Query 015271
Match_columns 410
No_of_seqs 128 out of 531
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 04:43:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015271.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015271hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05705 DUF829: Eukaryotic pr 100.0 1.3E-44 2.9E-49 344.6 20.4 228 25-267 1-240 (240)
2 KOG2521 Uncharacterized conser 100.0 6.7E-40 1.4E-44 327.6 17.2 293 23-331 38-350 (350)
3 PRK13604 luxD acyl transferase 99.1 2.5E-09 5.5E-14 106.6 14.8 239 23-308 36-292 (307)
4 PF00326 Peptidase_S9: Prolyl 99.0 2.1E-08 4.5E-13 93.3 16.9 193 41-272 4-211 (213)
5 PRK05077 frsA fermentation/res 98.9 5.5E-08 1.2E-12 100.8 18.9 222 14-271 184-413 (414)
6 PHA02857 monoglyceride lipase; 98.9 2.1E-07 4.6E-12 89.2 21.4 224 22-271 23-274 (276)
7 PF12695 Abhydrolase_5: Alpha/ 98.9 8.2E-08 1.8E-12 82.5 16.0 145 25-249 1-145 (145)
8 PLN02652 hydrolase; alpha/beta 98.9 1.8E-07 3.9E-12 96.5 21.0 69 202-272 321-389 (395)
9 TIGR01250 pro_imino_pep_2 prol 98.8 6.8E-07 1.5E-11 83.6 21.3 235 6-268 6-288 (288)
10 PRK10566 esterase; Provisional 98.8 9.2E-07 2E-11 83.5 21.9 61 205-270 186-248 (249)
11 PLN02298 hydrolase, alpha/beta 98.8 7.8E-07 1.7E-11 88.1 20.1 66 203-270 249-317 (330)
12 TIGR02427 protocat_pcaD 3-oxoa 98.8 6.6E-07 1.4E-11 81.6 17.7 61 203-268 191-251 (251)
13 PLN02385 hydrolase; alpha/beta 98.7 1.1E-06 2.5E-11 88.1 19.8 66 202-270 276-345 (349)
14 TIGR03343 biphenyl_bphD 2-hydr 98.7 1.8E-06 4E-11 82.4 20.0 61 203-268 221-281 (282)
15 PRK14875 acetoin dehydrogenase 98.7 1.5E-06 3.2E-11 86.7 19.3 223 9-269 116-370 (371)
16 PRK10749 lysophospholipase L2; 98.6 1E-05 2.2E-10 80.8 23.6 68 202-269 256-328 (330)
17 PRK11460 putative hydrolase; P 98.6 7.5E-06 1.6E-10 78.2 21.4 63 205-272 148-210 (232)
18 PF12697 Abhydrolase_6: Alpha/ 98.6 5.6E-06 1.2E-10 73.9 19.3 204 26-262 1-228 (228)
19 PLN02824 hydrolase, alpha/beta 98.6 4.2E-06 9.1E-11 81.3 19.2 62 203-269 232-293 (294)
20 PRK11126 2-succinyl-6-hydroxy- 98.6 6.3E-06 1.4E-10 77.0 19.3 56 203-269 186-241 (242)
21 TIGR03611 RutD pyrimidine util 98.6 2.4E-06 5.1E-11 79.0 16.0 61 203-268 196-256 (257)
22 TIGR01738 bioH putative pimelo 98.6 3.3E-06 7.2E-11 76.9 16.8 61 202-267 185-245 (245)
23 TIGR02240 PHA_depoly_arom poly 98.6 6.5E-06 1.4E-10 79.3 19.4 63 203-271 205-267 (276)
24 PLN03087 BODYGUARD 1 domain co 98.6 1.3E-05 2.9E-10 84.8 22.9 64 203-270 416-479 (481)
25 COG1647 Esterase/lipase [Gener 98.5 1.9E-06 4.1E-11 82.0 13.6 219 21-269 13-243 (243)
26 PLN02511 hydrolase 98.5 1E-05 2.2E-10 83.1 19.9 77 202-283 295-378 (388)
27 COG1506 DAP2 Dipeptidyl aminop 98.5 3.5E-06 7.5E-11 91.8 17.1 209 25-272 395-618 (620)
28 TIGR03100 hydr1_PEP hydrolase, 98.5 9.6E-06 2.1E-10 79.0 18.5 223 22-268 25-273 (274)
29 TIGR03695 menH_SHCHC 2-succiny 98.5 1.3E-05 2.8E-10 72.7 17.2 60 203-268 192-251 (251)
30 PRK03592 haloalkane dehalogena 98.5 3E-05 6.6E-10 75.3 20.9 65 203-271 226-290 (295)
31 PF02230 Abhydrolase_2: Phosph 98.4 1.5E-05 3.3E-10 74.7 17.7 61 205-270 155-215 (216)
32 TIGR03056 bchO_mg_che_rel puta 98.4 8.1E-05 1.7E-09 70.3 21.0 61 203-268 218-278 (278)
33 PRK10349 carboxylesterase BioH 98.3 2.8E-05 6E-10 73.8 16.8 63 202-269 193-255 (256)
34 PRK08775 homoserine O-acetyltr 98.3 4.2E-05 9E-10 76.7 18.8 66 202-271 274-340 (343)
35 PLN02965 Probable pheophorbida 98.3 8.3E-05 1.8E-09 70.9 19.9 63 203-270 191-253 (255)
36 PRK06489 hypothetical protein; 98.3 3.7E-05 8E-10 77.7 18.4 64 203-272 290-359 (360)
37 PRK03204 haloalkane dehalogena 98.3 6.8E-05 1.5E-09 73.3 19.6 58 205-267 227-285 (286)
38 PRK11071 esterase YqiA; Provis 98.3 8.6E-05 1.9E-09 68.9 18.8 55 204-268 135-189 (190)
39 PRK10985 putative hydrolase; P 98.3 7.3E-05 1.6E-09 74.5 19.4 64 202-269 252-319 (324)
40 PF01738 DLH: Dienelactone hyd 98.3 6E-05 1.3E-09 70.5 17.6 53 204-256 144-196 (218)
41 PRK00870 haloalkane dehalogena 98.2 9.2E-05 2E-09 72.3 18.7 66 202-270 236-301 (302)
42 COG2267 PldB Lysophospholipase 98.2 0.00017 3.8E-09 71.8 20.5 226 23-271 33-295 (298)
43 PRK10162 acetyl esterase; Prov 98.2 0.0002 4.3E-09 71.6 21.0 233 13-271 72-316 (318)
44 PRK10673 acyl-CoA esterase; Pr 98.2 0.00021 4.6E-09 67.0 20.2 62 203-269 193-254 (255)
45 COG0429 Predicted hydrolase of 98.2 0.00014 3.1E-09 73.0 19.0 234 14-269 64-339 (345)
46 PLN02679 hydrolase, alpha/beta 98.2 0.00026 5.6E-09 71.8 21.0 67 203-270 290-357 (360)
47 PLN02894 hydrolase, alpha/beta 98.2 0.00022 4.7E-09 73.7 20.1 69 202-275 322-390 (402)
48 TIGR01836 PHA_synth_III_C poly 98.1 0.0001 2.3E-09 74.1 17.2 64 203-269 284-349 (350)
49 PLN02578 hydrolase 98.1 0.00032 7E-09 70.8 20.7 61 202-268 293-353 (354)
50 PLN02980 2-oxoglutarate decarb 98.1 0.00012 2.6E-09 87.9 19.9 67 203-271 1566-1640(1655)
51 TIGR01607 PST-A Plasmodium sub 98.1 0.00014 3.1E-09 73.0 17.7 63 204-268 269-331 (332)
52 TIGR01249 pro_imino_pep_1 prol 98.1 0.00013 2.9E-09 71.7 17.1 57 205-269 248-304 (306)
53 PLN02442 S-formylglutathione h 98.1 0.0005 1.1E-08 67.6 20.5 63 203-275 215-278 (283)
54 TIGR01392 homoserO_Ac_trn homo 98.0 0.00026 5.6E-09 71.2 17.3 65 203-268 286-351 (351)
55 KOG4391 Predicted alpha/beta h 98.0 5.6E-05 1.2E-09 72.0 11.5 208 15-273 70-285 (300)
56 TIGR02821 fghA_ester_D S-formy 98.0 0.00068 1.5E-08 66.1 19.5 61 205-275 211-272 (275)
57 COG0400 Predicted esterase [Ge 98.0 0.00025 5.5E-09 67.3 15.6 61 204-270 145-205 (207)
58 PRK00175 metX homoserine O-ace 98.0 0.0013 2.9E-08 67.2 21.1 68 203-271 307-375 (379)
59 PLN02211 methyl indole-3-aceta 98.0 0.0017 3.8E-08 63.2 21.0 60 205-270 211-270 (273)
60 KOG1552 Predicted alpha/beta h 97.9 0.0001 2.2E-09 71.7 11.4 66 202-272 189-254 (258)
61 COG0412 Dienelactone hydrolase 97.9 0.00029 6.3E-09 67.9 14.4 167 15-251 17-204 (236)
62 PRK07581 hypothetical protein; 97.9 0.00077 1.7E-08 67.1 17.7 64 203-271 273-337 (339)
63 PF07859 Abhydrolase_3: alpha/ 97.8 0.00022 4.8E-09 65.7 11.9 191 31-252 8-211 (211)
64 KOG1838 Alpha/beta hydrolase [ 97.8 0.0014 3E-08 67.8 18.0 234 22-275 123-393 (409)
65 PF06500 DUF1100: Alpha/beta h 97.8 0.00058 1.3E-08 70.8 15.2 190 20-249 186-393 (411)
66 PRK05855 short chain dehydroge 97.8 0.0009 1.9E-08 70.6 16.6 62 204-271 232-293 (582)
67 KOG1454 Predicted hydrolase/ac 97.7 0.0017 3.6E-08 65.6 16.5 63 204-271 263-325 (326)
68 KOG2382 Predicted alpha/beta h 97.7 0.0018 3.9E-08 65.0 16.0 225 21-270 50-313 (315)
69 PRK10115 protease 2; Provision 97.6 0.0028 6E-08 70.2 18.7 210 22-270 443-675 (686)
70 PLN03084 alpha/beta hydrolase 97.6 0.0067 1.4E-07 62.6 20.3 61 203-269 323-383 (383)
71 TIGR01840 esterase_phb esteras 97.6 0.003 6.5E-08 59.0 16.0 28 207-234 170-197 (212)
72 PF03583 LIP: Secretory lipase 97.6 0.0063 1.4E-07 60.4 18.6 58 203-260 217-275 (290)
73 PRK05371 x-prolyl-dipeptidyl a 97.6 0.0042 9.1E-08 69.6 18.8 214 40-273 268-522 (767)
74 COG0657 Aes Esterase/lipase [L 97.5 0.013 2.9E-07 57.8 19.2 208 12-249 66-287 (312)
75 TIGR01838 PHA_synth_I poly(R)- 97.4 0.0024 5.2E-08 68.6 14.1 52 202-257 412-463 (532)
76 KOG1455 Lysophospholipase [Lip 97.4 0.018 3.9E-07 57.5 18.7 66 202-269 243-311 (313)
77 PF00561 Abhydrolase_1: alpha/ 97.3 0.0033 7.2E-08 57.1 11.7 58 202-264 172-229 (230)
78 COG0596 MhpC Predicted hydrola 97.1 0.079 1.7E-06 47.0 18.1 62 202-267 218-279 (282)
79 COG3545 Predicted esterase of 97.0 0.034 7.3E-07 51.6 15.2 170 24-269 3-178 (181)
80 TIGR03101 hydr2_PEP hydrolase, 96.9 0.25 5.5E-06 48.6 21.7 41 205-245 201-242 (266)
81 PF08840 BAAT_C: BAAT / Acyl-C 96.9 0.0016 3.5E-08 61.6 5.7 48 202-249 112-162 (213)
82 TIGR01839 PHA_synth_II poly(R) 96.8 0.015 3.3E-07 62.6 13.0 52 202-257 438-489 (560)
83 PF05448 AXE1: Acetyl xylan es 96.8 0.067 1.4E-06 54.0 16.7 61 202-269 259-319 (320)
84 PRK07868 acyl-CoA synthetase; 96.8 0.051 1.1E-06 62.6 17.5 65 202-270 294-361 (994)
85 PRK06765 homoserine O-acetyltr 96.6 0.0063 1.4E-07 62.9 8.2 66 203-269 321-387 (389)
86 PF10503 Esterase_phd: Esteras 96.5 0.099 2.2E-06 50.1 14.8 169 22-234 14-198 (220)
87 COG2945 Predicted hydrolase of 96.5 0.11 2.3E-06 49.1 14.3 169 21-268 25-205 (210)
88 KOG3043 Predicted hydrolase re 96.0 0.13 2.9E-06 49.5 12.8 47 203-250 162-210 (242)
89 PF08538 DUF1749: Protein of u 95.8 0.21 4.6E-06 50.1 13.9 110 23-144 32-150 (303)
90 PF09752 DUF2048: Uncharacteri 95.6 0.46 1E-05 48.6 15.3 60 204-268 288-347 (348)
91 PF06821 Ser_hydrolase: Serine 95.4 0.29 6.3E-06 44.9 12.1 153 26-249 1-153 (171)
92 KOG2100 Dipeptidyl aminopeptid 95.2 0.14 3E-06 57.5 11.3 69 206-274 682-751 (755)
93 PLN02872 triacylglycerol lipas 94.7 0.13 2.7E-06 53.5 8.4 64 205-271 325-390 (395)
94 cd00707 Pancreat_lipase_like P 94.5 0.31 6.8E-06 47.9 10.5 81 22-102 35-124 (275)
95 COG1073 Hydrolases of the alph 94.0 0.12 2.7E-06 48.6 6.3 64 206-271 233-298 (299)
96 KOG4178 Soluble epoxide hydrol 93.9 7.3 0.00016 39.6 18.7 64 202-270 255-320 (322)
97 PF03959 FSH1: Serine hydrolas 93.7 1.7 3.7E-05 40.8 13.3 42 203-248 159-200 (212)
98 TIGR01849 PHB_depoly_PhaZ poly 93.5 5.2 0.00011 41.9 17.6 68 202-269 334-405 (406)
99 KOG4409 Predicted hydrolase/ac 93.5 9.1 0.0002 39.4 18.6 63 204-270 302-364 (365)
100 PF05677 DUF818: Chlamydia CHL 93.3 1.9 4.1E-05 44.2 13.4 151 23-215 137-300 (365)
101 COG4099 Predicted peptidase [G 92.8 0.78 1.7E-05 46.2 9.8 40 205-244 315-354 (387)
102 KOG2984 Predicted hydrolase [G 92.4 0.14 3E-06 48.9 3.8 64 202-270 213-276 (277)
103 PF12715 Abhydrolase_7: Abhydr 92.1 0.51 1.1E-05 48.9 7.8 25 205-231 306-330 (390)
104 PF05728 UPF0227: Uncharacteri 91.7 11 0.00025 35.1 16.4 55 203-267 132-186 (187)
105 TIGR00976 /NonD putative hydro 90.6 1.7 3.8E-05 46.8 10.4 111 16-145 14-135 (550)
106 KOG4667 Predicted esterase [Li 90.4 13 0.00029 36.1 14.8 59 202-266 196-254 (269)
107 KOG2551 Phospholipase/carboxyh 90.3 0.87 1.9E-05 43.9 6.8 66 202-275 160-225 (230)
108 PF06342 DUF1057: Alpha/beta h 89.7 12 0.00027 37.5 14.5 185 21-232 32-239 (297)
109 PLN00021 chlorophyllase 89.5 2.8 6E-05 42.2 10.1 83 23-106 52-142 (313)
110 PF08386 Abhydrolase_4: TAP-li 88.5 1.6 3.4E-05 36.6 6.5 61 205-270 34-94 (103)
111 TIGR03230 lipo_lipase lipoprot 87.9 3.3 7.2E-05 43.8 9.9 81 22-102 40-131 (442)
112 KOG4627 Kynurenine formamidase 86.7 4 8.6E-05 39.3 8.5 190 14-253 59-251 (270)
113 COG3243 PhaC Poly(3-hydroxyalk 86.2 1 2.3E-05 47.1 4.8 69 202-274 327-403 (445)
114 KOG2112 Lysophospholipase [Lip 86.0 8 0.00017 36.9 10.3 60 205-269 144-203 (206)
115 PRK10439 enterobactin/ferric e 85.9 48 0.001 34.7 18.3 54 207-268 350-404 (411)
116 PF00151 Lipase: Lipase; Inte 84.8 2 4.2E-05 43.7 6.0 80 22-101 70-161 (331)
117 KOG2281 Dipeptidyl aminopeptid 83.9 12 0.00025 41.6 11.5 64 206-269 803-866 (867)
118 KOG1553 Predicted alpha/beta h 81.5 4 8.8E-05 42.0 6.6 65 64-146 285-349 (517)
119 COG4757 Predicted alpha/beta h 81.5 9.4 0.0002 37.5 8.8 219 23-268 29-278 (281)
120 PF00975 Thioesterase: Thioest 81.2 23 0.00049 32.6 11.3 103 24-143 1-106 (229)
121 COG3208 GrsT Predicted thioest 80.2 62 0.0014 31.7 20.0 63 201-268 172-234 (244)
122 PF02273 Acyl_transf_2: Acyl t 79.0 67 0.0015 31.9 13.8 236 23-307 29-284 (294)
123 PF05990 DUF900: Alpha/beta hy 75.9 30 0.00065 33.2 10.6 85 22-106 17-109 (233)
124 COG3509 LpqC Poly(3-hydroxybut 70.2 23 0.0005 35.8 8.4 92 11-102 45-156 (312)
125 KOG1515 Arylacetamide deacetyl 69.5 12 0.00027 38.2 6.6 48 207-256 270-317 (336)
126 PF05057 DUF676: Putative seri 69.4 40 0.00086 31.8 9.7 76 26-102 7-90 (217)
127 PF02129 Peptidase_S15: X-Pro 68.2 23 0.00049 34.2 7.9 110 19-146 15-140 (272)
128 PLN02872 triacylglycerol lipas 67.5 19 0.00041 37.5 7.6 77 23-102 74-172 (395)
129 PF12146 Hydrolase_4: Putative 65.2 15 0.00033 29.3 5.0 45 15-60 8-52 (79)
130 TIGR03712 acc_sec_asp2 accesso 64.9 1.4E+02 0.0031 32.2 13.4 188 23-244 288-482 (511)
131 PF05705 DUF829: Eukaryotic pr 63.5 2.8 6E-05 39.8 0.5 163 207-377 67-240 (240)
132 PF11144 DUF2920: Protein of u 61.2 16 0.00035 38.2 5.7 38 206-243 294-331 (403)
133 PF00756 Esterase: Putative es 58.6 23 0.00049 33.2 5.8 19 92-110 117-135 (251)
134 PF01674 Lipase_2: Lipase (cla 55.9 39 0.00085 32.4 6.9 32 23-54 1-32 (219)
135 PRK04940 hypothetical protein; 49.9 2.2E+02 0.0048 26.6 15.2 54 207-269 126-179 (180)
136 COG0552 FtsY Signal recognitio 49.6 1.3E+02 0.0028 31.0 9.7 93 23-144 137-233 (340)
137 PF10230 DUF2305: Uncharacteri 46.5 2.9E+02 0.0062 26.9 14.8 44 205-249 221-264 (266)
138 COG4782 Uncharacterized protei 45.2 1.9E+02 0.0041 30.1 10.2 113 23-144 116-236 (377)
139 cd00312 Esterase_lipase Estera 40.6 1.2E+02 0.0026 31.7 8.4 30 73-102 159-188 (493)
140 COG2021 MET2 Homoserine acetyl 40.5 72 0.0016 33.1 6.4 62 203-269 304-367 (368)
141 PF06057 VirJ: Bacterial virul 40.5 2E+02 0.0043 27.2 8.8 95 25-140 3-105 (192)
142 PF02089 Palm_thioest: Palmito 40.2 1.9E+02 0.0041 28.9 9.1 37 21-57 3-41 (279)
143 PF12740 Chlorophyllase2: Chlo 39.6 3.6E+02 0.0079 26.6 10.9 83 20-102 13-103 (259)
144 PF10340 DUF2424: Protein of u 36.0 5.3E+02 0.011 26.9 17.8 215 13-250 106-350 (374)
145 COG1505 Serine proteases of th 35.4 1.2E+02 0.0026 33.6 7.4 65 207-271 582-647 (648)
146 KOG3253 Predicted alpha/beta h 34.2 1.6E+02 0.0035 32.9 8.0 49 203-254 302-350 (784)
147 PF09497 Med12: Transcription 32.8 15 0.00032 28.6 0.0 20 356-375 36-55 (64)
148 PF04273 DUF442: Putative phos 30.9 2.2E+02 0.0048 24.2 6.9 34 77-110 74-107 (110)
149 KOG2624 Triglyceride lipase-ch 29.6 1.2E+02 0.0026 32.0 6.0 66 202-268 329-396 (403)
150 KOG1551 Uncharacterized conser 29.5 78 0.0017 31.8 4.4 57 209-270 310-366 (371)
151 PF11339 DUF3141: Protein of u 29.2 64 0.0014 35.2 4.0 60 202-261 294-363 (581)
152 PF08357 SEFIR: SEFIR domain; 28.8 58 0.0012 28.4 3.1 53 207-263 2-55 (150)
153 PF14577 SEO_C: Sieve element 28.1 1.7E+02 0.0036 28.7 6.3 71 207-281 34-119 (235)
154 COG4635 HemG Flavodoxin [Energ 27.1 2.3E+02 0.005 26.3 6.6 70 207-277 2-80 (175)
155 COG3458 Acetyl esterase (deace 26.4 97 0.0021 31.3 4.4 46 202-250 256-301 (321)
156 TIGR01391 dnaG DNA primase, ca 25.7 3.7E+02 0.0081 28.1 9.0 92 206-306 300-396 (415)
157 KOG2564 Predicted acetyltransf 24.9 4.7E+02 0.01 26.7 8.9 224 23-270 73-327 (343)
158 PF07819 PGAP1: PGAP1-like pro 24.8 5.4E+02 0.012 24.4 9.2 107 23-144 4-125 (225)
159 PF06309 Torsin: Torsin; Inte 24.5 1.3E+02 0.0028 26.6 4.5 16 88-103 50-67 (127)
160 PRK10945 gene expression modul 23.0 20 0.00043 28.6 -0.8 9 365-374 59-67 (72)
161 PF14412 AHH: A nuclease famil 22.9 3.1E+02 0.0068 22.6 6.5 74 216-305 19-105 (109)
162 TIGR00238 KamA family protein. 22.4 2.2E+02 0.0048 28.8 6.4 116 207-331 192-307 (331)
163 cd00465 URO-D_CIMS_like The UR 22.2 2.5E+02 0.0054 27.3 6.6 61 38-98 144-208 (306)
164 PRK10391 oriC-binding nucleoid 21.8 24 0.00052 28.0 -0.6 15 360-374 51-66 (71)
165 PF05716 AKAP_110: A-kinase an 21.8 2.9E+02 0.0062 30.5 7.1 33 204-238 617-649 (685)
166 cd00887 MoeA MoeA family. Memb 21.7 2.7E+02 0.0059 28.8 7.0 99 205-323 167-276 (394)
167 PRK06765 homoserine O-acetyltr 21.5 2.1E+02 0.0045 29.7 6.1 22 16-37 48-69 (389)
168 PF01676 Metalloenzyme: Metall 21.1 1.1E+02 0.0023 29.7 3.6 46 224-270 129-174 (252)
169 PF06500 DUF1100: Alpha/beta h 20.9 65 0.0014 34.0 2.2 111 202-325 186-301 (411)
170 PF05706 CDKN3: Cyclin-depende 20.8 3.6E+02 0.0078 25.0 6.8 55 40-99 89-143 (168)
171 TIGR01464 hemE uroporphyrinoge 20.5 4.9E+02 0.011 26.0 8.4 62 39-101 181-243 (338)
172 COG4188 Predicted dienelactone 20.2 3.8E+02 0.0082 27.9 7.5 36 23-58 70-105 (365)
173 PF06309 Torsin: Torsin; Inte 20.0 5.2E+02 0.011 22.8 7.4 47 21-67 49-97 (127)
No 1
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=100.00 E-value=1.3e-44 Score=344.64 Aligned_cols=228 Identities=22% Similarity=0.283 Sum_probs=161.7
Q ss_pred cEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHH-hccCCCCEEEEEecccHHH
Q 015271 25 GIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEE-LRIQTCPVVFVALSGGTKA 103 (410)
Q Consensus 25 pLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~-~~~~~~pIv~H~FSgGg~a 103 (410)
|||||+|||||+++||+||+++|++.|+++|++.++..++++|.++++++.+.+.+.+.+ ....+.+|+||+|||||..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~ 80 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSF 80 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHH
Confidence 799999999999999999999999999999999999999999977666655544444444 3332347999999987742
Q ss_pred HHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh--hHhhhhccCcccccCcc--h--hH-HHHHHHHhhh
Q 015271 104 CMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS--DFCARFGLHPTIQKIPG--L--SK-LVSWVAKGVT 176 (410)
Q Consensus 104 ~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~--~l~~~~~~~~~l~k~~~--~--p~-l~~wv~~~i~ 176 (410)
.+..++..++. .++++.++++++|+||||||+..+. ..++ ++.++++... . .. ++.++.
T Consensus 81 ~~~~l~~~~~~-------~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---- 146 (240)
T PF05705_consen 81 LYSQLLEAYQS-------RKKFGKLLPRIKGIIFDSCPGIPTYSSSARA---FSAALPKSSPRWFVPLWPLLQFLL---- 146 (240)
T ss_pred HHHHHHHHHHh-------cccccccccccceeEEeCCCCccccccHHHH---HHHHcCccchhhHHHHHHHHHHHH----
Confidence 22333333322 2445677788999999999998754 2332 2223443211 0 00 111111
Q ss_pred hhcccccccccccc----hHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchh
Q 015271 177 SGLDGLCLTRFEPQ----RAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHY 252 (410)
Q Consensus 177 ~~l~~lf~~~~~~~----~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~ 252 (410)
......+....... ...+++.+. ..+.++|+|||||++|++||+++||+|++++|++|.+|+.++|++|+||+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~ 225 (240)
T PF05705_consen 147 RLSIISYFIFGYPDVQEYYRRALNDFA-NSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHL 225 (240)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHhhhh-cCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhc
Confidence 00000010111111 222333332 3556799999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHH
Q 015271 253 EYYPIQYRAAITGLL 267 (410)
Q Consensus 253 r~hPeeY~~aV~~Fl 267 (410)
|+||++||++|.+||
T Consensus 226 r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 226 RKHPDRYWRAVDEFW 240 (240)
T ss_pred ccCHHHHHHHHHhhC
Confidence 999999999999997
No 2
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=6.7e-40 Score=327.62 Aligned_cols=293 Identities=25% Similarity=0.377 Sum_probs=220.2
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccc----hhhHHHHHHHHHHHHhccCCCCEEEEEec
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPER----ATSLAFVLINELVEELRIQTCPVVFVALS 98 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~----~~~~A~~vL~eL~~~~~~~~~pIv~H~FS 98 (410)
.+|||+++||+|+.+|+|+||+++|++.|+.++.++.+....+++.. .+.++...|.+|+++.+..++||+||.||
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 46999999999999999999999999999999999999888777754 45677788889998877778999999999
Q ss_pred ccHHHHHHHH-HHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh-hHhhhhccCcccccCcchhHHHHHHHHhhh
Q 015271 99 GGTKACMHKA-FQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS-DFCARFGLHPTIQKIPGLSKLVSWVAKGVT 176 (410)
Q Consensus 99 gGg~a~l~~~-~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~-~l~~~~~~~~~l~k~~~~p~l~~wv~~~i~ 176 (410)
|||..+|+.+ +|..+.. ....+...|+||||+|+.... ..+.+..+ .- .+. .....|......
T Consensus 118 ~ng~~~~~si~~~~~~~~----------~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~--~~--~~~-~~~~~~~~~~~~ 182 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHE----------PKAAQLSGGIIFDSAPARSSPVQLGWAVSF--SS--PPD-DYVARWARLNYH 182 (350)
T ss_pred CCceeehHHHHHHHhhcC----------chhHhhcCCceEeccccccchhhhcceecc--cc--Cch-hhHHHHHhcCeE
Confidence 9997677766 5544321 234557788999999998643 11111100 00 000 000011110000
Q ss_pred hhcccc---------ccccccc----chHHHHHHhh-cCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEE
Q 015271 177 SGLDGL---------CLTRFEP----QRAEYWRALY-NSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVK 242 (410)
Q Consensus 177 ~~l~~l---------f~~~~~~----~~~~~~~~l~-s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~ 242 (410)
..+..+ +....++ ....|.+... ......+++||+||++|.++|++++|++++..+++|..|+.++
T Consensus 183 i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~ 262 (350)
T KOG2521|consen 183 ITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVK 262 (350)
T ss_pred EEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEee
Confidence 000000 0000000 1111222111 1233478999999999999999999999999999999999999
Q ss_pred cCCCcccchhhcCHHHHHHHHHHHHHHHhhhhhhHhhhhccccCCCCchhhhhHHHhhhhhhhccccccccccccCCCCc
Q 015271 243 LNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEISGMEGTHDEISELICDLQNVAVNSNQSLRRVAVEPSDH 322 (410)
Q Consensus 243 Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (410)
|.||+||+|+|.||..|++++.+|++++.+.+...++.++..+.-+ .+|++++.||+|.+++.|.|+++||.|..+.||
T Consensus 263 ~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 341 (350)
T KOG2521|consen 263 FKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYNLKNRILGIRADSA-GDDPLTEKICSLFQVTLNLNRSSRRSPLVLDDH 341 (350)
T ss_pred ccCccceeeeccCcHHHHHHHHHHHHhcccccCCccCccceeecCC-CCchHHHHHHHHHHHHhccchhhhcccccccce
Confidence 9999999999999999999999999999999998876666665554 999999999999999999999999999999999
Q ss_pred ccccCCccc
Q 015271 323 FFLPSSTEL 331 (410)
Q Consensus 323 ~~~~~~~~~ 331 (410)
|++|+|.+|
T Consensus 342 ~~~~~s~~~ 350 (350)
T KOG2521|consen 342 LEVPSSIPY 350 (350)
T ss_pred eeccccCCC
Confidence 999999886
No 3
>PRK13604 luxD acyl transferase; Provisional
Probab=99.07 E-value=2.5e-09 Score=106.58 Aligned_cols=239 Identities=13% Similarity=0.106 Sum_probs=134.6
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccc-----cc-c--ccccchhhHHHHHHHHHHHHhccCCCCEEE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHF-----LD-A--FYPERATSLAFVLINELVEELRIQTCPVVF 94 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~-----~~-l--~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~ 94 (410)
++++||+++..+.+..+..+|++...++||+||.++..- .. + +.-.....-+..+++++.+. . ..+|++
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~--~~~I~L 112 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-G--INNLGL 112 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc-C--CCceEE
Confidence 456666666666666689999999999999999998421 11 1 00011222333456665443 2 235999
Q ss_pred EEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccC-cccccCcchhH-------
Q 015271 95 VALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLH-PTIQKIPGLSK------- 166 (410)
Q Consensus 95 H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~-~~l~k~~~~p~------- 166 (410)
+++|+||..++. ++. ..+++++|.||+..++...+...+... ..++-...+..
