Query 015278
Match_columns 410
No_of_seqs 309 out of 1822
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 09:48:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015278.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015278hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 3.4E-31 1.2E-35 263.8 4.6 205 17-292 26-253 (329)
2 1bq0_A DNAJ, HSP40; chaperone, 99.9 2.6E-22 8.9E-27 167.7 5.9 75 18-92 2-76 (103)
3 2ctw_A DNAJ homolog subfamily 99.8 2.3E-21 7.8E-26 163.8 5.0 87 4-90 2-88 (109)
4 1hdj_A Human HSP40, HDJ-1; mol 99.8 2.8E-21 9.7E-26 152.9 5.2 73 18-91 2-74 (77)
5 2dn9_A DNAJ homolog subfamily 99.8 2.6E-21 8.8E-26 153.8 4.5 72 17-88 5-76 (79)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 7.5E-21 2.6E-25 152.1 5.4 74 16-89 6-80 (82)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 8.9E-21 3E-25 154.0 5.1 81 6-87 4-84 (88)
8 2yua_A Williams-beuren syndrom 99.8 1.3E-20 4.5E-25 156.3 5.4 77 9-85 7-83 (99)
9 2ctq_A DNAJ homolog subfamily 99.8 1.4E-20 4.9E-25 159.6 4.5 75 16-90 17-91 (112)
10 2ctp_A DNAJ homolog subfamily 99.8 2E-20 6.8E-25 148.4 4.2 71 17-88 5-75 (78)
11 2ctr_A DNAJ homolog subfamily 99.8 1.6E-20 5.5E-25 152.5 3.7 74 17-91 5-78 (88)
12 2och_A Hypothetical protein DN 99.8 3.3E-20 1.1E-24 145.4 4.3 67 17-86 6-72 (73)
13 2dmx_A DNAJ homolog subfamily 99.8 2.8E-20 9.6E-25 152.1 3.4 76 17-92 7-83 (92)
14 2lgw_A DNAJ homolog subfamily 99.8 3.3E-20 1.1E-24 154.2 2.9 73 19-91 2-75 (99)
15 1wjz_A 1700030A21RIK protein; 99.8 9.3E-20 3.2E-24 149.3 4.0 71 15-85 12-88 (94)
16 3apq_A DNAJ homolog subfamily 99.8 1E-19 3.5E-24 168.0 4.5 73 19-91 2-74 (210)
17 2o37_A Protein SIS1; HSP40, J- 99.8 1E-19 3.4E-24 149.1 2.5 73 17-92 6-78 (92)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 4.5E-19 1.5E-23 149.4 1.3 71 16-86 12-86 (109)
19 2ys8_A RAB-related GTP-binding 99.7 4.7E-18 1.6E-22 138.7 3.9 63 17-80 25-87 (90)
20 2l6l_A DNAJ homolog subfamily 99.7 6.1E-18 2.1E-22 150.9 4.3 69 17-85 8-82 (155)
21 1nlt_A Protein YDJ1, mitochond 99.7 7.5E-17 2.6E-21 154.6 10.4 155 117-293 10-184 (248)
22 1gh6_A Large T antigen; tumor 99.7 4.5E-18 1.6E-22 144.8 0.0 65 18-86 7-73 (114)
23 3hho_A CO-chaperone protein HS 99.6 3.2E-17 1.1E-21 149.3 2.7 67 18-84 3-76 (174)
24 1iur_A KIAA0730 protein; DNAJ 99.6 2E-17 6.9E-22 134.6 1.1 68 15-82 12-80 (88)
25 3bvo_A CO-chaperone protein HS 99.6 5.6E-17 1.9E-21 151.5 3.8 75 9-83 33-114 (207)
26 2pf4_E Small T antigen; PP2A, 99.6 1.6E-17 5.4E-22 151.0 -0.1 65 18-86 10-76 (174)
27 1n4c_A Auxilin; four helix bun 99.6 8E-17 2.7E-21 147.3 2.7 64 18-81 116-182 (182)
28 1fpo_A HSC20, chaperone protei 99.6 6.9E-17 2.4E-21 146.7 1.9 66 20-85 2-74 (171)
29 1faf_A Large T antigen; J doma 99.6 8.6E-17 2.9E-21 128.2 2.0 65 18-87 10-76 (79)
30 3apo_A DNAJ homolog subfamily 99.6 2.5E-17 8.5E-22 179.4 -1.6 78 15-92 17-94 (780)
31 2qwo_B Putative tyrosine-prote 99.6 8.3E-17 2.8E-21 131.9 1.6 56 19-74 33-91 (92)
32 3ag7_A Putative uncharacterize 99.6 3.2E-16 1.1E-20 131.7 1.7 60 17-77 39-105 (106)
33 3uo3_A J-type CO-chaperone JAC 99.6 7.7E-16 2.6E-20 141.0 3.7 68 15-85 7-81 (181)
34 2guz_A Mitochondrial import in 99.5 2.7E-15 9.2E-20 117.0 1.8 58 18-79 13-71 (71)
35 2y4t_A DNAJ homolog subfamily 99.0 1.5E-10 5E-15 114.1 4.4 66 18-83 381-449 (450)
36 3agx_A DNAJ homolog subfamily 98.9 2E-09 6.7E-14 98.3 7.2 64 220-292 44-114 (181)
37 2q2g_A HSP40 protein, heat sho 98.9 2.1E-09 7.1E-14 98.0 5.9 64 220-292 43-114 (180)
38 1c3g_A Heat shock protein 40; 98.6 3.6E-08 1.2E-12 89.0 5.7 65 220-293 37-109 (170)
39 2guz_B Mitochondrial import in 98.4 1.1E-07 3.9E-12 72.7 3.6 50 20-73 5-57 (65)
40 2ctt_A DNAJ homolog subfamily 97.3 6.2E-05 2.1E-09 62.2 1.0 84 120-217 3-97 (104)
41 3i38_A Putative chaperone DNAJ 94.7 0.0045 1.5E-07 51.6 -0.6 30 263-292 2-33 (109)
42 1xao_A YDJ1, mitochondrial pro 92.3 0.022 7.6E-07 48.1 -0.3 28 266-293 1-29 (121)
43 2pzi_A Probable serine/threoni 87.2 0.27 9.3E-06 52.2 2.9 49 15-71 625-675 (681)
44 1exk_A DNAJ protein; extended 82.0 1.5 5.2E-05 33.3 4.3 33 173-214 45-77 (79)
45 3htk_A Structural maintenance 75.1 20 0.00069 25.7 8.6 51 295-345 5-55 (60)
46 3lcz_A YCZA, inhibitor of trap 59.1 1.5 5.1E-05 31.6 -0.7 31 177-215 7-37 (53)
47 1l8d_A DNA double-strand break 54.8 20 0.0007 28.8 5.6 49 285-333 52-102 (112)
48 3hnw_A Uncharacterized protein 48.8 70 0.0024 27.2 8.2 62 284-345 60-125 (138)
49 3na7_A HP0958; flagellar bioge 47.3 68 0.0023 29.7 8.6 53 298-350 114-170 (256)
50 3oja_B Anopheles plasmodium-re 43.8 79 0.0027 32.3 9.3 52 311-362 539-590 (597)
51 3a7p_A Autophagy protein 16; c 43.6 96 0.0033 27.0 8.2 51 294-344 81-131 (152)
52 2eqb_B RAB guanine nucleotide 42.3 1.2E+02 0.004 24.4 7.9 50 294-343 11-60 (97)
