BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015272
(410 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P73548|CDSA_SYNY3 Phosphatidate cytidylyltransferase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cdsA PE=3 SV=1
Length = 293
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 158/271 (58%), Gaps = 10/271 (3%)
Query: 133 VVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTL 192
+++ GGW F+ A +++G REYF++VR++GIA +S + + P LT
Sbjct: 19 LLILGGWYFSAAIALVIYLGLREYFQMVRAKGIAPA-AKTTMVLSLMLLLSATVTPHLT- 76
Query: 193 YFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCG---LS 249
D ++ LL Q A +S+++ GLFY GYLP +WV+LR G ++
Sbjct: 77 -----DAFFPLTGALICFYLLFQPKMATIADISTSLLGLFYGGYLPSYWVRLRLGDGAVN 131
Query: 250 APALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISP 309
L+ + WP ++ GL+ T+++F+ I AAD A+I GK GRT+L+ ISP
Sbjct: 132 PMGLHLPLNGFWPESWAHPENFPTGLLVTILAFACIWAADIGAYIMGKWLGRTRLSDISP 191
Query: 310 KKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAG 369
KKT EG++ G+GG + V+ + WP + + + G L S+ GDLTESM+KRDAG
Sbjct: 192 KKTVEGSLWGVGGSLLVGVLGAWYLQWPYWEITGALLGLLIGIVSLLGDLTESMMKRDAG 251
Query: 370 VKDSGSLIPGHGGILDRVDSYIFTGALAYSF 400
VKDSG LIPGHGGILDR DSY+FT L Y F
Sbjct: 252 VKDSGQLIPGHGGILDRTDSYVFTAPLVYYF 282
>sp|Q9ZML7|CDSA_HELPJ Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
J99) GN=cdsA PE=3 SV=1
Length = 266
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVG--LGGCIATTVVLS 331
G VA + ++A+D AF GGK G+T T+ SP KT EG ++G L + + V +
Sbjct: 125 GAVAIIWLLVVVVASDVGAFFGGKLLGKTPFTATSPNKTLEGALIGVVLASVLGSFVGMG 184
Query: 332 KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 391
K+ A++F FL +VFGDL ES +KR GVKDSG ++PGHGG+LDR+DS +
Sbjct: 185 KL---SGGFLMALLFSFLIALMAVFGDLYESYLKRKVGVKDSGKILPGHGGVLDRLDSML 241
Query: 392 FTGALAYSFVKTFLPLY 408
F GAL+ + FL ++
Sbjct: 242 F-GALSLHVLLYFLEIW 257
>sp|O25004|CDSA_HELPY Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=cdsA PE=3 SV=1
Length = 266
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 6/137 (4%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVG--LGGCIATTVVLS 331
G VA + ++A+D AF GGK G+T T SP KT EG ++G L + + V +
Sbjct: 125 GAVAIIWLLVVVVASDVGAFFGGKLLGKTPFTPTSPNKTLEGALIGVVLASVLGSFVGMG 184
Query: 332 KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 391
K+ A+ F FL +VFGDL ES +KR G+KDSG ++PGHGG+LDR+DS +
Sbjct: 185 KL---SGGFFMALFFSFLIALVAVFGDLYESYLKRKVGIKDSGKILPGHGGVLDRLDSML 241
Query: 392 FTGALAYSFVKTFLPLY 408
F GAL + FL ++
Sbjct: 242 F-GALGLHALLYFLEIW 257
>sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=cdsA PE=3
SV=1
Length = 288
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 17/135 (12%)
Query: 268 LPHWTV----GLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGG 322
L H+T GL L F + AAD+ A+ G+AFG+ +L +SP K+WEG I GG
Sbjct: 142 LEHYTHDPYHGLFLLLYVFILVWAADSGAYFSGRAFGKRKLAPKVSPGKSWEGVI---GG 198
Query: 323 CIATTVVLSKIFCW--------PRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSG 374
I T +VL+ IF R + I+ SV GDLTESM KR++GVKDS
Sbjct: 199 LI-TALVLAFIFIHFSNNTLVGDRNITGFIILSVATVAISVLGDLTESMFKRESGVKDSS 257
Query: 375 SLIPGHGGILDRVDS 389
LIPGHGG+LDR+DS
Sbjct: 258 QLIPGHGGVLDRIDS 272
>sp|P0ABG3|CDSA_SHIFL Phosphatidate cytidylyltransferase OS=Shigella flexneri GN=cdsA
PE=3 SV=2
Length = 285
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 9/107 (8%)
Query: 288 ADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA--- 343
AD+ A++ GK FG+ +L +SP KTW+G I GL AT V+S + L A
Sbjct: 164 ADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVT 219
Query: 344 -IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
++ + SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 220 LLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266
>sp|P0ABG1|CDSA_ECOLI Phosphatidate cytidylyltransferase OS=Escherichia coli (strain K12)
GN=cdsA PE=1 SV=2
Length = 285
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 9/107 (8%)
Query: 288 ADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA--- 343
AD+ A++ GK FG+ +L +SP KTW+G I GL AT V+S + L A
Sbjct: 164 ADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVT 219
Query: 344 -IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
++ + SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 220 LLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266
