINALw 124 (410)
++++.++ +++++.++++.|||..+++. ..++++|+.+.... +++.+.||...- +.......+=-+-|+..
T Consensus 148 naisN~~-~~~~la~l~~~tgd~~Yl~~--A~~~~~w~~~~l~d------~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~ 218 (349)
T 3k7x_A 148 NTPVNAP-FIILSCWLYNELNETKYLEW--AMKTYEWQTKVLVR------EDGFVEDGINRLEDGTIDYEWKFTYNQGVY 218 (349)
T ss_dssp EHHHHHH-HHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHBC------TTSCBCCEECTTSSSCBCTTCCCHHHHHHH
T ss_pred chhhHHH-HHHHHHHHHHHhCCHHHHHH--HHHHHHHHHhcCCC------CCCeEecCCccCCCCccCCcCeeeHHHHHH
Confidence 5565555 66777788899999999876 67888999763221 124455543210 00000001223466666
Q ss_pred HHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 015270 125 YSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYW 164 (410)
Q Consensus 125 YnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW 164 (410)
..++..+-+.. ++.. ..+++.+|.+.+.++|+
T Consensus 219 l~g~~~LY~~T----~d~~----yl~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 219 IGANLELYRIT----KEAI----YLDTANKTAAISLKELT 250 (349)
T ss_dssp HHHHHHHHHHH----CCHH----HHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHhh----CcHH----HHHHHHHHHHHHHHHhc
Confidence 66665555443 2332 24667777777777786
No 26
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=23.35 E-value=4.9e+02 Score=24.83 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=57.4
Q ss_pred CCcHHHH----HHHHHHHHHHh---CChhHHhhHHHHHHHHHHHHhhhhcCCCCCCc-eee----eCCCcccccccccCC
Q 015270 48 VDSGLWW----IILLRAYGKCS---GDLLVQERIDVQTGIKMILKLCLADGFDMFPT-LLV----TDGSCMIDRRMGIHG 115 (410)
Q Consensus 48 VDatLWf----i~a~~~Y~~~T---gD~~f~~~~~l~~al~~i~~~~~~~~f~~~~~-ll~----~dG~~~~Dr~~~~~G 115 (410)
.+-.+|+ +++...-++.+ |+..+++. +.++++.|.+.+. +.... ++. .+|... + ..
T Consensus 51 ~~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~--A~~~~~fl~~~~~----d~~gg~g~~~s~d~dg~~~-~-----~~ 118 (402)
T 1fp3_A 51 DLKYVWLQGRQVWMYCRLYRKLERFHRPELLDA--AKAGGEFLLRHAR----VAPPEKKCAFVLTRDGRPV-K-----VQ 118 (402)
T ss_dssp CCEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHH--HHHHHHHHHHHTB----SSTTSCCBCSEECTTSCEE-E-----CC
T ss_pred CccchhhhHHHHHHHHHHHHHhcccCCHHHHHH--HHHHHHHHHHhcc----CcCCCCceEEEECCCCCcc-c-----cc
Confidence 3466787 77777656665 88887764 7888888876542 11111 121 123221 1 13
Q ss_pred CceehhHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 015270 116 HPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYW 164 (410)
Q Consensus 116 ~pVEINALwYnAL~~~~~La~~~~~~~~~~~~l~~~a~~L~~~f~~~FW 164 (410)
+-++.||++-.|+.-+.+... +... .+.|..+-+.+.++||
T Consensus 119 ~~lyd~af~~~a~~~~~~atg----d~~~----~~~A~~l~~~~~~~~~ 159 (402)
T 1fp3_A 119 RSIFSECFYTMAMNELWRVTA----EARY----QSEAVDMMDQIVHWVR 159 (402)
T ss_dssp SSSHHHHHHHHHHHHHHHHHC----CHHH----HHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhC----CHHH----HHHHHHHHHHHHHHhc
Confidence 567789999999877766642 2222 3445555666777776
Done!