53 1fxk_C Protein (prefoldin); ar 41.7 21 0.00072 29.7 3.7 20 262-281 68-87 (133)
54 3mov_A Lamin-B1; LMNB1, B-type 40.6 33 0.0011 27.5 4.5 59 297-355 14-72 (95)
55 1wt6_A Myotonin-protein kinase 36.6 1.4E+02 0.0049 23.1 7.3 44 299-342 28-71 (81)
56 3bas_A Myosin heavy chain, str 34.5 1.3E+02 0.0046 23.3 7.2 43 300-342 12-54 (89)
57 2k48_A Nucleoprotein; viral pr 34.4 1.7E+02 0.006 23.8 7.8 55 294-348 41-103 (107)
58 4ani_A Protein GRPE; chaperone 31.9 1.1E+02 0.0039 27.9 7.2 61 295-355 59-128 (213)
59 3oa7_A Head morphogenesis prot 31.7 51 0.0017 29.9 4.6 53 294-346 15-67 (206)
60 3hnw_A Uncharacterized protein 31.3 1.6E+02 0.0055 24.9 7.7 50 294-343 81-130 (138)
61 1gk4_A Vimentin; intermediate 31.0 1.8E+02 0.0061 22.3 8.3 57 300-356 6-62 (84)
62 3iox_A AGI/II, PA; alpha helix 30.9 1.3E+02 0.0043 31.1 7.9 48 297-344 36-83 (497)
63 3iox_A AGI/II, PA; alpha helix 28.8 2.2E+02 0.0077 29.2 9.4 25 321-345 81-105 (497)
64 2bx9_A Anti-trap, AT, tryptoph 26.8 26 0.0009 25.0 1.5 20 195-214 17-36 (53)
65 2zdi_C Prefoldin subunit alpha 24.8 51 0.0017 28.1 3.3 20 262-281 78-97 (151)
66 4etp_A Kinesin-like protein KA 24.3 2E+02 0.0068 28.6 8.1 46 296-341 4-49 (403)
67 1fxk_C Protein (prefoldin); ar 23.8 2.9E+02 0.01 22.4 8.7 69 268-336 54-129 (133)
68 3swy_A Cyclic nucleotide-gated 23.6 1.9E+02 0.0064 20.0 6.5 38 294-331 4-41 (46)
69 4e61_A Protein BIM1; EB1-like 23.5 2.4E+02 0.0082 23.0 6.9 27 325-351 20-46 (106)
70 3p8d_A Medulloblastoma antigen 22.8 63 0.0021 24.2 3.0 21 261-281 8-28 (67)
71 1x8y_A Lamin A/C; structural p 22.3 1.8E+02 0.0063 22.4 5.9 21 300-320 40-60 (86)
72 2avr_X Adhesion A; antiparalle 21.8 1.8E+02 0.0062 24.2 5.9 37 313-349 68-104 (119)
73 3qii_A PHD finger protein 20; 21.4 55 0.0019 25.7 2.6 24 258-281 20-43 (85)
74 3aco_A Pacsin2, protein kinase 20.5 2.8E+02 0.0095 26.4 8.1 48 295-342 192-239 (350)
75 3na7_A HP0958; flagellar bioge 20.3 4.4E+02 0.015 24.0 9.2 10 308-317 31-40 (256)
76 2yy0_A C-MYC-binding protein; 20.2 1.3E+02 0.0046 21.2 4.2 27 307-333 24-50 (53)
77 2rq6_A ATP synthase epsilon ch 20.2 2.7E+02 0.0093 23.2 7.0 39 294-334 93-131 (138)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.96 E-value=3.4e-31 Score=263.82 Aligned_cols=205 Identities=23% Similarity=0.318 Sum_probs=64.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccccccc-hh
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESES-QE 95 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~~-~~ 95 (410)
..+|||+||||+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|+.||.++......+. ..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~ 104 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQ 104 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccc
Confidence 4579999999999999999999999999999999998 458899999999999999999999999998543211110 00
Q ss_pred hh---hccccchhHHHHHHHHhccC-----------CcceeeeechhHHHHHhCCceeeeeccccccccccccccccccc
Q 015278 96 LE---LDLSSLGAVNTMFAALFSKL-----------GVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFY 161 (410)
Q Consensus 96 ~~---~d~s~~g~~~~iF~~fFg~~-----------G~~i~ttVs~t~LEea~nG~~~~~~L~~g~~vC~kcegq~a~~y 161 (410)
+. ..+ +.+++.++|+.|||+. |.++...+.++ |+++++|+.+...+.. .+
T Consensus 105 ~~~~~~~f-~~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vs-leea~~G~~k~i~i~~--~v------------ 168 (329)
T 3lz8_A 105 RQTHEQSY-SQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVF-LEETLAEQTRTISYNL--PV------------ 168 (329)
T ss_dssp ---------------------------------CCCCCCEEEEECCC-TTGGGSCEEEEEEEEE--EE------------
T ss_pred cccccCCc-CCCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecc-hhhhhhccceEEEEEE--Ee------------
Confidence 00 001 1124678899999742 34555566665 6777776654333211 00
Q ss_pred ceeEeeeeccCCcEEEEeccCCCcceeeeeeccCCCcceeeeccccccCCceeeeceEEEeeeeeecCcccccccccCCC
Q 015278 162 SVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDP 241 (410)
Q Consensus 162 gv~i~~eqi~~G~v~qvqS~c~sKck~~~f~~~g~Gg~~~~~~eD~~k~gkvt~~~~~~L~~pv~~~~~g~~~~~~~kd~ 241 (410)
.| +.|. ++......|.|.| .+| +.+|
T Consensus 169 -------------------~~------------g~G~--------------v~~~~~~~l~V~I---P~G------v~~G 194 (329)
T 3lz8_A 169 -------------------YN------------VFGM--------------IESETPKTLNVKI---PAG------VVDG 194 (329)
T ss_dssp -------------------CC------------SCC---------------CCEEEEEEEEEEE---CTT------CCTT
T ss_pred -------------------ec------------CCeE--------------EEEecceEEEEeC---CCC------CCCC
Confidence 01 1231 1111112344444 555 5555
Q ss_pred CccccCC-----CCCCCccce-EEEeccce-eEEEeCCceeEeeeee-EEEeecCCchh
Q 015278 242 DAAFFKK-----LDGFQPCEI-TELKAGTH-VFAVYGDNFFKSASYM-IEALCAAPFTE 292 (410)
Q Consensus 242 ~~~~F~~-----l~g~~~~d~-~~l~~~~H-~F~r~Gdnl~~~~~is-~eaL~g~~~~~ 292 (410)
+++.|.. .+|..+||+ ++|++..| +|.|.|+||+++++|+ .|||+|+....