>sp|P0ABG2|CDSA_ECO57 Phosphatidate cytidylyltransferase OS=Escherichia coli O157:H7
GN=cdsA PE=3 SV=2
Length = 285
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 9/107 (8%)
Query: 288 ADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA--- 343
AD+ A++ GK FG+ +L +SP KTW+G I GL AT V+S + L A
Sbjct: 164 ADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVT 219
Query: 344 -IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
++ + SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 220 LLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266
>sp|Q59640|CDSA_PSEAE Phosphatidate cytidylyltransferase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=cdsA PE=3 SV=2
Length = 271
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 285 IIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA 343
+ AD A+ GKAFG+ +L +SP K+WEG GL +A T+ + W
Sbjct: 145 VWGADIGAYFSGKAFGKRKLAPRVSPGKSWEGVYGGLAASLAITLAVGLYRGWSLGALLL 204
Query: 344 IVFGFLNF-FGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
+ G F S+ GDLTESM KR +G+KDS +L+PGHGG+LDR+DS
Sbjct: 205 ALLGAALVVFVSIVGDLTESMFKRQSGIKDSSNLLPGHGGVLDRIDS 251
>sp|O31752|CDSA_BACSU Phosphatidate cytidylyltransferase OS=Bacillus subtilis (strain
168) GN=cdsA PE=3 SV=1
Length = 269
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 248 LSAPALNTGIGVSWPILLGGLPHWTVGLVATLISFSSIIAADTFAFIGGKAFGRTQL-TS 306
++ A+ G+ + I + L + GL + I + D+ A+ GK+ G+ +L
Sbjct: 113 ITLAAIYIGMCFHYFIEIRNLDQY--GLTYIFYACVVIWSTDSGAYFVGKSLGKRKLWPE 170
Query: 307 ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFL-NFFGSVFG---DLTES 362
ISP KT EG G I +VL+ IF LP ++ L F SVFG DL ES
Sbjct: 171 ISPNKTVEG----FAGGIVIALVLATIFQLVAQLPIPYIYLLLITLFLSVFGQLGDLVES 226
Query: 363 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
+KR VKDSG+++PGHGGILDR DS++F Y + F
Sbjct: 227 ALKRHYDVKDSGNILPGHGGILDRFDSFLFVMPFLYFLLALF 268
>sp|Q68WV5|CDSA_RICTY Phosphatidate cytidylyltransferase OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=cdsA PE=3 SV=1
Length = 228
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 276 VATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGL--GGCIATTVVLSK 332
+ ++ F I + DTFA IGGK F T+L ISPKKTW G I+G G IA V L
Sbjct: 93 LVIMLYFCIIWSVDTFAMIGGKTFKGTKLAPKISPKKTWTGLIIGTISAGLIAVLVSLIP 152
Query: 333 IFCWPRYLPSAIVFGFLNFFGSVFG------DLTESMIKRDAGVKDSGSLIPGHGGILDR 386
+ Y S ++ F+ + DL S KR +KDSG +IPGHGG+LDR
Sbjct: 153 YYHIENYYFSNKIYLFI--ISCILALIAQSSDLFISYFKRKFNIKDSGHIIPGHGGVLDR 210
Query: 387 VDSYIFTG 394
DS I T
Sbjct: 211 FDSIILTA 218
>sp|P63758|CDSA_MYCTU Phosphatidate cytidylyltransferase OS=Mycobacterium tuberculosis
GN=cdsA PE=3 SV=1
Length = 306
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 284 SIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPS 342
++IA+D + G FG+ + +ISPKK+WEG G C T +++ F +
Sbjct: 185 AVIASDVGGYAVGVLFGKHPMVPTISPKKSWEG-FAGSLVCGITATIITATFLVGKTPWI 243
Query: 343 AIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVK 402
+ G L + GDL ES +KRD G+KD G L+PGHGG++DR+D I A+A V
Sbjct: 244 GALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDG-ILPSAVAAWIVL 302
Query: 403 TFLP 406
T LP
Sbjct: 303 TLLP 306
>sp|P63759|CDSA_MYCBO Phosphatidate cytidylyltransferase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cdsA PE=3 SV=1
Length = 306
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 284 SIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPS 342
++IA+D + G FG+ + +ISPKK+WEG G C T +++ F +
Sbjct: 185 AVIASDVGGYAVGVLFGKHPMVPTISPKKSWEG-FAGSLVCGITATIITATFLVGKTPWI 243
Query: 343 AIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVK 402
+ G L + GDL ES +KRD G+KD G L+PGHGG++DR+D I A+A V
Sbjct: 244 GALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDG-ILPSAVAAWIVL 302
Query: 403 TFLP 406
T LP
Sbjct: 303 TLLP 306
>sp|Q9X1B7|CDSA_THEMA Phosphatidate cytidylyltransferase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=cdsA PE=3
SV=1
Length = 270
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLS- 331
G L+ +S D+FA+ G FGRT+++ SP+K+ EG I G G + T +
Sbjct: 129 GAANALLVLTSTWVFDSFAYFTGLKFGRTRISPRYSPRKSLEGVIGGFLGVVIYTFLYRL 188
Query: 332 --------KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGI 383