T Consensus 113 iG~SmGgava~~-~A~------------------~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~ 173 (307)
T PRK13604 113 IAASLSARIAYE-VIN------------------EIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHN 173 (307)
T ss_pred EEECHHHHHHHH-Hhc------------------CCCCCEEEEcCCcccHHHHHHHhhhcccccCccccccccccccccc
Confidence 999988843211 111 126999999999999765444322110 00110000000
Q ss_pred H-HHHHHHhhhhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCC
Q 015271 167 L-VSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG 245 (410)
Q Consensus 167 l-~~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~ 245 (410)
+ ..+++.. .+...+... ...-+. ....+.|.|+|||++|++||.++++++++.++. .+.+++.+++
T Consensus 174 l~~~~f~~~-------~~~~~~~~~-~s~i~~---~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~G 240 (307)
T PRK13604 174 LGSEVFVTD-------CFKHGWDTL-DSTINK---MKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLIG 240 (307)
T ss_pred ccHHHHHHH-------HHhcCcccc-ccHHHH---HhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeCC
Confidence 0 0111100 000000000 000011 123458999999999999999999999998643 5788999999
Q ss_pred CcccchhhcCHHHHHHHHHHHHHHHhhhhhhHhhhhccccCCCCchhhhhHH-Hhhhhhhhccc
Q 015271 246 SPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEISGMEGTHDEISEL-ICDLQNVAVNS 308 (410)
Q Consensus 246 S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 308 (410)
+.|.=. .++ -.+++|.+...+-- +.|.....+ ..+||.|| +-+|--+++|-
T Consensus 241 a~H~l~--~~~----~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 292 (307)
T PRK13604 241 SSHDLG--ENL----VVLRNFYQSVTKAA---IALDNGSLD---LDVDIIEPSFEDLTSATVKE 292 (307)
T ss_pred CccccC--cch----HHHHHHHHHHHHHH---heecCCccc---ccccccCCCHHHHHHHHHHH
Confidence 999732 222 45666766654432 455555443 35666665 45665555553
No 4
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.99 E-value=2.1e-08 Score=93.29 Aligned_cols=193 Identities=17% Similarity=0.101 Sum_probs=117.9
Q ss_pred HHHHHHHHhcCCeEEEEcccccc--------cccccc---hhhHHHHHHHHHHHHhccCCCCEEEEEecccHHHHHHHHH
Q 015271 41 RSFVDLYSSLGWNSLVSNSHFLD--------AFYPER---ATSLAFVLINELVEELRIQTCPVVFVALSGGTKACMHKAF 109 (410)
Q Consensus 41 ~KY~~lY~~lG~n~Llv~s~~~~--------l~~p~~---~~~~A~~vL~eL~~~~~~~~~pIv~H~FSgGg~a~l~~~~ 109 (410)
....+++.++||.|++++.+-.. ....+. ...-+..+++.+.+.....+..|.+.++|.||+.++..+.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 35677888999999999866322 111111 2223445556665553222334999999988853333222
Q ss_pred HHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHHHHHHHhhhhhccccccccccc
Q 015271 110 QIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVSWVAKGVTSGLDGLCLTRFEP 189 (410)
Q Consensus 110 qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~~wv~~~i~~~l~~lf~~~~~~ 189 (410)
+ . .+..++.|..+++.++....... .. .. ..+... +... ..
T Consensus 84 ~----------~-------~~~f~a~v~~~g~~d~~~~~~~~---------~~-~~--~~~~~~---------~~~~-~~ 124 (213)
T PF00326_consen 84 Q----------H-------PDRFKAAVAGAGVSDLFSYYGTT---------DI-YT--KAEYLE---------YGDP-WD 124 (213)
T ss_dssp H----------T-------CCGSSEEEEESE-SSTTCSBHHT---------CC-HH--HGHHHH---------HSST-TT
T ss_pred c----------c-------ceeeeeeeccceecchhcccccc---------cc-cc--cccccc---------cCcc-ch
Confidence 1 1 13678889888887764422210 00 00 001110 0000 01
Q ss_pred chHHHHH--HhhcCCC--CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHH
Q 015271 190 QRAEYWR--ALYNSVD--LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITG 265 (410)
Q Consensus 190 ~~~~~~~--~l~s~~~--~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~ 265 (410)
....|.. ....... ...|.|++||++|+.||.+...++++++++.|.++++..|++..|.--...+..++.+.+.+
T Consensus 125 ~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 125 NPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILD 204 (213)
T ss_dssp SHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHH
Confidence 1222211 1111122 56899999999999999999999999999999999999999999966666778899999999
Q ss_pred HHHHHhh
Q 015271 266 LLEKAAS 272 (410)
Q Consensus 266 Fl~ka~~ 272 (410)
|+++.++
T Consensus 205 f~~~~l~ 211 (213)
T PF00326_consen 205 FFDKYLK 211 (213)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998765
No 5
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.93 E-value=5.5e-08 Score=100.85 Aligned_cols=222 Identities=15% Similarity=0.095 Sum_probs=122.3
Q ss_pred cccCCCCCCCCcEEEEecccCCch-hHHHHHHHHHHhcCCeEEEEccccccc--ccc--cchhhHHHHHHHHHHHHhccC
Q 015271 14 LYWGRKAASFRGIVVLFSWVSVHE-HQLRSFVDLYSSLGWNSLVSNSHFLDA--FYP--ERATSLAFVLINELVEELRIQ 88 (410)
Q Consensus 14 ~~w~~~~~~~kpLVIL~GW~gA~~-rhL~KY~~lY~~lG~n~Llv~s~~~~l--~~p--~~~~~~A~~vL~eL~~~~~~~ 88 (410)
+++.++..++.|+||++|+.++.. .....+++...++||+||+++.+-... ..+ .........+++.+.......
T Consensus 184 ~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd 263 (414)
T PRK05077 184 FLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVD 263 (414)
T ss_pred EEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccC
Confidence 344555455789999999988753 345567788889999999998763221 111 111112334555554432112
Q ss_pred CCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHH
Q 015271 89 TCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLV 168 (410)
Q Consensus 89 ~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~ 168 (410)
..+|.+.++|+||+.++..+.. . .++|+++|..+++..........+ ..++ ....
T Consensus 264 ~~ri~l~G~S~GG~~Al~~A~~----------~-------p~ri~a~V~~~~~~~~~~~~~~~~---~~~p-----~~~~ 318 (414)
T PRK05077 264 HTRVAAFGFRFGANVAVRLAYL----------E-------PPRLKAVACLGPVVHTLLTDPKRQ---QQVP-----EMYL 318 (414)
T ss_pred cccEEEEEEChHHHHHHHHHHh----------C-------CcCceEEEEECCccchhhcchhhh---hhch-----HHHH
Confidence 2459999999888533321111 1 137999999998864211000000 0011 0000
Q ss_pred HHHHHhhhhhcccccccccccchHHHH---HHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCC
Q 015271 169 SWVAKGVTSGLDGLCLTRFEPQRAEYW---RALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG 245 (410)
Q Consensus 169 ~wv~~~i~~~l~~lf~~~~~~~~~~~~---~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~ 245 (410)
..+...+ +........+...-..+. ..+. ....++|.|+|++++|+++|.++.+.+++.. -+.+++.+++
T Consensus 319 ~~la~~l--g~~~~~~~~l~~~l~~~sl~~~~~l-~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~~~~l~~i~~ 391 (414)
T PRK05077 319 DVLASRL--GMHDASDEALRVELNRYSLKVQGLL-GRRCPTPMLSGYWKNDPFSPEEDSRLIASSS----ADGKLLEIPF 391 (414)
T ss_pred HHHHHHh--CCCCCChHHHHHHhhhccchhhhhh-ccCCCCcEEEEecCCCCCCCHHHHHHHHHhC----CCCeEEEccC
Confidence 0000000 000000000000000000 0001 1246789999999999999999999776543 2456888998
Q ss_pred CcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 246 SPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 246 S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
++|. ..|++..+.+.+|+++.+
T Consensus 392 ~~~~----e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 392 KPVY----RNFDKALQEISDWLEDRL 413 (414)
T ss_pred CCcc----CCHHHHHHHHHHHHHHHh
Confidence 7444 488999999999998753
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=98.92 E-value=2.1e-07 Score=89.24 Aligned_cols=224 Identities=17% Similarity=0.114 Sum_probs=121.0
Q ss_pred CCCcEEEE-ecccCCchhHHHHHHHHHHhcCCeEEEEccccccccccc-----chhhHHHHHHHHHHHHh-ccCCCCEEE
Q 015271 22 SFRGIVVL-FSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPE-----RATSLAFVLINELVEEL-RIQTCPVVF 94 (410)
Q Consensus 22 ~~kpLVIL-~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~-----~~~~~A~~vL~eL~~~~-~~~~~pIv~ 94 (410)
..+++|++ +||.+ ........++.+.+.||.++.++.+-...-.+. .-...+.++++.+.... .....|+++
T Consensus 23 ~~~~~v~llHG~~~-~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l 101 (276)
T PHA02857 23 YPKALVFISHGAGE-HSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFL 101 (276)
T ss_pred CCCEEEEEeCCCcc-ccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEE
Confidence 46788877 77754 455667888888889999999875522111110 10112233333222111 112246999
Q ss_pred EEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh-----hHh---hhhccCcccccCcchhH
Q 015271 95 VALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS-----DFC---ARFGLHPTIQKIPGLSK 166 (410)
Q Consensus 95 H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~-----~l~---~~~~~~~~l~k~~~~p~ 166 (410)
.+.|+||..++..+.. . .++++++|+-|++..... .+. ........+........
T Consensus 102 vG~S~GG~ia~~~a~~----------~-------p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (276)
T PHA02857 102 LGHSMGATISILAAYK----------N-------PNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPES 164 (276)
T ss_pred EEcCchHHHHHHHHHh----------C-------ccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhh
Confidence 9999888422221111 1 136899999998755311 000 00000000000000000
Q ss_pred H---HHHHHHhhhhhcccccccccccchHHHHH-------Hh-hcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcC
Q 015271 167 L---VSWVAKGVTSGLDGLCLTRFEPQRAEYWR-------AL-YNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALG 235 (410)
Q Consensus 167 l---~~wv~~~i~~~l~~lf~~~~~~~~~~~~~-------~l-~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G 235 (410)
+ ..... ....+..... ......+.. .. ......++|.|+++|++|.++|.+..+++++..+.
T Consensus 165 ~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-- 237 (276)
T PHA02857 165 VSRDMDEVY---KYQYDPLVNH--EKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC-- 237 (276)
T ss_pred ccCCHHHHH---HHhcCCCccC--CCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC--
Confidence 0 00000 0000000000 000111100 00 01235679999999999999999999999887532
Q ss_pred CCeEEEEcCCCcccchhhcC--HHHHHHHHHHHHHHHh
Q 015271 236 GDVKLVKLNGSPHIGHYEYY--PIQYRAAITGLLEKAA 271 (410)
Q Consensus 236 ~~V~l~~Fe~S~HV~H~r~h--PeeY~~aV~~Fl~ka~ 271 (410)
+++++.++++.|.-|.... .++.++.+.+|+++..
T Consensus 238 -~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 238 -NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred -CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 6889999999999998754 7888899999998863
No 7
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.90 E-value=8.2e-08 Score=82.47 Aligned_cols=145 Identities=17% Similarity=0.256 Sum_probs=98.1
Q ss_pred cEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHhccCCCCEEEEEecccHHHH
Q 015271 25 GIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEELRIQTCPVVFVALSGGTKAC 104 (410)
Q Consensus 25 pLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H~FSgGg~a~ 104 (410)
++|+++||.+.. ..+..+++.+.+.||.+++++.+...--. ....+.++++.+..... ...+|++-++|+||..+
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a 75 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYPGHGDSD---GADAVERVLADIRAGYP-DPDRIILIGHSMGGAIA 75 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCTTSTTSH---HSHHHHHHHHHHHHHHC-TCCEEEEEEETHHHHHH
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecCCCCccc---hhHHHHHHHHHHHhhcC-CCCcEEEEEEccCcHHH
Confidence 578888887764 45789999999999999999765433321 11233445555433323 33569999999888533
Q ss_pred HHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHHHHHHHhhhhhcccccc
Q 015271 105 MHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVSWVAKGVTSGLDGLCL 184 (410)
Q Consensus 105 l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~~wv~~~i~~~l~~lf~ 184 (410)
+..+.+ + ++++++|+-+++.+ ...+
T Consensus 76 ~~~~~~----------~--------~~v~~~v~~~~~~~-~~~~------------------------------------ 100 (145)
T PF12695_consen 76 ANLAAR----------N--------PRVKAVVLLSPYPD-SEDL------------------------------------ 100 (145)
T ss_dssp HHHHHH----------S--------TTESEEEEESESSG-CHHH------------------------------------
T ss_pred HHHhhh----------c--------cceeEEEEecCccc-hhhh------------------------------------
Confidence 332221 1 38889998888300 0000
Q ss_pred cccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCccc
Q 015271 185 TRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHI 249 (410)
Q Consensus 185 ~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV 249 (410)
...+.|.++++|++|+++|.+.+++++++++ .+.+++.++++.|.
T Consensus 101 -----------------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 -----------------AKIRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp -----------------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred -----------------hccCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 1134599999999999999999999988875 67899999999994
No 8
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.89 E-value=1.8e-07 Score=96.49 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=59.9
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 272 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~ 272 (410)
...++|.|+|+|++|.++|.+..+++++++. +.+++++.++++.|.-++..+|+++.+.|.+|++....
T Consensus 321 ~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~--~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 321 KSVTVPFMVLHGTADRVTDPLASQDLYNEAA--SRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred ccCCCCEEEEEeCCCCCCCHHHHHHHHHhcC--CCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 4567999999999999999999999988753 34578889999999998888999999999999997543
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.84 E-value=6.8e-07 Score=83.65 Aligned_cols=235 Identities=12% Similarity=0.100 Sum_probs=122.1
Q ss_pred ccccCCCccccCCCC-CC-CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccc-cc---c--chhhHHHHH
Q 015271 6 SINSDGSSLYWGRKA-AS-FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAF-YP---E--RATSLAFVL 77 (410)
Q Consensus 6 ~~~~~~~~~~w~~~~-~~-~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~-~p---~--~~~~~A~~v 77 (410)
.+...|++.+|.+.+ .+ .+|+|+++||.++.......+.++..+.||+++.++-+-...- .+ . .......+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 456668887776543 23 5789999999888766556666666667999999986532111 01 0 112212233
Q ss_pred HHHHHHHhccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHh--hhhccC
Q 015271 78 INELVEELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFC--ARFGLH 155 (410)
Q Consensus 78 L~eL~~~~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~--~~~~~~ 155 (410)
+..+.+..... ++++-++|+||..++..+.. . .++++++|+-++......... ....
T Consensus 86 ~~~~~~~~~~~--~~~liG~S~Gg~ia~~~a~~----------~-------p~~v~~lvl~~~~~~~~~~~~~~~~~~-- 144 (288)
T TIGR01250 86 LEEVREKLGLD--KFYLLGHSWGGMLAQEYALK----------Y-------GQHLKGLIISSMLDSAPEYVKELNRLR-- 144 (288)
T ss_pred HHHHHHHcCCC--cEEEEEeehHHHHHHHHHHh----------C-------ccccceeeEecccccchHHHHHHHHHH--
Confidence 44555555433 48999999888422221111 1 136888888776433211000 0000
Q ss_pred ccccc-------------CcchhHHHHHHHHhhhh-hccc--c----cccccccchHHHHH------------------H
Q 015271 156 PTIQK-------------IPGLSKLVSWVAKGVTS-GLDG--L----CLTRFEPQRAEYWR------------------A 197 (410)
Q Consensus 156 ~~l~k-------------~~~~p~l~~wv~~~i~~-~l~~--l----f~~~~~~~~~~~~~------------------~ 197 (410)
..++. ....+.....+. .... .+.. . ............+. .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (288)
T TIGR01250 145 KELPPEVRAAIKRCEASGDYDNPEYQEAVE-VFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDI 223 (288)
T ss_pred hhcChhHHHHHHHHHhccCcchHHHHHHHH-HHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCH
Confidence 00000 000000000000 0000 0000 0 00000000000000 0
Q ss_pred hhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 198 LYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 198 l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
.-.....++|.|+++++.|.+ +.+..+.+++.. -.++.+.++++.|.-++. +|+++.+.|.+|++
T Consensus 224 ~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 224 TDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI----AGSRLVVFPDGSHMTMIE-DPEVYFKLLSDFIR 288 (288)
T ss_pred HHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhc----cCCeEEEeCCCCCCcccC-CHHHHHHHHHHHhC
Confidence 000134679999999999985 557776665543 245788899999998885 89999999999974
No 10
>PRK10566 esterase; Provisional
Probab=98.83 E-value=9.2e-07 Score=83.53 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=52.0
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCC--CeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGG--DVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~--~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
++|.|++++++|.++|++..+++++.+++.|. +++.+.++++.|.- .|+ -...+.+||++.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~----~~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRI----TPE-ALDAGVAFFRQH 248 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCcc----CHH-HHHHHHHHHHhh
Confidence 57999999999999999999999999988886 48888999999963 344 468888898864
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.77 E-value=7.8e-07 Score=88.15 Aligned_cols=66 Identities=17% Similarity=0.203 Sum_probs=51.1
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhc---CHHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEY---YPIQYRAAITGLLEKA 270 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~---hPeeY~~aV~~Fl~ka 270 (410)
..++|.|+|+|++|.++|.+..+++++..+. .+.+++.|+++.|.-++.. ..+++.+.|.+|+.+.
T Consensus 249 ~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 249 DVSIPFIVLHGSADVVTDPDVSRALYEEAKS--EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred hcCCCEEEEecCCCCCCCHHHHHHHHHHhcc--CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 4579999999999999999999999887643 3468889999998765532 2355677777777764
No 12
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.76 E-value=6.6e-07 Score=81.59 Aligned_cols=61 Identities=23% Similarity=0.432 Sum_probs=52.0
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
..++|.|+|++++|.++|.+.++++.+... ..+.+.++++.|..++ .+|+++.+.|.+|++
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIRGAGHIPCV-EQPEAFNAALRDFLR 251 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEECCCCCcccc-cChHHHHHHHHHHhC
Confidence 457899999999999999998888766542 3578899999999987 679999999999973
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.72 E-value=1.1e-06 Score=88.09 Aligned_cols=66 Identities=18% Similarity=0.159 Sum_probs=51.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHH----HHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQ----YRAAITGLLEKA 270 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPee----Y~~aV~~Fl~ka 270 (410)
...++|.|+|+|++|.++|.+..+++++.+.. .+++++.++++.|.-+. .+|++ ..+.|.+|+++.
T Consensus 276 ~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~-e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 276 EEVSLPLLILHGEADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILE-GEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred ccCCCCEEEEEeCCCCccChHHHHHHHHHcCC--CCceEEEeCCCeeeccc-CCChhhHHHHHHHHHHHHHHh
Confidence 34679999999999999999999998877532 35788899999998544 56666 555677777654
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.71 E-value=1.8e-06 Score=82.45 Aligned_cols=61 Identities=11% Similarity=0.160 Sum_probs=52.7
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
...+|.|+|+++.|.++|.+..+++++.++ +++++.++++.|.- ...+|++..++|.+|++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~~i~~agH~~-~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLHVFSRCGHWA-QWEHADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEEEeCCCCcCC-cccCHHHHHHHHHHHhh
Confidence 467899999999999999998888777653 47788899999995 56899999999999985
No 15
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.69 E-value=1.5e-06 Score=86.68 Aligned_cols=223 Identities=15% Similarity=0.118 Sum_probs=117.4
Q ss_pred cCCCccccCCCC-CCCCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccc---cchhhHHHHHHHHHHHH
Q 015271 9 SDGSSLYWGRKA-ASFRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYP---ERATSLAFVLINELVEE 84 (410)
Q Consensus 9 ~~~~~~~w~~~~-~~~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p---~~~~~~A~~vL~eL~~~ 84 (410)
..|.++.|-+.+ ...+++|+++||.+.... ....... ...+|+++.++.+-.....+ .....-..+.+..+++.
T Consensus 116 ~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~-l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 193 (371)
T PRK14875 116 IGGRTVRYLRLGEGDGTPVVLIHGFGGDLNN-WLFNHAA-LAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA 193 (371)
T ss_pred EcCcEEEEecccCCCCCeEEEECCCCCccch-HHHHHHH-HhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 345555555443 335789999999887643 3333333 34469999998664332211 11222222333445555
Q ss_pred hccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh---hHhhhhccCcccccC
Q 015271 85 LRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS---DFCARFGLHPTIQKI 161 (410)
Q Consensus 85 ~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~---~l~~~~~~~~~l~k~ 161 (410)
... .++++.++|.||..++..+.+ . .+++.++|+.++++.... .+...+... ..+
T Consensus 194 ~~~--~~~~lvG~S~Gg~~a~~~a~~----------~-------~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~--~~~- 251 (371)
T PRK14875 194 LGI--ERAHLVGHSMGGAVALRLAAR----------A-------PQRVASLTLIAPAGLGPEINGDYIDGFVAA--ESR- 251 (371)
T ss_pred cCC--ccEEEEeechHHHHHHHHHHh----------C-------chheeEEEEECcCCcCcccchhHHHHhhcc--cch-
Confidence 433 358999999888533332211 1 137889999887654311 111111000 000
Q ss_pred cchhHHHHHHHHh--------------hh---------hhcccccccccc--cchHHHHHHhhcCCCCCCcEEEEeeCCC
Q 015271 162 PGLSKLVSWVAKG--------------VT---------SGLDGLCLTRFE--PQRAEYWRALYNSVDLGTPFLIICSDND 216 (410)
Q Consensus 162 ~~~p~l~~wv~~~--------------i~---------~~l~~lf~~~~~--~~~~~~~~~l~s~~~~~~P~LyIYS~~D 216 (410)
..+..|+... +. ..+..+....+. .+..++...+ ...++|.|+|+|++|
T Consensus 252 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~Pvlii~g~~D 325 (371)
T PRK14875 252 ---RELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRL---ASLAIPVLVIWGEQD 325 (371)
T ss_pred ---hHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHH---hcCCCCEEEEEECCC
Confidence 0000111000 00 000000000000 0111111111 345799999999999
Q ss_pred CccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 217 ELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 217 ~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
.++|++..+++. ..++.+.++++.|.-++ .+|++..+.|.+|+++
T Consensus 326 ~~vp~~~~~~l~-------~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 326 RIIPAAHAQGLP-------DGVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred CccCHHHHhhcc-------CCCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 999988765432 35788899999998665 5899999999999975
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=98.64 E-value=1e-05 Score=80.78 Aligned_cols=68 Identities=19% Similarity=0.261 Sum_probs=57.5
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcC---CCeEEEEcCCCcccchhhcC--HHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALG---GDVKLVKLNGSPHIGHYEYY--PIQYRAAITGLLEK 269 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G---~~V~l~~Fe~S~HV~H~r~h--PeeY~~aV~~Fl~k 269 (410)
...++|.|+|+|++|.++|.+..+++++..++.| .+++++.++++.|.-+...+ .++.++.|.+|+++
T Consensus 256 ~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 256 GDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred cCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 4567899999999999999999999998887655 34689999999999887665 67788888888875
No 17
>PRK11460 putative hydrolase; Provisional
Probab=98.63 E-value=7.5e-06 Score=78.17 Aligned_cols=63 Identities=19% Similarity=0.150 Sum_probs=53.8
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhh
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 272 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~ 272 (410)
+.|.|++|+++|++||++..+++++.+++.|.+++.+.+++..|.= . .+-.+.+.+|+++.+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i----~-~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI----D-PRLMQFALDRLRYTVP 210 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC----C-HHHHHHHHHHHHHHcc
Confidence 5699999999999999999999999999999999999999999974 2 4555777777776653
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.62 E-value=5.6e-06 Score=73.93 Aligned_cols=204 Identities=19% Similarity=0.205 Sum_probs=109.4
Q ss_pred EEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccc-----cchh-hHHHHHHHHHHHHhccCCCCEEEEEecc
Q 015271 26 IVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYP-----ERAT-SLAFVLINELVEELRIQTCPVVFVALSG 99 (410)
Q Consensus 26 LVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p-----~~~~-~~A~~vL~eL~~~~~~~~~pIv~H~FSg 99 (410)
||+++||.+.. ....+.++.. +.|+++++++.+-...-.+ .... ..+ +.+.++++.... .++++.+.|.
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-~~l~~~l~~~~~--~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYA-EDLAELLDALGI--KKVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHH-HHHHHHHHHTTT--SSEEEEEETH
T ss_pred eEEECCCCCCH-HHHHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhh-hhhhhccccccc--cccccccccc
Confidence 68888888777 5567777766 5799999998653221111 1111 223 334456666544 3599999998
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhH----hhhhccCcccccCcchhHHHHHHHHhh
Q 015271 100 GTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDF----CARFGLHPTIQKIPGLSKLVSWVAKGV 175 (410)
Q Consensus 100 Gg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l----~~~~~~~~~l~k~~~~p~l~~wv~~~i 175 (410)
||..++..+.+ ..++|+++|+-+++....... ...+.. ..+.... .....+....+
T Consensus 76 Gg~~a~~~a~~-----------------~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 135 (228)
T PF12697_consen 76 GGMIALRLAAR-----------------YPDRVKGLVLLSPPPPLPDSPSRSFGPSFIR-RLLAWRS--RSLRRLASRFF 135 (228)
T ss_dssp HHHHHHHHHHH-----------------SGGGEEEEEEESESSSHHHHHCHHHHHHHHH-HHHHHHH--HHHHHHHHHHH
T ss_pred ccccccccccc-----------------cccccccceeecccccccccccccccchhhh-hhhhccc--ccccccccccc
Confidence 87422221111 123899999999988653211 100000 0000000 00000000000
Q ss_pred hhhcc-----c-------cccccccc--chHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEE
Q 015271 176 TSGLD-----G-------LCLTRFEP--QRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLV 241 (410)
Q Consensus 176 ~~~l~-----~-------lf~~~~~~--~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~ 241 (410)
..... . .+...+.. ...+++..+ ...++|.|+++|++|.++|.+.++++.+.. .+++.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~ 208 (228)
T PF12697_consen 136 YRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEAL---PRIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELV 208 (228)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccc---cccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEE
Confidence 00000 0 00000000 111122122 234789999999999999977777776653 368999
Q ss_pred EcCCCcccchhhcCHHHHHHH
Q 015271 242 KLNGSPHIGHYEYYPIQYRAA 262 (410)
Q Consensus 242 ~Fe~S~HV~H~r~hPeeY~~a 262 (410)
.++++.|..++. +|++..++
T Consensus 209 ~~~~~gH~~~~~-~p~~~~~a 228 (228)
T PF12697_consen 209 VIPGAGHFLFLE-QPDEVAEA 228 (228)
T ss_dssp EETTSSSTHHHH-SHHHHHHH
T ss_pred EECCCCCccHHH-CHHHHhcC
Confidence 999999998875 89887653
No 19
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.60 E-value=4.2e-06 Score=81.25 Aligned_cols=62 Identities=18% Similarity=0.259 Sum_probs=51.6
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
...+|.|+|+|++|.++|.+..+.+.+. --..+++.++++.|.-|+ .+|++..+.|.+|+++
T Consensus 232 ~i~~P~lvi~G~~D~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 232 AVKCPVLIAWGEKDPWEPVELGRAYANF----DAVEDFIVLPGVGHCPQD-EAPELVNPLIESFVAR 293 (294)
T ss_pred hcCCCeEEEEecCCCCCChHHHHHHHhc----CCccceEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 4678999999999999999887764332 223578899999999887 8899999999999975
No 20
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.59 E-value=6.3e-06 Score=76.96 Aligned_cols=56 Identities=21% Similarity=0.380 Sum_probs=45.5
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
..++|.|+|+|++|.++. +.++. .+.+.+.+++++|.-++ .+|+++.+.|.+|+++
T Consensus 186 ~i~~P~lii~G~~D~~~~-----~~~~~-----~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 186 ALTFPFYYLCGERDSKFQ-----ALAQQ-----LALPLHVIPNAGHNAHR-ENPAAFAASLAQILRL 241 (242)
T ss_pred ccCCCeEEEEeCCcchHH-----HHHHH-----hcCeEEEeCCCCCchhh-hChHHHHHHHHHHHhh
Confidence 467899999999998652 23322 15788999999999886 7899999999999986
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.58 E-value=2.4e-06 Score=78.96 Aligned_cols=61 Identities=23% Similarity=0.340 Sum_probs=51.9
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
..++|.|++++++|.++|.+..+++++.. .+++.+.++++.|.-++ .+|+++.+.|.+|++
T Consensus 196 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 196 RIQHPVLLIANRDDMLVPYTQSLRLAAAL----PNAQLKLLPYGGHASNV-TDPETFNRALLDFLK 256 (257)
T ss_pred ccCccEEEEecCcCcccCHHHHHHHHHhc----CCceEEEECCCCCCccc-cCHHHHHHHHHHHhc
Confidence 45789999999999999999988877653 24577889999999654 799999999999986
No 22
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.58 E-value=3.3e-06 Score=76.86 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=52.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 267 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl 267 (410)
...++|.|+|+|++|.++|.+..+.+.+.. -+++.+.+++++|..++ .+|+++.+.|.+|+
T Consensus 185 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 185 QNISVPFLRLYGYLDGLVPAKVVPYLDKLA----PHSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred hcCCCCEEEEeecCCcccCHHHHHHHHHhC----CCCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 356799999999999999999888776553 25788999999999888 58999999999985
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.57 E-value=6.5e-06 Score=79.31 Aligned_cols=63 Identities=16% Similarity=0.231 Sum_probs=52.1
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
..++|.|+|+|+.|.++|.+..+++.+... +.+.+.+++ .|.-|. .+|+++.++|.+|+++..
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~----~~~~~~i~~-gH~~~~-e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIP----NAELHIIDD-GHLFLI-TRAEAVAPIIMKFLAEER 267 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCC----CCEEEEEcC-CCchhh-ccHHHHHHHHHHHHHHhh
Confidence 467899999999999999999998887653 245566665 898776 699999999999999754
No 24
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.56 E-value=1.3e-05 Score=84.78 Aligned_cols=64 Identities=14% Similarity=0.250 Sum_probs=57.0
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
..++|.|+|+|++|.++|.+..+.+++.. -+++++.+++++|+.++-.+|+++.+.|.+||+..