T Consensus 195 ~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V 253 (329)
T 3lz8_A 195 QRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTV 253 (329)
T ss_dssp CEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEE
T ss_pred CEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEE
Confidence 5554441 356789999 99999999 9999999999999999 99999987654
No 2
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.86 E-value=2.6e-22 Score=167.74 Aligned_cols=75 Identities=44% Similarity=0.815 Sum_probs=70.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESE 92 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~ 92 (410)
..|||+||||+++||.++||+|||+|+++||||++++++++.++|+.|++||+||+||.+|..||.+|.+++...
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 76 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQG 76 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhccc
Confidence 479999999999999999999999999999999999878899999999999999999999999999998876643
No 3
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=2.3e-21 Score=163.78 Aligned_cols=87 Identities=43% Similarity=0.647 Sum_probs=78.2
Q ss_pred ccccccccccCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccc
Q 015278 4 QRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDT 83 (410)
Q Consensus 4 ~~~~~~~~~~~~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~ 83 (410)
++..+...........|||+||||+++|+.+|||+|||+|+++||||++++++++.++|+.|++||+||+||.+|..||.
T Consensus 2 ~~g~s~~~r~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~ 81 (109)
T 2ctw_A 2 SSGSSGRQRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDK 81 (109)
T ss_dssp CCSSCCCCCCTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCCcccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 45566666666677889999999999999999999999999999999999888999999999999999999999999999
Q ss_pred ccccccc
Q 015278 84 AGFEAVE 90 (410)
Q Consensus 84 ~g~~~~~ 90 (410)
+|..++.
T Consensus 82 ~g~~~~~ 88 (109)
T 2ctw_A 82 YGSLGLY 88 (109)
T ss_dssp TCHHHHH
T ss_pred hcccccc
Confidence 9876543
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.83 E-value=2.8e-21 Score=152.92 Aligned_cols=73 Identities=48% Similarity=0.862 Sum_probs=68.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVES 91 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~ 91 (410)
..|||+||||+++||.++||+|||+|+++||||+++ ++.+.+.|+.|++||++|+||.+|..||.+|.+++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 369999999999999999999999999999999997 4678999999999999999999999999999877654
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=2.6e-21 Score=153.80 Aligned_cols=72 Identities=46% Similarity=0.766 Sum_probs=68.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 88 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~ 88 (410)
...|||+||||+++|+..+||+|||+|+++||||++++++.+.++|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 467999999999999999999999999999999999988889999999999999999999999999988654
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=7.5e-21 Score=152.13 Aligned_cols=74 Identities=46% Similarity=0.669 Sum_probs=67.8
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc-hhhHhHHhHHhhhhccCCccccccccccccccc
Q 015278 16 QLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP-VAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 89 (410)
Q Consensus 16 ~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~-~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~ 89 (410)
....|||+||||+++|+.++||+|||+|+++||||++++++ .+.++|+.|++||+||+||.+|..||.+|..++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 34689999999999999999999999999999999998664 578899999999999999999999999987654
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=8.9e-21 Score=154.04 Aligned_cols=81 Identities=44% Similarity=0.703 Sum_probs=71.4
Q ss_pred ccccccccCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccc
Q 015278 6 SKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 85 (410)
Q Consensus 6 ~~~~~~~~~~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g 85 (410)
+.+...........|||+||||+++|+.++||+|||+|+++||||+++ ++.+.+.|+.|++||++|+||.+|..||.+|
T Consensus 4 ~~~~~~~~~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 82 (88)
T 2cug_A 4 GSSGILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNYDHYG 82 (88)
T ss_dssp CCCCCCCCCCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred chhhHhhhhccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 334444455556789999999999999999999999999999999998 4678999999999999999999999999988
Q ss_pred cc
Q 015278 86 FE 87 (410)
Q Consensus 86 ~~ 87 (410)
..
T Consensus 83 ~~ 84 (88)
T 2cug_A 83 SG 84 (88)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 8
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.3e-20 Score=156.33 Aligned_cols=77 Identities=31% Similarity=0.546 Sum_probs=69.9
Q ss_pred cccccCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccc
Q 015278 9 ERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 85 (410)
Q Consensus 9 ~~~~~~~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g 85 (410)
....+......|||+||||+++|+.++||+|||+|+++||||++++++.+.++|+.|++||+||+||.+|..||...
T Consensus 7 ~~~~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 7 GSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CCCCCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 33444555678999999999999999999999999999999999988899999999999999999999999999843
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.4e-20 Score=159.58 Aligned_cols=75 Identities=25% Similarity=0.466 Sum_probs=69.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccccc
Q 015278 16 QLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVE 90 (410)
Q Consensus 16 ~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~ 90 (410)
....|||+||||+++|+.++||+|||+|+++||||++++++.|.++|+.|++||+||+||.+|..||.+|..++.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 446899999999999999999999999999999999998889999999999999999999999999998876543
No 10
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=2e-20 Score=148.39 Aligned_cols=71 Identities=49% Similarity=0.877 Sum_probs=66.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 88 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~ 88 (410)
...|||+||||+++|+..+||+|||+|+++||||+++ .+.+.+.|+.|++||+||+||.+|..||..|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4579999999999999999999999999999999997 4788999999999999999999999999988654
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.6e-20 Score=152.50 Aligned_cols=74 Identities=42% Similarity=0.783 Sum_probs=68.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVES 91 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~ 91 (410)
...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|+.|++||++|+||.+|..||..|..++..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 78 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS 78 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence 4579999999999999999999999999999999998 6789999999999999999999999999998766553
No 12
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.79 E-value=3.3e-20 Score=145.36 Aligned_cols=67 Identities=49% Similarity=0.848 Sum_probs=62.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~ 86 (410)
...|||+||||+++|+..+||+|||+|+++||||+++++ .+.|+.|++||+||+||.+|..||.+|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 357999999999999999999999999999999999743 5899999999999999999999999885
No 13
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2.8e-20 Score=152.13 Aligned_cols=76 Identities=43% Similarity=0.696 Sum_probs=69.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc-hhhHhHHhHHhhhhccCCcccccccccccccccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP-VAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESE 92 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~-~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~ 92 (410)
...|||+||||+++|+.++||+|||+|+++||||+++.++ .+.++|+.|++||+||+||.+|..||..|..++...
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 83 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG 83 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 4579999999999999999999999999999999998653 688999999999999999999999999998766543
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=3.3e-20 Score=154.17 Aligned_cols=73 Identities=44% Similarity=0.728 Sum_probs=65.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc-hhhHhHHhHHhhhhccCCccccccccccccccccc
Q 015278 19 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP-VAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVES 91 (410)
Q Consensus 19 ~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~-~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~ 91 (410)
.|||+||||+++||.+|||+|||+|+++||||+++++. .+.+.|+.|++||++|+||.+|..||..|.+++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 58999999999999999999999999999999998653 58899999999999999999999999998776654
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.77 E-value=9.3e-20 Score=149.33 Aligned_cols=71 Identities=30% Similarity=0.622 Sum_probs=65.0
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------chhhHhHHhHHhhhhccCCccccccccccc
Q 015278 15 KQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNAND------PVAADIFKEVTFSYNILSDPDKRRQYDTAG 85 (410)
Q Consensus 15 ~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~------~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g 85 (410)
.....|||+||||+++|+..|||+|||+|+++||||+++.+ +.+.++|+.|++||+||+||.+|+.||...