+ + +LP A ++ FGD+ ES +KR GVKDSG +PGHGG+
Sbjct: 189 VVNDLLSVNVISFRTFLPFAATVAIMD----TFGDIFESALKRHYGVKDSGKTLPGHGGM 244
Query: 384 LDRVDSYIFTGALAY 398
LDR+D +F ++Y
Sbjct: 245 LDRIDGLLFVAPVSY 259
>sp|Q1RII7|CDSA_RICBR Phosphatidate cytidylyltransferase OS=Rickettsia bellii (strain
RML369-C) GN=cdsA PE=3 SV=1
Length = 231
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 279 LISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGL--GGCIATTVVLSKIFC 335
++ F + + D FA IGGK G +L ISPKKTW G I G+ G +AT + F
Sbjct: 98 MLYFCIVWSVDIFAMIGGKTLGGAKLAPKISPKKTWSGLITGILSAGLVATLISFIPSFY 157
Query: 336 WPRYLPSAIVFGFLN----FFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 391
Y S ++ F+ + DL S KR +KDSG++IPGHGG+LDR DS I
Sbjct: 158 IENYYFSNRIYLFIISCTLALTAQLSDLFISYFKRKFNIKDSGNIIPGHGGVLDRFDSII 217
Query: 392 FTGALAY 398
T + +
Sbjct: 218 LTAPILF 224
>sp|P76091|YNBB_ECOLI Uncharacterized protein YnbB OS=Escherichia coli (strain K12)
GN=ynbB PE=3 SV=1
Length = 298
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 289 DTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLP----SA 343
D ++ GK+ GR ++ +SP KT EG +GG I T++++ + P P A
Sbjct: 181 DIAQYLWGKSCGRRKVVPKVSPGKTLEGL---MGGVI--TIMIASLIIGPLLTPLNTLQA 235
Query: 344 IVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVK 402
++ G L GD+ S IKRD GVKDSG L+PGHGG+LDR+DS IFT + + F++
Sbjct: 236 LLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIR 294
>sp|Q9CBU1|CDSA_MYCLE Phosphatidate cytidylyltransferase OS=Mycobacterium leprae (strain
TN) GN=cdsA PE=3 SV=1
Length = 312
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 284 SIIAADTFAFIGGKAFGRTQLTS-ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPS 342
+++A+D + G FG+ L ISP K+WEG G C T +L+ F +
Sbjct: 191 AVVASDVGGYTVGVLFGKHPLVPRISPNKSWEG-FAGSLVCGTTATILTATFLAGKTPWV 249
Query: 343 AIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVK 402
+ F+ GDL ES +KRD G+KD G L+PGHGG++DR+D + + +A++ +
Sbjct: 250 GALLSFVLVLTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVVAWTML- 308
Query: 403 TFLP 406
T LP
Sbjct: 309 TLLP 312
>sp|Q4L5W3|CDSA_STAHJ Phosphatidate cytidylyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=cdsA PE=3 SV=1
Length = 260
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVVLS- 331
GL L +F + DT A+I G+ G+ +L ISP KT EG I GL + +V+
Sbjct: 129 GLHYILYAFLVVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFIGGLICSLIVPIVMLF 188
Query: 332 ----KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRV 387
+ W L + I L+ FG + GDL ES KR GVKDSG ++PGHGGILDR
Sbjct: 189 FVDFNLNIWLLLLVTII----LSIFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRF 243
Query: 388 DSYIFT 393
DS++F
Sbjct: 244 DSFMFV 249
>sp|Q7A121|CDSA_STAAW Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MW2) GN=cdsA PE=3 SV=1
Length = 260
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVV-LS 331
GL L +F + DT A++ GK G+ +L ISP KT EG I GG + +V L+
Sbjct: 129 GLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFI---GGLFCSLIVPLA 185
Query: 332 KIFCWPRYLPSAIVFG---FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
++ + I+ G L+ FG + GDL ES KR GVKDSG ++PGHGGILDR D
Sbjct: 186 MLYFVDFNMNVWILLGVTLILSLFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRFD 244
Query: 389 SYIFT 393
S++F
Sbjct: 245 SFMFV 249
>sp|Q6G9V2|CDSA_STAAS Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=cdsA PE=3 SV=1
Length = 260
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVV-LS 331
GL L +F + DT A++ GK G+ +L ISP KT EG I GG + +V L+
Sbjct: 129 GLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFI---GGLFCSLIVPLA 185
Query: 332 KIFCWPRYLPSAIVFG---FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
++ + I+ G L+ FG + GDL ES KR GVKDSG ++PGHGGILDR D
Sbjct: 186 MLYFVDFNMNVWILLGVTLILSLFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRFD 244
Query: 389 SYIFT 393
S++F
Sbjct: 245 SFMFV 249
>sp|Q6GHH4|CDSA_STAAR Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=cdsA PE=3 SV=1
Length = 260
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVV-LS 331
GL L +F + DT A++ GK G+ +L ISP KT EG I GG + +V L+
Sbjct: 129 GLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFI---GGLFCSLIVPLA 185
Query: 332 KIFCWPRYLPSAIVFG---FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