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~i----P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKV----PRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhC----CCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 35799999999999999999999887764 24789999999999999999999999999999764
No 25
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.52 E-value=1.9e-06 Score=81.99 Aligned_cols=219 Identities=15% Similarity=0.114 Sum_probs=123.8
Q ss_pred CCCCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccc-----cccccccchhhHHHHHHHHHHHHhccCCCCEEEE
Q 015271 21 ASFRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHF-----LDAFYPERATSLAFVLINELVEELRIQTCPVVFV 95 (410)
Q Consensus 21 ~~~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~-----~~l~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H 95 (410)
++.+.+.+|+|.+|+.. .+.--.+.-++.||+|...+-+- .+|+.. ...++-.++.+..-.-.+..-..|.+-
T Consensus 13 ~G~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t-~~~DW~~~v~d~Y~~L~~~gy~eI~v~ 90 (243)
T COG1647 13 GGNRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKT-TPRDWWEDVEDGYRDLKEAGYDEIAVV 90 (243)
T ss_pred cCCEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcC-CHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 55789999999999763 34444444558899987765431 122222 122333333333222111222349999
Q ss_pred EecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh-hHhh-hhc-cCcccccCcchhHHHHHHH
Q 015271 96 ALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS-DFCA-RFG-LHPTIQKIPGLSKLVSWVA 172 (410)
Q Consensus 96 ~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~-~l~~-~~~-~~~~l~k~~~~p~l~~wv~ 172 (410)
++|+||...+. +.+ +. +++++|.=|+|....+ ..-. .++ ......+..... ...+-
T Consensus 91 GlSmGGv~alk-la~--------~~----------p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~--~e~~~ 149 (243)
T COG1647 91 GLSMGGVFALK-LAY--------HY----------PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKD--QEQID 149 (243)
T ss_pred eecchhHHHHH-HHh--------hC----------CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCC--HHHHH
Confidence 99999942222 221 11 7999999999987522 1110 000 000000000000 00000
Q ss_pred HhhhhhcccccccccccchHHHH---HHh-hcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcc
Q 015271 173 KGVTSGLDGLCLTRFEPQRAEYW---RAL-YNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPH 248 (410)
Q Consensus 173 ~~i~~~l~~lf~~~~~~~~~~~~---~~l-~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~H 248 (410)
+- ..... .....+.+.+. ... -+......|.+++-+++|++||.+..+-+.++... .+.++..+++|.|
T Consensus 150 ~e-~~~~~----~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--~~KeL~~~e~SgH 222 (243)
T COG1647 150 KE-MKSYK----DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES--DDKELKWLEGSGH 222 (243)
T ss_pred HH-HHHhh----cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC--CcceeEEEccCCc
Confidence 00 00000 00000111111 111 11244678999999999999999999999988643 4788999999999
Q ss_pred cchhhcCHHHHHHHHHHHHHH
Q 015271 249 IGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 249 V~H~r~hPeeY~~aV~~Fl~k 269 (410)
|--.-...+.-.++|..||++
T Consensus 223 VIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 223 VITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred eeecchhHHHHHHHHHHHhhC
Confidence 998888999999999999973
No 26
>PLN02511 hydrolase
Probab=98.50 E-value=1e-05 Score=83.06 Aligned_cols=77 Identities=19% Similarity=0.187 Sum_probs=58.0
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHH-HHHHHHHcCCCeEEEEcCCCcccchhhcCHHH------HHHHHHHHHHHHhhhh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYN-FARHLLALGGDVKLVKLNGSPHIGHYEYYPIQ------YRAAITGLLEKAASVY 274 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~-~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPee------Y~~aV~~Fl~ka~~~~ 274 (410)
...++|.|+|+|++|+++|.+.+.. .++ ..-.++++..++++|++++.. |+. +.+.|.+|++......
T Consensus 295 ~~I~vPtLiI~g~dDpi~p~~~~~~~~~~----~~p~~~l~~~~~gGH~~~~E~-p~~~~~~~w~~~~i~~Fl~~~~~~~ 369 (388)
T PLN02511 295 KHVRVPLLCIQAANDPIAPARGIPREDIK----ANPNCLLIVTPSGGHLGWVAG-PEAPFGAPWTDPVVMEFLEALEEGK 369 (388)
T ss_pred ccCCCCeEEEEcCCCCcCCcccCcHhHHh----cCCCEEEEECCCcceeccccC-CCCCCCCccHHHHHHHHHHHHHHhc
Confidence 4578999999999999999876532 222 234688999999999999864 444 4788999999887776
Q ss_pred hhHhhhhcc
Q 015271 275 SQRIRQLGE 283 (410)
Q Consensus 275 ~~~~~~~~~ 283 (410)
.+....|..
T Consensus 370 ~~~~~~~~~ 378 (388)
T PLN02511 370 SSTPAFNSS 378 (388)
T ss_pred ccccccccc
Confidence 655555543
No 27
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.50 E-value=3.5e-06 Score=91.76 Aligned_cols=209 Identities=14% Similarity=0.091 Sum_probs=125.7
Q ss_pred cEEEEecccC-Cch-hHHHHHHHHHHhcCCeEEEEccccccc-c-------cccc---hhhHHHHHHHHHHHHhccCCCC
Q 015271 25 GIVVLFSWVS-VHE-HQLRSFVDLYSSLGWNSLVSNSHFLDA-F-------YPER---ATSLAFVLINELVEELRIQTCP 91 (410)
Q Consensus 25 pLVIL~GW~g-A~~-rhL~KY~~lY~~lG~n~Llv~s~~~~l-~-------~p~~---~~~~A~~vL~eL~~~~~~~~~p 91 (410)
|+|+.+...- ++. .-..-+.+.|...||.|+....+-.+- + .-+. ...-+.+.++.+.+.....+..
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 474 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPER 474 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHH
Confidence 6666655442 221 236778889999999999998663221 1 1111 2222333444332222112234
Q ss_pred EEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHHHHH
Q 015271 92 VVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVSWV 171 (410)
Q Consensus 92 Iv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~~wv 171 (410)
|.+-+.|-||++.+..+.+ .+..++.|-..++++....+..- ....+ +.+. .
T Consensus 475 i~i~G~SyGGymtl~~~~~------------------~~~f~a~~~~~~~~~~~~~~~~~-----~~~~~-~~~~--~-- 526 (620)
T COG1506 475 IGITGGSYGGYMTLLAATK------------------TPRFKAAVAVAGGVDWLLYFGES-----TEGLR-FDPE--E-- 526 (620)
T ss_pred eEEeccChHHHHHHHHHhc------------------CchhheEEeccCcchhhhhcccc-----chhhc-CCHH--H--
Confidence 9999999888743332111 12467777777777765433220 01000 0000 0
Q ss_pred HHhhhhhcccccccccccchHHHHHH--hhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCccc
Q 015271 172 AKGVTSGLDGLCLTRFEPQRAEYWRA--LYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHI 249 (410)
Q Consensus 172 ~~~i~~~l~~lf~~~~~~~~~~~~~~--l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV 249 (410)
. . ..... ....|+.. .......++|.|+|||++|..||.+..+.++++++++|.+|+++.|++..|.
T Consensus 527 ~---~-------~~~~~-~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 527 N---G-------GGPPE-DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred h---C-------CCccc-ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 0 0 00000 22333332 1223567899999999999999999999999999999999999999999998
Q ss_pred chhhcCHHHHHHHHHHHHHHHhh
Q 015271 250 GHYEYYPIQYRAAITGLLEKAAS 272 (410)
Q Consensus 250 ~H~r~hPeeY~~aV~~Fl~ka~~ 272 (410)
=-...|-.+..+.+.+|+++.++
T Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 596 FSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred CCCchhHHHHHHHHHHHHHHHhc
Confidence 65556677777788888887654
No 28
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.49 E-value=9.6e-06 Score=79.05 Aligned_cols=223 Identities=16% Similarity=0.082 Sum_probs=115.3
Q ss_pred CCCcEEEEecccCC---chhHHHHHHHHHHhcCCeEEEEccccccc-----ccccchhhHHHHHHHHHHHHhccCCCCEE
Q 015271 22 SFRGIVVLFSWVSV---HEHQLRSFVDLYSSLGWNSLVSNSHFLDA-----FYPERATSLAFVLINELVEELRIQTCPVV 93 (410)
Q Consensus 22 ~~kpLVIL~GW~gA---~~rhL~KY~~lY~~lG~n~Llv~s~~~~l-----~~p~~~~~~A~~vL~eL~~~~~~~~~pIv 93 (410)
..+++|+++|+.+. ..+.....++.+.+.||+++.++-+-..- ...+....-+..+++++.+..+.. .+|+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~-~~i~ 103 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHL-RRIV 103 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC-CcEE
Confidence 45789999998752 23444566788889999999998542111 111111112233444444433222 2499
Q ss_pred EEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhh----hhccCcccccCcchhHH--
Q 015271 94 FVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCA----RFGLHPTIQKIPGLSKL-- 167 (410)
Q Consensus 94 ~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~----~~~~~~~l~k~~~~p~l-- 167 (410)
+.+.|+||...+..+.. .++|+|+|+-|++......... .+.. ..+........+
T Consensus 104 l~G~S~Gg~~a~~~a~~------------------~~~v~~lil~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 164 (274)
T TIGR03100 104 AWGLCDAASAALLYAPA------------------DLRVAGLVLLNPWVRTEAAQAASRIRHYYL-GQLLSADFWRKLLS 164 (274)
T ss_pred EEEECHHHHHHHHHhhh------------------CCCccEEEEECCccCCcccchHHHHHHHHH-HHHhChHHHHHhcC
Confidence 99999888422221110 1389999999987542210000 0000 000000000000
Q ss_pred ----HHHHHHhhhhhcc-c--cc-ccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHH--HHHHHH-cC-
Q 015271 168 ----VSWVAKGVTSGLD-G--LC-LTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNF--ARHLLA-LG- 235 (410)
Q Consensus 168 ----~~wv~~~i~~~l~-~--lf-~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~--a~~ar~-~G- 235 (410)
..-+.+.+...+. . .- ........++.+..+ ...++|.|++||..|..++ +..+.+ ..++++ .+
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~ 240 (274)
T TIGR03100 165 GEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGL---ERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALED 240 (274)
T ss_pred CCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHH---HhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhc
Confidence 0000000110000 0 00 000000122222222 1346899999999999863 222211 133333 23
Q ss_pred CCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 236 GDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 236 ~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
-.|+.+.++++.|+-+....+++..+.|.+||+
T Consensus 241 ~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 241 PGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred CCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999996
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.46 E-value=1.3e-05 Score=72.71 Aligned_cols=60 Identities=27% Similarity=0.408 Sum_probs=46.6
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
..++|.|+|++++|.+++ + ..+.+.+....++.+.++++.|.-++ .+|++..+.|.+|++
T Consensus 192 ~~~~P~l~i~g~~D~~~~-~----~~~~~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 192 ALTIPVLYLCGEKDEKFV-Q----IAKEMQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFLE 251 (251)
T ss_pred CCCCceEEEeeCcchHHH-H----HHHHHHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHhC
Confidence 467899999999998763 2 33344444456788899999999887 569999999999973
No 30
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.46 E-value=3e-05 Score=75.27 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=52.3
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
..++|.|+|+|++|.+++.....+.+.+... ..+.+.++++.|.-|+ .+|++-.++|.+|+++..
T Consensus 226 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 226 TSDVPKLLINAEPGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQE-DSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred cCCCCeEEEeccCCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhh-cCHHHHHHHHHHHHHHhc
Confidence 4578999999999999966666666544322 3578888999999996 679999999999998764
No 31
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.44 E-value=1.5e-05 Score=74.73 Aligned_cols=61 Identities=30% Similarity=0.337 Sum_probs=49.4
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
+.|.+++||++|+++|.+..++.++.+++.|.+|+.+.|++..|-- . .+..+.+.+||++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i----~-~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI----S-PEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC----C-HHHHHHHHHHHhhh
Confidence 5799999999999999999999999999999999999999999954 2 45557789998875
No 32
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.37 E-value=8.1e-05 Score=70.27 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=51.0
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
..++|.|+|++++|.++|.+.++++++... .++.+.++++.|.-++ .+|+++.++|.+|++
T Consensus 218 ~i~~P~lii~g~~D~~vp~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 218 RITIPLHLIAGEEDKAVPPDESKRAATRVP----TATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred cCCCCEEEEEeCCCcccCHHHHHHHHHhcc----CCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 457899999999999999999888876643 3567888999998665 579999999999974
No 33
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.33 E-value=2.8e-05 Score=73.75 Aligned_cols=63 Identities=16% Similarity=0.268 Sum_probs=51.9
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
....+|.|+|+|+.|.++|.+..+.+.+.. -..+.+.+++++|.-++ .+|++..++|.+|-++
T Consensus 193 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~i----~~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 193 QNVSMPFLRLYGYLDGLVPRKVVPMLDKLW----PHSESYIFAKAAHAPFI-SHPAEFCHLLVALKQR 255 (256)
T ss_pred hhcCCCeEEEecCCCccCCHHHHHHHHHhC----CCCeEEEeCCCCCCccc-cCHHHHHHHHHHHhcc
Confidence 346799999999999999998877666553 23578889999999888 7999999999998653
No 34
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.32 E-value=4.2e-05 Score=76.71 Aligned_cols=66 Identities=18% Similarity=0.176 Sum_probs=55.0
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCC-CcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG-SPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~-S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
...++|.|+|+++.|.++|.++++++++... -..+++.+++ ++|.-++ .+|++..+.|.+|++++.
T Consensus 274 ~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~---p~a~l~~i~~~aGH~~~l-E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 274 EAIRVPTVVVAVEGDRLVPLADLVELAEGLG---PRGSLRVLRSPYGHDAFL-KETDRIDAILTTALRSTG 340 (343)
T ss_pred hcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC---CCCeEEEEeCCccHHHHh-cCHHHHHHHHHHHHHhcc
Confidence 3567899999999999999999888777642 2467888984 9999888 489999999999998753
No 35
>PLN02965 Probable pheophorbidase
Probab=98.32 E-value=8.3e-05 Score=70.87 Aligned_cols=63 Identities=13% Similarity=0.068 Sum_probs=54.0
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
..++|.|+|++++|.++|.+..+.+++... ..+.+.+++++|.-|+ .+|++..++|.+|+++.
T Consensus 191 ~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~----~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 191 AEKVPRVYIKTAKDNLFDPVRQDVMVENWP----PAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSSL 253 (255)
T ss_pred cCCCCEEEEEcCCCCCCCHHHHHHHHHhCC----cceEEEecCCCCchhh-cCHHHHHHHHHHHHHHh
Confidence 467899999999999999988887776542 3468889999999887 89999999999998765
No 36
>PRK06489 hypothetical protein; Provisional
Probab=98.32 E-value=3.7e-05 Score=77.68 Aligned_cols=64 Identities=20% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCCCcEEEEeeCCCCccCHHHH--HHHHHHHHHcCCCeEEEEcCCC----cccchhhcCHHHHHHHHHHHHHHHhh
Q 015271 203 DLGTPFLIICSDNDELAPQQVI--YNFARHLLALGGDVKLVKLNGS----PHIGHYEYYPIQYRAAITGLLEKAAS 272 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dV--e~~a~~ar~~G~~V~l~~Fe~S----~HV~H~r~hPeeY~~aV~~Fl~ka~~ 272 (410)
..++|.|+|++++|.++|.+.. +++++... +.+++.++++ .|+-| .+|++|.++|.+|+++..+
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT--GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc--cCHHHHHHHHHHHHHhccc
Confidence 4679999999999999999875 55555432 3578899996 99886 5999999999999987643
No 37
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.32 E-value=6.8e-05 Score=73.26 Aligned_cols=58 Identities=22% Similarity=0.198 Sum_probs=47.2
Q ss_pred CCcEEEEeeCCCCccCHHHH-HHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVI-YNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 267 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dV-e~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl 267 (410)
++|.|+|++++|.+++..++ +++.+.. -+.+.+.++++.|.-|+ .+|++..+.|.+|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i----p~~~~~~i~~aGH~~~~-e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF----PDHVLVELPNAKHFIQE-DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc----CCCeEEEcCCCcccccc-cCHHHHHHHHHHhc
Confidence 79999999999999976653 4444433 23678899999999877 79999999999997
No 38
>PRK11071 esterase YqiA; Provisional
Probab=98.30 E-value=8.6e-05 Score=68.89 Aligned_cols=55 Identities=13% Similarity=0.059 Sum_probs=46.0
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
.+.|.++|++++|++||++...++++.+ +....+|+.|.= .+.++|+..+.+|++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~ggdH~f---~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEEGGNHAF---VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEECCCCcch---hhHHHhHHHHHHHhc
Confidence 5668889999999999999999999953 344568888764 777999999999975
No 39
>PRK10985 putative hydrolase; Provisional
Probab=98.29 E-value=7.3e-05 Score=74.54 Aligned_cols=64 Identities=20% Similarity=0.256 Sum_probs=46.7
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcC---HHHH-HHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY---PIQY-RAAITGLLEK 269 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~h---PeeY-~~aV~~Fl~k 269 (410)
...++|.|+|++++|++++.+.++.+.+. --+++.+.+++++|++++... +..| .+.|.+|++.
T Consensus 252 ~~i~~P~lii~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 252 NQIRKPTLIIHAKDDPFMTHEVIPKPESL----PPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred hCCCCCEEEEecCCCCCCChhhChHHHHh----CCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 45678999999999999999888765322 235788999999999999752 3322 2456666654
No 40
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.28 E-value=6e-05 Score=70.48 Aligned_cols=53 Identities=26% Similarity=0.355 Sum_probs=42.3
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCH
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYP 256 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hP 256 (410)
.++|.|++++++|+++|.+.++++.+.+++.|.+++.+.|++..|-=..+..+
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 45799999999999999999999999999999999999999999986666655
No 41
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.24 E-value=9.2e-05 Score=72.35 Aligned_cols=66 Identities=15% Similarity=0.181 Sum_probs=51.2
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
....+|.|+|+++.|.++|.+. +++.+..... ..++.+.++++.|.-| -.+|++..+.|.+|+++.
T Consensus 236 ~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 236 ERWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFLQ-EDSGEELAEAVLEFIRAT 301 (302)
T ss_pred hcCCCceEEEecCCCCcccCch-HHHHhhcccc-cccceeeecCCCccch-hhChHHHHHHHHHHHhcC
Confidence 3567999999999999999866 6666654321 1245678999999965 588899999999999753
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.23 E-value=0.00017 Score=71.75 Aligned_cols=226 Identities=16% Similarity=0.185 Sum_probs=123.2
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEccccccccc-ccc----hhhHHHHHHHHHHHHhc--cCCCCEEEE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFY-PER----ATSLAFVLINELVEELR--IQTCPVVFV 95 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~-p~~----~~~~A~~vL~eL~~~~~--~~~~pIv~H 95 (410)
++++|||+..++-........++.+...||.|+.++-+-...-. ... ..+...+.++++++... ....|+++-
T Consensus 33 ~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~ 112 (298)
T COG2267 33 PKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLL 112 (298)
T ss_pred CCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEE
Confidence 44788887766655444455566788999999999855322221 111 12223344455555432 245689999
Q ss_pred EecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh---hHhh-hhc------cCcccccCcc--
Q 015271 96 ALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS---DFCA-RFG------LHPTIQKIPG-- 163 (410)
Q Consensus 96 ~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~---~l~~-~~~------~~~~l~k~~~-- 163 (410)
+-|+||..++.-+.+ . ..+|.|+|+=|+--.... .... ++. +.+.++....
T Consensus 113 gHSmGg~Ia~~~~~~-----------~------~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 175 (298)
T COG2267 113 GHSMGGLIALLYLAR-----------Y------PPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLL 175 (298)
T ss_pred EeCcHHHHHHHHHHh-----------C------CccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccc
Confidence 999888433331221 0 148999999776443331 0000 000 1111110000
Q ss_pred hhHHHHHHHHh--hhh--hcccccccccccchHHHHHH----------hhcCCCCCCcEEEEeeCCCCccCH-HHHHHHH
Q 015271 164 LSKLVSWVAKG--VTS--GLDGLCLTRFEPQRAEYWRA----------LYNSVDLGTPFLIICSDNDELAPQ-QVIYNFA 228 (410)
Q Consensus 164 ~p~l~~wv~~~--i~~--~l~~lf~~~~~~~~~~~~~~----------l~s~~~~~~P~LyIYS~~D~LVp~-~dVe~~a 228 (410)
......|+.+. ... .-+.+. .+. .....|.. .........|.|++++++|.+++. +...+++
T Consensus 176 ~~~~~~~~sr~~~~~~~~~~dP~~--~~~-~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~ 252 (298)
T COG2267 176 EGVLTDDLSRDPAEVAAYEADPLI--GVG-GPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFF 252 (298)
T ss_pred cCcCcchhhcCHHHHHHHhcCCcc--ccC-CccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHH
Confidence 00000000000 000 000000 000 01111110 011345678999999999999995 6666665
Q ss_pred HHHHHcCC-CeEEEEcCCCcccchhhcCH--HHHHHHHHHHHHHHh
Q 015271 229 RHLLALGG-DVKLVKLNGSPHIGHYEYYP--IQYRAAITGLLEKAA 271 (410)
Q Consensus 229 ~~ar~~G~-~V~l~~Fe~S~HV~H~r~hP--eeY~~aV~~Fl~ka~ 271 (410)
+++ |. +++++.++++-|--|...+. +++++.+.+|+.+..
T Consensus 253 ~~~---~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 253 ERA---GSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred Hhc---CCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 554 43 38999999999999999999 999999999998764
No 43
>PRK10162 acetyl esterase; Provisional
Probab=98.23 E-value=0.0002 Score=71.59 Aligned_cols=233 Identities=14% Similarity=0.084 Sum_probs=116.4
Q ss_pred ccccCCCCCCCCcEEEEec--ccCCchhHHHHHHHHHHh-cCCeEEEEcccccc-cccccchhhHHHHHHHHHHHH---h
Q 015271 13 SLYWGRKAASFRGIVVLFS--WVSVHEHQLRSFVDLYSS-LGWNSLVSNSHFLD-AFYPERATSLAFVLINELVEE---L 85 (410)
Q Consensus 13 ~~~w~~~~~~~kpLVIL~G--W~gA~~rhL~KY~~lY~~-lG~n~Llv~s~~~~-l~~p~~~~~~A~~vL~eL~~~---~ 85 (410)
++|.+. ....+.+|.++| |.......-........+ .|+.|+.++.+... .-+|. ...-+..+++++.+. .
T Consensus 72 ~~y~P~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~-~~~D~~~a~~~l~~~~~~~ 149 (318)
T PRK10162 72 RLYYPQ-PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ-AIEEIVAVCCYFHQHAEDY 149 (318)
T ss_pred EEECCC-CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC-cHHHHHHHHHHHHHhHHHh
Confidence 566663 222334666777 443333333445555544 69999999876432 12232 233344455555443 2
Q ss_pred ccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchh
Q 015271 86 RIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLS 165 (410)
Q Consensus 86 ~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p 165 (410)
...+..|++-+.|.||..++....++-+ . . .-...++++|+-++..+....-.... ...... ....
T Consensus 150 ~~d~~~i~l~G~SaGG~la~~~a~~~~~-~---~-------~~~~~~~~~vl~~p~~~~~~~~s~~~-~~~~~~--~l~~ 215 (318)
T PRK10162 150 GINMSRIGFAGDSAGAMLALASALWLRD-K---Q-------IDCGKVAGVLLWYGLYGLRDSVSRRL-LGGVWD--GLTQ 215 (318)
T ss_pred CCChhHEEEEEECHHHHHHHHHHHHHHh-c---C-------CCccChhheEEECCccCCCCChhHHH-hCCCcc--ccCH
Confidence 2223459999999887433332222111 0 0 00136788888887665422100000 000000 0001
Q ss_pred HHHHHHHHhhhhhcccccccccccchHHHHHHhhcCC-CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcC
Q 015271 166 KLVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSV-DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLN 244 (410)
Q Consensus 166 ~l~~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~-~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe 244 (410)
.-+.|....++. ..-.... -+...+.... ..-.|.++++++.|.+. ++.+++++++++.|.+|+.+.|+
T Consensus 216 ~~~~~~~~~y~~-------~~~~~~~-p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~ 285 (318)
T PRK10162 216 QDLQMYEEAYLS-------NDADRES-PYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYP 285 (318)
T ss_pred HHHHHHHHHhCC-------CccccCC-cccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEEC
Confidence 112233211110 0000000 0000000001 11248899999999997 47899999999999999999999
Q ss_pred CCcccchhhcC-HH---HHHHHHHHHHHHHh
Q 015271 245 GSPHIGHYEYY-PI---QYRAAITGLLEKAA 271 (410)
Q Consensus 245 ~S~HV~H~r~h-Pe---eY~~aV~~Fl~ka~ 271 (410)
+..|.=..... -+ +-++.+.+|+++..
T Consensus 286 g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 286 GTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred CCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 99997543322 12 33344455655543
No 44
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.23 E-value=0.00021 Score=67.03 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=51.7
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
..++|.|+|+++.|.+++.+..+.+++.. -+++.+.++++.|.-+ ..+|+++.+.|.+|+++
T Consensus 193 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 193 AWPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIAGAGHWVH-AEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCCCeee-ccCHHHHHHHHHHHHhc
Confidence 45789999999999999988777776653 3567888999999755 56799999999999975
No 45
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.20 E-value=0.00014 Score=73.02 Aligned_cols=234 Identities=20% Similarity=0.265 Sum_probs=125.7
Q ss_pred cccCCCCCC-CCcEEEEec-ccCC-chhHHHHHHHHHHhcCCeEEEEcccc-------cccccccchhhHHHHHHHHHHH
Q 015271 14 LYWGRKAAS-FRGIVVLFS-WVSV-HEHQLRSFVDLYSSLGWNSLVSNSHF-------LDAFYPERATSLAFVLINELVE 83 (410)
Q Consensus 14 ~~w~~~~~~-~kpLVIL~G-W~gA-~~rhL~KY~~lY~~lG~n~Llv~s~~-------~~l~~p~~~~~~A~~vL~eL~~ 83 (410)
..|--++.. .+|+||++. =.|+ +...+.--.+..++.||.+++++.+- ...++......-+..+++.+..
T Consensus 64 ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~ 143 (345)
T COG0429 64 LDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKA 143 (345)
T ss_pred EeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHH
Confidence 567754433 455555554 4443 33455666677789999999987541 1111111111223445555555
Q ss_pred HhccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcc
Q 015271 84 ELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPG 163 (410)
Q Consensus 84 ~~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~ 163 (410)
... ++|+.+-+||.||. +++..|..+ +. | .++.+-+.=|.|-|+.. .+.++....+. +.-.
T Consensus 144 ~~~--~r~~~avG~SLGgn----mLa~ylgee--g~-d--------~~~~aa~~vs~P~Dl~~-~~~~l~~~~s~-~ly~ 204 (345)
T COG0429 144 RFP--PRPLYAVGFSLGGN----MLANYLGEE--GD-D--------LPLDAAVAVSAPFDLEA-CAYRLDSGFSL-RLYS 204 (345)
T ss_pred hCC--CCceEEEEecccHH----HHHHHHHhh--cc-C--------cccceeeeeeCHHHHHH-HHHHhcCchhh-hhhH
Confidence 443 46799999997773 112222111 11 1 15677777788887721 11111111110 0000
Q ss_pred ---hhHHH------------------HHHHHh--hhhhccccccc-ccc-cchHHHHHHhhc---CCCCCCcEEEEeeCC
Q 015271 164 ---LSKLV------------------SWVAKG--VTSGLDGLCLT-RFE-PQRAEYWRALYN---SVDLGTPFLIICSDN 215 (410)
Q Consensus 164 ---~p~l~------------------~wv~~~--i~~~l~~lf~~-~~~-~~~~~~~~~l~s---~~~~~~P~LyIYS~~ 215 (410)
...+. .-..++ -++-++.++.. ++. +...+||.+.-+ ...+.+|.|+||+.+
T Consensus 205 r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~D 284 (345)
T COG0429 205 RYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKD 284 (345)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCC
Confidence 00000 001111 11222222211 111 234567765322 256788999999999
Q ss_pred CCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhc---CHHHH-HHHHHHHHHH
Q 015271 216 DELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEY---YPIQY-RAAITGLLEK 269 (410)
Q Consensus 216 D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~---hPeeY-~~aV~~Fl~k 269 (410)
|++++.+.|.+.... ..-.|.+...+..+|||-+-. ||.-| ++.+-+|++.
T Consensus 285 DP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 285 DPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 999999999887765 345799999999999999883 44422 2345555554
No 46
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.18 E-value=0.00026 Score=71.78 Aligned_cols=67 Identities=21% Similarity=0.277 Sum_probs=53.0
Q ss_pred CCCCcEEEEeeCCCCccCHHH-HHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQV-IYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~d-Ve~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
..++|.|+|+|++|.++|.+. +.++++++.+.=-+++++.++++.|.-|+ .+|++..+.|.+|+++.
T Consensus 290 ~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~-E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 290 RISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD-DRPDLVHEKLLPWLAQL 357 (360)
T ss_pred hcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc-cCHHHHHHHHHHHHHhc
Confidence 457899999999999999874 33444444333245789999999999876 56999999999999864
No 47
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.15 E-value=0.00022 Score=73.71 Aligned_cols=69 Identities=12% Similarity=0.097 Sum_probs=52.6
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhhhh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYS 275 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~ 275 (410)
...++|.|+|||+.|.+++ +..++..+. .+..++.+.++++.|.-|+ .+|+++.++|.+|++.....-.
T Consensus 322 ~~I~vP~liI~G~~D~i~~-~~~~~~~~~---~~~~~~~~~i~~aGH~~~~-E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 322 SEWKVPTTFIYGRHDWMNY-EGAVEARKR---MKVPCEIIRVPQGGHFVFL-DNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred ccCCCCEEEEEeCCCCCCc-HHHHHHHHH---cCCCCcEEEeCCCCCeeec-cCHHHHHHHHHHHHHHhccCCc
Confidence 3457899999999998876 555544433 2445789999999998555 5999999999999987665543
No 48
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.15 E-value=0.0001 Score=74.14 Aligned_cols=64 Identities=22% Similarity=0.296 Sum_probs=51.4
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcC--HHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY--PIQYRAAITGLLEK 269 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~h--PeeY~~aV~~Fl~k 269 (410)
..++|.|++++++|.++|++.++.+.+... +.+++.+.++ +.|.+.+... +++=|..|.+|+++
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVS--SEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcC--CCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 457899999999999999999998888643 2456677776 7999988765 57788888898864
No 49
>PLN02578 hydrolase
Probab=98.14 E-value=0.00032 Score=70.75 Aligned_cols=61 Identities=23% Similarity=0.248 Sum_probs=49.0
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
...++|.|+|++++|.++|.+..+++.+... + .+++.+ ++.|+-|. .+|+++.++|.+|++
T Consensus 293 ~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p--~--a~l~~i-~~GH~~~~-e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 293 SKLSCPLLLLWGDLDPWVGPAKAEKIKAFYP--D--TTLVNL-QAGHCPHD-EVPEQVNKALLEWLS 353 (354)
T ss_pred hcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--C--CEEEEe-CCCCCccc-cCHHHHHHHHHHHHh
Confidence 3468999999999999999999888766542 2 345555 58999764 699999999999986
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.13 E-value=0.00012 Score=87.93 Aligned_cols=67 Identities=19% Similarity=0.313 Sum_probs=51.9
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHc-------C-CCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLAL-------G-GDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~-------G-~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
..++|.|+|+|++|.+++ +..+++.+...+. + ..++++.+++++|.-|+ .+|+++.++|.+||++..