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 34578999999999999999999999999999999999854 458899999999999999999999999864
No 16
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=1e-19 Score=167.96 Aligned_cols=73 Identities=41% Similarity=0.750 Sum_probs=69.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccccc
Q 015278 19 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVES 91 (410)
Q Consensus 19 ~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~ 91 (410)
.|||+||||+++||.++||+|||+|+++||||+++++++|.++|+.|++||++|+||.+|+.||.+|..++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999988899999999999999999999999999999877654
No 17
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1e-19 Score=149.08 Aligned_cols=73 Identities=48% Similarity=0.813 Sum_probs=66.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESE 92 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~ 92 (410)
...|||+||||+++|+.++||+|||+|+++||||+++++ .++|+.|++||+||+||.+|..||.+|.+++...
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 357999999999999999999999999999999999754 4699999999999999999999999998776543
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.73 E-value=4.5e-19 Score=149.44 Aligned_cols=71 Identities=31% Similarity=0.454 Sum_probs=65.5
Q ss_pred CCCCCcccccCCCCCC-CHHHHHHHHHHHHHhcCCCCCCC---CchhhHhHHhHHhhhhccCCcccccccccccc
Q 015278 16 QLRRDPYEVLGVSRNC-TDQEIKSAYRKMALKYHPDKNAN---DPVAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (410)
Q Consensus 16 ~~~~d~Y~vLgv~~~A-s~~eIK~aYrklal~~HPDkn~~---~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~ 86 (410)
....|||+||||+++| |.+|||+|||+|+++||||++++ .+.+.+.|+.|++||+||+||.+|..||..|.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3468999999999999 99999999999999999999985 35688999999999999999999999999764
No 19
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=4.7e-18 Score=138.67 Aligned_cols=63 Identities=33% Similarity=0.517 Sum_probs=58.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQ 80 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~ 80 (410)
...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|+.|++||++|+||.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCcccccC
Confidence 3589999999999999999999999999999999998 46789999999999999999999875
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=6.1e-18 Score=150.93 Aligned_cols=69 Identities=30% Similarity=0.614 Sum_probs=63.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc------hhhHhHHhHHhhhhccCCccccccccccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP------VAADIFKEVTFSYNILSDPDKRRQYDTAG 85 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~------~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g 85 (410)
...|||+||||+++|+.++||+|||+|+++||||++++++ .|.+.|+.|++||+||+||.+|+.||..+
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4579999999999999999999999999999999998664 36789999999999999999999999855
No 21
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.68 E-value=7.5e-17 Score=154.56 Aligned_cols=155 Identities=21% Similarity=0.277 Sum_probs=120.1
Q ss_pred CCcceeeeechhHHHHHhCCceeeeeccccccccccccccc-----------ccccceeEeeeeccCCcEEEEeccCCCc
Q 015278 117 LGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQC-----------AHFYSVTITEEEARAGFVCRVQSSDKSK 185 (410)
Q Consensus 117 ~G~~i~ttVs~t~LEea~nG~~~~~~L~~g~~vC~kcegq~-----------a~~ygv~i~~eqi~~G~v~qvqS~c~sK 185 (410)
.|.++...+.++ |+|+|+|..+...+.. ...|..|.+++ |++.|..+..+++++ |+++++++|..
T Consensus 10 ~g~d~~~~l~vs-lee~~~G~~k~i~~~r-~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~- 85 (248)
T 1nlt_A 10 RGKDIKHEISAS-LEELYKGRTAKLALNK-QILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV- 85 (248)
T ss_dssp BCCCEEEEEEEC-TTHHHHCEEEEEEEEE-EEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT-
T ss_pred CCCCEEEEEEec-HHHhcCCceEEEEeeE-EEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC-
Confidence 466778888888 9999999988777654 56788888775 344555556667766 88899999977
Q ss_pred ceeeeeeccCCCcce--eeeccccccCCceeeeceEEEeeeeeecCcccccccccCCCCccccC----CCCCCCccce-E
Q 015278 186 FKLLYFDREGTGGLS--LALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFK----KLDGFQPCEI-T 258 (410)
Q Consensus 186 ck~~~f~~~g~Gg~~--~~~~eD~~k~gkvt~~~~~~L~~pv~~~~~g~~~~~~~kd~~~~~F~----~l~g~~~~d~-~ 258 (410)
|. |.|.++ ...|..|.+.|.+.... .|.|.| .+| +.+|+.+.|. ..++..|||+ +
T Consensus 86 C~-------G~G~~i~~~~~C~~C~G~g~~~~~~--~l~V~I---p~G------~~~G~~ir~~g~G~~~~~g~~GDl~v 147 (248)
T 1nlt_A 86 CH-------GTGDIIDPKDRCKSCNGKKVENERK--ILEVHV---EPG------MKDGQRIVFKGEADQAPDVIPGDVVF 147 (248)
T ss_dssp CS-------SSSSCCCTTSBCSSSTTSCEEEEEE--EEEEEE---CTT------CCTTCEEEETTCSCCCTTCBCCCEEE
T ss_pred CC-------CcCEEeccCCCCcccCCCceEeeeE--EEEEEE---CCC------ccCCCEEEEeeeecCCCCCCcceEEE
Confidence 99 999766 67788888888776665 455555 555 5566666444 1245589999 9
Q ss_pred EEeccce-eEEEeCCceeEeeeee-EEEeecCCchhh
Q 015278 259 ELKAGTH-VFAVYGDNFFKSASYM-IEALCAAPFTEE 293 (410)
Q Consensus 259 ~l~~~~H-~F~r~Gdnl~~~~~is-~eaL~g~~~~~~ 293 (410)
+|.+..| +|.|.||||+++++|+ .+||+|+.....
T Consensus 148 ~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~ 184 (248)
T 1nlt_A 148 IVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALE 184 (248)
T ss_dssp EEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEE
T ss_pred EEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEe
Confidence 9999999 9999999999999999 999999977653
No 22
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.67 E-value=4.5e-18 Score=144.79 Aligned_cols=65 Identities=23% Similarity=0.360 Sum_probs=60.8
Q ss_pred CCCcccccCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccc
Q 015278 18 RRDPYEVLGVSRNCTD--QEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~--~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~ 86 (410)
..|||+||||+++|+. .+||+|||+||++||||++++ .++|+.|++||+||+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 999999999999999999874 4799999999999999999999998774
No 23
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.64 E-value=3.2e-17 Score=149.31 Aligned_cols=67 Identities=22% Similarity=0.428 Sum_probs=61.9
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCCch-----hhHhHHhHHhhhhccCCcccccccccc
Q 015278 18 RRDPYEVLGVSRNCT--DQEIKSAYRKMALKYHPDKNANDPV-----AADIFKEVTFSYNILSDPDKRRQYDTA 84 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As--~~eIK~aYrklal~~HPDkn~~~~~-----a~~~f~~i~~Ay~vLsdp~kR~~YD~~ 84 (410)
..|||+||||+++++ ..+||+|||+|+++||||++++.+. |.+.|+.|++||+||+||.+|..||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 579999999999998 9999999999999999999987654 678999999999999999999999974
No 24
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.64 E-value=2e-17 Score=134.59 Aligned_cols=68 Identities=25% Similarity=0.378 Sum_probs=60.2
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc-hhhHhHHhHHhhhhccCCcccccccc
Q 015278 15 KQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP-VAADIFKEVTFSYNILSDPDKRRQYD 82 (410)
Q Consensus 15 ~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~-~a~~~f~~i~~Ay~vLsdp~kR~~YD 82 (410)
+....++|+||||+++||.+|||+|||+|+++||||+|++++ .|.++|+.|++||++|+|...|..+.