++ + I+ G L+ FG + GDL ES KR GVKDSG ++PGHGGILDR D
Sbjct: 186 MLYFVDFNMNVWILLGVTLILSLFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRFD 244
Query: 389 SYIFT 393
S++F
Sbjct: 245 SFMFV 249
>sp|Q7A5Y4|CDSA_STAAN Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
N315) GN=cdsA PE=3 SV=1
Length = 260
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVV-LS 331
GL L +F + DT A++ GK G+ +L ISP KT EG I GG + +V L+
Sbjct: 129 GLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFI---GGLFCSLIVPLA 185
Query: 332 KIFCWPRYLPSAIVFG---FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
++ + I+ G L+ FG + GDL ES KR GVKDSG ++PGHGGILDR D
Sbjct: 186 MLYFVDFNMNVWILLGVTLILSLFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRFD 244
Query: 389 SYIFT 393
S++F
Sbjct: 245 SFMFV 249
>sp|Q99UL1|CDSA_STAAM Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=cdsA PE=3 SV=1
Length = 260
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVV-LS 331
GL L +F + DT A++ GK G+ +L ISP KT EG I GG + +V L+
Sbjct: 129 GLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFI---GGLFCSLIVPLA 185
Query: 332 KIFCWPRYLPSAIVFG---FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
++ + I+ G L+ FG + GDL ES KR GVKDSG ++PGHGGILDR D
Sbjct: 186 MLYFVDFNMNVWILLGVTLILSLFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRFD 244
Query: 389 SYIFT 393
S++F
Sbjct: 245 SFMFV 249
>sp|Q5HGH0|CDSA_STAAC Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
COL) GN=cdsA PE=3 SV=1
Length = 260
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVV-LS 331
GL L +F + DT A++ GK G+ +L ISP KT EG I GG + +V L+
Sbjct: 129 GLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFI---GGLFCSLIVPLA 185
Query: 332 KIFCWPRYLPSAIVFG---FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
++ + I+ G L+ FG + GDL ES KR GVKDSG ++PGHGGILDR D
Sbjct: 186 MLYFVDFNMNVWILLGVTLILSLFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRFD 244
Query: 389 SYIFT 393
S++F
Sbjct: 245 SFMFV 249
>sp|Q92I31|CDSA_RICCN Phosphatidate cytidylyltransferase OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=cdsA PE=3 SV=1
Length = 230
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 279 LISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGL--GGCIATTVVLSKIFC 335
++ F + + DTFA IGGK F +L +SPKKTW G + G+ G +A V F
Sbjct: 98 MLYFCIMWSVDTFAMIGGKTFKGAKLAPKLSPKKTWSGLVTGVLSAGLVAVLVSFIPNFH 157
Query: 336 WPRYLPSAIVFGF-----LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSY 390
Y S ++ F L + DL S KR +KDSG +IPGHGG+LDR DS
Sbjct: 158 IENYYFSNKIYLFIISCILALIAQL-SDLFISYFKRKFNIKDSGHIIPGHGGVLDRFDSI 216
Query: 391 IFTGALAY 398
I T + +
Sbjct: 217 ILTTLILF 224
>sp|Q9ZDA8|CDSA_RICPR Phosphatidate cytidylyltransferase OS=Rickettsia prowazekii (strain
Madrid E) GN=cdsA PE=3 SV=1
Length = 228
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 276 VATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIF 334
+ ++ F + + DTFA IGGK F +L ISPKKTW G I G +V++S I
Sbjct: 93 LVIMLYFCILWSVDTFAMIGGKTFKGIKLAPKISPKKTWTGLITGTVSAGLVSVLVSLI- 151
Query: 335 CWPRYLPSAIVFG---FLNFFGSVFG------DLTESMIKRDAGVKDSGSLIPGHGGILD 385
P Y F +L + DL S KR +KDSG +IPGHGG+LD
Sbjct: 152 --PNYHIEHYYFSNKIYLFIISCILALIAQSSDLFISYFKRKFNIKDSGHIIPGHGGVLD 209
Query: 386 RVDSYIFTG 394
R DS I T
Sbjct: 210 RFDSIILTA 218
>sp|Q8CST9|CDSA_STAES Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=cdsA PE=3 SV=1
Length = 260
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVVLS- 331
GL L +F + DT A+I G+ G+ +L ISP KT EG G+ I +V+
Sbjct: 129 GLRYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQM 188
Query: 332 ----KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRV 387
+ W L + + L+ FG + GDL ES KR GVKDSG ++PGHGGILDR
Sbjct: 189 FVDLHMNIWLLLLVTIV----LSMFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRF 243
Query: 388 DSYIFT 393
DS++F
Sbjct: 244 DSFMFV 249
>sp|Q5HPT0|CDSA_STAEQ Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=cdsA PE=3 SV=1
Length = 260
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVVLS- 331
GL L +F + DT A+I G+ G+ +L ISP KT EG G+ I +V+
Sbjct: 129 GLRYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQM 188
Query: 332 ----KIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRV 387
+ W L + + L+ FG + GDL ES KR GVKDSG ++PGHGGILDR