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-E~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-ENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH-HCHHHHHHHHHHHHHhcc
Confidence 457899999999999886 4555555443221 0 13789999999999887 789999999999999743
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.13 E-value=0.00014 Score=73.04 Aligned_cols=63 Identities=19% Similarity=0.161 Sum_probs=54.9
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
..+|.|+|+|++|.+++.+..+++++++.. .+++++.++++.|.-+...++++..+.|.+|++
T Consensus 269 ~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 269 KDIPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 368999999999999999999988876532 357888999999999999889999999999985
No 52
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.12 E-value=0.00013 Score=71.71 Aligned_cols=57 Identities=23% Similarity=0.331 Sum_probs=43.8
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
++|.|+|++++|.++|.+..+++++... +.+++.++++.|.. .+|+.. ++|.+|++.
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~---~~~~~~-~~i~~~~~~ 304 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSA---FDPNNL-AALVHALET 304 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCC---CChHHH-HHHHHHHHH
Confidence 5899999999999999999888887743 35677888877775 577777 555555543
No 53
>PLN02442 S-formylglutathione hydrolase
Probab=98.10 E-value=0.0005 Score=67.60 Aligned_cols=63 Identities=21% Similarity=0.227 Sum_probs=52.7
Q ss_pred CCCCcEEEEeeCCCCccCHH-HHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhhhh
Q 015271 203 DLGTPFLIICSDNDELAPQQ-VIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYS 275 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~-dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~ 275 (410)
..+.|.|++++++|+++|.. ..+++++.+++.|.+++.+.+++..|. |..+..|+++..+-+.
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~----------~~~~~~~i~~~~~~~~ 278 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS----------YFFIATFIDDHINHHA 278 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc----------HHHHHHHHHHHHHHHH
Confidence 35679999999999999975 478899999999999999999999997 3477888877765543
No 54
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.02 E-value=0.00026 Score=71.21 Aligned_cols=65 Identities=26% Similarity=0.270 Sum_probs=53.5
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEE-EcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLV-KLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~-~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
..++|.|+|+++.|.++|.+.++++++........|+.+ .++++.|..++ .+|+++.++|.+||+
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-cCHHHHHHHHHHHhC
Confidence 457899999999999999999999998876543333333 45789999888 689999999999974
No 55
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.02 E-value=5.6e-05 Score=72.02 Aligned_cols=208 Identities=17% Similarity=0.182 Sum_probs=125.0
Q ss_pred ccCCCCCCCCcEEEEecccCCchhHHHHHHH-HHHhcCCeEEEEccc--cccccccc-chhh-HHHHHHHHHHHHhccCC
Q 015271 15 YWGRKAASFRGIVVLFSWVSVHEHQLRSFVD-LYSSLGWNSLVSNSH--FLDAFYPE-RATS-LAFVLINELVEELRIQT 89 (410)
Q Consensus 15 ~w~~~~~~~kpLVIL~GW~gA~~rhL~KY~~-lY~~lG~n~Llv~s~--~~~l~~p~-~~~~-~A~~vL~eL~~~~~~~~ 89 (410)
||-. ++..+|+++.|.-...+.-|-..-+. .|..++.|++++..+ -..-+.|. +++. -+..+|+.|.....-..
T Consensus 70 ~~~~-~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dk 148 (300)
T KOG4391|consen 70 YLML-SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDK 148 (300)
T ss_pred eeec-ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCc
Confidence 4554 33356766666544445555555554 489999999888755 34455553 3443 45567777776543334
Q ss_pred CCEEEEEec-ccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccC-cch-hH
Q 015271 90 CPVVFVALS-GGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKI-PGL-SK 166 (410)
Q Consensus 90 ~pIv~H~FS-gGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~-~~~-p~ 166 (410)
..|++.+-| ||+.| ++-+. ...+++.++|+.-+....... +++.. |++ +.
T Consensus 149 tkivlfGrSlGGAva-i~las-----------------k~~~ri~~~ivENTF~SIp~~---------~i~~v~p~~~k~ 201 (300)
T KOG4391|consen 149 TKIVLFGRSLGGAVA-IHLAS-----------------KNSDRISAIIVENTFLSIPHM---------AIPLVFPFPMKY 201 (300)
T ss_pred ceEEEEecccCCeeE-EEeec-----------------cchhheeeeeeechhccchhh---------hhheeccchhhH
Confidence 569999999 55532 12101 123488899988763322110 11100 111 11
Q ss_pred HHHHHHHhhhhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCC
Q 015271 167 LVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGS 246 (410)
Q Consensus 167 l~~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S 246 (410)
+..|-.+ +.|..++ .. ...+.|.|||-+.+|++||+.+...+++..-. ...++..|++.
T Consensus 202 i~~lc~k-----------n~~~S~~------ki--~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S--~~Krl~eFP~g 260 (300)
T KOG4391|consen 202 IPLLCYK-----------NKWLSYR------KI--GQCRMPFLFISGLKDELVPPVMMRQLYELCPS--RTKRLAEFPDG 260 (300)
T ss_pred HHHHHHH-----------hhhcchh------hh--ccccCceEEeecCccccCCcHHHHHHHHhCch--hhhhheeCCCC
Confidence 1112211 1111111 11 23567999999999999999999999987532 23568899999
Q ss_pred cccchhhcCHHHHHHHHHHHHHHHhhh
Q 015271 247 PHIGHYEYYPIQYRAAITGLLEKAASV 273 (410)
Q Consensus 247 ~HV~H~r~hPeeY~~aV~~Fl~ka~~~ 273 (410)
.|-.-+-. +-||++|.+||......
T Consensus 261 tHNDT~i~--dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 261 THNDTWIC--DGYFQAIEDFLAEVVKS 285 (300)
T ss_pred ccCceEEe--ccHHHHHHHHHHHhccC
Confidence 99776665 47999999999987663
No 56
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.01 E-value=0.00068 Score=66.09 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=50.3
Q ss_pred CCcEEEEeeCCCCccCH-HHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhhhh
Q 015271 205 GTPFLIICSDNDELAPQ-QVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYS 275 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~-~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~ 275 (410)
..|.++.|+++|+++|. ...+.+.+.+++.|.+++...+++..|. |..+..|+.+.+..++
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~----------f~~~~~~~~~~~~~~~ 272 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHS----------YYFIASFIADHLRHHA 272 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCcc----------chhHHHhHHHHHHHHH
Confidence 45888889999999999 6788999999999999999999999998 4556666666655543
No 57
>COG0400 Predicted esterase [General function prediction only]
Probab=98.00 E-value=0.00025 Score=67.28 Aligned_cols=61 Identities=26% Similarity=0.330 Sum_probs=50.4
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
...|.|.+|++.|++||....++..+..++.|.+|+.+.++ ..|- -.++++ +++.+||.+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~----i~~e~~-~~~~~wl~~~ 205 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHE----IPPEEL-EAARSWLANT 205 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCc----CCHHHH-HHHHHHHHhc
Confidence 45799999999999999999999999999999999999988 6663 344444 6666777764
No 58
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=97.95 E-value=0.0013 Score=67.16 Aligned_cols=68 Identities=25% Similarity=0.340 Sum_probs=59.2
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEc-CCCcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKL-NGSPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~F-e~S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
.+++|.|+|++++|.++|.+..+++++.....+.+++++.+ ++++|..++ .+|+++.++|.+||+++.
T Consensus 307 ~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 307 RIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL-LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred cCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-cCHHHHHHHHHHHHHhhh
Confidence 46789999999999999999999999988776667777766 499999665 899999999999999853
No 59
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.95 E-value=0.0017 Score=63.25 Aligned_cols=60 Identities=12% Similarity=0.120 Sum_probs=48.4
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
++|.|||++++|.++|.+..+.+++... |. +.+..+ +.|.-++ .+|++-.+.|.++...+
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~--~~~~l~-~gH~p~l-s~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP--PS--QVYELE-SDHSPFF-STPFLLFGLLIKAAASV 270 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC--cc--EEEEEC-CCCCccc-cCHHHHHHHHHHHHHHh
Confidence 6799999999999999999888887642 33 455665 7898777 89999999998886554
No 60
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.92 E-value=0.0001 Score=71.69 Aligned_cols=66 Identities=17% Similarity=0.191 Sum_probs=53.7
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 272 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~ 272 (410)
...++|+|++||++|++||+..-.++++.++++ ++-..-++..|+.-.+. .+|...+..|+.....
T Consensus 189 ~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~~~--~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 189 SKITCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIELY--PEYIEHLRRFISSVLP 254 (258)
T ss_pred eeccCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCcccccC--HHHHHHHHHHHHHhcc
Confidence 456789999999999999999999999998765 55666678999876553 4788888888876643
No 61
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.90 E-value=0.00029 Score=67.92 Aligned_cols=167 Identities=17% Similarity=0.199 Sum_probs=102.5
Q ss_pred ccCCC-CCC-CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEccc-----ccccc-------c-------ccchhhH
Q 015271 15 YWGRK-AAS-FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSH-----FLDAF-------Y-------PERATSL 73 (410)
Q Consensus 15 ~w~~~-~~~-~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~-----~~~l~-------~-------p~~~~~~ 73 (410)
||-+- +.+ .+.|||++.|.|-++ |+..+++...+.||.+++.+.- ....- . +......
T Consensus 17 ~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 95 (236)
T COG0412 17 YLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLAD 95 (236)
T ss_pred EEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHH
Confidence 55533 344 367899999999998 8999999999999999876521 11000 0 0111122
Q ss_pred HHHHHHHHHHHhccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhc
Q 015271 74 AFVLINELVEELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFG 153 (410)
Q Consensus 74 A~~vL~eL~~~~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~ 153 (410)
+...+++|..........|.+-+||+||...+..+.. ++ .+++.| .
T Consensus 96 ~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~----------~~--------~v~a~v----------------~ 141 (236)
T COG0412 96 IDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR----------AP--------EVKAAV----------------A 141 (236)
T ss_pred HHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc----------cC--------CccEEE----------------E
Confidence 3334444443321223459999999777422221110 00 121111 0
Q ss_pred cCcccccCcchhHHHHHHHHhhhhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHH
Q 015271 154 LHPTIQKIPGLSKLVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLA 233 (410)
Q Consensus 154 ~~~~l~k~~~~p~l~~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~ 233 (410)
+.++... ... ......++|.|+++++.|..+|.+.++.+.++.++
T Consensus 142 fyg~~~~----------------------------~~~-------~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~ 186 (236)
T COG0412 142 FYGGLIA----------------------------DDT-------ADAPKIKVPVLLHLAGEDPYIPAADVDALAAALED 186 (236)
T ss_pred ecCCCCC----------------------------Ccc-------cccccccCcEEEEecccCCCCChhHHHHHHHHHHh
Confidence 1111100 000 00134678999999999999999999999999999
Q ss_pred cCCCeEEEEcCCCcccch
Q 015271 234 LGGDVKLVKLNGSPHIGH 251 (410)
Q Consensus 234 ~G~~V~l~~Fe~S~HV~H 251 (410)
.+.+++.+.|.+..|.=.
T Consensus 187 ~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 187 AGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred cCCCeeEEEeCCCccccc
Confidence 999999999999777644
No 62
>PRK07581 hypothetical protein; Validated
Probab=97.88 E-value=0.00077 Score=67.12 Aligned_cols=64 Identities=13% Similarity=0.064 Sum_probs=53.6
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCC-CcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG-SPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~-S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
..++|.|+|+++.|.++|.+..+.+++... +.+++.+++ ++|..++ ..|+++.+.|.+|+++..
T Consensus 273 ~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip----~a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 273 SITAKTFVMPISTDLYFPPEDCEAEAALIP----NAELRPIESIWGHLAGF-GQNPADIAFIDAALKELL 337 (339)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHHH
Confidence 467899999999999999999887766542 357888898 8999876 677889999999999865
No 63
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.83 E-value=0.00022 Score=65.68 Aligned_cols=191 Identities=20% Similarity=0.228 Sum_probs=98.7
Q ss_pred cccCCchhHHHHHHHHHH-hcCCeEEEEccccc-ccccccchhhHHHHHHHHHHHHh---ccCCCCEEEEEecccHHHHH
Q 015271 31 SWVSVHEHQLRSFVDLYS-SLGWNSLVSNSHFL-DAFYPERATSLAFVLINELVEEL---RIQTCPVVFVALSGGTKACM 105 (410)
Q Consensus 31 GW~gA~~rhL~KY~~lY~-~lG~n~Llv~s~~~-~l~~p~~~~~~A~~vL~eL~~~~---~~~~~pIv~H~FSgGg~a~l 105 (410)
||.....+....+...+. +.|+.++++..+.. ..-+| ..+.-+.++++++.+.. ...+..|++-+.|.||.-++
T Consensus 8 g~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p-~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~ 86 (211)
T PF07859_consen 8 GWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFP-AALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLAL 86 (211)
T ss_dssp TTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTT-HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHH
T ss_pred ccccCChHHHHHHHHHHHhhccEEEEEeecccccccccc-ccccccccceeeeccccccccccccceEEeecccccchhh
Confidence 344444344455666555 59999988887743 22223 23344556677776652 12233599999997774222
Q ss_pred HHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCc-h---hhHh--hhhccCcccccCcchhHHHHHHHHhhhhhc
Q 015271 106 HKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF-T---SDFC--ARFGLHPTIQKIPGLSKLVSWVAKGVTSGL 179 (410)
Q Consensus 106 ~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~-~---~~l~--~~~~~~~~l~k~~~~p~l~~wv~~~i~~~l 179 (410)
.......+. . ...++++|.=|+..++ . .... ....-.+.++ ...+.++.......
T Consensus 87 ~~~~~~~~~----~---------~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~- 147 (211)
T PF07859_consen 87 SLALRARDR----G---------LPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLP-----APKIDWFWKLYLPG- 147 (211)
T ss_dssp HHHHHHHHT----T---------TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSB-----HHHHHHHHHHHHST-
T ss_pred hhhhhhhhh----c---------ccchhhhhcccccccchhccccccccccccccccccc-----cccccccccccccc-
Confidence 222221110 0 1248888888887655 1 1111 0000001111 11122222111100
Q ss_pred ccccccccccchHH-HHHHhhc-CCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchh
Q 015271 180 DGLCLTRFEPQRAE-YWRALYN-SVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHY 252 (410)
Q Consensus 180 ~~lf~~~~~~~~~~-~~~~l~s-~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~ 252 (410)
..... +...+.. ....-.|.++++|+.|.++ ++.+++++++++.|.+|+++.+++.+|+=+|
T Consensus 148 ---------~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~~ 211 (211)
T PF07859_consen 148 ---------SDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFFM 211 (211)
T ss_dssp ---------GGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGGG
T ss_pred ---------ccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEeeC
Confidence 00000 0000110 1111237888999999886 5789999999999999999999999997543
No 64
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=97.80 E-value=0.0014 Score=67.81 Aligned_cols=234 Identities=19% Similarity=0.178 Sum_probs=126.1
Q ss_pred CCCcEEEEeccc-C-CchhHHHHHHHHHHhcCCeEEEEcccc---ccccccc----chhhHHHHHHHHHHHHhccCCCCE
Q 015271 22 SFRGIVVLFSWV-S-VHEHQLRSFVDLYSSLGWNSLVSNSHF---LDAFYPE----RATSLAFVLINELVEELRIQTCPV 92 (410)
Q Consensus 22 ~~kpLVIL~GW~-g-A~~rhL~KY~~lY~~lG~n~Llv~s~~---~~l~~p~----~~~~~A~~vL~eL~~~~~~~~~pI 92 (410)
+.+|+||++..+ | +++.++.-.+..=++.||.+++++.+- ..+-.|+ ....-...+++.+.+..+.+ |+
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a--~l 200 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQA--PL 200 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCC--ce
Confidence 456766666544 3 567788888888899999999998652 1122221 11112234566666666654 59
Q ss_pred EEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCch--h-hHhh---hhccCccc----ccCc
Q 015271 93 VFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFT--S-DFCA---RFGLHPTI----QKIP 162 (410)
Q Consensus 93 v~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~--~-~l~~---~~~~~~~l----~k~~ 162 (410)
+.-+||+||.. +...|... ..+ .+=+.|+++.++ =+.. + .+.. +.+....+ .++.
T Consensus 201 ~avG~S~Gg~i----L~nYLGE~---g~~-------~~l~~a~~v~~P-wd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~ 265 (409)
T KOG1838|consen 201 FAVGFSMGGNI----LTNYLGEE---GDN-------TPLIAAVAVCNP-WDLLAASRSIETPLYRRFYNRALTLNLKRIV 265 (409)
T ss_pred EEEEecchHHH----HHHHhhhc---cCC-------CCceeEEEEecc-chhhhhhhHHhcccchHHHHHHHHHhHHHHH
Confidence 99999998841 23333221 101 113355555555 4431 1 1110 00000000 0000
Q ss_pred chhH--H----HH--HHHH-hhhhhccccccc-ccc-cchHHHHHHhhc---CCCCCCcEEEEeeCCCCccCHHHHHHHH
Q 015271 163 GLSK--L----VS--WVAK-GVTSGLDGLCLT-RFE-PQRAEYWRALYN---SVDLGTPFLIICSDNDELAPQQVIYNFA 228 (410)
Q Consensus 163 ~~p~--l----~~--wv~~-~i~~~l~~lf~~-~~~-~~~~~~~~~l~s---~~~~~~P~LyIYS~~D~LVp~~dVe~~a 228 (410)
...+ + +. .+.+ .-.+-++..+.. .+. +.-.+||...-+ ....++|.|+|.+.+|+++|.+.+---
T Consensus 266 ~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~- 344 (409)
T KOG1838|consen 266 LRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPID- 344 (409)
T ss_pred hhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHH-
Confidence 0000 0 00 0000 001111111111 111 123556664211 356789999999999999999855332
Q ss_pred HHHHHcCCCeEEEEcCCCcccchhhc---CHHHHHHH-HHHHHHHHhhhhh
Q 015271 229 RHLLALGGDVKLVKLNGSPHIGHYEY---YPIQYRAA-ITGLLEKAASVYS 275 (410)
Q Consensus 229 ~~ar~~G~~V~l~~Fe~S~HV~H~r~---hPeeY~~a-V~~Fl~ka~~~~~ 275 (410)
..++. -.|-+..-.-.+|.|-+.. .+..|.+. +.+|+.++.....
T Consensus 345 -~~~~n-p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~~~~ 393 (409)
T KOG1838|consen 345 -DIKSN-PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIFQDE 393 (409)
T ss_pred -HHhcC-CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHhhhc
Confidence 22222 3688888888999999999 88888888 9999999876654
No 65
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.79 E-value=0.00058 Score=70.82 Aligned_cols=190 Identities=15% Similarity=0.135 Sum_probs=92.0
Q ss_pred CCCCCcEEEEecccCCchhHHH-HHHHHHHhcCCeEEEEccccccc-----ccccchhhHHHHHHHHHHHHhccCCCCEE
Q 015271 20 AASFRGIVVLFSWVSVHEHQLR-SFVDLYSSLGWNSLVSNSHFLDA-----FYPERATSLAFVLINELVEELRIQTCPVV 93 (410)
Q Consensus 20 ~~~~kpLVIL~GW~gA~~rhL~-KY~~lY~~lG~n~Llv~s~~~~l-----~~p~~~~~~A~~vL~eL~~~~~~~~~pIv 93 (410)
+..+.|+||++|.+++-...+. -|.+.+..+|+.+|+++.|.... +.++ ...+-..+|++|..........|.
T Consensus 186 ~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D-~~~l~~aVLd~L~~~p~VD~~RV~ 264 (411)
T PF06500_consen 186 GEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQD-SSRLHQAVLDYLASRPWVDHTRVG 264 (411)
T ss_dssp SSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S--CCHHHHHHHHHHHHSTTEEEEEEE
T ss_pred CCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcC-HHHHHHHHHHHHhcCCccChhheE
Confidence 4558899999999998765544 45566789999999999774432 1221 223445667776544211122399
Q ss_pred EEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCc-hhhHhhhhccCcccccCcchhHHHHHHH
Q 015271 94 FVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF-TSDFCARFGLHPTIQKIPGLSKLVSWVA 172 (410)
Q Consensus 94 ~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~-~~~l~~~~~~~~~l~k~~~~p~l~~wv~ 172 (410)
+.+||.||+.++.. . .++ .++|+|+|--.+++.- ..+... + ..+| .+...+.
T Consensus 265 ~~G~SfGGy~AvRl-A-~le---------------~~RlkavV~~Ga~vh~~ft~~~~---~-~~~P------~my~d~L 317 (411)
T PF06500_consen 265 AWGFSFGGYYAVRL-A-ALE---------------DPRLKAVVALGAPVHHFFTDPEW---Q-QRVP------DMYLDVL 317 (411)
T ss_dssp EEEETHHHHHHHHH-H-HHT---------------TTT-SEEEEES---SCGGH-HHH---H-TTS-------HHHHHHH
T ss_pred EEEeccchHHHHHH-H-Hhc---------------ccceeeEeeeCchHhhhhccHHH---H-hcCC------HHHHHHH
Confidence 99999888533221 1 111 1399999999998653 222221 0 0122 1111111
Q ss_pred HhhhhhcccccccccccchHHHHHH----------hhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEE
Q 015271 173 KGVTSGLDGLCLTRFEPQRAEYWRA----------LYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVK 242 (410)
Q Consensus 173 ~~i~~~l~~lf~~~~~~~~~~~~~~----------l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~ 242 (410)
...+..... ....+... +.+....++|.|.+++++|+++|.+|..-++.. +.+-++..
T Consensus 318 ---A~rlG~~~~-----~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~----s~~gk~~~ 385 (411)
T PF06500_consen 318 ---ASRLGMAAV-----SDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES----STDGKALR 385 (411)
T ss_dssp ---HHHCT-SCE------HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT----BTT-EEEE
T ss_pred ---HHHhCCccC-----CHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc----CCCCceee
Confidence 111100000 00001111 121244567999999999999999998777765 34444555
Q ss_pred cCCCc-cc
Q 015271 243 LNGSP-HI 249 (410)
Q Consensus 243 Fe~S~-HV 249 (410)
|...+ |-
T Consensus 386 ~~~~~~~~ 393 (411)
T PF06500_consen 386 IPSKPLHM 393 (411)
T ss_dssp E-SSSHHH
T ss_pred cCCCcccc
Confidence 55444 54
No 66
>PRK05855 short chain dehydrogenase; Validated
Probab=97.76 E-value=0.0009 Score=70.64 Aligned_cols=62 Identities=13% Similarity=0.177 Sum_probs=50.4
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
.++|.|+|++++|.++|.+..+.+++... ..+.+.++ +.|..|+ .+|+++.++|.+|+++..
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWVP----RLWRREIK-AGHWLPM-SHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccCC----cceEEEcc-CCCcchh-hChhHHHHHHHHHHHhcc
Confidence 67899999999999999998887765432 23556665 6899885 689999999999999754
No 67
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.69 E-value=0.0017 Score=65.63 Aligned_cols=63 Identities=24% Similarity=0.474 Sum_probs=54.8
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHh
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~ 271 (410)
.++|.|+++|+.|.++|.+..+++.++. -.++++..++..|+-|+ .-|+++.++|..||....
T Consensus 263 ~~~pvlii~G~~D~~~p~~~~~~~~~~~----pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 263 WKCPVLIIWGDKDQIVPLELAEELKKKL----PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARLR 325 (326)
T ss_pred cCCceEEEEcCcCCccCHHHHHHHHhhC----CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHhc
Confidence 3489999999999999999666665543 56889999999999999 999999999999998763
No 68
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.67 E-value=0.0018 Score=64.99 Aligned_cols=225 Identities=18% Similarity=0.180 Sum_probs=123.2
Q ss_pred CCCCcEEEEecccCCchhHHHHHHHH-HHhcCCeEEEEccc------ccccccccchhhHHHHHHHHHHHHhc-cCCCCE
Q 015271 21 ASFRGIVVLFSWVSVHEHQLRSFVDL-YSSLGWNSLVSNSH------FLDAFYPERATSLAFVLINELVEELR-IQTCPV 92 (410)
Q Consensus 21 ~~~kpLVIL~GW~gA~~rhL~KY~~l-Y~~lG~n~Llv~s~------~~~l~~p~~~~~~A~~vL~eL~~~~~-~~~~pI 92 (410)
...+|+++++|-.|+. ++-.....- =++++-.+..++-+ ......|+ .+|.++...+-.... ..-.++
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~---~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE---AMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred CCCCceEEecccccCC-CCHHHHHHHhcccccCceEEEecccCCCCccccccCHH---HHHHHHHHHHHHcccccccCCc
Confidence 3468899999999987 344444443 34566677666533 22233332 234344333222211 123468
Q ss_pred EEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh------hHhhhhc-cCcccccCcchh
Q 015271 93 VFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS------DFCARFG-LHPTIQKIPGLS 165 (410)
Q Consensus 93 v~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~------~l~~~~~-~~~~l~k~~~~p 165 (410)
++++.|+|| +.+.++.++. .+ + ...+.+|.|.+|+.... .+-.++. .....+..+...
T Consensus 126 ~l~GHsmGG-~~~~m~~t~~-----~p---~------~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rk 190 (315)
T KOG2382|consen 126 VLLGHSMGG-VKVAMAETLK-----KP---D------LIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRK 190 (315)
T ss_pred eecccCcch-HHHHHHHHHh-----cC---c------ccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHH
Confidence 999999887 2233223211 11 1 16689999999963211 1111111 111111111111
Q ss_pred H----H---------HHHHHHhhh-hhcccccccccccc----------hHHHHHHhhcCCCCCCcEEEEeeCCCCccCH
Q 015271 166 K----L---------VSWVAKGVT-SGLDGLCLTRFEPQ----------RAEYWRALYNSVDLGTPFLIICSDNDELAPQ 221 (410)
Q Consensus 166 ~----l---------~~wv~~~i~-~~l~~lf~~~~~~~----------~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~ 221 (410)
. + ..|+...+- ..-...|.+.+... ...||..+.. .+...|.|++.+..+..+|-
T Consensus 191 e~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~ 269 (315)
T KOG2382|consen 191 EALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPD 269 (315)
T ss_pred HHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcCh
Confidence 1 1 123322211 01111121111110 2223433333 56678999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 222 QVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 222 ~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
+...++.+.... |+.+.+++++|.=|+ ..|++..++|.+|++..
T Consensus 270 ~~~~~~~~~fp~----~e~~~ld~aGHwVh~-E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 270 EHYPRMEKIFPN----VEVHELDEAGHWVHL-EKPEEFIESISEFLEEP 313 (315)
T ss_pred hHHHHHHHhccc----hheeecccCCceeec-CCHHHHHHHHHHHhccc
Confidence 887777666433 889999999999886 67999999999998764
No 69
>PRK10115 protease 2; Provisional
Probab=97.64 E-value=0.0028 Score=70.16 Aligned_cols=210 Identities=13% Similarity=-0.009 Sum_probs=119.4
Q ss_pred CCCcEEE-EecccCCc-hhHHHHHHHHHHhcCCeEEEEccccccccccc-----------chhhHHHHHHHHHHHHhccC
Q 015271 22 SFRGIVV-LFSWVSVH-EHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPE-----------RATSLAFVLINELVEELRIQ 88 (410)
Q Consensus 22 ~~kpLVI-L~GW~gA~-~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~-----------~~~~~A~~vL~eL~~~~~~~ 88 (410)
+++|++| ++|--+.+ ..........+.++|+-+++++.+-..-+..+ ....-...+.++|++..-..
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d 522 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGS 522 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 3456554 45544433 22345556778999999999886632211111 12222234456666654333
Q ss_pred CCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHH
Q 015271 89 TCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLV 168 (410)
Q Consensus 89 ~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~ 168 (410)
+..|.+.+-|.||+.....+.+ .+ +..++.|...+..++...+.. ..++.. .
T Consensus 523 ~~rl~i~G~S~GG~l~~~~~~~----------~P-------dlf~A~v~~vp~~D~~~~~~~-----~~~p~~------~ 574 (686)
T PRK10115 523 PSLCYGMGGSAGGMLMGVAINQ----------RP-------ELFHGVIAQVPFVDVVTTMLD-----ESIPLT------T 574 (686)
T ss_pred hHHeEEEEECHHHHHHHHHHhc----------Ch-------hheeEEEecCCchhHhhhccc-----CCCCCC------h
Confidence 4459999999888522221111 11 366788888887776543321 112200 1
Q ss_pred HHHHHhhhhhcccccccccccchHHHHHH---hhcCCCCCCcE-EEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEc-
Q 015271 169 SWVAKGVTSGLDGLCLTRFEPQRAEYWRA---LYNSVDLGTPF-LIICSDNDELAPQQVIYNFARHLLALGGDVKLVKL- 243 (410)
Q Consensus 169 ~wv~~~i~~~l~~lf~~~~~~~~~~~~~~---l~s~~~~~~P~-LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~F- 243 (410)
.|.. -+.+.......+++.. +.+....+.|. |+++|.+|.-||+...++++++++++|.+++.+.+
T Consensus 575 ~~~~---------e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~ 645 (686)
T PRK10115 575 GEFE---------EWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLC 645 (686)
T ss_pred hHHH---------HhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEE
Confidence 1111 0111111222233321 11234457895 56699999999999999999999999999888888
Q ss_pred --CCCcccchhhcCHHHHHHHH---HHHHHHH
Q 015271 244 --NGSPHIGHYEYYPIQYRAAI---TGLLEKA 270 (410)
Q Consensus 244 --e~S~HV~H~r~hPeeY~~aV---~~Fl~ka 270 (410)
.+++|- ...+..+.++.+ ..|+-+.
T Consensus 646 ~~~~~GHg--~~~~r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 646 TDMDSGHG--GKSGRFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred ecCCCCCC--CCcCHHHHHHHHHHHHHHHHHH
Confidence 888887 445666655554 4455444
No 70
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.63 E-value=0.0067 Score=62.64 Aligned_cols=61 Identities=20% Similarity=0.221 Sum_probs=52.7
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
..++|.|+|+++.|.+++.+..+++++.. +.+++.++++.|.-|. .+|++..++|.+|+.+
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGHHVQE-DCGEELGGIISGILSK 383 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCCCcch-hCHHHHHHHHHHHhhC
Confidence 45789999999999999999888877752 4578889999999888 7999999999999863
No 71
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.61 E-value=0.003 Score=58.97 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=25.4
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHHHc
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLLAL 234 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar~~ 234 (410)
|.+++++++|.+||.+..+++++++++.
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 4568999999999999999999999877
No 72
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.58 E-value=0.0063 Score=60.42 Aligned_cols=58 Identities=24% Similarity=0.271 Sum_probs=50.4
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcC-CCeEEEEcCCCcccchhhcCHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALG-GDVKLVKLNGSPHIGHYEYYPIQYR 260 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G-~~V~l~~Fe~S~HV~H~r~hPeeY~ 260 (410)
..+.|.++.+|..|++||+...+++++++.++| .+|+.+......|.......-.+..