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~~ 80 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNA 80 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSSS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 334579999999999999999999999999999999999764 58899999999999999988874443
No 25
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.64 E-value=5.6e-17 Score=151.54 Aligned_cols=75 Identities=19% Similarity=0.252 Sum_probs=64.6
Q ss_pred cccccCCCCCCCcccccCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCCch-----hhHhHHhHHhhhhccCCccccccc
Q 015278 9 ERTDAGKQLRRDPYEVLGVSRN--CTDQEIKSAYRKMALKYHPDKNANDPV-----AADIFKEVTFSYNILSDPDKRRQY 81 (410)
Q Consensus 9 ~~~~~~~~~~~d~Y~vLgv~~~--As~~eIK~aYrklal~~HPDkn~~~~~-----a~~~f~~i~~Ay~vLsdp~kR~~Y 81 (410)
++.-..+....|||+||||+++ ++..+||+|||+|+++||||++++++. |.++|+.|++||+||+||.+|+.|
T Consensus 33 c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Y 112 (207)
T 3bvo_A 33 CRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLY 112 (207)
T ss_dssp TCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred ccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 3333444457899999999986 799999999999999999999987643 567899999999999999999999
Q ss_pred cc
Q 015278 82 DT 83 (410)
Q Consensus 82 D~ 83 (410)
|.
T Consensus 113 d~ 114 (207)
T 3bvo_A 113 LL 114 (207)
T ss_dssp HH
T ss_pred HH
Confidence 95
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.64 E-value=1.6e-17 Score=151.02 Aligned_cols=65 Identities=23% Similarity=0.340 Sum_probs=58.1
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccc
Q 015278 18 RRDPYEVLGVSRNCT--DQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As--~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~ 86 (410)
..|||+||||+++|+ .+|||+|||+||+++|||++++ .++|+.|++||+||+||.+|+.||.+|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 469999999999999 6999999999999999999874 4799999999999999999999999985
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.62 E-value=8e-17 Score=147.30 Aligned_cols=64 Identities=27% Similarity=0.495 Sum_probs=60.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCch---hhHhHHhHHhhhhccCCccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPV---AADIFKEVTFSYNILSDPDKRRQY 81 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~---a~~~f~~i~~Ay~vLsdp~kR~~Y 81 (410)
..|||+||||+++||..+||+|||+|+++||||++++++. |.++|+.|++||+||+||.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999999987654 889999999999999999999988
No 28
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.62 E-value=6.9e-17 Score=146.73 Aligned_cols=66 Identities=21% Similarity=0.379 Sum_probs=61.2
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCCch-----hhHhHHhHHhhhhccCCccccccccccc
Q 015278 20 DPYEVLGVSRNC--TDQEIKSAYRKMALKYHPDKNANDPV-----AADIFKEVTFSYNILSDPDKRRQYDTAG 85 (410)
Q Consensus 20 d~Y~vLgv~~~A--s~~eIK~aYrklal~~HPDkn~~~~~-----a~~~f~~i~~Ay~vLsdp~kR~~YD~~g 85 (410)
|||+||||++++ |..+||+|||+|+++||||++++++. |.++|+.|++||+||+||.+|..||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 99999999999999999999987653 5679999999999999999999999853
No 29
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.61 E-value=8.6e-17 Score=128.20 Aligned_cols=65 Identities=18% Similarity=0.315 Sum_probs=57.9
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccc
Q 015278 18 RRDPYEVLGVSRN--CTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFE 87 (410)
Q Consensus 18 ~~d~Y~vLgv~~~--As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~ 87 (410)
..++|+||||+++ ||..+||+|||+||++||||++++ .++|+.|++||++|+||.+|..++ +|..
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~-~g~~ 76 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN-LGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC-CSSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh-cCCc
Confidence 4689999999999 999999999999999999999852 579999999999999999998854 5543
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.61 E-value=2.5e-17 Score=179.37 Aligned_cols=78 Identities=38% Similarity=0.698 Sum_probs=40.9
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccccccc
Q 015278 15 KQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESE 92 (410)
Q Consensus 15 ~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~ 92 (410)
.....|||+||||+++||.+|||+|||+||++||||+++++++|.++|+.|++||++|+||.+|+.||.+|.+++...
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 445689999999999999999999999999999999998888999999999999999999999999999998776543
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.61 E-value=8.3e-17 Score=131.88 Aligned_cols=56 Identities=27% Similarity=0.469 Sum_probs=52.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCch---hhHhHHhHHhhhhccCC
Q 015278 19 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPV---AADIFKEVTFSYNILSD 74 (410)
Q Consensus 19 ~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~---a~~~f~~i~~Ay~vLsd 74 (410)
.++|++|||+++||+.|||+|||++|++||||+|++++. |.++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999997653 78899999999999974
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.57 E-value=3.2e-16 Score=131.72 Aligned_cols=60 Identities=15% Similarity=0.229 Sum_probs=52.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---Cc----hhhHhHHhHHhhhhccCCccc
Q 015278 17 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNAN---DP----VAADIFKEVTFSYNILSDPDK 77 (410)
Q Consensus 17 ~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~---~~----~a~~~f~~i~~Ay~vLsdp~k 77 (410)
...|||+|||++. ||..+||+|||+||++||||||++ ++ .|.++|+.|++||+||+|+..
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~ 105 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP 105 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence 3579999999996 999999999999999999999874 11 368899999999999999863
No 33
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.57 E-value=7.7e-16 Score=141.04 Aligned_cols=68 Identities=21% Similarity=0.413 Sum_probs=61.2
Q ss_pred CCCCCCccccc------CCCC-CCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccc
Q 015278 15 KQLRRDPYEVL------GVSR-NCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 85 (410)
Q Consensus 15 ~~~~~d~Y~vL------gv~~-~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g 85 (410)
.....|||+|| |+++ +||..+||+|||+|+++||||++++ +.++|+.|++||+||+||.+|..||...