Sbjct: 189 FVDLHMNIWLLLLVTIV----LSMFGQL-GDLVESGFKRHFGVKDSGRILPGHGGILDRF 243
Query: 388 DSYIFT 393
DS++F
Sbjct: 244 DSFMFV 249
>sp|Q4ULR7|CDSA_RICFE Phosphatidate cytidylyltransferase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=cdsA PE=3 SV=1
Length = 227
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 279 LISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGL--GGCIATTVVLSKIFC 335
++ F I + D+FA IGGK F +L ISPKKTW G + G+ G +A F
Sbjct: 96 MLYFCIIWSVDSFAMIGGKTFKGAKLAPKISPKKTWSGLVTGVLSAGLVAVLASFIPNFH 155
Query: 336 WPRYLPSAIVFGFLNFFGSVFG------DLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
Y S ++ F+ + DL S +KR +KDSG +IPGHGG+LDR DS
Sbjct: 156 IENYYFSNKIYLFI--ISCILALIAQSSDLFISYLKRKFNIKDSGHIIPGHGGVLDRFDS 213
Query: 390 YIFTGALAY 398
I T + +
Sbjct: 214 IILTAPVLF 222
>sp|Q49X46|CDSA_STAS1 Phosphatidate cytidylyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=cdsA PE=3 SV=1
Length = 260
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQL-TSISPKKTWEGTIVGLGGCIATTVVLSK 332
GL L +F + DT A+I G+ G+ +L ISP KT EG + GG I + +V
Sbjct: 129 GLHYILFAFLVVWLTDTGAYIFGRLMGKHKLWPVISPNKTVEGFV---GGLICSLIVPLV 185
Query: 333 IFCWPRYLPSAIVFGFLNFFGSVFG---DLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 389
+ + + + + + S+FG DL ES KR GVKDSG ++PGHGGILDR DS
Sbjct: 186 MMIFVDFNIALWLLLIITIILSMFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDS 245
Query: 390 YIFT 393
++F
Sbjct: 246 FMFV 249
>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabidopsis thaliana GN=CDS1
PE=2 SV=1
Length = 421
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 75/178 (42%), Gaps = 46/178 (25%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI 333
G+ L+ S II D FA+I G FGRT L +SPKKTWEG I I + VL+ I
Sbjct: 205 GIFWFLLPASLIIINDIFAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFVLANI 264
Query: 334 ---FCW------------------------PRYLPSAIVFGF----------------LN 350
F W P LP+ I F L
Sbjct: 265 LGRFPWLTCPRQDLSTGWLQCDADPLFKPEPFALPAWIPEWFPWKEMTILPVQWHALCLG 324
Query: 351 FFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 405
F S+ FG S KR +KD G IPGHGGI DR+D + AY ++++F+
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFI 382
>sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, photoreceptor-specific
OS=Drosophila melanogaster GN=CdsA PE=1 SV=2
Length = 447
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 45/177 (25%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI 333
GL+ ++ S I+ D A++ G FGRT L +SPKKTWEG I G + ++ S +
Sbjct: 235 GLIWFIVPVSMIVCNDVMAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYV 294
Query: 334 FCWPRY------------------LPSAI---------VFGF---LNFFGSV-------- 355
C +Y +PS + +FG LN + +
Sbjct: 295 LCNYQYFICPIQYSEEQGRMTMSCVPSYLFTPQEYSLKLFGIGKTLNLYPFIWHSISLSL 354
Query: 356 -------FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 405
FG S KR +KD G +IPGHGGI+DR D ++ +F+
Sbjct: 355 FSSIIGPFGGFFASGFKRAFKIKDFGDMIPGHGGIMDRFDCQFLMATFVNVYISSFI 411
>sp|P75160|CDSA_MYCPN Putative phosphatidate cytidylyltransferase OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=cdsA PE=3 SV=1
Length = 395
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 45/148 (30%)
Query: 286 IAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY------ 339
+ DTFA++ GK FG+ L ISP KTWEG G+ G + T ++ ++ P Y
Sbjct: 212 VCTDTFAYLFGKRFGKNPLIKISPSKTWEGAFFGVTGTVLTISIICVLYSIPNYVRQPSI 271
Query: 340 -------------------LPSAIVFGFLN-----------------FFGSVF---GDLT 360
+ + + F++ F S+F GDL
Sbjct: 272 KDASKTALQTPQNYDVHNLITNVFLISFISGGSTFYIYWWVSTLALIFTASIFAIGGDLF 331
Query: 361 ESMIKRDAGVKDSGSLIPGHGGILDRVD 388
S IKR +KD L+ HGGILDR D
Sbjct: 332 FSYIKRLTKIKDFSKLLGKHGGILDRFD 359
>sp|P38221|CDS1_YEAST Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDS1 PE=1 SV=1
Length = 457
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 71/170 (41%), Gaps = 49/170 (28%)
Query: 285 IIAADTFAFIGGKAFGRTQLTSISPKKTWEGTI-----VGLGGCIATTVV---------- 329
+I D FA++ G FG+T+L ISPKKT EG + L I T ++
Sbjct: 225 VIVNDIFAYLCGITFGKTKLIEISPKKTLEGFLGAWFFTALASIILTRILSPYTYLTCPV 284
Query: 330 -------LSKIFCW--PRYLPSA--------------------IVFGFLNF--FGSVF-- 356
S + C P +LP I F LN F S+F
Sbjct: 285 EDLHTNFFSNLTCELNPVFLPQVYRLPPIFFDKVQINSITVKPIYFHALNLATFASLFAP 344