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~ 275 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDAL 275 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHH
Confidence 346899999999999999999999999999999 7999999999999987655544433
No 73
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.56 E-value=0.0042 Score=69.61 Aligned_cols=214 Identities=13% Similarity=0.057 Sum_probs=121.4
Q ss_pred HHHHHHHHHhcCCeEEEEcccc----ccc---ccccchhhHHHHHHHHHHHHhcc--------------CCCCEEEEEec
Q 015271 40 LRSFVDLYSSLGWNSLVSNSHF----LDA---FYPERATSLAFVLINELVEELRI--------------QTCPVVFVALS 98 (410)
Q Consensus 40 L~KY~~lY~~lG~n~Llv~s~~----~~l---~~p~~~~~~A~~vL~eL~~~~~~--------------~~~pIv~H~FS 98 (410)
...|.+.|..+||.+|+++.+- ... +.+. ...-+.++|+++...... ....|.+.+.|
T Consensus 268 ~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 268 SYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred chhHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 4568899999999999987652 122 2121 223345677777642110 12459999999
Q ss_pred ccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhh-ccCcc-cccCcchhHHHHHHHHh--
Q 015271 99 GGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARF-GLHPT-IQKIPGLSKLVSWVAKG-- 174 (410)
Q Consensus 99 gGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~-~~~~~-l~k~~~~p~l~~wv~~~-- 174 (410)
.||+.++..+.. . .+.++++|-+++.+++...+.... ...+. .+. .....+..++...
T Consensus 347 Y~G~~~~~aAa~----------~-------pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~g-ed~d~l~~~~~~r~~ 408 (767)
T PRK05371 347 YLGTLPNAVATT----------G-------VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQG-EDLDVLAELTYSRNL 408 (767)
T ss_pred HHHHHHHHHHhh----------C-------CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCC-cchhhHHHHhhhccc
Confidence 777533321111 1 137899999998877643221100 00000 000 0000000000000
Q ss_pred ----------hhhh-cccccc--cccccchHHHHHHh---hcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCe
Q 015271 175 ----------VTSG-LDGLCL--TRFEPQRAEYWRAL---YNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDV 238 (410)
Q Consensus 175 ----------i~~~-l~~lf~--~~~~~~~~~~~~~l---~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V 238 (410)
.... +..+.. .+-.....+||... ......++|.|+++|..|..++.+.+.++.+.+++.|.++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pk 488 (767)
T PRK05371 409 LAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPK 488 (767)
T ss_pred CcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCe
Confidence 0000 000000 00001234567642 1224577999999999999999999999999999989888
Q ss_pred EEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhh
Q 015271 239 KLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASV 273 (410)
Q Consensus 239 ~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~ 273 (410)
++... ...|+.-....+.+|.+.+.+|+...++-
T Consensus 489 kL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 489 KLFLH-QGGHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred EEEEe-CCCccCCCchhHHHHHHHHHHHHHhcccc
Confidence 88665 45687655556789999999999877553
No 74
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.47 E-value=0.013 Score=57.85 Aligned_cols=208 Identities=21% Similarity=0.146 Sum_probs=114.9
Q ss_pred CccccC-CCCCCCCcEEEEe-c--ccCCc-hhHHHHHHHHHHhcCCeEEEEcccccc-cccccchhhHHHHHHHHHHHHh
Q 015271 12 SSLYWG-RKAASFRGIVVLF-S--WVSVH-EHQLRSFVDLYSSLGWNSLVSNSHFLD-AFYPERATSLAFVLINELVEEL 85 (410)
Q Consensus 12 ~~~~w~-~~~~~~kpLVIL~-G--W~gA~-~rhL~KY~~lY~~lG~n~Llv~s~~~~-l~~p~~~~~~A~~vL~eL~~~~ 85 (410)
.+.|.+ .+.....|+||.+ | |.... ..|-.....+-...|+.|++++.+..- .-+|. ...-+..++.++.+..
T Consensus 66 ~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~-~~~d~~~a~~~l~~~~ 144 (312)
T COG0657 66 VRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPA-ALEDAYAAYRWLRANA 144 (312)
T ss_pred EEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCc-hHHHHHHHHHHHHhhh
Confidence 377887 3344445555544 3 44433 444466777778899999999988543 34553 2333555666666442
Q ss_pred ---ccCCCCEEEEEecccH-HHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccC
Q 015271 86 ---RIQTCPVVFVALSGGT-KACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKI 161 (410)
Q Consensus 86 ---~~~~~pIv~H~FSgGg-~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~ 161 (410)
...+..|.+-+.|.|| .+... ... + .. . -.....++|+-|+-.+.+. ..... . .....
T Consensus 145 ~~~g~dp~~i~v~GdSAGG~La~~~-a~~-~-~~------~-----~~~~p~~~~li~P~~d~~~-~~~~~-~--~~~~~ 206 (312)
T COG0657 145 AELGIDPSRIAVAGDSAGGHLALAL-ALA-A-RD------R-----GLPLPAAQVLISPLLDLTS-SAASL-P--GYGEA 206 (312)
T ss_pred HhhCCCccceEEEecCcccHHHHHH-HHH-H-Hh------c-----CCCCceEEEEEecccCCcc-cccch-h--hcCCc
Confidence 3335569999999665 32221 111 1 11 0 1125678888887666654 11100 0 00111
Q ss_pred cchhH--HHHHHHHhhhhhcccccccccccchHHHHHHhhcC--CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCC
Q 015271 162 PGLSK--LVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNS--VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGD 237 (410)
Q Consensus 162 ~~~p~--l~~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~--~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~ 237 (410)
..... ...|+............ ..+...+... .. -.|.+++.++.|.+.+ +.+.+++++++.|..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~ 275 (312)
T COG0657 207 DLLDAAAILAWFADLYLGAAPDRE--------DPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVP 275 (312)
T ss_pred cccCHHHHHHHHHHHhCcCccccC--------CCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCe
Confidence 11111 12243322111110000 0000001100 11 2489999999999999 899999999999999
Q ss_pred eEEEEcCCCccc
Q 015271 238 VKLVKLNGSPHI 249 (410)
Q Consensus 238 V~l~~Fe~S~HV 249 (410)
++...|++..|.
T Consensus 276 ~~~~~~~g~~H~ 287 (312)
T COG0657 276 VELRVYPGMIHG 287 (312)
T ss_pred EEEEEeCCccee
Confidence 999999999994
No 75
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.42 E-value=0.0024 Score=68.64 Aligned_cols=52 Identities=33% Similarity=0.374 Sum_probs=42.3
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI 257 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPe 257 (410)
...++|.|+|.++.|.++|++.++...+.. + ..+...+++++|+.|+-.-|.
T Consensus 412 ~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i---~-~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 412 SKVKVPVYIIATREDHIAPWQSAYRGAALL---G-GPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred hhCCCCEEEEeeCCCCcCCHHHHHHHHHHC---C-CCEEEEECCCCCchHhhCCCC
Confidence 456899999999999999999998876553 4 345678999999999876554
No 76
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.39 E-value=0.018 Score=57.50 Aligned_cols=66 Identities=18% Similarity=0.173 Sum_probs=54.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchh---hcCHHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHY---EYYPIQYRAAITGLLEK 269 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~---r~hPeeY~~aV~~Fl~k 269 (410)
.....|.|++|+++|.+++.+..+++++.|.. .|.+++.++|.-|.-|. ..+-+.+.+-|.++|++
T Consensus 243 ~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S--~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 243 NEVTVPFLILHGTDDKVTDPKVSKELYEKASS--SDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred ccccccEEEEecCCCcccCcHHHHHHHHhccC--CCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 46778999999999999999999999999865 48899999999999885 33455566666666653
No 77
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.29 E-value=0.0033 Score=57.09 Aligned_cols=58 Identities=26% Similarity=0.456 Sum_probs=47.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAIT 264 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~ 264 (410)
....+|.|+++++.|.++|++.++.+++.. -..+.+.+++++|.. +-.+|++..+.|.
T Consensus 172 ~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~GH~~-~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 172 SNIKVPTLIIWGEDDPLVPPESSEQLAKLI----PNSQLVLIEGSGHFA-FLEGPDEFNEIII 229 (230)
T ss_dssp TTTTSEEEEEEETTCSSSHHHHHHHHHHHS----TTEEEEEETTCCSTH-HHHSHHHHHHHHH
T ss_pred cccCCCeEEEEeCCCCCCCHHHHHHHHHhc----CCCEEEECCCCChHH-HhcCHHhhhhhhc
Confidence 457899999999999999999999966553 237899999999997 4567777777664
No 78
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.07 E-value=0.079 Score=47.00 Aligned_cols=62 Identities=31% Similarity=0.531 Sum_probs=45.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 267 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl 267 (410)
....+|.|+|+++.|.+.|....+...+..+ + ..+.+.++++.|.-|+. +|+.+.+.|.+|+
T Consensus 218 ~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~--~-~~~~~~~~~~gH~~~~~-~p~~~~~~i~~~~ 279 (282)
T COG0596 218 ARITVPTLIIHGEDDPVVPAELARRLAAALP--N-DARLVVIPGAGHFPHLE-APEAFAAALLAFL 279 (282)
T ss_pred ccCCCCeEEEecCCCCcCCHHHHHHHHhhCC--C-CceEEEeCCCCCcchhh-cHHHHHHHHHHHH
Confidence 3456899999999998888777444443322 1 57889999999997765 4558888877744
No 79
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.02 E-value=0.034 Score=51.57 Aligned_cols=170 Identities=21% Similarity=0.218 Sum_probs=105.0
Q ss_pred CcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHhccCCCCEEEEEecccHHH
Q 015271 24 RGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEELRIQTCPVVFVALSGGTKA 103 (410)
Q Consensus 24 kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H~FSgGg~a 103 (410)
..++|+.|+.++.+.| |-..+.+.-+++-.+..+... .| ...+++..|.++....++|++|-+=|-|..+
T Consensus 3 ~~~lIVpG~~~Sg~~H---Wq~~we~~l~~a~rveq~~w~--~P-----~~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~ 72 (181)
T COG3545 3 TDVLIVPGYGGSGPNH---WQSRWESALPNARRVEQDDWE--AP-----VLDDWIARLEKEVNAAEGPVVLVAHSLGCAT 72 (181)
T ss_pred ceEEEecCCCCCChhH---HHHHHHhhCccchhcccCCCC--CC-----CHHHHHHHHHHHHhccCCCeEEEEecccHHH
Confidence 5688999999999766 666777777775444433221 11 2246677777776666777888888977632
Q ss_pred HHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHHHHHHHhhhhhccccc
Q 015271 104 CMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVSWVAKGVTSGLDGLC 183 (410)
Q Consensus 104 ~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~~wv~~~i~~~l~~lf 183 (410)
. .+++... ..+|.|.++=++|-....... .+.++
T Consensus 73 v-~h~~~~~----------------~~~V~GalLVAppd~~~~~~~--------------~~~~~--------------- 106 (181)
T COG3545 73 V-AHWAEHI----------------QRQVAGALLVAPPDVSRPEIR--------------PKHLM--------------- 106 (181)
T ss_pred H-HHHHHhh----------------hhccceEEEecCCCccccccc--------------hhhcc---------------
Confidence 1 2223211 128889998888643332110 00000
Q ss_pred ccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcC------HH
Q 015271 184 LTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY------PI 257 (410)
Q Consensus 184 ~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~h------Pe 257 (410)
.|.. +...+..-|.+.+.|++|++++++..+++++.+-.. +-+.+|.||+..+ |+
T Consensus 107 --tf~~---------~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~--------lv~~g~~GHiN~~sG~g~wpe 167 (181)
T COG3545 107 --TFDP---------IPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSA--------LVDVGEGGHINAESGFGPWPE 167 (181)
T ss_pred --ccCC---------CccccCCCceeEEEecCCCCCCHHHHHHHHHhccHh--------heecccccccchhhcCCCcHH
Confidence 0000 111345669999999999999999999999997443 3466788888775 66
Q ss_pred HHHHHHHHHHHH
Q 015271 258 QYRAAITGLLEK 269 (410)
Q Consensus 258 eY~~aV~~Fl~k 269 (410)
-| ..+.+|+.+
T Consensus 168 g~-~~l~~~~s~ 178 (181)
T COG3545 168 GY-ALLAQLLSR 178 (181)
T ss_pred HH-HHHHHHhhh
Confidence 66 344444433
No 80
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.94 E-value=0.25 Score=48.61 Aligned_cols=41 Identities=12% Similarity=0.165 Sum_probs=31.1
Q ss_pred CCcEEEEeeC-CCCccCHHHHHHHHHHHHHcCCCeEEEEcCC
Q 015271 205 GTPFLIICSD-NDELAPQQVIYNFARHLLALGGDVKLVKLNG 245 (410)
Q Consensus 205 ~~P~LyIYS~-~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~ 245 (410)
..+.|.+-.. .+.=-+.....+++++++++|.+|+...|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~ 242 (266)
T TIGR03101 201 NCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPG 242 (266)
T ss_pred CCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCC
Confidence 4456666553 3444566778999999999999999999975
No 81
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.89 E-value=0.0016 Score=61.58 Aligned_cols=48 Identities=23% Similarity=0.396 Sum_probs=32.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHH-HHHHcCCC--eEEEEcCCCccc
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFAR-HLLALGGD--VKLVKLNGSPHI 249 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~-~ar~~G~~--V~l~~Fe~S~HV 249 (410)
...++|.|+|.|++|.+.|....-+.+. ++++.|.+ ++...+++++|.
T Consensus 112 E~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 112 EKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp GG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S-
T ss_pred HHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCce
Confidence 3467899999999999999888776655 46666755 888899988886
No 82
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.83 E-value=0.015 Score=62.64 Aligned_cols=52 Identities=25% Similarity=0.316 Sum_probs=42.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI 257 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPe 257 (410)
..+++|.+.+.+++|.|+||+.+....+. .|.+++.+.. .|+|++-.-.-|.
T Consensus 438 ~~I~~Pvl~va~~~DHIvPw~s~~~~~~l---~gs~~~fvl~-~gGHIggivnpP~ 489 (560)
T TIGR01839 438 KKVKCDSFSVAGTNDHITPWDAVYRSALL---LGGKRRFVLS-NSGHIQSILNPPG 489 (560)
T ss_pred hcCCCCeEEEecCcCCcCCHHHHHHHHHH---cCCCeEEEec-CCCccccccCCCC
Confidence 56789999999999999999999998775 4668765555 8899987765543
No 83
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.80 E-value=0.067 Score=54.02 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=43.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
...++|.|+-.|-.|++||...+-..++.+. .++++..++...|-. .++..++...+|+++
T Consensus 259 ~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~---~~K~l~vyp~~~He~----~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 259 RRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP---GPKELVVYPEYGHEY----GPEFQEDKQLNFLKE 319 (320)
T ss_dssp GG--SEEEEEEETT-SSS-HHHHHHHHCC-----SSEEEEEETT--SST----THHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEecCCCCCCchhHHHHHhccC---CCeeEEeccCcCCCc----hhhHHHHHHHHHHhc
Confidence 4568999999999999999999999999874 568999999888852 333447777788765
No 84
>PRK07868 acyl-CoA synthetase; Validated
Probab=96.76 E-value=0.051 Score=62.60 Aligned_cols=65 Identities=14% Similarity=0.190 Sum_probs=52.9
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEE-EEcCCCcccchhhc--CHHHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKL-VKLNGSPHIGHYEY--YPIQYRAAITGLLEKA 270 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l-~~Fe~S~HV~H~r~--hPeeY~~aV~~Fl~ka 270 (410)
...++|.|+|+++.|.++|.+.++.+.+.. + ..+. +.+++..|.+++-. -|++=|-.|.++|++-
T Consensus 294 ~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i---~-~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 294 ADITCPVLAFVGEVDDIGQPASVRGIRRAA---P-NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred hhCCCCEEEEEeCCCCCCCHHHHHHHHHhC---C-CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 456789999999999999999999987653 2 2334 67789999988865 4888999999999963
No 85
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=96.63 E-value=0.0063 Score=62.93 Aligned_cols=66 Identities=17% Similarity=0.299 Sum_probs=58.8
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCC-CcccchhhcCHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG-SPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~-S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
..++|.|+|+++.|.++|.+..+++++.....|.+++.+.+++ ..|..++ .+|+++.++|.+|+++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 4678999999999999999999999888876666788999985 8999988 6999999999999975
No 86
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.49 E-value=0.099 Score=50.13 Aligned_cols=169 Identities=15% Similarity=0.154 Sum_probs=88.2
Q ss_pred CCCcEEEEecccCCchhHHHHHH---HHHHhcCCeEEEEcccc----ccc---cccc-c----hhhHHHHHHHHHHHHhc
Q 015271 22 SFRGIVVLFSWVSVHEHQLRSFV---DLYSSLGWNSLVSNSHF----LDA---FYPE-R----ATSLAFVLINELVEELR 86 (410)
Q Consensus 22 ~~kpLVIL~GW~gA~~rhL~KY~---~lY~~lG~n~Llv~s~~----~~l---~~p~-~----~~~~A~~vL~eL~~~~~ 86 (410)
++.||||+++..+.....+.... ++=.+.||-++..+... ... +... . .......+++++.....
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 36799999998888776655543 34446777666555321 111 1111 1 12233456666666655
Q ss_pred cCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhH
Q 015271 87 IQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSK 166 (410)
Q Consensus 87 ~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~ 166 (410)
..+..|.+-+||+||..... + .. . -++.|..+. .+.|..++++-... ..+.. ...+... .+
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~--l--a~---~---~pd~faa~a-~~sG~~~~~a~~~~-~a~~~---m~~g~~~---~p- 154 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANV--L--AC---A---YPDLFAAVA-VVSGVPYGCAASGA-SALSA---MRSGPRP---AP- 154 (220)
T ss_pred cCCCceeeEEECHHHHHHHH--H--HH---h---CCccceEEE-eecccccccccCcc-cHHHH---hhCCCCC---Ch-
Confidence 44556999999988742111 1 11 1 233343332 34455455442211 11111 0000000 01
Q ss_pred HHHHHHHhhhhhcccccccccccchHHHHHHhh-cCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHc
Q 015271 167 LVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALY-NSVDLGTPFLIICSDNDELAPQQVIYNFARHLLAL 234 (410)
Q Consensus 167 l~~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~-s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~ 234 (410)
...+.... ...-...|++++|+++|..|....-++.++++...
T Consensus 155 -------------------------~~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 155 -------------------------AAAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred -------------------------HHHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 00011000 00112469999999999999999999999998765
No 87
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.46 E-value=0.11 Score=49.09 Aligned_cols=169 Identities=14% Similarity=0.146 Sum_probs=103.2
Q ss_pred CCCCcEEEEecc----cC-CchhHHHHHHHHHHhcCCeEEEEcccc-------cccccccchhhHHHHHHHHHHHHhccC
Q 015271 21 ASFRGIVVLFSW----VS-VHEHQLRSFVDLYSSLGWNSLVSNSHF-------LDAFYPERATSLAFVLINELVEELRIQ 88 (410)
Q Consensus 21 ~~~kpLVIL~GW----~g-A~~rhL~KY~~lY~~lG~n~Llv~s~~-------~~l~~p~~~~~~A~~vL~eL~~~~~~~ 88 (410)
+..+|++|+|.= .| -+.+-+..-...++++|+.+|.++-+- .+-+.. .+.-|..+|+++....+..
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiG--E~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIG--ELEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcc--hHHHHHHHHHHHHhhCCCc
Confidence 346889888741 11 234567888889999999999988642 222222 2334556777777666554
Q ss_pred CCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHH
Q 015271 89 TCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLV 168 (410)
Q Consensus 89 ~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~ 168 (410)
+ ..-+-+||-|++..|. +++.. + .+-+.|-=++|..
T Consensus 103 ~-~~~l~GfSFGa~Ia~~----la~r~-~-------------e~~~~is~~p~~~------------------------- 138 (210)
T COG2945 103 A-SCWLAGFSFGAYIAMQ----LAMRR-P-------------EILVFISILPPIN------------------------- 138 (210)
T ss_pred h-hhhhcccchHHHHHHH----HHHhc-c-------------cccceeeccCCCC-------------------------
Confidence 3 1368899988863333 22221 1 1111111111111
Q ss_pred HHHHHhhhhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcc
Q 015271 169 SWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPH 248 (410)
Q Consensus 169 ~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~H 248 (410)
.-+++. ..+.++|.|+|+++.|+++++..+.+.++ +.+++.+.-.++.|
T Consensus 139 ----------------------~~dfs~----l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~-----~~~~~~i~i~~a~H 187 (210)
T COG2945 139 ----------------------AYDFSF----LAPCPSPGLVIQGDADDVVDLVAVLKWQE-----SIKITVITIPGADH 187 (210)
T ss_pred ----------------------chhhhh----ccCCCCCceeEecChhhhhcHHHHHHhhc-----CCCCceEEecCCCc
Confidence 000000 13457899999999998888877766554 36788999999999
Q ss_pred cchhhcCHHHHHHHHHHHHH
Q 015271 249 IGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 249 V~H~r~hPeeY~~aV~~Fl~ 268 (410)
-=|.+.+ +-.+.|.+||.
T Consensus 188 FF~gKl~--~l~~~i~~~l~ 205 (210)
T COG2945 188 FFHGKLI--ELRDTIADFLE 205 (210)
T ss_pred eecccHH--HHHHHHHHHhh
Confidence 8776654 55677888875
No 88
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.04 E-value=0.13 Score=49.51 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=38.7
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCC--eEEEEcCCCcccc
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGD--VKLVKLNGSPHIG 250 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~--V~l~~Fe~S~HV~ 250 (410)
..++|.|+|+++.|.++|.++|.+.-+..++. -. -+.+.|++-.|-=
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-~~~~~~v~~f~g~~HGf 210 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKEN-PAVGSQVKTFSGVGHGF 210 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcC-cccceeEEEcCCccchh
Confidence 45689999999999999999999988887765 22 3588999988853
No 89
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=95.84 E-value=0.21 Score=50.12 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=55.3
Q ss_pred CCcEEEEecccCCc---hhHHHHHHHHHHhcCCeEEEEc--ccccccccccc--hhhHHHHHHHHHHHHhcc--CCCCEE
Q 015271 23 FRGIVVLFSWVSVH---EHQLRSFVDLYSSLGWNSLVSN--SHFLDAFYPER--ATSLAFVLINELVEELRI--QTCPVV 93 (410)
Q Consensus 23 ~kpLVIL~GW~gA~---~rhL~KY~~lY~~lG~n~Llv~--s~~~~l~~p~~--~~~~A~~vL~eL~~~~~~--~~~pIv 93 (410)
.+-.+|..|.++.. -.++..-++.-.+.+|.++-+. +.+..++...- +..-....+++|...... ....||
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIV 111 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIV 111 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EE
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEE
Confidence 45578888888753 3346666666678899995554 55666665532 222223455555555211 123599
Q ss_pred EEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCc
Q 015271 94 FVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF 144 (410)
Q Consensus 94 ~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~ 144 (410)
+.+=|-|.--+|+ .|... +. ..-+++|+|.|+-.+.+|-
T Consensus 112 LmGHSTGcQdvl~----Yl~~~-----~~---~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 112 LMGHSTGCQDVLH----YLSSP-----NP---SPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp EEEECCHHHHHHH----HHHH------TT------CCCEEEEEEEEE---T
T ss_pred EEecCCCcHHHHH----HHhcc-----Cc---cccccceEEEEEeCCCCCh
Confidence 9999999843333 22221 10 0125699999999997765
No 90
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=95.57 E-value=0.46 Score=48.58 Aligned_cols=60 Identities=18% Similarity=0.334 Sum_probs=49.1
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
.+....+++.++|.+||...+.++.+.|. |..|+. -+.+||+-|-.|.+-|+++|.+.++
T Consensus 288 dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP--GsEvR~---l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 288 DPSAIIFVAAKNDAYVPRHGVLSLQEIWP--GSEVRY---LPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCCcEEEEEecCceEechhhcchHHHhCC--CCeEEE---ecCCcEEEeeechHHHHHHHHHHhh
Confidence 34466889999999999999998888763 544443 4669999999999999999998775
No 91
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=95.38 E-value=0.29 Score=44.91 Aligned_cols=153 Identities=20% Similarity=0.265 Sum_probs=78.6
Q ss_pred EEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHhccCCCCEEEEEecccHHHHH
Q 015271 26 IVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEELRIQTCPVVFVALSGGTKACM 105 (410)
Q Consensus 26 LVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H~FSgGg~a~l 105 (410)
++|+.||.++.+.|=..+.+- ++. +...|.. ...-.|+ ..+++..|.+.....+.+++|-+=|.|..+.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~--~l~-~~~~V~~--~~~~~P~-----~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l 70 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLER--QLE-NSVRVEQ--PDWDNPD-----LDEWVQALDQAIDAIDEPTILVAHSLGCLTAL 70 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHH--HHT-TSEEEEE--C--TS-------HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHH--hCC-CCeEEec--cccCCCC-----HHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHH
Confidence 689999999999885444443 222 2233322 2223331 23455555555443445688888898874322
Q ss_pred HHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHHHHHHHhhhhhccccccc
Q 015271 106 HKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVSWVAKGVTSGLDGLCLT 185 (410)
Q Consensus 106 ~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~~wv~~~i~~~l~~lf~~ 185 (410)
. .+. .. ...+|+|.++=|+|..... .. ..+.+.
T Consensus 71 ~-~l~--~~-------------~~~~v~g~lLVAp~~~~~~-~~----~~~~~~-------------------------- 103 (171)
T PF06821_consen 71 R-WLA--EQ-------------SQKKVAGALLVAPFDPDDP-EP----FPPELD-------------------------- 103 (171)
T ss_dssp H-HHH--HT-------------CCSSEEEEEEES--SCGCH-HC----CTCGGC--------------------------
T ss_pred H-HHh--hc-------------ccccccEEEEEcCCCcccc-cc----hhhhcc--------------------------
Confidence 2 221 11 1239999999999754211 00 000000
Q ss_pred ccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCccc
Q 015271 186 RFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHI 249 (410)
Q Consensus 186 ~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV 249 (410)
.|..... ...+.|.+.|.|++|+.+|++..+++++++. .+...+.+.+|.
T Consensus 104 ~f~~~p~---------~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~-----a~~~~~~~~GHf 153 (171)
T PF06821_consen 104 GFTPLPR---------DPLPFPSIVIASDNDPYVPFERAQRLAQRLG-----AELIILGGGGHF 153 (171)
T ss_dssp CCTTSHC---------CHHHCCEEEEEETTBSSS-HHHHHHHHHHHT------EEEEETS-TTS
T ss_pred ccccCcc---------cccCCCeEEEEcCCCCccCHHHHHHHHHHcC-----CCeEECCCCCCc
Confidence 0000000 1123466999999999999999999999873 335666555554
No 92
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.22 E-value=0.14 Score=57.51 Aligned_cols=69 Identities=17% Similarity=0.106 Sum_probs=58.1
Q ss_pred CcE-EEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhhh
Q 015271 206 TPF-LIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVY 274 (410)
Q Consensus 206 ~P~-LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~ 274 (410)
.|. |+|||+.|+.|+.+...+++++++.+|.+.++..|+|+.|-=-.+..-..+...+..|+..|....
T Consensus 682 ~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 682 TPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCcc
Confidence 455 999999999999999999999999999999999999999975555554666677888888766544
No 93
>PLN02872 triacylglycerol lipase
Probab=94.65 E-value=0.13 Score=53.53 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=52.6
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchh--hcCHHHHHHHHHHHHHHHh
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHY--EYYPIQYRAAITGLLEKAA 271 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~--r~hPeeY~~aV~~Fl~ka~ 271 (410)
++|.+++||++|.+++.++++++++++.. .++.+.+++..|..++ ...|++-.+.|.+|+++..
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 67999999999999999999999887532 3577889999998554 5668888899999998643
No 94
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.51 E-value=0.31 Score=47.86 Aligned_cols=81 Identities=20% Similarity=0.228 Sum_probs=47.5
Q ss_pred CCCcEEEEecccCCc-hhHHHHHHHHHHh-cCCeEEEEccccc-ccccccc--hh----hHHHHHHHHHHHHhccCCCCE
Q 015271 22 SFRGIVVLFSWVSVH-EHQLRSFVDLYSS-LGWNSLVSNSHFL-DAFYPER--AT----SLAFVLINELVEELRIQTCPV 92 (410)
Q Consensus 22 ~~kpLVIL~GW~gA~-~rhL~KY~~lY~~-lG~n~Llv~s~~~-~l~~p~~--~~----~~A~~vL~eL~~~~~~~~~pI 92 (410)
+.+++|+|+||.+.. .......++.|.. .++++++++-+.. ...++.. .. .....+|+.|.+........|
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 356799999999977 3344556666654 5799999874322 1111211 11 112234555554422223459
Q ss_pred EEEEecccHH
Q 015271 93 VFVALSGGTK 102 (410)
Q Consensus 93 v~H~FSgGg~ 102 (410)
.+-++|+||.
T Consensus 115 ~lIGhSlGa~ 124 (275)
T cd00707 115 HLIGHSLGAH 124 (275)
T ss_pred EEEEecHHHH
Confidence 9999998884
No 95
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=94.04 E-value=0.12 Score=48.63 Aligned_cols=64 Identities=23% Similarity=0.355 Sum_probs=55.7
Q ss_pred CcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHH--HHHHHHHHHHHHHh
Q 015271 206 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI--QYRAAITGLLEKAA 271 (410)
Q Consensus 206 ~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPe--eY~~aV~~Fl~ka~ 271 (410)
.|.|++++.+|.+||..+.+++...++.. ..+...+++..|..-+..++. +|+..+.+|+.+..
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999999998764 667888888888888767775 99999999998753
No 96
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=93.90 E-value=7.3 Score=39.58 Aligned_cols=64 Identities=23% Similarity=0.365 Sum_probs=44.3
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhc--CHHHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEY--YPIQYRAAITGLLEKA 270 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~--hPeeY~~aV~~Fl~ka 270 (410)
.....|.++|++++|.+.+.....+.+.+.-- ..-+.+..+ |++|+-+ +|++-.+++.+|+++-
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp--~l~~~vv~~---~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVP--RLTERVVIE---GIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhc--cccceEEec---CCcccccccCHHHHHHHHHHHHHhh
Confidence 45678999999999999999943333333211 111344554 5566654 6999999999999875
No 97
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=93.69 E-value=1.7 Score=40.84 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=28.6
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcc
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPH 248 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~H 248 (410)
....|.|-++|++|.+++.+..+.+++..... . .+...+.+|
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~-~v~~h~gGH 200 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPD---A-RVIEHDGGH 200 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHH---E-EEEEESSSS
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---c-EEEEECCCC
Confidence 35689999999999999999999999987664 3 334444444
No 98
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=93.51 E-value=5.2 Score=41.95 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=54.8
Q ss_pred CCCC-CcEEEEeeCCCCccCHHHHHHHHHHHHHcC-CCeEEEEcCCCcccchhhc--CHHHHHHHHHHHHHH
Q 015271 202 VDLG-TPFLIICSDNDELAPQQVIYNFARHLLALG-GDVKLVKLNGSPHIGHYEY--YPIQYRAAITGLLEK 269 (410)
Q Consensus 202 ~~~~-~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G-~~V~l~~Fe~S~HV~H~r~--hPeeY~~aV~~Fl~k 269 (410)
..++ +|.|.+.+++|+++|+...+...+.....+ .+.+.....+.+|+|-+-. -+++=|-.|.+||.+
T Consensus 334 ~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 334 GAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 3456 999999999999999999999988765554 3456777789999998865 477788888888864
No 99
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.46 E-value=9.1 Score=39.38 Aligned_cols=63 Identities=17% Similarity=0.248 Sum_probs=45.3
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
..+|.++|||+.|=+=.. .-.+....+ .-..|+.+..++++|- -|-++|+.+-++|.+++++.