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 34568999999 4665 8999999999999999999999985 7889999999999999999999999843
No 34
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.7e-15 Score=117.04 Aligned_cols=58 Identities=19% Similarity=0.379 Sum_probs=52.3
Q ss_pred CCCcccccCCCC-CCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccc
Q 015278 18 RRDPYEVLGVSR-NCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRR 79 (410)
Q Consensus 18 ~~d~Y~vLgv~~-~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~ 79 (410)
..++|+||||++ +||.++||+|||+|+++||||++. + .+.|+.|++||++|+|+..|+
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhcC
Confidence 468999999999 799999999999999999999963 3 469999999999999988764
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.00 E-value=1.5e-10 Score=114.07 Aligned_cols=66 Identities=44% Similarity=0.795 Sum_probs=56.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc---hhhHhHHhHHhhhhccCCccccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP---VAADIFKEVTFSYNILSDPDKRRQYDT 83 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~---~a~~~f~~i~~Ay~vLsdp~kR~~YD~ 83 (410)
..++|.+||+.+.++..+|+++|+++++++|||+.+.++ .+.++|+.|.+||++|+||++|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 459999999999999999999999999999999998542 478899999999999999999999997
No 36
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.89 E-value=2e-09 Score=98.33 Aligned_cols=64 Identities=27% Similarity=0.342 Sum_probs=50.4
Q ss_pred EEeeeeeecCcccccccccCCCCccccCC----CCCCCccce-EEEeccce-eEEEeCCceeEeeeee-EEEeecCCchh
Q 015278 220 FLGFPVYRLDQTATSMAAAKDPDAAFFKK----LDGFQPCEI-TELKAGTH-VFAVYGDNFFKSASYM-IEALCAAPFTE 292 (410)
Q Consensus 220 ~L~~pv~~~~~g~~~~~~~kd~~~~~F~~----l~g~~~~d~-~~l~~~~H-~F~r~Gdnl~~~~~is-~eaL~g~~~~~ 292 (410)
.|.|.| .+| +.+|+++.|.. -++..|||+ ++|.+..| +|.|.|+||+++++|+ .+||+|+....
T Consensus 44 ~l~V~I---p~G------~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v 114 (181)
T 3agx_A 44 ILTIEV---KKG------WKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNV 114 (181)
T ss_dssp EEEEEE---CTT------CCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEE
T ss_pred EEEEEE---CCC------ccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCCCEEEe
Confidence 455555 556 66666665542 235689999 99999999 9999999999999999 99999987654
No 37
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.86 E-value=2.1e-09 Score=98.05 Aligned_cols=64 Identities=14% Similarity=0.170 Sum_probs=52.6
Q ss_pred EEeeeeeecCcccccccccCCCCccccCC-----CCCCCccce-EEEeccce-eEEEeCCceeEeeeee-EEEeecCCch
Q 015278 220 FLGFPVYRLDQTATSMAAAKDPDAAFFKK-----LDGFQPCEI-TELKAGTH-VFAVYGDNFFKSASYM-IEALCAAPFT 291 (410)
Q Consensus 220 ~L~~pv~~~~~g~~~~~~~kd~~~~~F~~-----l~g~~~~d~-~~l~~~~H-~F~r~Gdnl~~~~~is-~eaL~g~~~~ 291 (410)
.|.|.| .+| +.+|+++.|.. .+|..|||+ ++|.+..| +|.|.|+||+++++|+ .+||+|+...
T Consensus 43 ~l~V~I---p~G------~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~ 113 (180)
T 2q2g_A 43 IVEVEI---KPG------WKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCP 113 (180)
T ss_dssp EEEEEE---CTT------CCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEE
T ss_pred EEEEEE---CCC------CcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhCCCEEE
Confidence 455555 666 66777765552 567889999 99999999 9999999999999999 9999998765
Q ss_pred h
Q 015278 292 E 292 (410)
Q Consensus 292 ~ 292 (410)
.
T Consensus 114 v 114 (180)
T 2q2g_A 114 V 114 (180)
T ss_dssp E
T ss_pred e
Confidence 4
No 38
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.60 E-value=3.6e-08 Score=89.02 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=52.5
Q ss_pred EEeeeeeecCcccccccccCCCCccccC-----CCCCCCccce-EEEeccce-eEEEeCCceeEeeeee-EEEeecCCch
Q 015278 220 FLGFPVYRLDQTATSMAAAKDPDAAFFK-----KLDGFQPCEI-TELKAGTH-VFAVYGDNFFKSASYM-IEALCAAPFT 291 (410)
Q Consensus 220 ~L~~pv~~~~~g~~~~~~~kd~~~~~F~-----~l~g~~~~d~-~~l~~~~H-~F~r~Gdnl~~~~~is-~eaL~g~~~~ 291 (410)
.|.|.| .+| +.+|+++.|. ..+|..|||+ ++|....| .|.|.|+||+++++|+ .+||+|+...
T Consensus 37 ~l~V~I---p~G------~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~ 107 (170)
T 1c3g_A 37 QIDIQL---KPG------WKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKT 107 (170)
T ss_dssp EEEEEC---CTT------CCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCEEEE
T ss_pred EEEEEe---CCC------ccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCCeEE
Confidence 455555 666 6666666554 2567889999 99999999 9999999999999999 9999998775
Q ss_pred hh
Q 015278 292 EE 293 (410)
Q Consensus 292 ~~ 293 (410)
..
T Consensus 108 v~ 109 (170)
T 1c3g_A 108 IQ 109 (170)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 39
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.43 E-value=1.1e-07 Score=72.67 Aligned_cols=50 Identities=10% Similarity=0.141 Sum_probs=43.7
Q ss_pred CcccccCCCCC---CCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccC
Q 015278 20 DPYEVLGVSRN---CTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILS 73 (410)
Q Consensus 20 d~Y~vLgv~~~---As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLs 73 (410)
+-|.||||+++ ++.++|+++||+|...+|||+.. ....+..|++|+++|.
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG----S~yl~~ki~~Ake~l~ 57 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG----SFYLQSKVYRAAERLK 57 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC----CHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC----CHHHHHHHHHHHHHHH
Confidence 45789999999 99999999999999999999953 2466788999999885
No 40
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.25 E-value=6.2e-05 Score=62.19 Aligned_cols=84 Identities=12% Similarity=0.122 Sum_probs=55.0
Q ss_pred ceeeeechhHHHHHhCCceeeeecccccccccccccccc----------cccc-eeEeeeeccCCcEEEEeccCCCccee
Q 015278 120 PIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCA----------HFYS-VTITEEEARAGFVCRVQSSDKSKFKL 188 (410)
Q Consensus 120 ~i~ttVs~t~LEea~nG~~~~~~L~~g~~vC~kcegq~a----------~~yg-v~i~~eqi~~G~v~qvqS~c~sKck~ 188 (410)
++...+.++ |+|+|+|..+.+.++. ...|..|.+.++ .+.| ..+...+ |+++ ++++|.. |.
T Consensus 3 ~~~~~l~vs-lee~~~G~~~~i~~~~-~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~---G~~~-~~~~C~~-C~- 74 (104)
T 2ctt_A 3 SGSSGMELT-FNQAAKGVNKEFTVNI-MDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT---GPFV-MRSTCRR-CG- 74 (104)
T ss_dssp CCCCCCCCC-CSSCCSSSCTTCCSSC-CEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE---TTEE-EEEECSS-SS-
T ss_pred ceEEEEEEE-HHHHcCCCEEEEEeee-eeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe---CCEE-EEEECCc-CC-
Confidence 345556666 9999999987776654 567888887642 1222 1222222 5543 5678877 99
Q ss_pred eeeeccCCCcceeeeccccccCCceeeec
Q 015278 189 LYFDREGTGGLSLALQEDCTKTGKVTSAG 217 (410)
Q Consensus 189 ~~f~~~g~Gg~~~~~~eD~~k~gkvt~~~ 217 (410)
|.|.++...|..|.+.|.+....