Query: 357 -GDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 405
G S +KR VKD G IPGHGGI DRVD G+ A + +TF+
Sbjct: 345 FGGFFASGLKRTFKVKDFGHSIPGHGGITDRVDCQFIMGSFANLYYETFI 394
>sp|Q8YHH2|CDSA_BRUME Phosphatidate cytidylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=cdsA PE=3 SV=2
Length = 270
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSK 332
G + F+ + + D A+ G+A G +L SP KTW G I G + ++++
Sbjct: 127 GFTTIVFLFAVVWSTDIAAYFNGRALGGPKLAPRFSPNKTWSGAIGGAAAAVTGGLLVAS 186
Query: 333 IFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
+ P ++ L+ + GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 187 LVAAPGGWGVPVLALLLSIVSQI-GDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|Q92903|CDS1_HUMAN Phosphatidate cytidylyltransferase 1 OS=Homo sapiens GN=CDS1 PE=2
SV=2
Length = 461
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 55/184 (29%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTV----- 328
G++ L+ SS+I D A++ G FGRT L +SPKKTWEG I GG +T V
Sbjct: 238 GMIWFLVPISSVICNDITAYLFGFFFGRTPLIKLSPKKTWEGFI---GGFFSTVVFGFIA 294
Query: 329 --VLSKI------------------------------FCWPRYLPSAI------VFGF-- 348
VLSK + P +L + + ++ F
Sbjct: 295 AYVLSKYQYFVCPVEYRSDVNSFVTECEPSELFQLQTYSLPPFLKAVLRQERVSLYPFQI 354
Query: 349 ----LNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFV 401
L+ F S+ FG S KR +KD + IPGHGGI+DR D + ++
Sbjct: 355 HSIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYI 414
Query: 402 KTFL 405
+F+
Sbjct: 415 TSFI 418
>sp|P98191|CDS1_MOUSE Phosphatidate cytidylyltransferase 1 OS=Mus musculus GN=Cds1 PE=2
SV=2
Length = 461
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 55/184 (29%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTV----- 328
G++ L+ SS+I D A++ G FGRT L +SPKKTWEG I GG +T +
Sbjct: 238 GMIWFLVPISSVICNDITAYLFGFFFGRTPLIKLSPKKTWEGFI---GGFFSTVIFGFIA 294
Query: 329 --VLSKI------------------------------FCWPRYLPSAI------VFGF-- 348
VLSK + P +L + + ++ F
Sbjct: 295 AYVLSKYQYFVCPVEYRSDVNSFVTECEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQI 354
Query: 349 ----LNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFV 401
L+ F S+ FG S KR +KD + IPGHGGI+DR D + ++
Sbjct: 355 HSIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYI 414
Query: 402 KTFL 405
+F+
Sbjct: 415 TSFI 418
>sp|O35052|CDS1_RAT Phosphatidate cytidylyltransferase 1 OS=Rattus norvegicus GN=Cds1
PE=1 SV=2
Length = 461
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 55/184 (29%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTV----- 328
G++ L+ SS+I D A++ G FGRT L +SPKKTWEG I GG +T +
Sbjct: 238 GMIWFLVPISSVICNDITAYLFGFFFGRTPLIKLSPKKTWEGFI---GGFFSTVIFGFIA 294
Query: 329 --VLSKI------------------------------FCWPRYLPSAI------VFGF-- 348
VLSK + P +L + + ++ F
Sbjct: 295 AYVLSKYQYFVCPVEYRSDVNSFVTECEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQI 354
Query: 349 ----LNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFV 401
L+ F S+ FG S KR +KD + IPGHGGI+DR D + ++
Sbjct: 355 HSIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYI 414
Query: 402 KTFL 405
+F+
Sbjct: 415 TSFI 418
>sp|Q8G0E0|CDSA_BRUSU Phosphatidate cytidylyltransferase OS=Brucella suis biovar 1
(strain 1330) GN=cdsA PE=3 SV=1
Length = 270
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSK 332
G + F+ + + D A+ G+A G +L SP KTW G I G +A ++++
Sbjct: 127 GFTTIVFLFAVVWSTDIAAYFNGRALGGPKLAPRFSPNKTWSGAIGGAAAAVAGGLLVAS 186
Query: 333 IFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
+ P ++ L+ + GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 187 LVAAPGGWGVPVLALLLSIVSQI-GDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|P0C102|CDSA_BRUAB Phosphatidate cytidylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=cdsA PE=3 SV=1
Length = 270
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSK 332
G + F+ + + D A+ G+A G +L SP KTW G I G +A ++++
Sbjct: 127 GFTTIVFLFAVVWSTDITAYFNGRALGGPKLAPRFSPNKTWSGAIGGAAAAVAGGLLVAS 186
Query: 333 IFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
+ P ++ L+ + GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 187 LVAAPGGWGVPVLALLLSIVSQI-GDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|Q2YRP9|CDSA_BRUA2 Phosphatidate cytidylyltransferase OS=Brucella abortus (strain