T Consensus 302 ~~~pv~fiyG~~dWmD~~-~g~~~~~~~--~~~~~~~~~v~~aGHh-vylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 302 KDVPVTFIYGDRDWMDKN-AGLEVTKSL--MKEYVEIIIVPGAGHH-VYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cCCCEEEEecCcccccch-hHHHHHHHh--hcccceEEEecCCCce-eecCCHHHHHHHHHHHHhcc
Confidence 358999999998865433 323333322 2234888889999985 56789999999999998763
No 100
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=93.27 E-value=1.9 Score=44.19 Aligned_cols=151 Identities=18% Similarity=0.084 Sum_probs=81.2
Q ss_pred CCcEEEEecccCCchhH-H-----HHHHHHHHhcCCeEEEEcccc--cccccccc-hh-hHHHHHHHHHHHHhc-cCCCC
Q 015271 23 FRGIVVLFSWVSVHEHQ-L-----RSFVDLYSSLGWNSLVSNSHF--LDAFYPER-AT-SLAFVLINELVEELR-IQTCP 91 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rh-L-----~KY~~lY~~lG~n~Llv~s~~--~~l~~p~~-~~-~~A~~vL~eL~~~~~-~~~~p 91 (410)
.|.+++..|=.++=+.+ + ....+++..++-|++++..+- ..-+.++. ++ ..+...+++|.++.+ ..+.-
T Consensus 137 ~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~ 216 (365)
T PF05677_consen 137 QRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKN 216 (365)
T ss_pred CcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChhe
Confidence 56666666644444442 2 356677888999999998762 23333322 22 233345566665432 12345
Q ss_pred EEEEEecc-cHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCce-EEEEeCCCCCchhhHhhhhccCcccccCcchhHHHH
Q 015271 92 VVFVALSG-GTKACMHKAFQIIQATCEGQLNVDESRLIRSCVA-GQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVS 169 (410)
Q Consensus 92 Iv~H~FSg-Gg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~Ik-G~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~~ 169 (410)
|++++-|. |+.++. .+... .++ -.+.|+ .+|-|-+|..+.... .++ ...+..
T Consensus 217 Ii~yG~SLGG~Vqa~-----AL~~~---~~~------~~dgi~~~~ikDRsfssl~~va-s~~-----------~~~~~~ 270 (365)
T PF05677_consen 217 IILYGHSLGGGVQAE-----ALKKE---VLK------GSDGIRWFLIKDRSFSSLAAVA-SQF-----------FGPIGK 270 (365)
T ss_pred EEEeeccccHHHHHH-----HHHhc---ccc------cCCCeeEEEEecCCcchHHHHH-HHH-----------HHHHHH
Confidence 99999994 554322 12110 111 112455 788899987775522 211 122345
Q ss_pred HHHHhhhhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCC
Q 015271 170 WVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDN 215 (410)
Q Consensus 170 wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~ 215 (410)
|+++-+ .|+......|. ...||-+++|+.+
T Consensus 271 ~l~~l~----------gWnidS~K~s~------~l~cpeIii~~~d 300 (365)
T PF05677_consen 271 LLIKLL----------GWNIDSAKNSE------KLQCPEIIIYGVD 300 (365)
T ss_pred HHHHHh----------ccCCCchhhhc------cCCCCeEEEeccc
Confidence 554322 22333444443 3569999999984
No 101
>COG4099 Predicted peptidase [General function prediction only]
Probab=92.85 E-value=0.78 Score=46.21 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=33.8
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcC
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLN 244 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe 244 (410)
..|.-++||.+|.++|.+...-.+++.++.+.+|.-.-|.
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 5699999999999999999999999998887766554444
No 102
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=92.40 E-value=0.14 Score=48.87 Aligned_cols=64 Identities=17% Similarity=0.246 Sum_probs=51.6
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
...+||.|+++++.|++|+-..|. |+...+. --+.+.++...|-=|+| +++++-+.|.+|+++.
T Consensus 213 p~vkcPtli~hG~kDp~~~~~hv~-fi~~~~~---~a~~~~~peGkHn~hLr-ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 213 PQVKCPTLIMHGGKDPFCGDPHVC-FIPVLKS---LAKVEIHPEGKHNFHLR-YAKEFNKLVLDFLKST 276 (277)
T ss_pred ccccCCeeEeeCCcCCCCCCCCcc-chhhhcc---cceEEEccCCCcceeee-chHHHHHHHHHHHhcc
Confidence 568899999999999999988764 3444332 24577889999988876 7999999999999874
No 103
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=92.12 E-value=0.51 Score=48.89 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=16.6
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHL 231 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~a 231 (410)
+.|.|++.|..|.+.|. |++-++.+
T Consensus 306 PRPll~~nG~~Dklf~i--V~~AY~~~ 330 (390)
T PF12715_consen 306 PRPLLFENGGKDKLFPI--VRRAYAIM 330 (390)
T ss_dssp TS-EEESS-B-HHHHHH--HHHHHHHT
T ss_pred CCcchhhcCCcccccHH--HHHHHHhc
Confidence 46999999999998755 66666653
No 104
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=91.70 E-value=11 Score=35.07 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=41.2
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 267 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl 267 (410)
..+.+.+.+.++.|++++|+...+..+.+ .....+|+. |--.+-++|...|.+|+
T Consensus 132 ~~~~~~lvll~~~DEvLd~~~a~~~~~~~-------~~~i~~ggd---H~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 132 TNPERYLVLLQTGDEVLDYREAVAKYRGC-------AQIIEEGGD---HSFQDFEEYLPQIIAFL 186 (187)
T ss_pred CCCccEEEEEecCCcccCHHHHHHHhcCc-------eEEEEeCCC---CCCccHHHHHHHHHHhh
Confidence 34569999999999999997765555432 234556774 55788999999999986
No 105
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=90.58 E-value=1.7 Score=46.75 Aligned_cols=111 Identities=6% Similarity=0.005 Sum_probs=61.5
Q ss_pred cCCCCCCCCcEEEEe-cccCCch---hHHHHHHHHHHhcCCeEEEEccccc-------ccccccchhhHHHHHHHHHHHH
Q 015271 16 WGRKAASFRGIVVLF-SWVSVHE---HQLRSFVDLYSSLGWNSLVSNSHFL-------DAFYPERATSLAFVLINELVEE 84 (410)
Q Consensus 16 w~~~~~~~kpLVIL~-GW~gA~~---rhL~KY~~lY~~lG~n~Llv~s~~~-------~l~~p~~~~~~A~~vL~eL~~~ 84 (410)
|.+++.++.|+||++ +|..... .....+.+.+.+.||.+++++.+-. ..+.. ....-+.++|+++.+.
T Consensus 14 ~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~-~~~~D~~~~i~~l~~q 92 (550)
T TIGR00976 14 YRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGS-DEAADGYDLVDWIAKQ 92 (550)
T ss_pred EecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCc-ccchHHHHHHHHHHhC
Confidence 444444456766654 4443321 1223467788999999999986521 11111 1122344566666543
Q ss_pred hccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCch
Q 015271 85 LRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFT 145 (410)
Q Consensus 85 ~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~ 145 (410)
. -...+|.+.++|.||..++..+.. . .+.++++|..++..+..
T Consensus 93 ~-~~~~~v~~~G~S~GG~~a~~~a~~----------~-------~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 93 P-WCDGNVGMLGVSYLAVTQLLAAVL----------Q-------PPALRAIAPQEGVWDLY 135 (550)
T ss_pred C-CCCCcEEEEEeChHHHHHHHHhcc----------C-------CCceeEEeecCcccchh
Confidence 2 112359999999777433321110 1 13789999888877664
No 106
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=90.38 E-value=13 Score=36.09 Aligned_cols=59 Identities=22% Similarity=0.257 Sum_probs=46.8
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGL 266 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~F 266 (410)
.+..||.|-.|+.+|.+||.++..+||+.... -+++..|++.|. |-.|..+-.+.+..|
T Consensus 196 Id~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHn--yt~~q~~l~~lgl~f 254 (269)
T KOG4667|consen 196 IDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHN--YTGHQSQLVSLGLEF 254 (269)
T ss_pred cCccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcC--ccchhhhHhhhccee
Confidence 67889999999999999999999999998754 468899999997 444555554444444
No 107
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=90.28 E-value=0.87 Score=43.86 Aligned_cols=66 Identities=20% Similarity=0.214 Sum_probs=53.5
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhhhh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYS 275 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~ 275 (410)
.++.+|.|-|+++.|.++|.+.++.+++..++. .+..+..+ |+-=....|.+.|.+|+........
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~Hpgg---H~VP~~~~~~~~i~~fi~~~~~~~~ 225 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-----TVLEHPGG---HIVPNKAKYKEKIADFIQSFLQEES 225 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCC-----eEEecCCC---ccCCCchHHHHHHHHHHHHHHHhhh
Confidence 457899999999999999999999999997544 55555554 5577788999999999988766554
No 108
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=89.71 E-value=12 Score=37.48 Aligned_cols=185 Identities=15% Similarity=0.199 Sum_probs=90.2
Q ss_pred CCCCcEEEEecccCCchhHHHHHHH-HHHhcCCeEEEEccccccccc--ccc--hhhHHHHHHHHHHHHhccCCCCEEEE
Q 015271 21 ASFRGIVVLFSWVSVHEHQLRSFVD-LYSSLGWNSLVSNSHFLDAFY--PER--ATSLAFVLINELVEELRIQTCPVVFV 95 (410)
Q Consensus 21 ~~~kpLVIL~GW~gA~~rhL~KY~~-lY~~lG~n~Llv~s~~~~l~~--p~~--~~~~A~~vL~eL~~~~~~~~~pIv~H 95 (410)
+++.++||-+...-.+.... ||.. ...++|..++.+.-|-..+.- +.- ...-=...++.|++...... .+++-
T Consensus 32 gs~~gTVv~~hGsPGSH~DF-kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~-~~i~~ 109 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHNDF-KYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKG-KLIFL 109 (297)
T ss_pred CCCceeEEEecCCCCCccch-hhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCC-ceEEE
Confidence 33566777666444444443 5554 456899999998865322111 110 00001234567777765543 48999
Q ss_pred EecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCc-hhhHhh--hhc-cCcccccCcchhHHHHHH
Q 015271 96 ALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF-TSDFCA--RFG-LHPTIQKIPGLSKLVSWV 171 (410)
Q Consensus 96 ~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~-~~~l~~--~~~-~~~~l~k~~~~p~l~~wv 171 (410)
+=|-|+-.++ ++... .+..|+++=++||.- ...+.. ++. .. .+-.+ +|+ ++
T Consensus 110 gHSrGcenal----~la~~---------------~~~~g~~lin~~G~r~HkgIrp~~r~~~i~-~l~~~--lp~---~~ 164 (297)
T PF06342_consen 110 GHSRGCENAL----QLAVT---------------HPLHGLVLINPPGLRPHKGIRPLSRMETIN-YLYDL--LPR---FI 164 (297)
T ss_pred EeccchHHHH----HHHhc---------------CccceEEEecCCccccccCcCHHHHHHHHH-HHHHH--hhH---HH
Confidence 9996662222 21110 156799999988753 111111 000 00 00000 011 11
Q ss_pred HHhhhhhccccccccc-----------ccchHHHHHHhh---cCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHH
Q 015271 172 AKGVTSGLDGLCLTRF-----------EPQRAEYWRALY---NSVDLGTPFLIICSDNDELAPQQVIYNFARHLL 232 (410)
Q Consensus 172 ~~~i~~~l~~lf~~~~-----------~~~~~~~~~~l~---s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar 232 (410)
...+...++..+.-+. ..+..++..+.- .....+.|.||.||.+|.||--+.+++++..-+
T Consensus 165 ~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 165 INAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred HHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 1111111111100000 011122222210 113445899999999999999999999988753
No 109
>PLN00021 chlorophyllase
Probab=89.46 E-value=2.8 Score=42.21 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=45.3
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHh--------ccCCCCEEE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEEL--------RIQTCPVVF 94 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~--------~~~~~pIv~ 94 (410)
.+.||+++||++... ......+...+.||.++.++-....--........+.++++++.+.. ......+.+
T Consensus 52 ~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 52 YPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 455777788877543 44556666678899998877432110000111222334444444321 111235999
Q ss_pred EEecccHHHHHH
Q 015271 95 VALSGGTKACMH 106 (410)
Q Consensus 95 H~FSgGg~a~l~ 106 (410)
.+.|+||..++.
T Consensus 131 ~GHS~GG~iA~~ 142 (313)
T PLN00021 131 AGHSRGGKTAFA 142 (313)
T ss_pred EEECcchHHHHH
Confidence 999988853333
No 110
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=88.53 E-value=1.6 Score=36.62 Aligned_cols=61 Identities=21% Similarity=0.282 Sum_probs=50.1
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
..|.|+|-++.|+.+|++..+++++++.. -.++.+++..|..+...++-- .++|.+||...
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~s~C~-~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGGSPCV-DKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCCChHH-HHHHHHHHHcC
Confidence 47999999999999999999999888532 479999999999997555555 47788888754
No 111
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=87.92 E-value=3.3 Score=43.82 Aligned_cols=81 Identities=19% Similarity=0.188 Sum_probs=45.1
Q ss_pred CCCcEEEEecccCCc--hhHHHHHHHHHH-h-cCCeEEEEcccccc-cccccc--hh----hHHHHHHHHHHHHhccCCC
Q 015271 22 SFRGIVVLFSWVSVH--EHQLRSFVDLYS-S-LGWNSLVSNSHFLD-AFYPER--AT----SLAFVLINELVEELRIQTC 90 (410)
Q Consensus 22 ~~kpLVIL~GW~gA~--~rhL~KY~~lY~-~-lG~n~Llv~s~~~~-l~~p~~--~~----~~A~~vL~eL~~~~~~~~~ 90 (410)
+.+++|+|+||++.. ..-+...++.+. . ..+|+++++-+-.. ...+.. .. +...++|++|.+.......
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 358899999999753 223444555443 3 25999999854211 111211 01 1123455555444332234
Q ss_pred CEEEEEecccHH
Q 015271 91 PVVFVALSGGTK 102 (410)
Q Consensus 91 pIv~H~FSgGg~ 102 (410)
.+.+-++|+||.
T Consensus 120 ~VhLIGHSLGAh 131 (442)
T TIGR03230 120 NVHLLGYSLGAH 131 (442)
T ss_pred cEEEEEECHHHH
Confidence 599999998884
No 112
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=86.65 E-value=4 Score=39.34 Aligned_cols=190 Identities=14% Similarity=0.122 Sum_probs=110.8
Q ss_pred cccCCCCCCCCcEEEEeccc--CCchhHHHHHHHHHHhcCCeEEEEcccccccc-cccchhhHHHHHHHHHHHHhccCCC
Q 015271 14 LYWGRKAASFRGIVVLFSWV--SVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAF-YPERATSLAFVLINELVEELRIQTC 90 (410)
Q Consensus 14 ~~w~~~~~~~kpLVIL~GW~--gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~-~p~~~~~~A~~vL~eL~~~~~~~~~ 90 (410)
-.|++ +...+-+|.++|.. ....+.-..-+..-.++||.+..+...+..-. .-+..+.-+..-++++++..++.+.
T Consensus 59 DIwg~-~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~ 137 (270)
T KOG4627|consen 59 DIWGS-TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKV 137 (270)
T ss_pred EEecC-CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhccccee
Confidence 36775 33457788888844 34444444555666799999988876654322 1123333455566777887777654
Q ss_pred CEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcchhHHHHH
Q 015271 91 PVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVSW 170 (410)
Q Consensus 91 pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~~p~l~~w 170 (410)
|+|-+=|.|+-- ++|++.+. + + ++|.|.|+=|+-=+..+-.++ ....-.
T Consensus 138 -l~~gGHSaGAHL----a~qav~R~---r-~--------prI~gl~l~~GvY~l~EL~~t------e~g~dl-------- 186 (270)
T KOG4627|consen 138 -LTFGGHSAGAHL----AAQAVMRQ---R-S--------PRIWGLILLCGVYDLRELSNT------ESGNDL-------- 186 (270)
T ss_pred -EEEcccchHHHH----HHHHHHHh---c-C--------chHHHHHHHhhHhhHHHHhCC------cccccc--------
Confidence 889999988831 23333221 1 1 267777776653222221110 000000
Q ss_pred HHHhhhhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccc
Q 015271 171 VAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIG 250 (410)
Q Consensus 171 v~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~ 250 (410)
.+.....+..+-++|.- ...+.|.|+++++.|----.+..++|+..+++ -....|.++.|-.
T Consensus 187 ----------gLt~~~ae~~Scdl~~~----~~v~~~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 187 ----------GLTERNAESVSCDLWEY----TDVTVWILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHYD 248 (270)
T ss_pred ----------CcccchhhhcCccHHHh----cCceeeeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchhh
Confidence 00000112223344432 34678999999999998888999999998765 3577899999976
Q ss_pred hhh
Q 015271 251 HYE 253 (410)
Q Consensus 251 H~r 253 (410)
.+.
T Consensus 249 I~~ 251 (270)
T KOG4627|consen 249 IIE 251 (270)
T ss_pred HHH
Confidence 553
No 113
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=86.16 E-value=1 Score=47.10 Aligned_cols=69 Identities=30% Similarity=0.364 Sum_probs=53.0
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHH----HHHH----HHHHHHHHHhhh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI----QYRA----AITGLLEKAASV 273 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPe----eY~~----aV~~Fl~ka~~~ 273 (410)
...+||.+.+++++|.++||+.|...+.. .|.+|+.... +|+|.+-+-.+|. +||. ....++.++...
T Consensus 327 ~~It~pvy~~a~~~DhI~P~~Sv~~g~~l---~~g~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~ 402 (445)
T COG3243 327 GDITCPVYNLAAEEDHIAPWSSVYLGARL---LGGEVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEH 402 (445)
T ss_pred hhcccceEEEeecccccCCHHHHHHHHHh---cCCceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccC
Confidence 56889999999999999999999877765 4667776665 8999999998775 4555 555555555444
Q ss_pred h
Q 015271 274 Y 274 (410)
Q Consensus 274 ~ 274 (410)
+
T Consensus 403 ~ 403 (445)
T COG3243 403 P 403 (445)
T ss_pred C
Confidence 3
No 114
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=86.04 E-value=8 Score=36.88 Aligned_cols=60 Identities=23% Similarity=0.280 Sum_probs=47.2
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
..|.+..|++.|++||.+--++..+.+++.|..++.+-|++-.|- .-|+|- ..|..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~----~~~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHS----TSPQEL-DDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccc----ccHHHH-HHHHHHHHH
Confidence 358999999999999999999999999999988777777777664 234443 556666665
No 115
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=85.95 E-value=48 Score=34.68 Aligned_cols=54 Identities=13% Similarity=0.194 Sum_probs=37.7
Q ss_pred cEEEE-eeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 207 PFLII-CSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 207 P~LyI-YS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
.++|| +|+.|..+ .+..+++.+.++++|.+++...|++ +| +-.-+...+.+.|.
T Consensus 350 lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GH------d~~~Wr~~L~~~L~ 404 (411)
T PRK10439 350 LRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GH------DALCWRGGLIQGLI 404 (411)
T ss_pred ceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-Cc------CHHHHHHHHHHHHH
Confidence 46777 45556443 6788999999999999999999987 46 33333445555554
No 116
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=84.76 E-value=2 Score=43.73 Aligned_cols=80 Identities=14% Similarity=0.246 Sum_probs=44.6
Q ss_pred CCCcEEEEecccCCc--hhHHHHHHHHHHh---cCCeEEEEccc-ccccccccc--hhh----HHHHHHHHHHHHhccCC
Q 015271 22 SFRGIVVLFSWVSVH--EHQLRSFVDLYSS---LGWNSLVSNSH-FLDAFYPER--ATS----LAFVLINELVEELRIQT 89 (410)
Q Consensus 22 ~~kpLVIL~GW~gA~--~rhL~KY~~lY~~---lG~n~Llv~s~-~~~l~~p~~--~~~----~A~~vL~eL~~~~~~~~ 89 (410)
+.+.+|+++||.+.. ..-+.+.++.|.+ ..+|+++|+=. ...-.+... ... ...++|..|.+......
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 356788999999977 5678888886655 48899888732 222122211 111 22345556664433333
Q ss_pred CCEEEEEecccH
Q 015271 90 CPVVFVALSGGT 101 (410)
Q Consensus 90 ~pIv~H~FSgGg 101 (410)
..|.+-+||.||
T Consensus 150 ~~ihlIGhSLGA 161 (331)
T PF00151_consen 150 ENIHLIGHSLGA 161 (331)
T ss_dssp GGEEEEEETCHH
T ss_pred hHEEEEeeccch
Confidence 459999999998
No 117
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=83.90 E-value=12 Score=41.59 Aligned_cols=64 Identities=17% Similarity=0.137 Sum_probs=58.7
Q ss_pred CcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 206 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 206 ~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
-+-|++|+-=|+-|.....-.++.++-+.|..-+++.|++-.|-=--....+-|...+..|+++
T Consensus 803 nRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 803 NRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 3568899999999999999999999999999999999999999877778888999999999986
No 118
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=81.50 E-value=4 Score=42.00 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=39.7
Q ss_pred cccccchhhHHHHHHHHHHHHhccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCC
Q 015271 64 AFYPERATSLAFVLINELVEELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVD 143 (410)
Q Consensus 64 l~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~ 143 (410)
+=+|......+..++...+..+.-++.-|++.++|.||+..++.+. .-+.|||+|+|.+.-|
T Consensus 285 ~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs------------------~YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 285 LPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAAS------------------NYPDVKAVVLDATFDD 346 (517)
T ss_pred CCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhh------------------cCCCceEEEeecchhh
Confidence 3334333333444455556665555555999999988864444211 1258999999998666
Q ss_pred chh
Q 015271 144 FTS 146 (410)
Q Consensus 144 ~~~ 146 (410)
...
T Consensus 347 llp 349 (517)
T KOG1553|consen 347 LLP 349 (517)
T ss_pred hhh
Confidence 544
No 119
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=81.50 E-value=9.4 Score=37.45 Aligned_cols=219 Identities=18% Similarity=0.199 Sum_probs=109.6
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccc-----------cc-hhhHHHHHHHHHHHHhccCCC
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYP-----------ER-ATSLAFVLINELVEELRIQTC 90 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p-----------~~-~~~~A~~vL~eL~~~~~~~~~ 90 (410)
.++.+++-+=.|-......++++.-.+.||.||+++-+-..--.| +. .++++ .+|+.+.+..+ ..
T Consensus 29 ~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~-aal~~~~~~~~--~~ 105 (281)
T COG4757 29 ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP-AALAALKKALP--GH 105 (281)
T ss_pred CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH-HHHHHHHhhCC--CC
Confidence 355677777778888889999999999999999987442211111 11 11111 12333333333 35
Q ss_pred CEEEEEecccHH-HHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCch-----hhHhhhhccCcccccCcch
Q 015271 91 PVVFVALSGGTK-ACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFT-----SDFCARFGLHPTIQKIPGL 164 (410)
Q Consensus 91 pIv~H~FSgGg~-a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~-----~~l~~~~~~~~~l~k~~~~ 164 (410)
|+++-+=|.||- .++. -| + .+ ---..||-|.++-.. ..+++..+++-..+-..+.
T Consensus 106 P~y~vgHS~GGqa~gL~--~~--------~---~k------~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w 166 (281)
T COG4757 106 PLYFVGHSFGGQALGLL--GQ--------H---PK------YAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFW 166 (281)
T ss_pred ceEEeeccccceeeccc--cc--------C---cc------cceeeEeccccccccchhhhhcccceeeccccccchhhc
Confidence 799999998872 1221 00 1 01 123678888877331 1222211111111111011
Q ss_pred hH-HHHHHHHhhhhhcccccc---cccccchHHHHH--------HhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHH
Q 015271 165 SK-LVSWVAKGVTSGLDGLCL---TRFEPQRAEYWR--------ALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLL 232 (410)
Q Consensus 165 p~-l~~wv~~~i~~~l~~lf~---~~~~~~~~~~~~--------~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar 232 (410)
+. +..++. ++..-+-..+. .+|-++...|.+ +.+ .....|.+++-..+|+-+|+..++.|+.--+
T Consensus 167 ~g~~p~~l~-G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~y--aaVrtPi~~~~~~DD~w~P~As~d~f~~~y~ 243 (281)
T COG4757 167 KGYMPKDLL-GLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVY--AAVRTPITFSRALDDPWAPPASRDAFASFYR 243 (281)
T ss_pred cccCcHhhc-CCCccCcchHHHHHHHHhcCccccccChhHhHHHHHH--HHhcCceeeeccCCCCcCCHHHHHHHHHhhh
Confidence 10 001110 00000000000 012222222221 122 3356899999999999999999999987644
Q ss_pred HcCCCeEEEEc-CCCcccchhhcCHHHHHHHHHHHHH
Q 015271 233 ALGGDVKLVKL-NGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 233 ~~G~~V~l~~F-e~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
.. .+++... +.-.-++|+.-..+.......++++
T Consensus 244 nA--pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 244 NA--PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred cC--cccceecCcccCcccchhhhccchHHHHHHHHH
Confidence 32 2222211 1222477777776666555555554
No 120
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=81.22 E-value=23 Score=32.58 Aligned_cols=103 Identities=13% Similarity=-0.004 Sum_probs=55.6
Q ss_pred CcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEccccccccccc--chhhHHHHHHHHHHHHhccCCCCEEEEEecccH
Q 015271 24 RGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPE--RATSLAFVLINELVEELRIQTCPVVFVALSGGT 101 (410)
Q Consensus 24 kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~--~~~~~A~~vL~eL~~~~~~~~~pIv~H~FSgGg 101 (410)
|||+++.+-.|+.. .-...++.....++++..+..+....-.+. .-..+|...++.+....+. .|++|-|+|.||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~--gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPE--GPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSS--SSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCC--CCeeehccCccH
Confidence 56777777666433 224444444333333566665544311111 1223666777777666554 379999999877
Q ss_pred HHHHHHHHHHHHhhhcCCCCcchhhhhhcCc-eEEEEeCCCCC
Q 015271 102 KACMHKAFQIIQATCEGQLNVDESRLIRSCV-AGQIYDSSPVD 143 (410)
Q Consensus 102 ~a~l~~~~qll~~~~~~~l~~~~~~~v~~~I-kG~I~DS~Pg~ 143 (410)
..++ .+++.|+.. -..+ .-+++|+.|-.
T Consensus 78 ~lA~-E~A~~Le~~-------------G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 78 ILAF-EMARQLEEA-------------GEEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHH-HHHHHHHHT-------------T-SESEEEEESCSSTT
T ss_pred HHHH-HHHHHHHHh-------------hhccCceEEecCCCCC
Confidence 4333 344545432 0144 35579987543
No 121
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=80.21 E-value=62 Score=31.72 Aligned_cols=63 Identities=17% Similarity=0.251 Sum_probs=48.5
Q ss_pred CCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHH
Q 015271 201 SVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 268 (410)
Q Consensus 201 ~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ 268 (410)
..+..||...+.+++|..|.++++.+..+.. +.+.+++.|+| .|- ++++..++-.+.+.+.|.
T Consensus 172 ~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t---~~~f~l~~fdG-gHF-fl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 172 PAPLACPIHAFGGEKDHEVSRDELGAWREHT---KGDFTLRVFDG-GHF-FLNQQREEVLARLEQHLA 234 (244)
T ss_pred CCCcCcceEEeccCcchhccHHHHHHHHHhh---cCCceEEEecC-cce-ehhhhHHHHHHHHHHHhh
Confidence 3578899999999999999999988777665 34678888865 454 566677777777776665
No 122
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=78.97 E-value=67 Score=31.94 Aligned_cols=236 Identities=14% Similarity=0.147 Sum_probs=102.9
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccc---------cchhhHHHHHHHHHHHHhccCCCCEE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYP---------ERATSLAFVLINELVEELRIQTCPVV 93 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p---------~~~~~~A~~vL~eL~~~~~~~~~pIv 93 (410)
..++|||....+.+.+|..--++.....||.++.+++- .+.+.. +.+..-...++++|. .... ..+-
T Consensus 29 ~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl-~HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~--~~~G 104 (294)
T PF02273_consen 29 RNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSL-NHVGLSSGDINEFTMSIGKASLLTVIDWLA-TRGI--RRIG 104 (294)
T ss_dssp -S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE----B-------------HHHHHHHHHHHHHHHH-HTT-----EE
T ss_pred cCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEecccc-ccccCCCCChhhcchHHhHHHHHHHHHHHH-hcCC--Ccch
Confidence 56999999999999999999999999999999999865 222221 111111223455555 3222 2378
Q ss_pred EEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhcc---CcccccCcch------
Q 015271 94 FVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGL---HPTIQKIPGL------ 164 (410)
Q Consensus 94 ~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~---~~~l~k~~~~------ 164 (410)
+-.-|.-|-. -|.++. . ..+..+|-==+.+++..++.+++.. ...+...|.-
T Consensus 105 LIAaSLSaRI-Ay~Va~--------~----------i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh 165 (294)
T PF02273_consen 105 LIAASLSARI-AYEVAA--------D----------INLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGH 165 (294)
T ss_dssp EEEETTHHHH-HHHHTT--------T----------S--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTE
T ss_pred hhhhhhhHHH-HHHHhh--------c----------cCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCccccccc
Confidence 8888866621 122221 0 1344455444556665544443321 0000000000
Q ss_pred hH-HHHHHHHhhhhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEc
Q 015271 165 SK-LVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKL 243 (410)
Q Consensus 165 p~-l~~wv~~~i~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~F 243 (410)
.. .-.|+.-- +-..|..... +.-......+|.+-++...|.-|...+|+++...... ..+++...
T Consensus 166 ~l~~~vFv~dc--------~e~~w~~l~S----T~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s--~~~klysl 231 (294)
T PF02273_consen 166 NLGAEVFVTDC--------FEHGWDDLDS----TINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINS--NKCKLYSL 231 (294)
T ss_dssp EEEHHHHHHHH--------HHTT-SSHHH----HHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT----EEEEEE
T ss_pred ccchHHHHHHH--------HHcCCccchh----HHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCC--CceeEEEe
Confidence 00 00111100 0001111111 1111245678999999999999999999999886543 35789999
Q ss_pred CCCcccchhhcCHHHHHHHHHHHHHHHhhhhhhHhhhhccccCCCCchhhhhHH-Hhhhhhhhcc
Q 015271 244 NGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEISGMEGTHDEISEL-ICDLQNVAVN 307 (410)
Q Consensus 244 e~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 307 (410)
.||.|= +..+|.. +++|.+...+-- +.|..+.. ....+|.|| +-+|--+++|
T Consensus 232 ~Gs~Hd--L~enl~v----lrnfy~svtkaa---iald~~~~---~l~~~~~ep~fe~lt~~tv~ 284 (294)
T PF02273_consen 232 PGSSHD--LGENLVV----LRNFYQSVTKAA---IALDSGSL---DLDIDIIEPTFEDLTIATVN 284 (294)
T ss_dssp TT-SS---TTSSHHH----HHHHHHHHHHHH---HHHHTT---------------HHHHHHHHHH
T ss_pred cCccch--hhhChHH----HHHHHHHHHHHH---HhhcCCce---eeeccccCCCHHHHHHHHHH
Confidence 999994 6666654 344444433222 34444333 234455554 3455544444
No 123
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=75.86 E-value=30 Score=33.20 Aligned_cols=85 Identities=16% Similarity=0.259 Sum_probs=50.6
Q ss_pred CCCcEEEEecccCCchhHHHHHHHHHHhcCCeE--EEEccc----ccccccccchhhHHHHHHHHHHHHhccC--CCCEE
Q 015271 22 SFRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNS--LVSNSH----FLDAFYPERATSLAFVLINELVEELRIQ--TCPVV 93 (410)
Q Consensus 22 ~~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~--Llv~s~----~~~l~~p~~~~~~A~~vL~eL~~~~~~~--~~pIv 93 (410)
...-+|.++||...-+.-+.+++++...+++.. +++.=| ...+..-+.....+.+.|.+++...... ...|.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 356789999999998899999999999999875 333311 1122211111223344455555443222 22366
Q ss_pred EEEecccHHHHHH
Q 015271 94 FVALSGGTKACMH 106 (410)
Q Consensus 94 ~H~FSgGg~a~l~ 106 (410)
+-+=|||+...+.