T Consensus 75 ------G~G~~i~~~C~~C~G~G~v~~~k 97 (104)
T 2ctt_A 75 ------GRGSIIISPCVVCRGAGQAKQKK 97 (104)
T ss_dssp ------SSSEECSSCCSSSSSCSEECCCC
T ss_pred ------CcceECCCcCCCCCCeeEEEEEE
Confidence 88877767788888888765443
No 41
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=94.70 E-value=0.0045 Score=51.55 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=25.9
Q ss_pred cce-eEEEeCCceeEeeeee-EEEeecCCchh
Q 015278 263 GTH-VFAVYGDNFFKSASYM-IEALCAAPFTE 292 (410)
Q Consensus 263 ~~H-~F~r~Gdnl~~~~~is-~eaL~g~~~~~ 292 (410)
..| +|.|.|+||++.++|+ .|||||+....
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v 33 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTV 33 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEE
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEE
Confidence 468 9999999999999999 99999987654
No 42
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=92.30 E-value=0.022 Score=48.11 Aligned_cols=28 Identities=25% Similarity=0.367 Sum_probs=25.1
Q ss_pred eEEEeCCceeEeeeee-EEEeecCCchhh
Q 015278 266 VFAVYGDNFFKSASYM-IEALCAAPFTEE 293 (410)
Q Consensus 266 ~F~r~Gdnl~~~~~is-~eaL~g~~~~~~ 293 (410)
+|.|.|+||+++++|+ .+||||+.....
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~ 29 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALE 29 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEE
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEe
Confidence 4999999999999999 999999877553
No 43
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.19 E-value=0.27 Score=52.23 Aligned_cols=49 Identities=12% Similarity=0.209 Sum_probs=38.6
Q ss_pred CCCCCCcccccCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhc
Q 015278 15 KQLRRDPYEVLGVSRNCTD--QEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNI 71 (410)
Q Consensus 15 ~~~~~d~Y~vLgv~~~As~--~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~v 71 (410)
....+|||.+||++.++.. .+|++|||+||+..+++ .+++..|..|+.|
T Consensus 625 ~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 625 KDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp TSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred HccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 3456679999999766655 67999999999976554 4688889888876
No 44
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=81.97 E-value=1.5 Score=33.33 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=24.0
Q ss_pred CcEEEEeccCCCcceeeeeeccCCCcceeeeccccccCCcee
Q 015278 173 GFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVT 214 (410)
Q Consensus 173 G~v~qvqS~c~sKck~~~f~~~g~Gg~~~~~~eD~~k~gkvt 214 (410)
|+++ ++++|.. |. |.|.++...|..|.+.|.+.
T Consensus 45 g~~~-~~~~C~~-C~-------G~G~~~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 45 GFFA-VQQTCPH-CQ-------GRGTLIKDPCNKCHGHGRVE 77 (79)
T ss_dssp TTEE-EEEECTT-TT-------TSSEECSSBCGGGTTSSEEE
T ss_pred CCCE-EeeECcC-CC-------CccEECCCcCCCCCCeEEEe
Confidence 6654 6778877 99 88876666788787777653
No 45
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=75.09 E-value=20 Score=25.66 Aligned_cols=51 Identities=10% Similarity=0.107 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 295 ENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQ 345 (410)
Q Consensus 295 ~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~~ 345 (410)
+.+.+++..+.....+....+.+|.+++..+..+++.+..-+..|.++=.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~q 55 (60)
T 3htk_A 5 NTKKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQ 55 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777888888999999999999999999998888887444
No 46
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=59.13 E-value=1.5 Score=31.65 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=23.4
Q ss_pred EEeccCCCcceeeeeeccCCCcceeeeccccccCCceee
Q 015278 177 RVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTS 215 (410)
Q Consensus 177 qvqS~c~sKck~~~f~~~g~Gg~~~~~~eD~~k~gkvt~ 215 (410)
+++++|.. |. |.|.++...|..|.+.|.+..
T Consensus 7 q~~~~C~~-C~-------GsG~~i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 7 DLETTCPN-CN-------GSGREEPEPCPKCLGKGVILT 37 (53)
T ss_dssp HHEEECTT-TT-------TSCEETTEECTTTTTSSEEEC
T ss_pred ceeccCcC-Cc-------ccccCCCCcCCCCCCcEEEEE
Confidence 45668877 98 888777778888888886653
No 47
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=54.83 E-value=20 Score=28.78 Aligned_cols=49 Identities=16% Similarity=0.308 Sum_probs=29.8
Q ss_pred eecCCchhh--hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 015278 285 LCAAPFTEE--KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYA 333 (410)
Q Consensus 285 L~g~~~~~~--~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~ 333 (410)
+||.+...+ .+.|..++.++...+++|..++.+-.+......++..+|.
T Consensus 52 vCgs~l~~~~~~~~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~~ 102 (112)
T 1l8d_A 52 VCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIK 102 (112)
T ss_dssp TTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688877765 3446666666666666666666665555555555444444
No 48
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=48.80 E-value=70 Score=27.20 Aligned_cols=62 Identities=11% Similarity=0.144 Sum_probs=45.9
Q ss_pred EeecCCchhh----hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 284 ALCAAPFTEE----KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQ 345 (410)
Q Consensus 284 aL~g~~~~~~----~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~~ 345 (410)
.|++...+++ .+.+...+.++..+..||..++.|-.+++.+.+++...+++...++++|-.+
T Consensus 60 VLaALNiadEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~ 125 (138)
T 3hnw_A 60 DMMYLNIADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKN 125 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555565 4456678888888888888888888888888888888777777777777554
No 49
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=47.29 E-value=68 Score=29.69 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=23.2
Q ss_pred HHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q 015278 298 RAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEM----QAIDELLKQRNEIH 350 (410)
Q Consensus 298 ~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~----~~~~~ll~~r~~~~ 350 (410)
.++...+..++.++...+.+..+..+.+.+..+.+.... .++..|.++|+++-
T Consensus 114 le~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~l~~~r~~l~ 170 (256)
T 3na7_A 114 ENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLV 170 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444444444444444444443333333332 23556667777543
No 50
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=43.82 E-value=79 Score=32.32 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=22.3
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 015278 311 LSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMKRS 362 (410)
Q Consensus 311 ~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~~r~~~~~~~~~~~~~~~~ 362 (410)
+.+++.|=.+..++.+++-.+..+.+++++.+-++-.+.-..+-..|.+.|-
T Consensus 539 ~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~~~~~~~~ 590 (597)
T 3oja_B 539 TEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNRNPDTRRV 590 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------
T ss_pred hhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 3333333334455555555555555555555555555555555555555443
No 51
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=43.62 E-value=96 Score=26.96 Aligned_cols=51 Identities=8% Similarity=0.147 Sum_probs=40.4
Q ss_pred hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 294 KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLK 344 (410)
Q Consensus 294 ~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~ 344 (410)
..+|++.+..|..|.+.+..++.||.....++..+-.|.....++=+.|+.