2308) GN=cdsA PE=3 SV=1
Length = 270
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSK 332
G + F+ + + D A+ G+A G +L SP KTW G I G +A ++++
Sbjct: 127 GFTTIVFLFAVVWSTDITAYFNGRALGGPKLAPRFSPNKTWSGAIGGAAAAVAGGLLVAS 186
Query: 333 IFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 388
+ P ++ L+ + GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 187 LVAAPGGWGVPVLALLLSIVSQI-GDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC13A2.03 PE=1 SV=1
Length = 439
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 79/201 (39%), Gaps = 61/201 (30%)
Query: 263 ILLGGLPHWTV-----GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTI 317
+L+ G H+ + GL + ++ D FA++ GK FG+ L +SPKKT EG
Sbjct: 188 LLVVGQSHFMINNLFEGLFWFFVPVCYVVCNDVFAYLCGKMFGKHPLIQVSPKKTVEGF- 246
Query: 318 VGLGGCIATTVV-------------------------LSKIFCWPR-------------- 338
LGG I T V+ S + C P
Sbjct: 247 --LGGWICTVVIGSLISYVLMHFKYFICPTRDLSTSAFSGLNCTPNSVFLPHTYTIPAVF 304
Query: 339 ----YLPSAIVFGFLNF-------FGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGIL 384
LP I + F F S+ FG S +KR +KD G+ IPGHGG+
Sbjct: 305 VDTFRLPETITLAPIYFHLAIFATFSSLIAPFGGFFASGLKRAFKIKDFGASIPGHGGLT 364
Query: 385 DRVDSYIFTGALAYSFVKTFL 405
DR+D G Y + ++F+
Sbjct: 365 DRMDCQFLNGVFVYMYFQSFI 385
>sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens GN=CDS2 PE=1
SV=1
Length = 445
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 70/181 (38%), Gaps = 49/181 (27%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI 333
G++ ++ S +I D A++ G FGRT L +SPKKTWEG I G + ++LS +
Sbjct: 221 GMIWFIVPISCVICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYV 280
Query: 334 F----------------------CWP------------------------RYLPSAIVFG 347
C P R P I
Sbjct: 281 MSGYRCFVCPVEYNNDTNSFTVDCEPSDLFRLQEYNIPGVIQSVIGWKTVRMYPFQIHSI 340
Query: 348 FLNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
L+ F S+ FG S KR +KD + IPGHGGI+DR D ++ +F
Sbjct: 341 ALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASF 400
Query: 405 L 405
+
Sbjct: 401 I 401
>sp|A0JNC1|CDS2_BOVIN Phosphatidate cytidylyltransferase 2 OS=Bos taurus GN=CDS2 PE=1
SV=1
Length = 445
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 70/181 (38%), Gaps = 49/181 (27%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI 333
G++ ++ S +I D A++ G FGRT L +SPKKTWEG I G + ++LS +
Sbjct: 221 GMIWFIVPISCVICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYV 280
Query: 334 F----------------------CWP------------------------RYLPSAIVFG 347
C P R P I
Sbjct: 281 MSGYRCFVCPVEYNNDTNSFTVDCEPSGLFRLQEYNIPGVIQSIIGWKTVRMYPFQIHSI 340
Query: 348 FLNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
L+ F S+ FG S KR +KD + IPGHGGI+DR D ++ +F
Sbjct: 341 ALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASF 400
Query: 405 L 405
+
Sbjct: 401 I 401
>sp|Q99L43|CDS2_MOUSE Phosphatidate cytidylyltransferase 2 OS=Mus musculus GN=Cds2 PE=1
SV=1
Length = 444
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 70/181 (38%), Gaps = 49/181 (27%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI 333
G++ ++ S +I D A++ G FGRT L +SPKKTWEG I G + ++LS +
Sbjct: 220 GMIWFIVPISCVICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYV 279
Query: 334 F----------------------CWP------------------------RYLPSAIVFG 347
C P R P I
Sbjct: 280 MSGYRCFVCPVEYNNDTNSFTVDCEPSDLFRLQEYNIPGVIQSAIGWKTVRMYPFQIHSI 339
Query: 348 FLNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 404
L+ F S+ FG S KR +KD + IPGHGGI+DR D ++ +F
Sbjct: 340 ALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASF 399
Query: 405 L 405
+
Sbjct: 400 I 400
>sp|O67292|CDSA_AQUAE Phosphatidate cytidylyltransferase OS=Aquifex aeolicus (strain VF5)
GN=cdsA PE=3 SV=1
Length = 259
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 289 DTFAFIGGKAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFG 347
D FA+ GK FG+T L ISPKKT EG LGG + ++ + P + ++ + G
Sbjct: 142 DVFAYYIGKNFGKTPLFPKISPKKTVEGF---LGGVLFGSLFFA--LTLPYGILNSFLLG 196
Query: 348 FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAY 398
V GD +S IKR G+KD ++ HGG DR D+ +F+ + Y
Sbjct: 197 TFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALVFSAPVFY 247
>sp|P53439|CDSA_CAEEL Probable phosphatidate cytidylyltransferase OS=Caenorhabditis
elegans GN=C33H5.18 PE=2 SV=1