T Consensus 97 ilaHSMG~rv~~~ 109 (233)
T PF05990_consen 97 ILAHSMGNRVLLE 109 (233)
T ss_pred EEEeCchHHHHHH
Confidence 6666799964444
No 124
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=70.17 E-value=23 Score=35.78 Aligned_cols=92 Identities=18% Similarity=0.127 Sum_probs=50.7
Q ss_pred CCccccCCCC---CCCCcEEEEecccCCc---hhHHHHHHHHHHhcCCeEEEEccc------c--cccccccc---h---
Q 015271 11 GSSLYWGRKA---ASFRGIVVLFSWVSVH---EHQLRSFVDLYSSLGWNSLVSNSH------F--LDAFYPER---A--- 70 (410)
Q Consensus 11 ~~~~~w~~~~---~~~kpLVIL~GW~gA~---~rhL~KY~~lY~~lG~n~Llv~s~------~--~~l~~p~~---~--- 70 (410)
+++.||.... .+.+||||+|+..+.+ ..|..-+-++-...||=|+-.++- . ...+.|+. +
T Consensus 45 ~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~dd 124 (312)
T COG3509 45 LKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDD 124 (312)
T ss_pred CccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccH
Confidence 3468998653 3355788887765543 334444455555666655444221 1 12222442 1
Q ss_pred hhHHHHHHHHHHHHhccCCCCEEEEEecccHH
Q 015271 71 TSLAFVLINELVEELRIQTCPVVFVALSGGTK 102 (410)
Q Consensus 71 ~~~A~~vL~eL~~~~~~~~~pIv~H~FSgGg~ 102 (410)
.....+++..|+.+....+..|.+-+.|+||.
T Consensus 125 Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~ 156 (312)
T COG3509 125 VGFLRALVAKLVNEYGIDPARVYVTGLSNGGR 156 (312)
T ss_pred HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHH
Confidence 12233455555555544455599999998884
No 125
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=69.52 E-value=12 Score=38.15 Aligned_cols=48 Identities=23% Similarity=0.229 Sum_probs=42.8
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCH
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYP 256 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hP 256 (410)
|.|++-.+.|.|. ++-...++++++.|++|+...+++..|+.|....-
T Consensus 270 ~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~ 317 (336)
T KOG1515|consen 270 PTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPS 317 (336)
T ss_pred ceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCc
Confidence 5899999999998 66678899999999999999999999999998775
No 126
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=69.39 E-value=40 Score=31.77 Aligned_cols=76 Identities=14% Similarity=0.105 Sum_probs=39.2
Q ss_pred EEEEecccCCchhHHHHHHHHHHh---cCCeE-EEEcccccccccccchhh-HHHHHHHHHHHHh---ccCCCCEEEEEe
Q 015271 26 IVVLFSWVSVHEHQLRSFVDLYSS---LGWNS-LVSNSHFLDAFYPERATS-LAFVLINELVEEL---RIQTCPVVFVAL 97 (410)
Q Consensus 26 LVIL~GW~gA~~rhL~KY~~lY~~---lG~n~-Llv~s~~~~l~~p~~~~~-~A~~vL~eL~~~~---~~~~~pIv~H~F 97 (410)
+|+++|..| ++.++....+.... ..++. +++............+.+ .+..+++|+.+.. +...++|.|-+-
T Consensus 7 vV~vHGL~G-~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgH 85 (217)
T PF05057_consen 7 VVFVHGLWG-NPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFIGH 85 (217)
T ss_pred EEEeCCCCC-CHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEEEe
Confidence 455555554 46777655555554 33333 333322222222222222 4555666666553 222357999999
Q ss_pred cccHH
Q 015271 98 SGGTK 102 (410)
Q Consensus 98 SgGg~ 102 (410)
|+||.
T Consensus 86 SLGGl 90 (217)
T PF05057_consen 86 SLGGL 90 (217)
T ss_pred cccHH
Confidence 98884
No 127
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=68.20 E-value=23 Score=34.23 Aligned_cols=110 Identities=10% Similarity=0.048 Sum_probs=59.6
Q ss_pred CCCCCCcEEEEecccCCchhHHHHHH----------HHHHhcCCeEEEEcccc----cccccc--cchhhHHHHHHHHHH
Q 015271 19 KAASFRGIVVLFSWVSVHEHQLRSFV----------DLYSSLGWNSLVSNSHF----LDAFYP--ERATSLAFVLINELV 82 (410)
Q Consensus 19 ~~~~~kpLVIL~GW~gA~~rhL~KY~----------~lY~~lG~n~Llv~s~~----~~l~~p--~~~~~~A~~vL~eL~ 82 (410)
+..++-|+|+..+=.+.......... +.|.+.||.+|+++.+- ...+.+ .....-+.++|+++.
T Consensus 15 ~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~ 94 (272)
T PF02129_consen 15 DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIA 94 (272)
T ss_dssp TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHH
T ss_pred CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHH
Confidence 44557788888765553321111111 12999999999998652 222222 122334567887776
Q ss_pred HHhccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchh
Q 015271 83 EELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTS 146 (410)
Q Consensus 83 ~~~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~ 146 (410)
+. +-....|...+.|-+|..++..+.+ -.+.+|++|--+++.+...
T Consensus 95 ~Q-pws~G~VGm~G~SY~G~~q~~~A~~-----------------~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 95 AQ-PWSNGKVGMYGISYGGFTQWAAAAR-----------------RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HC-TTEEEEEEEEEETHHHHHHHHHHTT-----------------T-TTEEEEEEESE-SBTCC
T ss_pred hC-CCCCCeEEeeccCHHHHHHHHHHhc-----------------CCCCceEEEecccCCcccc
Confidence 64 3223349999999555322221110 1138899999888887744
No 128
>PLN02872 triacylglycerol lipase
Probab=67.49 E-value=19 Score=37.46 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=43.0
Q ss_pred CCcEEEEecccCCchhH-----HHHHHHHHHhcCCeEEEEccccccc-------------ccccchhhHH----HHHHHH
Q 015271 23 FRGIVVLFSWVSVHEHQ-----LRSFVDLYSSLGWNSLVSNSHFLDA-------------FYPERATSLA----FVLINE 80 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rh-----L~KY~~lY~~lG~n~Llv~s~~~~l-------------~~p~~~~~~A----~~vL~e 80 (410)
.+|+++++|++++...- ...-+....+.||+|++.+.+-... +|.-.-...| ..+|+.
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~ 153 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHY 153 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHH
Confidence 46788888987655431 1223345678999998887543211 1110111223 234444
Q ss_pred HHHHhccCCCCEEEEEecccHH
Q 015271 81 LVEELRIQTCPVVFVALSGGTK 102 (410)
Q Consensus 81 L~~~~~~~~~pIv~H~FSgGg~ 102 (410)
+.+.. ..++.+-++|+||.
T Consensus 154 i~~~~---~~~v~~VGhS~Gg~ 172 (395)
T PLN02872 154 VYSIT---NSKIFIVGHSQGTI 172 (395)
T ss_pred HHhcc---CCceEEEEECHHHH
Confidence 44322 24699999998885
No 129
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=65.16 E-value=15 Score=29.26 Aligned_cols=45 Identities=11% Similarity=0.316 Sum_probs=32.0
Q ss_pred ccCCCCCCCCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEccc
Q 015271 15 YWGRKAASFRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSH 60 (410)
Q Consensus 15 ~w~~~~~~~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~ 60 (410)
.|.++.. ++++|+|+.-++.........++...+.||.|+.++-+
T Consensus 8 ~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~r 52 (79)
T PF12146_consen 8 RWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHR 52 (79)
T ss_pred EecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 4665544 78888888877655444555556677899999988754
No 130
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=64.85 E-value=1.4e+02 Score=32.22 Aligned_cols=188 Identities=16% Similarity=0.176 Sum_probs=97.2
Q ss_pred CCcEEEEecccCCchhHHHHHHHH--HHhcCCeEEEEc-ccccc--cccccc-hhhHHHHHHHHHHHHhccCCCCEEEEE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDL--YSSLGWNSLVSN-SHFLD--AFYPER-ATSLAFVLINELVEELRIQTCPVVFVA 96 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~l--Y~~lG~n~Llv~-s~~~~--l~~p~~-~~~~A~~vL~eL~~~~~~~~~pIv~H~ 96 (410)
.+||.|=|+.. ++ ..-+--. -+++|--.|++. ++... |..-+. -.+-.+++|...++.+.-...-+++-+
T Consensus 288 KPPL~VYFSGy--R~--aEGFEgy~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLILSG 363 (511)
T TIGR03712 288 KPPLNVYFSGY--RP--AEGFEGYFMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLILSG 363 (511)
T ss_pred CCCeEEeeccC--cc--cCcchhHHHHHhcCCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeeecc
Confidence 68999999944 43 1222222 246666666654 44432 221112 123345666666666554445599999
Q ss_pred ecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhhHhhhhccCcccccCcc-hhHHHHHHHHhh
Q 015271 97 LSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPG-LSKLVSWVAKGV 175 (410)
Q Consensus 97 FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~l~~~~~~~~~l~k~~~-~p~l~~wv~~~i 175 (410)
.|||.+.++|-.. .+ ..+++|+==+-+.. .+++.+.. +. .|. .+..+-.+. ..
T Consensus 364 lSMGTfgAlYYga---------~l----------~P~AIiVgKPL~NL-GtiA~n~r----L~-RP~~F~TslDvl~-~~ 417 (511)
T TIGR03712 364 LSMGTFGALYYGA---------KL----------SPHAIIVGKPLVNL-GTIASRMR----LD-RPDEFGTALDILL-LN 417 (511)
T ss_pred ccccchhhhhhcc---------cC----------CCceEEEcCcccch-hhhhcccc----cc-CCCCCchHHHhHH-hh
Confidence 9999988888322 23 44566653222221 11222111 11 111 111111000 00
Q ss_pred hhhcccccccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcC
Q 015271 176 TSGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLN 244 (410)
Q Consensus 176 ~~~l~~lf~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe 244 (410)
..++. ..-.+.....||...-+..-.++..-+-|=++|+.= ....+++...+.+.|..|..+-++
T Consensus 418 ~g~~s---~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDYD-~~A~~~L~~~l~~~~~~v~~kG~~ 482 (511)
T TIGR03712 418 TGGTS---SEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDYD-PTAFQDLLPYLSKQGAQVMSKGIP 482 (511)
T ss_pred cCCCC---HHHHHHHHHHHHHHHhhcCcccceEEEEeeccccCC-HHHHHHHHHHHHhcCCEEEecCCC
Confidence 11111 111334456688875444445567777788888874 456688888877777777666654
No 131
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=63.48 E-value=2.8 Score=39.81 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=97.0
Q ss_pred cEEEEeeCCC-CccCHHHHHHHHHHHHHcC--CC-eEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhhh-hhHhhhh
Q 015271 207 PFLIICSDND-ELAPQQVIYNFARHLLALG--GD-VKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVY-SQRIRQL 281 (410)
Q Consensus 207 P~LyIYS~~D-~LVp~~dVe~~a~~ar~~G--~~-V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~-~~~~~~~ 281 (410)
|.+++|+=.. -..-+..+.+..+...+.+ .+ +.-..|+.+|+..++ ....+++.+....... ...+ .... .
T Consensus 67 ~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~ 142 (240)
T PF05705_consen 67 PPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY-SSSARAFSAALPKSSP-RWFVPLWPL--L 142 (240)
T ss_pred CCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc-ccHHHHHHHHcCccch-hhHHHHHHH--H
Confidence 4666666554 4444455554444433222 23 788899999999999 6666666655332211 0000 0000 0
Q ss_pred ccccCCCCchhhhhHHHhhhhhhhccccccccccccCCC--CcccccCCcccc--cCCCCCchhhcccccccCC--CCCC
Q 015271 282 GEISGMEGTHDEISELICDLQNVAVNSNQSLRRVAVEPS--DHFFLPSSTELH--SQESGSLQDERNSRSVYLP--TPSI 355 (410)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~ 355 (410)
.... ...-+...++..++.....++.++.....|. -+.|+-|..+-. .++++...+|+|+.-..+- .=.-
T Consensus 143 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~ 218 (240)
T PF05705_consen 143 QFLL----RLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFED 218 (240)
T ss_pred HHHH----HHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 0000 1122333344455555555555666666664 488999988866 8888889888877443333 3345
Q ss_pred CcccchhhhhhcccccCCCCCc
Q 015271 356 SAHSVLGEFLFDVCVPKNVEGW 377 (410)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~ 377 (410)
+||-...+.-.|.|+.+..|.|
T Consensus 219 S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 219 SPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CchhhhcccCHHHHHHHHHhhC
Confidence 8999999999999999998887
No 132
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=61.23 E-value=16 Score=38.22 Aligned_cols=38 Identities=26% Similarity=0.246 Sum_probs=34.7
Q ss_pred CcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEc
Q 015271 206 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKL 243 (410)
Q Consensus 206 ~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~F 243 (410)
+-.+-.||..|+++|.++=+++++..+++|.++++...
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 34466999999999999999999999999999999988
No 133
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=58.57 E-value=23 Score=33.23 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=14.7
Q ss_pred EEEEEecccHHHHHHHHHH
Q 015271 92 VVFVALSGGTKACMHKAFQ 110 (410)
Q Consensus 92 Iv~H~FSgGg~a~l~~~~q 110 (410)
..+.++|+||+.+++.+++
T Consensus 117 ~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEeccCCCcHHHHHHHHh
Confidence 8999999999766664443
No 134
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=55.90 E-value=39 Score=32.38 Aligned_cols=32 Identities=9% Similarity=0.109 Sum_probs=22.6
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNS 54 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~ 54 (410)
.+|+|+++|..+........++..+.+.||..
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~ 32 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCD 32 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--C
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCc
Confidence 37999999999967777899999999999984
No 135
>PRK04940 hypothetical protein; Provisional
Probab=49.92 E-value=2.2e+02 Score=26.58 Aligned_cols=54 Identities=19% Similarity=0.023 Sum_probs=43.6
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHH
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~k 269 (410)
..+.|-.+.|++.+|++..+..+.. -....++|..|- -.+-++|...|.+|+++
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~GGdH~---f~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEELHPY------YEIVWDEEQTHK---FKNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHhccC------ceEEEECCCCCC---CCCHHHHHHHHHHHHhc
Confidence 4588999999999999988877653 025677888776 78889999999999864
No 136
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=49.57 E-value=1.3e+02 Score=31.01 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=60.8
Q ss_pred CCcEEEEec-ccC-CchhHHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHhccCCCCEEEEEeccc
Q 015271 23 FRGIVVLFS-WVS-VHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEELRIQTCPVVFVALSGG 100 (410)
Q Consensus 23 ~kpLVIL~G-W~g-A~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H~FSgG 100 (410)
.+|.||||- -.| .+-..+.|-+..|.+.|+.+++.-++..- +-|.+.|....+.. ..+++-|- -|
T Consensus 137 ~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFR--------AaAiEQL~~w~er~---gv~vI~~~--~G 203 (340)
T COG0552 137 KKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFR--------AAAIEQLEVWGERL---GVPVISGK--EG 203 (340)
T ss_pred CCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecchHH--------HHHHHHHHHHHHHh---CCeEEccC--CC
Confidence 457666554 444 46778999999999999999998776431 23556665555554 24566663 34
Q ss_pred H--HHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCc
Q 015271 101 T--KACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF 144 (410)
Q Consensus 101 g--~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~ 144 (410)
+ .+..|...+.... ..+.-+|.|.+ |+.
T Consensus 204 ~DpAaVafDAi~~Aka---------------r~~DvvliDTA-GRL 233 (340)
T COG0552 204 ADPAAVAFDAIQAAKA---------------RGIDVVLIDTA-GRL 233 (340)
T ss_pred CCcHHHHHHHHHHHHH---------------cCCCEEEEeCc-ccc
Confidence 4 4455655553322 27788999998 666
No 137
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=46.52 E-value=2.9e+02 Score=26.91 Aligned_cols=44 Identities=20% Similarity=0.329 Sum_probs=33.5
Q ss_pred CCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCccc
Q 015271 205 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHI 249 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV 249 (410)
..+..++|+++|.=||-+.-+++.++......++.... ++=+|.
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~Ha 264 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPHA 264 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCC
Confidence 44667899999999999999999998764445555555 666663
No 138
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.22 E-value=1.9e+02 Score=30.13 Aligned_cols=113 Identities=16% Similarity=0.160 Sum_probs=66.0
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeE--EEEccc----ccccccccchhhHHHHHHHHHHHHhccC--CCCEEE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNS--LVSNSH----FLDAFYPERATSLAFVLINELVEELRIQ--TCPVVF 94 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~--Llv~s~----~~~l~~p~~~~~~A~~vL~eL~~~~~~~--~~pIv~ 94 (410)
.+=+|.++|+...=+--+...+++-++.|+.. +++.=+ +..+-.-+.....+.+.|+.++....+. ...|.+
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~i 195 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYL 195 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEE
Confidence 34477778888887888999999999999988 444322 2222222211223344444444332111 123777
Q ss_pred EEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCc
Q 015271 95 VALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF 144 (410)
Q Consensus 95 H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~ 144 (410)
-+=|||.+..|..+-|+... .++.+...|+-+|+=++=.|.
T Consensus 196 lAHSMGtwl~~e~LrQLai~---------~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 196 LAHSMGTWLLMEALRQLAIR---------ADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEecchHHHHHHHHHHHhcc---------CCcchhhhhhheEeeCCCCCh
Confidence 77799997666655554422 222345577778887775544
No 139
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=40.63 E-value=1.2e+02 Score=31.75 Aligned_cols=30 Identities=17% Similarity=0.194 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhccCCCCEEEEEecccHH
Q 015271 73 LAFVLINELVEELRIQTCPVVFVALSGGTK 102 (410)
Q Consensus 73 ~A~~vL~eL~~~~~~~~~pIv~H~FSgGg~ 102 (410)
.|.+++++-+......+..|.+.+.|.||.
T Consensus 159 ~al~wv~~~i~~fggd~~~v~~~G~SaG~~ 188 (493)
T cd00312 159 LALKWVQDNIAAFGGDPDSVTIFGESAGGA 188 (493)
T ss_pred HHHHHHHHHHHHhCCCcceEEEEeecHHHH
Confidence 334444444444444455699999997774
No 140
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=40.50 E-value=72 Score=33.12 Aligned_cols=62 Identities=26% Similarity=0.356 Sum_probs=47.7
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccch--hhcCHHHHHHHHHHHHHH
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGH--YEYYPIQYRAAITGLLEK 269 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H--~r~hPeeY~~aV~~Fl~k 269 (410)
..++|.|.+-.+.|.+.|.++.++.++.++..|. .+.+ +|+| || +-.+.+.|-..|.+||+.
T Consensus 304 ~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i-~S~~-GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 304 RIKAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREI-DSPY-GHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred cCccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEe-cCCC-CchhhhcchhhhhHHHHHHhhc
Confidence 3678999999999999999999999999877664 3333 4544 55 234566688999999874
No 141
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=40.45 E-value=2e+02 Score=27.24 Aligned_cols=95 Identities=19% Similarity=0.281 Sum_probs=50.5
Q ss_pred cEEEEe----cccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccch----hhHHHHHHHHHHHHhccCCCCEEEEE
Q 015271 25 GIVVLF----SWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERA----TSLAFVLINELVEELRIQTCPVVFVA 96 (410)
Q Consensus 25 pLVIL~----GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~----~~~A~~vL~eL~~~~~~~~~pIv~H~ 96 (410)
.+||++ ||-+.. ..-++..++.|+.|+=+++. .+||.++. ......+|+...+.-+. ..+++-+
T Consensus 3 t~~v~~SGDgGw~~~d----~~~a~~l~~~G~~VvGvdsl--~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~--~~vvLiG 74 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLD----KQIAEALAKQGVPVVGVDSL--RYFWSERTPEQTAADLARIIRHYRARWGR--KRVVLIG 74 (192)
T ss_pred EEEEEEeCCCCchhhh----HHHHHHHHHCCCeEEEechH--HHHhhhCCHHHHHHHHHHHHHHHHHHhCC--ceEEEEe
Confidence 455665 454333 33456677999999888764 34444331 11222334333333222 2499999
Q ss_pred ecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCC
Q 015271 97 LSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSS 140 (410)
Q Consensus 97 FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~ 140 (410)
+|-|+-. +--++. .|. ..++.+|+.+++=+.
T Consensus 75 YSFGADv-lP~~~n--------rLp----~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 75 YSFGADV-LPFIYN--------RLP----AALRARVAQVVLLSP 105 (192)
T ss_pred ecCCchh-HHHHHh--------hCC----HHHHhheeEEEEecc
Confidence 9988720 111111 121 145668888877655
No 142
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=40.16 E-value=1.9e+02 Score=28.95 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=18.8
Q ss_pred CCCCcEEEEecccCC--chhHHHHHHHHHHhcCCeEEEE
Q 015271 21 ASFRGIVVLFSWVSV--HEHQLRSFVDLYSSLGWNSLVS 57 (410)
Q Consensus 21 ~~~kpLVIL~GW~gA--~~rhL~KY~~lY~~lG~n~Llv 57 (410)
.+++|+||.+|=.+. .+..|....++-++.-|.+.+.
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~ 41 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVH 41 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EE
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEE
Confidence 457899999996653 3445666666666777877443
No 143
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=39.62 E-value=3.6e+02 Score=26.64 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=47.0
Q ss_pred CCCCCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHhccC--------CCC
Q 015271 20 AASFRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEELRIQ--------TCP 91 (410)
Q Consensus 20 ~~~~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~~~~--------~~p 91 (410)
+++.=||||+++.......--..+.+--.+-||-||.++-............+.+.++++++.+.++.. -..
T Consensus 13 ~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~ 92 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSK 92 (259)
T ss_pred CCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccc
Confidence 355668888888777665443334444457888887777222111111123445667787776643211 023
Q ss_pred EEEEEecccHH
Q 015271 92 VVFVALSGGTK 102 (410)
Q Consensus 92 Iv~H~FSgGg~ 102 (410)
|.+-+=|-||.
T Consensus 93 l~l~GHSrGGk 103 (259)
T PF12740_consen 93 LALAGHSRGGK 103 (259)
T ss_pred eEEeeeCCCCH
Confidence 78888896664
No 144
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=35.99 E-value=5.3e+02 Score=26.94 Aligned_cols=215 Identities=16% Similarity=0.177 Sum_probs=112.7
Q ss_pred ccccCCC-CCC----CCcEEEEecccC----CchhHHHHHHHHHHhcCCeE-EEEcccc-----cccccccchhhHHHHH
Q 015271 13 SLYWGRK-AAS----FRGIVVLFSWVS----VHEHQLRSFVDLYSSLGWNS-LVSNSHF-----LDAFYPERATSLAFVL 77 (410)
Q Consensus 13 ~~~w~~~-~~~----~kpLVIL~GW~g----A~~rhL~KY~~lY~~lG~n~-Llv~s~~-----~~l~~p~~~~~~A~~v 77 (410)
++||-.+ +.. ..|++|-++..| ..+.++.-...+|+.+.-.+ |+.+-.. ...-+|..-.+ ++..
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~q-lv~~ 184 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQ-LVAT 184 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHH-HHHH
Confidence 4599966 322 357777666544 57888888888998876333 4444332 24455543233 3445
Q ss_pred HHHHHHHhccCCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCchhh--Hhhhhcc-
Q 015271 78 INELVEELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDFTSD--FCARFGL- 154 (410)
Q Consensus 78 L~eL~~~~~~~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~~~~--l~~~~~~- 154 (410)
.+.|++..... .|++.|=|.||-.++ .++|.|... +. ..-.+..|+-|+=+..... -......
T Consensus 185 Y~~Lv~~~G~~--nI~LmGDSAGGnL~L-s~LqyL~~~-----~~------~~~Pk~~iLISPWv~l~~~~~~~~~~~~~ 250 (374)
T PF10340_consen 185 YDYLVESEGNK--NIILMGDSAGGNLAL-SFLQYLKKP-----NK------LPYPKSAILISPWVNLVPQDSQEGSSYHD 250 (374)
T ss_pred HHHHHhccCCC--eEEEEecCccHHHHH-HHHHHHhhc-----CC------CCCCceeEEECCCcCCcCCCCCCCccccc
Confidence 57777554432 499999998873222 245544321 11 1245789999986655310 0000000
Q ss_pred CcccccCcchhHHHHHHHHhhhhh----cccc---cccccccchHHHHHHhhcCCCCCCcEEEEeeCCCCccCHHHHHHH
Q 015271 155 HPTIQKIPGLSKLVSWVAKGVTSG----LDGL---CLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNF 227 (410)
Q Consensus 155 ~~~l~k~~~~p~l~~wv~~~i~~~----l~~l---f~~~~~~~~~~~~~~l~s~~~~~~P~LyIYS~~D~LVp~~dVe~~ 227 (410)
+... -+.....+..| ...+... .... +.+.-.-...+-|.... ..+-.+++||+.+.+- ++|+++
T Consensus 251 n~~~-D~l~~~~~~~~-~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~----~~~~vfVi~Ge~Evfr--ddI~~~ 322 (374)
T PF10340_consen 251 NEKR-DMLSYKGLSMF-GDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDIL----KKYSVFVIYGEDEVFR--DDILEW 322 (374)
T ss_pred cccc-cccchhhHHHH-HHhhccccccccccccCCccCcccCCChhHHHHhc----cCCcEEEEECCccccH--HHHHHH
Confidence 0000 00001111111 0110111 0000 11110112356777652 2357888999888775 799999
Q ss_pred HHHHHHcC-----CCeEEEEcCCCcccc
Q 015271 228 ARHLLALG-----GDVKLVKLNGSPHIG 250 (410)
Q Consensus 228 a~~ar~~G-----~~V~l~~Fe~S~HV~ 250 (410)
++.+.+-+ ..++...=++..|++
T Consensus 323 ~~~~~~~~~~~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 323 AKKLNDVKPNKFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred HHHHhhcCccccCCcceEEEecCCcccc
Confidence 99987553 235666677888988
No 145
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=35.39 E-value=1.2e+02 Score=33.57 Aligned_cols=65 Identities=23% Similarity=0.191 Sum_probs=56.5
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCH-HHHHHHHHHHHHHHh
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYP-IQYRAAITGLLEKAA 271 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hP-eeY~~aV~~Fl~ka~ 271 (410)
|.|+--|..|+-|.+-....|+.++++.|.+|-...=.+++|.+---.-+ .++++-+..||.+.+
T Consensus 582 ~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 582 PTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 67888899999999999999999999999998888778999998776666 788888999988764
No 146
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=34.15 E-value=1.6e+02 Score=32.86 Aligned_cols=49 Identities=20% Similarity=0.364 Sum_probs=42.3
Q ss_pred CCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhc
Q 015271 203 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEY 254 (410)
Q Consensus 203 ~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~ 254 (410)
.++.|.||+-+.+|.+++....|++.+++++ .++++..++..|-.-..+
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAIPK 350 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccCCc
Confidence 3678999999999999999999999999875 478889999999765554
No 147
>PF09497 Med12: Transcription mediator complex subunit Med12; InterPro: IPR019035 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med12 is a component of the evolutionarily conserved Mediator complex []. The Med12 subunit may specifically regulate transcription of targets of the Wnt signaling pathway and SHH signaling pathway. Med12 is a negative regulator of the Gli3-dependent sonic hedgehog signaling pathway via its interaction with Gli3 within the Mediator. A complex is formed between Med12, Med13, CDK8 and CycC which is responsible for suppression of transcription []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=32.77 E-value=15 Score=28.64 Aligned_cols=20 Identities=25% Similarity=0.240 Sum_probs=18.3
Q ss_pred CcccchhhhhhcccccCCCC
Q 015271 356 SAHSVLGEFLFDVCVPKNVE 375 (410)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~ 375 (410)
=|||.=|+.|||.|.-+||.
T Consensus 36 iPhg~k~~~ll~~l~~~~VP 55 (64)
T PF09497_consen 36 IPHGIKKEELLEQLCEYNVP 55 (64)
T ss_pred CCCcccHHHHHHHHHHcCCC
Confidence 38999999999999999986
No 148
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=30.86 E-value=2.2e+02 Score=24.23 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=19.1
Q ss_pred HHHHHHHHhccCCCCEEEEEecccHHHHHHHHHH
Q 015271 77 LINELVEELRIQTCPVVFVALSGGTKACMHKAFQ 110 (410)
Q Consensus 77 vL~eL~~~~~~~~~pIv~H~FSgGg~a~l~~~~q 110 (410)
.+..+.+.....+.||++|.=||.=...|+.+.+
T Consensus 74 ~v~~f~~~l~~~~~Pvl~hC~sG~Ra~~l~~l~~ 107 (110)
T PF04273_consen 74 DVEAFADALESLPKPVLAHCRSGTRASALWALAQ 107 (110)
T ss_dssp HHHHHHHHHHTTTTSEEEE-SCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCCChhHHHHHHHHh
Confidence 3334444433345689999999865444554443
No 149
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=29.61 E-value=1.2e+02 Score=31.96 Aligned_cols=66 Identities=15% Similarity=0.058 Sum_probs=41.5
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcC--HHHHHHHHHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY--PIQYRAAITGLLE 268 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~h--PeeY~~aV~~Fl~ 268 (410)
....+|..+.||++|-++..+||+++......... ...+.+++=.|..=+=.+ +++=-+-|-++++
T Consensus 329 ~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~ 396 (403)
T KOG2624|consen 329 TNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLR 396 (403)
T ss_pred cccccCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHH
Confidence 34588999999999999999999999888654432 223334555555443333 3333334444443
No 150
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.54 E-value=78 Score=31.83 Aligned_cols=57 Identities=18% Similarity=0.374 Sum_probs=46.9
Q ss_pred EEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 209 LIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 209 LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
.++-.++|..||-..+..+-+.| -|..|+... -+||..|-.+-++++++|.+-|++.