Length = 455
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 50/182 (27%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLS-- 331
GL+ L + II D +++ G +G+T L +SPKKTWEG I G + ++LS
Sbjct: 237 GLIWFLAPVAMIICCDIMSYMFGFFWGKTPLIKLSPKKTWEGFIGGAFSTVVFGILLSLA 296
Query: 332 ---------------------------KIFCWPRYLPSAIVFGFL--------------- 349
++ +P P + V+ L
Sbjct: 297 LYNRPFFVCPVQHYQTDSSNCTIPLAFQLQDYPVPRPFSFVYKILRKEPIIQLCPFVFHS 356
Query: 350 ---NFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKT 403
+ F S+ FG S KR +KD G +IPGHGG++DR D + G ++ +
Sbjct: 357 IALSLFASILGPFGGFFASGFKRAFKIKDFGDVIPGHGGLMDRFDCQLLMGTFVMVYIHS 416
Query: 404 FL 405
F+
Sbjct: 417 FI 418
>sp|Q91XU8|CDS2_RAT Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2
PE=2 SV=1
Length = 443
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 48/180 (26%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI 333
G++ ++ S +I D A++ G FGRT L +SPKKTWEG I G + ++LS +
Sbjct: 220 GMIWFIVPISCVICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYV 279
Query: 334 F----------------------CWPRYL--------PSAI---------------VFGF 348
C P L P I +
Sbjct: 280 MSGYRCFVCPVEYNNDTNSFTVDCEPSDLFRLQEYNIPGVIQSLVGWKTMRMYPFQIHSA 339
Query: 349 LNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 405
L+ F S+ FG S KR +KD + IPGHGGI+DR D ++ +F+
Sbjct: 340 LSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI 399
>sp|Q55D90|CDSA_DICDI Probable phosphatidate cytidylyltransferase OS=Dictyostelium
discoideum GN=cdsA PE=3 SV=1
Length = 479
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 67/189 (35%), Gaps = 57/189 (30%)
Query: 274 GLVATLISFSSIIAADTFAFIGG----KAFGRTQLTSISPKKTWEGTIVGLG-------- 321
GL+ ++ S I+ D FA+ G K F L ISP KTWEG I G
Sbjct: 249 GLIWFILPVSIIVCNDIFAYFNGFFLGKKFINRPLMKISPNKTWEGFIGATGWTLLFAYY 308
Query: 322 ------------------------GCIATTVVLSKIFCWP------------------RY 339
C V L K F +P Y
Sbjct: 309 FCGFLLKYDWIVCPKGNTGFMESLHCTRDPVFLEKEFIFPPEITTIAFKYLGITLLPFTY 368
Query: 340 LPSAIVFGFLNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGAL 396
+P L FGS+ FG S IKR VKD ++ PGHGG+ DR D G
Sbjct: 369 IPIQFHALVLALFGSLIAPFGGFFASGIKRAYKVKDFDTIFPGHGGVTDRTDCQFIMGLF 428
Query: 397 AYSFVKTFL 405
+ + TF+
Sbjct: 429 IHVYYNTFI 437
>sp|Q49433|CDSA_MYCGE Putative phosphatidate cytidylyltransferase OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=cdsA PE=3 SV=1
Length = 305
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 60/146 (41%), Gaps = 45/146 (30%)
Query: 286 IAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY------ 339
++ DTF F+ GK FG+ L ISP KTWEG G+ I +L ++ P +
Sbjct: 118 VSVDTFPFLFGKRFGKNPLIKISPSKTWEGAFFGIISTIVVVALLCVLYSIPFFVAKPTF 177
Query: 340 -------------------LPSAIVFGFLN-----------------FFGSVF---GDLT 360
+ + + F++ F GSVF GDL
Sbjct: 178 NQTNGIALNTPQNYDSHNLITNIFLIAFISGGSSFYIYWWVSTLALIFTGSVFAIGGDLF 237
Query: 361 ESMIKRDAGVKDSGSLIPGHGGILDR 386
S IKR +KD ++ HGG+LDR
Sbjct: 238 FSYIKRLISIKDFSKVLGKHGGVLDR 263
>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum tuberosum GN=CDS1
PE=2 SV=1
Length = 424
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 46/178 (25%)
Query: 274 GLVATLISFSSIIAADTFAFIGGKAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI 333
G+ L+ S I+ D A+ G FGRT L +SPKKTWEG I I + +L+ +
Sbjct: 205 GIFWFLLPASLIVINDIAAYFFGFFFGRTPLIKLSPKKTWEGFIGASITTIISAFLLANM 264
Query: 334 F-------C--------W----------------PRYLPS---------------AIVFG 347
F C W P + P+ A++ G
Sbjct: 265 FGRFQWLTCPRKDLSTGWLDCDPGPLFKPEYFTLPEWFPAWFLSREIAVLPVQWHALLLG 324
Query: 348 FLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 405
+ FG S KR +KD G IPGHGG+ DR+D + AY + ++F+
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIYHQSFI 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,821,586
Number of Sequences: 539616
Number of extensions: 6194220
Number of successful extensions: 18439
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 18309
Number of HSP's gapped (non-prelim): 112
length of query: 410
length of database: 191,569,459
effective HSP length: 120
effective length of query: 290
effective length of database: 126,815,539
effective search space: 36776506310
effective search space used: 36776506310
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)