T Consensus 310 ivv~A~~D~Yipr~gv~~lQ~~W--Pg~eVr~~e---gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 310 IVVQAKEDAYIPRTGVRSLQEIW--PGCEVRYLE---GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEecCCccccccCcHHHHHhC--CCCEEEEee---cCceeeeehhchHHHHHHHHHHHhh
Confidence 45678999999999988888876 355554443 8999999999999999999998865
No 151
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=29.15 E-value=64 Score=35.16 Aligned_cols=60 Identities=18% Similarity=0.346 Sum_probs=40.8
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHH-------HHHHHHcCCCeEEEEcCCCcccchhhcC---HHHHHH
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNF-------ARHLLALGGDVKLVKLNGSPHIGHYEYY---PIQYRA 261 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~-------a~~ar~~G~~V~l~~Fe~S~HV~H~r~h---PeeY~~ 261 (410)
..+++|..+++|..|.++|.+.+-.. .++.+..|..+--..=+.-+|-|.+-+- .+|+.+
T Consensus 294 r~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~~VarkEH~~ 363 (581)
T PF11339_consen 294 RNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSGKVARKEHRE 363 (581)
T ss_pred hhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEeccHhhHHHHHH
Confidence 56789999999999999999988433 3445556655544455556666666542 455533
No 152
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=28.78 E-value=58 Score=28.41 Aligned_cols=53 Identities=19% Similarity=0.110 Sum_probs=39.2
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHHHc-CCCeEEEEcCCCcccchhhcCHHHHHHHH
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLLAL-GGDVKLVKLNGSPHIGHYEYYPIQYRAAI 263 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar~~-G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV 263 (410)
+.+++||. |.--..+.|.++++.+++. |.+|.+-.|+... -.+..+.+|...-
T Consensus 2 kVfI~Ys~-d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~~~---i~~~g~~~W~~~~ 55 (150)
T PF08357_consen 2 KVFISYSH-DSEEHKEWVLALAEFLRQNCGIDVILDQWELNE---IARQGPPRWMERQ 55 (150)
T ss_pred eEEEEeCC-CCHHHHHHHHHHHHHHHhccCCceeecHHhhcc---cccCCHHHHHHHH
Confidence 56889999 6666679999999999999 9999988886422 0134566665544
No 153
>PF14577 SEO_C: Sieve element occlusion C-terminus
Probab=28.09 E-value=1.7e+02 Score=28.66 Aligned_cols=71 Identities=13% Similarity=0.091 Sum_probs=52.4
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHH----HcCCCeEEEEcCCCcccchhhcCH-----------HHHHHHHHHHHHHHh
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLL----ALGGDVKLVKLNGSPHIGHYEYYP-----------IQYRAAITGLLEKAA 271 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar----~~G~~V~l~~Fe~S~HV~H~r~hP-----------eeY~~aV~~Fl~ka~ 271 (410)
...+|||.+|. +=|++|...++ +.+..++++....|.+=...|+.- -+-...|.-||.+..
T Consensus 34 kyI~iYGG~D~----eWIq~Ft~~a~~va~~a~i~LEm~yvGKsn~~e~v~~~~~~i~~e~ls~~~~d~t~v~~FW~rlE 109 (235)
T PF14577_consen 34 KYIFIYGGEDM----EWIQEFTKAARKVAKAADIQLEMVYVGKSNPREQVRKIIATITSEKLSHSWEDPTMVWFFWTRLE 109 (235)
T ss_pred cEEEEECCCCH----HHHHHHHHHHHHHHHhcCCceEEEEecCCChHHHHHHHhhhhhhcccccccCCcchhHHHHHHHH
Confidence 78999999995 55677755544 457888999988877544444321 134467889999999
Q ss_pred hhhhhHhhhh
Q 015271 272 SVYSQRIRQL 281 (410)
Q Consensus 272 ~~~~~~~~~~ 281 (410)
+...+++||.
T Consensus 110 Sm~~SK~qlg 119 (235)
T PF14577_consen 110 SMLFSKIQLG 119 (235)
T ss_pred HHHHHHHhcC
Confidence 9999999984
No 154
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=27.06 E-value=2.3e+02 Score=26.35 Aligned_cols=70 Identities=21% Similarity=0.314 Sum_probs=46.0
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCc--ccchhh-------cCHHHHHHHHHHHHHHHhhhhhhH
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSP--HIGHYE-------YYPIQYRAAITGLLEKAASVYSQR 277 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~--HV~H~r-------~hPeeY~~aV~~Fl~ka~~~~~~~ 277 (410)
..|++||..|--. -+..+..|.++++.|.+|+++--..-. --+++- -+-..|.+++.+|+++....-+++
T Consensus 2 k~LIlYstr~GqT-~kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~~e~L~~k 80 (175)
T COG4635 2 KTLILYSTRDGQT-RKIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKHAEALSTK 80 (175)
T ss_pred ceEEEEecCCCcH-HHHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHHHHHHhcC
Confidence 4799999999876 466677888899999988776432111 111111 134456788999998876655543
No 155
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.43 E-value=97 Score=31.25 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=36.5
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccc
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIG 250 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~ 250 (410)
...+.|.|+.-+--|++||...+-..+++.. .+.+.+.|+.=.|-+
T Consensus 256 ~RiK~pvL~svgL~D~vcpPstqFA~yN~l~---~~K~i~iy~~~aHe~ 301 (321)
T COG3458 256 ARIKVPVLMSVGLMDPVCPPSTQFAAYNALT---TSKTIEIYPYFAHEG 301 (321)
T ss_pred HhhccceEEeecccCCCCCChhhHHHhhccc---CCceEEEeecccccc
Confidence 4567899999999999999999988888753 456677776666754
No 156
>TIGR01391 dnaG DNA primase, catalytic core. This protein contains a CHC2 zinc finger (Pfam:PF01807) and a Toprim domain (Pfam:PF01751).
Probab=25.75 E-value=3.7e+02 Score=28.10 Aligned_cols=92 Identities=29% Similarity=0.390 Sum_probs=59.8
Q ss_pred CcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHH-----HHHHHHHHHhhhhhhHhhh
Q 015271 206 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRA-----AITGLLEKAASVYSQRIRQ 280 (410)
Q Consensus 206 ~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~-----aV~~Fl~ka~~~~~~~~~~ 280 (410)
.+.++|+-++|. ...+.+++.++.+.+.|..|....+++ -.||++|.. ++.+.++++.....-.++.
T Consensus 300 ~~~vvl~~D~D~-aG~~aa~r~~~~l~~~g~~v~v~~lp~-------gkDpdd~l~~~g~~~~~~~l~~a~~~~~f~~~~ 371 (415)
T TIGR01391 300 ADEIILCFDGDK-AGRKAALRAIELLLPLGINVKVIKLPG-------GKDPDEYLRKEGVEALKKLLENSKSLIEFLIAR 371 (415)
T ss_pred CCeEEEEeCCCH-HHHHHHHHHHHHHHHcCCeEEEEECCC-------CCCHHHHHHHhCHHHHHHHHhcCCCHHHHHHHH
Confidence 368999999996 456667778888888898898888875 379999964 6777777755554444433
Q ss_pred hccccCCCCchhhhhHHHhhhhhhhc
Q 015271 281 LGEISGMEGTHDEISELICDLQNVAV 306 (410)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (410)
..+..+.+ +.++....+.++.....
T Consensus 372 ~~~~~~~~-~~~~~~~~~~~~~~~~~ 396 (415)
T TIGR01391 372 LLSNYNLD-TPEEKAKLVEELLPLIK 396 (415)
T ss_pred HHhcCCCC-CHHHHHHHHHHHHHHHH
Confidence 33334442 34444455555544433
No 157
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=24.89 E-value=4.7e+02 Score=26.67 Aligned_cols=224 Identities=15% Similarity=0.154 Sum_probs=112.6
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHh-cCCeEEEEccc--ccccccccch---hhHHHHHHHHHHHHhccCCCCEEEEE
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSS-LGWNSLVSNSH--FLDAFYPERA---TSLAFVLINELVEELRIQTCPVVFVA 96 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~-lG~n~Llv~s~--~~~l~~p~~~---~~~A~~vL~eL~~~~~~~~~pIv~H~ 96 (410)
.-|+.++++..|.+.-.-+.+++.-.+ .-..+|..+-+ -.+-+-++.+ ...+.|+..-+.+-.+..+.+|++-+
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVG 152 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVG 152 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEe
Confidence 457777777777776666666665544 33333444432 3333433332 23455554333333333345799999
Q ss_pred ecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEE-EEeCCCCCchhhHhhhhccCcccccCc-chhHHHHHHHHh
Q 015271 97 LSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQ-IYDSSPVDFTSDFCARFGLHPTIQKIP-GLSKLVSWVAKG 174 (410)
Q Consensus 97 FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~-I~DS~Pg~~~~~l~~~~~~~~~l~k~~-~~p~l~~wv~~~ 174 (410)
=|+||..|.+.+.+ ...+.+.|+ |+|=.-+...+.++.--.+...-|+.. .....+.|-++.
T Consensus 153 HSmGGaIav~~a~~----------------k~lpsl~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~s 216 (343)
T KOG2564|consen 153 HSMGGAIAVHTAAS----------------KTLPSLAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRS 216 (343)
T ss_pred ccccchhhhhhhhh----------------hhchhhhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHhcc
Confidence 99777544443322 112245554 456544333333322000111222110 011234555431
Q ss_pred -hhhhccc----------------ccccccc-cchHHHHHHhhc-----CCCCCCcEEEEeeCCCCccCHHHHHHHHHHH
Q 015271 175 -VTSGLDG----------------LCLTRFE-PQRAEYWRALYN-----SVDLGTPFLIICSDNDELAPQQVIYNFARHL 231 (410)
Q Consensus 175 -i~~~l~~----------------lf~~~~~-~~~~~~~~~l~s-----~~~~~~P~LyIYS~~D~LVp~~dVe~~a~~a 231 (410)
..+..+. -|.++.. .....||..-+. -...++|+|.|--..|.+=.-=- +.
T Consensus 217 g~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdLt----iG-- 290 (343)
T KOG2564|consen 217 GQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDLT----IG-- 290 (343)
T ss_pred ccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCccee----ee--
Confidence 1111111 1111111 123558886443 14567899888887776631000 00
Q ss_pred HHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 232 LALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 232 r~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
+.-++-+++.++.+.|+-| +.-|..-...+..||.+-
T Consensus 291 -QMQGk~Q~~vL~~~GH~v~-ED~P~kva~~~~~f~~Rn 327 (343)
T KOG2564|consen 291 -QMQGKFQLQVLPLCGHFVH-EDSPHKVAECLCVFWIRN 327 (343)
T ss_pred -eeccceeeeeecccCceec-cCCcchHHHHHHHHHhhh
Confidence 0124678899998888866 556999889999998764
No 158
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=24.77 E-value=5.4e+02 Score=24.39 Aligned_cols=107 Identities=17% Similarity=0.109 Sum_probs=52.6
Q ss_pred CCcEEEEecccCCchhHHHHHHHHH--------HhcCCeEEEEcccc-cccccccc---hhhHHHHHHHHHHHHh---cc
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLY--------SSLGWNSLVSNSHF-LDAFYPER---ATSLAFVLINELVEEL---RI 87 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY--------~~lG~n~Llv~s~~-~~l~~p~~---~~~~A~~vL~eL~~~~---~~ 87 (410)
..|++.|+|=.|+- +........- ....++.+.++-.- ...+.... -.....+.++.+.+.. ..
T Consensus 4 g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 4 GIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 47888888966653 3444443332 11234445444221 11111111 0112233444444332 34
Q ss_pred CCCCEEEEEecccHHHHHHHHHHHHHhhhcCCCCcchhhhhhcCceEEEEeCCCCCc
Q 015271 88 QTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF 144 (410)
Q Consensus 88 ~~~pIv~H~FSgGg~a~l~~~~qll~~~~~~~l~~~~~~~v~~~IkG~I~DS~Pg~~ 144 (410)
.+.+|++-+=||||..+... +. + . + ...+.|+++|.=++|-..
T Consensus 83 ~~~~vilVgHSmGGlvar~~-l~-~------~-~-----~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSA-LS-L------P-N-----YDPDSVKTIITLGTPHRG 125 (225)
T ss_pred CCCceEEEEEchhhHHHHHH-Hh-c------c-c-----cccccEEEEEEEcCCCCC
Confidence 45679999999999532221 11 0 0 1 111478899988877544
No 159
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=24.54 E-value=1.3e+02 Score=26.57 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=12.1
Q ss_pred CCCCEE--EEEecccHHH
Q 015271 88 QTCPVV--FVALSGGTKA 103 (410)
Q Consensus 88 ~~~pIv--~H~FSgGg~a 103 (410)
.+.|+| ||+.||-|+.
T Consensus 50 p~KpLVlSfHG~tGtGKn 67 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKN 67 (127)
T ss_pred CCCCEEEEeecCCCCcHH
Confidence 446777 9999998853
No 160
>PRK10945 gene expression modulator; Provisional
Probab=22.98 E-value=20 Score=28.57 Aligned_cols=9 Identities=44% Similarity=0.966 Sum_probs=4.1
Q ss_pred hhcccccCCC
Q 015271 365 LFDVCVPKNV 374 (410)
Q Consensus 365 ~~~~~~~~~~ 374 (410)
||| ||||.|
T Consensus 59 LyD-kVP~~v 67 (72)
T PRK10945 59 LYD-KIPSSV 67 (72)
T ss_pred hHh-hcCHHH
Confidence 444 444443
No 161
>PF14412 AHH: A nuclease family of the HNH/ENDO VII superfamily with conserved AHH
Probab=22.94 E-value=3.1e+02 Score=22.61 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=44.0
Q ss_pred CCccCHHH---HHHHHHHHHHcCCCe----EEEEcC------CCcccchhhcCHHHHHHHHHHHHHHHhhhhhhHhhhhc
Q 015271 216 DELAPQQV---IYNFARHLLALGGDV----KLVKLN------GSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLG 282 (410)
Q Consensus 216 D~LVp~~d---Ve~~a~~ar~~G~~V----~l~~Fe------~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~~~~~~~~ 282 (410)
-.+||... ..+.-..+++.|+++ ..+..+ .+.|. ..||.+|.+.|.+=|+++..
T Consensus 19 HHII~~~~~~~~~~~~~~l~~~g~~in~~~Ngv~Lp~~~~~~~~~H~---g~H~~~Y~~~V~~~L~~~~~---------- 85 (109)
T PF14412_consen 19 HHIIPKNNFERSPKLRKILEKYGIDINDPENGVWLPNSEKPGRPPHR---GRHPNEYNKYVRERLDKIEN---------- 85 (109)
T ss_pred ceecCccchhccHHHHHHHHHcCCCcCCccceeeeeccCCCCcCCcC---CCCcHHHHHHHHHHHHHHHH----------
Confidence 34555553 244444455567653 222222 23454 88999999999999999877
Q ss_pred cccCCCCchhhhhHHHhhhhhhh
Q 015271 283 EISGMEGTHDEISELICDLQNVA 305 (410)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
...+..+++.+-+.++++-.
T Consensus 86 ---~~~~~~~~~~~~l~~i~~~l 105 (109)
T PF14412_consen 86 ---SKKENREEFRKELQKIKNEL 105 (109)
T ss_pred ---HhhcCHHHHHHHHHHHHHHH
Confidence 22335566666666665543
No 162
>TIGR00238 KamA family protein. Note that the E. coli homolog was expressed in E. coli and purified and found not to display display lysine 2,3-aminomutase activity. Active site residues are found in 100 residue extension in B. subtilis. Name changed to KamA family protein.
Probab=22.39 E-value=2.2e+02 Score=28.80 Aligned_cols=116 Identities=17% Similarity=0.209 Sum_probs=65.9
Q ss_pred cEEEEeeCCCCccCHHHHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhhhhhHhhhhccccC
Q 015271 207 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEISG 286 (410)
Q Consensus 207 P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~~~~~~~~~~~~~~ 286 (410)
..+=|++..-...|..-.+++++.+++.|..+-. ..|.+|-+.-.++-.+++....+....+.. ..-|.. |
T Consensus 192 ~~IRi~tr~~~~~P~rit~el~~~L~~~~~~~~~-----vsh~nh~~Ei~~~~~~ai~~L~~aGi~v~~-qtvLl~---g 262 (331)
T TIGR00238 192 VRLRIGTRLPVVIPQRITDELCELLASFELQLML-----VTHINHCNEITEEFAEAMKKLRTVNVTLLN-QSVLLR---G 262 (331)
T ss_pred cEEEeecCCCccCchhcCHHHHHHHHhcCCcEEE-----EccCCChHhCCHHHHHHHHHHHHcCCEEEe-ecceEC---C
Confidence 4566788777777777777888887776655332 236666544334445555443332222222 222221 2
Q ss_pred CCCchhhhhHHHhhhhhhhccccccccccccCCCCcccccCCccc
Q 015271 287 MEGTHDEISELICDLQNVAVNSNQSLRRVAVEPSDHFFLPSSTEL 331 (410)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (410)
.-.+-+++.+++-.|.+..+..---++-.+++.+.||.+|.....
T Consensus 263 vnD~~~~l~~L~~~l~~~gV~pyyl~~~~~~~g~~~f~~~~~~~~ 307 (331)
T TIGR00238 263 VNDRAQILAKLSIALFKVGIIPYYLHYLDKVQGAKHFLVPDAEAA 307 (331)
T ss_pred cCCCHHHHHHHHHHHhhcCeecCeecCcCCCCCcccccCCHHHHH
Confidence 212233366777777777776655666667777789888866443
No 163
>cd00465 URO-D_CIMS_like The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine synthases. Despite their sequence similarities, members of this family have clearly different functions. Uroporphyrinogen decarboxylase (URO-D) decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, an important branching point of the tetrapyrrole biosynthetic pathway. The methyltransferases represented here are important for ability of methanogenic organisms to use other compounds than carbon dioxide for reduction to methane, and methionine synthases transfer a methyl group from a folate cofactor to L-homocysteine in a reaction requiring zinc.
Probab=22.20 E-value=2.5e+02 Score=27.33 Aligned_cols=61 Identities=11% Similarity=0.121 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHhcCCeEEEEccccccc----ccccchhhHHHHHHHHHHHHhccCCCCEEEEEec
Q 015271 38 HQLRSFVDLYSSLGWNSLVSNSHFLDA----FYPERATSLAFVLINELVEELRIQTCPVVFVALS 98 (410)
Q Consensus 38 rhL~KY~~lY~~lG~n~Llv~s~~~~l----~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H~FS 98 (410)
..+.+|++...+.|.+++.+.-+.... ..|+.-...+...++++.+.......++++|.--
T Consensus 144 ~~~~~~~~~~~eaG~d~i~i~dp~~~~~~~~is~~~~~e~~~p~~k~i~~~i~~~~~~~~lH~cg 208 (306)
T cd00465 144 EFILEYAKTLIEAGAKALQIHEPAFSQINSFLGPKMFKKFALPAYKKVAEYKAAGEVPIVHHSCY 208 (306)
T ss_pred HHHHHHHHHHHHhCCCEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCceEEEECC
Confidence 346777788888999988776543332 3443333455566677776543333457777653
No 164
>PRK10391 oriC-binding nucleoid-associated protein; Provisional
Probab=21.83 E-value=24 Score=27.97 Aligned_cols=15 Identities=60% Similarity=0.833 Sum_probs=8.5
Q ss_pred chhhhhhcc-cccCCC
Q 015271 360 VLGEFLFDV-CVPKNV 374 (410)
Q Consensus 360 ~~~~~~~~~-~~~~~~ 374 (410)
+.|--|||+ ||||.|
T Consensus 51 ~~~~kLyD~gkVP~sV 66 (71)
T PRK10391 51 VSGGRLFDLGQVPKSV 66 (71)
T ss_pred HhCccccccccCCHHH
Confidence 344456664 666655
No 165
>PF05716 AKAP_110: A-kinase anchor protein 110 kDa (AKAP 110); InterPro: IPR018292 This family consists of several mammalian protein kinase A anchoring protein 3 (PRKA3) or A-kinase anchor protein 110 kDa (AKAP 110) sequences. Agents that increase intracellular cAMP are potent stimulators of sperm motility. Anchoring inhibitor peptides, designed to disrupt the interaction of the cAMP-dependent protein kinase A (PKA) with A kinase-anchoring proteins (AKAPs), are potent inhibitors of sperm motility. PKA anchoring is a key biochemical mechanism controlling motility. AKAP110 shares compartments with both RI and RII isoforms of PKA and may function as a regulator of both motility- and head-associated functions such as capacitation and the acrosome reaction []. This entry represents a sub group of the A-kinase anschor 110kDa protein.
Probab=21.77 E-value=2.9e+02 Score=30.53 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=26.3
Q ss_pred CCCcEEEEeeCCCCccCHHHHHHHHHHHHHcCCCe
Q 015271 204 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDV 238 (410)
Q Consensus 204 ~~~P~LyIYS~~D~LVp~~dVe~~a~~ar~~G~~V 238 (410)
..+|.||++...|... +..-++.++++++||.|
T Consensus 617 l~VP~LYF~~~~e~~l--eKL~qvs~ra~EKgwkV 649 (685)
T PF05716_consen 617 LNVPMLYFRKDDEGNL--EKLPQVSARAREKGWKV 649 (685)
T ss_pred cCCceEEEecCcHHHH--HHHHHHHHHHHHcCCcH
Confidence 4689999999998765 56666778888888875
No 166
>cd00887 MoeA MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.
Probab=21.67 E-value=2.7e+02 Score=28.84 Aligned_cols=99 Identities=27% Similarity=0.326 Sum_probs=64.5
Q ss_pred CCcEEEEeeCCCCccCH-------H----HHHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHHhhh
Q 015271 205 GTPFLIICSDNDELAPQ-------Q----VIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASV 273 (410)
Q Consensus 205 ~~P~LyIYS~~D~LVp~-------~----dVe~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka~~~ 273 (410)
+.|+.-|-+..|++++. + ...-+...+++.|.++.. ..+..+++++-.+++.+.++++
T Consensus 167 ~~~rv~ii~tGdEl~~~g~~~~~g~i~dsn~~~l~~~l~~~G~~~~~--------~~~v~Dd~~~i~~~l~~a~~~~--- 235 (394)
T cd00887 167 RRPRVAIISTGDELVEPGEPLAPGQIYDSNSYMLAALLRELGAEVVD--------LGIVPDDPEALREALEEALEEA--- 235 (394)
T ss_pred cCCEEEEEeCCCcccCCCCCCCCCEEEEChHHHHHHHHHHCCCEEEE--------eceeCCCHHHHHHHHHHHhhCC---
Confidence 45899999999999832 1 122334446667766533 3467888888777777766542
Q ss_pred hhhHhhhhccccCCCCchhhhhHHHhhhhhhhccccccccccccCCCCcc
Q 015271 274 YSQRIRQLGEISGMEGTHDEISELICDLQNVAVNSNQSLRRVAVEPSDHF 323 (410)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (410)
++-+-...+++ |.+|-+.+.+.++ .-..-|++|+..|.-.+
T Consensus 236 ---DliittGG~s~-g~~D~~~~al~~~-----g~~~~f~gv~~kPG~p~ 276 (394)
T cd00887 236 ---DVVITSGGVSV-GDYDFVKEVLEEL-----GGEVLFHGVAMKPGKPL 276 (394)
T ss_pred ---CEEEEeCCCCC-CcchhHHHHHHhC-----CCeEEEEEEEEecCCCE
Confidence 22233344555 5678778777766 33557999999998654
No 167
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=21.46 E-value=2.1e+02 Score=29.69 Aligned_cols=22 Identities=9% Similarity=0.309 Sum_probs=15.1
Q ss_pred cCCCCCCCCcEEEEecccCCch
Q 015271 16 WGRKAASFRGIVVLFSWVSVHE 37 (410)
Q Consensus 16 w~~~~~~~kpLVIL~GW~gA~~ 37 (410)
||+-.+....+||+++|+++..
T Consensus 48 ~G~ln~~~~n~vlv~h~~tg~~ 69 (389)
T PRK06765 48 YGTLNRAKSNVILITHYFSATS 69 (389)
T ss_pred ccccCCCCCCEEEEeCCCCCch
Confidence 4433344568999999998854
No 168
>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases. This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....
Probab=21.06 E-value=1.1e+02 Score=29.66 Aligned_cols=46 Identities=22% Similarity=0.132 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCeEEEEcCCCcccchhhcCHHHHHHHHHHHHHHH
Q 015271 224 IYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 270 (410)
Q Consensus 224 Ve~~a~~ar~~G~~V~l~~Fe~S~HV~H~r~hPeeY~~aV~~Fl~ka 270 (410)
+++.++.+++...+.-...+.+...++|- .++++|.++|..+=+..
T Consensus 129 ~~~~~~~l~~~~~~~v~~~~~~~D~~GH~-~~~~~~~~~ie~~D~~l 174 (252)
T PF01676_consen 129 AEAAIEALKKDKYDFVFVHVKGTDEAGHR-GDPEAYIEAIERIDRFL 174 (252)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEHHHHHHTT-T-HHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcccCCeEEEeecCcchhhcc-CCHHHHHHHHHHHHHHH
Confidence 57778888777888888899999999995 68999999887765533
No 169
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=20.88 E-value=65 Score=33.97 Aligned_cols=111 Identities=21% Similarity=0.252 Sum_probs=60.1
Q ss_pred CCCCCcEEEEeeCCCCccCHHHHHHHH-HHHHHcCCCeEEEEcCCCcccchh--hcCHHHHHHHHHHHHHHHhhhhhhHh
Q 015271 202 VDLGTPFLIICSDNDELAPQQVIYNFA-RHLLALGGDVKLVKLNGSPHIGHY--EYYPIQYRAAITGLLEKAASVYSQRI 278 (410)
Q Consensus 202 ~~~~~P~LyIYS~~D~LVp~~dVe~~a-~~ar~~G~~V~l~~Fe~S~HV~H~--r~hPeeY~~aV~~Fl~ka~~~~~~~~ 278 (410)
...+.|.+++++.-|.+-. |.-.++ +.+..+|+-+-..--+|-++..|. +.+-++++++|.+++....-+=..|+
T Consensus 186 ~~~p~P~VIv~gGlDs~qe--D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV 263 (411)
T PF06500_consen 186 GEKPYPTVIVCGGLDSLQE--DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRV 263 (411)
T ss_dssp SSS-EEEEEEE--TTS-GG--GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCCCCCEEEEeCCcchhHH--HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhhe
Confidence 3456799999999999873 222233 335567988878888888888775 44555899999999877543333444
Q ss_pred hhhccccCCCCchhhhhHHHhhhhhhhccccccccc-cccCC-CCcccc
Q 015271 279 RQLGEISGMEGTHDEISELICDLQNVAVNSNQSLRR-VAVEP-SDHFFL 325 (410)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~ 325 (410)
.+-|-++|- .-. ++-|+...+ +++. |+++| .+|||.
T Consensus 264 ~~~G~SfGG---y~A-------vRlA~le~~-RlkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 264 GAWGFSFGG---YYA-------VRLAALEDP-RLKAVVALGAPVHHFFT 301 (411)
T ss_dssp EEEEETHHH---HHH-------HHHHHHTTT-T-SEEEEES---SCGGH
T ss_pred EEEEeccch---HHH-------HHHHHhccc-ceeeEeeeCchHhhhhc
Confidence 443333322 211 233333433 7777 56677 477664
No 170
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=20.80 E-value=3.6e+02 Score=25.02 Aligned_cols=55 Identities=16% Similarity=0.179 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHhccCCCCEEEEEecc
Q 015271 40 LRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEELRIQTCPVVFVALSG 99 (410)
Q Consensus 40 L~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~~~~~~pIv~H~FSg 99 (410)
+..|.+.|++.|...+ +-+..+...|+. ..+.+++.+|...+++.. .+++|.+-|
T Consensus 89 Vp~L~~~~~~~Gi~~~--h~PI~D~~aPd~--~~~~~i~~eL~~~L~~g~-~V~vHC~GG 143 (168)
T PF05706_consen 89 VPDLGEAAQARGIAWH--HLPIPDGSAPDF--AAAWQILEELAARLENGR-KVLVHCRGG 143 (168)
T ss_dssp -TTHHHHHHHTT-EEE--E----TTS---H--HHHHHHHHHHHHHHHTT---EEEE-SSS
T ss_pred CccHHHHHHHcCCEEE--ecCccCCCCCCH--HHHHHHHHHHHHHHHcCC-EEEEECCCC
Confidence 3456788888887553 667777777753 223456777777766543 599999995
No 171
>TIGR01464 hemE uroporphyrinogen decarboxylase. This model represents uroporphyrinogen decarboxylase (HemE), which converts uroporphyrinogen III to coproporphyrinogen III. This step takes the pathway toward protoporphyrin IX, a common precursor of both heme and chlorophyll, rather than toward precorrin 2 and its products.
Probab=20.45 E-value=4.9e+02 Score=26.02 Aligned_cols=62 Identities=13% Similarity=0.235 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhcCCeEEEEcccccccccccchhhHHHHHHHHHHHHhccC-CCCEEEEEecccH
Q 015271 39 QLRSFVDLYSSLGWNSLVSNSHFLDAFYPERATSLAFVLINELVEELRIQ-TCPVVFVALSGGT 101 (410)
Q Consensus 39 hL~KY~~lY~~lG~n~Llv~s~~~~l~~p~~~~~~A~~vL~eL~~~~~~~-~~pIv~H~FSgGg 101 (410)
.+.+|++.+.+.|-+.+.+.-+...++.|+.-...+...++++++..+.. +...++| |++|.
T Consensus 181 ~~~~~~~~~~eaGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~ilh-~cg~~ 243 (338)
T TIGR01464 181 ATIEYLVEQVKAGAQAVQIFDSWAGALSPEDFEEFVLPYLKKIIEEVKARLPNVPVIL-FAKGA 243 (338)
T ss_pred HHHHHHHHHHHcCCCEEEEECCccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCEEE-EeCCc
Confidence 35678888888999986654345566766543334444455555543322 1123566 56665
No 172
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=20.21 E-value=3.8e+02 Score=27.94 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=30.9
Q ss_pred CCcEEEEecccCCchhHHHHHHHHHHhcCCeEEEEc
Q 015271 23 FRGIVVLFSWVSVHEHQLRSFVDLYSSLGWNSLVSN 58 (410)
Q Consensus 23 ~kpLVIL~GW~gA~~rhL~KY~~lY~~lG~n~Llv~ 58 (410)
.-|||+|-.-+|.....+.--++...+.||-|...+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~ 105 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPD 105 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEecc
Confidence 689999999999998888888888999999775544
No 173
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=20.03 E-value=5.2e+02 Score=22.81 Aligned_cols=47 Identities=11% Similarity=0.263 Sum_probs=30.4
Q ss_pred CCCCcEEE-EecccCCchhHHHHHHHHH-HhcCCeEEEEcccccccccc
Q 015271 21 ASFRGIVV-LFSWVSVHEHQLRSFVDLY-SSLGWNSLVSNSHFLDAFYP 67 (410)
Q Consensus 21 ~~~kpLVI-L~GW~gA~~rhL~KY~~lY-~~lG~n~Llv~s~~~~l~~p 67 (410)
...||||+ ++||.|.-..++.+-+.-. ...|..+=.|.--....-+|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP 97 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP 97 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC
Confidence 34688876 6799999988888877653 34577664443333344444
Done!