T Consensus 81 ~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~ 131 (152)
T 3a7p_A 81 EQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVA 131 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455777777777888888888889999999998888888877777666664
No 52
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=42.28 E-value=1.2e+02 Score=24.44 Aligned_cols=50 Identities=12% Similarity=0.223 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 294 KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELL 343 (410)
Q Consensus 294 ~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll 343 (410)
.+.|+..|.++.....|+.++..++.+..++-.++-....+-.+++.+|=
T Consensus 11 re~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLT 60 (97)
T 2eqb_B 11 KEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLT 60 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788888888888888888888888887777777666666555565553
No 53
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=41.65 E-value=21 Score=29.70 Aligned_cols=20 Identities=10% Similarity=0.139 Sum_probs=14.1
Q ss_pred ccceeEEEeCCceeEeeeee
Q 015278 262 AGTHVFAVYGDNFFKSASYM 281 (410)
Q Consensus 262 ~~~H~F~r~Gdnl~~~~~is 281 (410)
..++++.=-|.|+|...++.
T Consensus 68 ~~~~V~v~lG~g~~vE~~~~ 87 (133)
T 1fxk_C 68 DTSEVIMSVGAGVAIKKNFE 87 (133)
T ss_dssp STTEEEEEEETTEEEEEEHH
T ss_pred CCCEEEEEcCCCEEEEeeHH
Confidence 44556777788888777765
No 54
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=40.56 E-value=33 Score=27.45 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015278 297 LRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTT 355 (410)
Q Consensus 297 ~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~~r~~~~~~~~~ 355 (410)
|..++++...--+.|...+..|...+..+..+...++.+-+.+..=+...-.-|..+++
T Consensus 14 ~~~Lq~~~~~LE~~l~e~E~~~~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~Lln 72 (95)
T 3mov_A 14 YFQGQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLD 72 (95)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555555555555555555555555555555544444444544443
No 55
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=36.59 E-value=1.4e+02 Score=23.15 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=35.5
Q ss_pred HHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 299 AVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDEL 342 (410)
Q Consensus 299 ~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~l 342 (410)
.|=..|...|.....|+++-+++.++..+..........++.+|
T Consensus 28 ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eel 71 (81)
T 1wt6_A 28 SLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELL 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667777888889999999999999999988777777767664
No 56
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=34.52 E-value=1.3e+02 Score=23.31 Aligned_cols=43 Identities=12% Similarity=0.205 Sum_probs=16.9
Q ss_pred HHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 300 VEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDEL 342 (410)
Q Consensus 300 ~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~l 342 (410)
.|..|..+..++.+.+..+....+.-.++-.++.+..++.++|
T Consensus 12 ~eeEm~~~eeel~~lke~l~k~e~~rkele~~~~~l~~ek~~L 54 (89)
T 3bas_A 12 QEEEMKEQLKQMDKMKEDLAKTERIKKELEEQNVTLLEQKNDL 54 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444333333333333333333333333
No 57
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=34.43 E-value=1.7e+02 Score=23.76 Aligned_cols=55 Identities=18% Similarity=0.267 Sum_probs=40.1
Q ss_pred hhhHHHHHHHHHhhHHHHHhhHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 294 KENLRAVEAEILSKRAELSKFESEY--------REVLAQFTEMTSRYAQEMQAIDELLKQRNE 348 (410)
Q Consensus 294 ~~~~~~~e~~~~~k~~e~~~~~~ey--------~~~~~~~~~~~~~~~~~~~~~~~ll~~r~~ 348 (410)
.++|...|.||.+-|.-|.+-+.-| ..+..+=..+|+-|+..-.+++.+|+.+-.
T Consensus 41 Q~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~tl~~R~~~Vsalq~KiaeLKrqLAd~va 103 (107)
T 2k48_A 41 QENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLVA 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999988888887777666 345666677777788887777777776543
No 58
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=31.94 E-value=1.1e+02 Score=27.88 Aligned_cols=61 Identities=31% Similarity=0.444 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhhcc
Q 015278 295 ENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAI---------DELLKQRNEIHASYTT 355 (410)
Q Consensus 295 ~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~---------~~ll~~r~~~~~~~~~ 355 (410)
+.|...+++|...+.++..++..|+-+++.|+-.-.|..++.+.+ .+||---+.+-.++-.
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~ 128 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKI 128 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 557778888889999999999999999999999999998887654 4566555555444443
No 59
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=31.73 E-value=51 Score=29.92 Aligned_cols=53 Identities=13% Similarity=0.234 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 294 KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQR 346 (410)
Q Consensus 294 ~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~~r 346 (410)
.+++-+-|-.....-+-|.+++.||+.|...|.+.+........+.++|=+.=
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~s~~~dl~~s~~~l~ae~~~L~~~l 67 (206)
T 3oa7_A 15 LNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKSHNTLSKELDNLRSRF 67 (206)
T ss_dssp HHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 45555556566666777899999999999999999999988888887775443
No 60
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=31.30 E-value=1.6e+02 Score=24.88 Aligned_cols=50 Identities=16% Similarity=0.164 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 294 KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELL 343 (410)
Q Consensus 294 ~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll 343 (410)
...|.+.+..|...|+||...+-++.++.+..++...++......+..|=
T Consensus 81 ~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 81 SLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56688889999999999999999999999999999988888888887773
No 61
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=30.99 E-value=1.8e+02 Score=22.28 Aligned_cols=57 Identities=12% Similarity=0.197 Sum_probs=30.4
Q ss_pred HHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015278 300 VEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTA 356 (410)
Q Consensus 300 ~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~~r~~~~~~~~~~ 356 (410)
...+...--+.|...+..|...+..+......++.+-+.+..=+...-.-|..++++
T Consensus 6 l~~~~~sLE~~l~e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~Llnv 62 (84)
T 1gk4_A 6 LKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNV 62 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444555555555655566666666655555555555555544455555443
No 62
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=30.91 E-value=1.3e+02 Score=31.07 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 297 LRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLK 344 (410)
Q Consensus 297 ~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~ 344 (410)
+.+..++=..++.|...++...-++++.|++..++|.+.-.+.+.=++
T Consensus 36 ~ae~~a~n~~i~aeNeaikkrNa~aka~Ye~~l~kY~~dlakY~~~~A 83 (497)
T 3iox_A 36 VAANNAANAALTAENTAIKKRNADAKADYEAKLAKYQADLAKYQKDLA 83 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555566666666666666666655555555554444443
No 63
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=28.80 E-value=2.2e+02 Score=29.22 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 321 VLAQFTEMTSRYAQEMQAIDELLKQ 345 (410)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~ll~~ 345 (410)
.++.|+.-...|+++..++++.|++
T Consensus 81 ~~AeY~~kl~aYe~~~~~~~k~lae 105 (497)
T 3iox_A 81 DLADYPVKLKAYEDEQTSIKAALAE 105 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555554
No 64
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=26.81 E-value=26 Score=24.96 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=10.2
Q ss_pred CCCcceeeeccccccCCcee
Q 015278 195 GTGGLSLALQEDCTKTGKVT 214 (410)
Q Consensus 195 g~Gg~~~~~~eD~~k~gkvt 214 (410)
|.|......|.+|.+.|++.
T Consensus 17 GsG~~~~~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 17 RAGEIEGTPCPACSGKGVIL 36 (53)
T ss_dssp TSSEETTEECTTTTTSSEEE
T ss_pred ceeccCCCCCccCCCCccEE
Confidence 55543444555555555544
No 65
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=24.75 E-value=51 Score=28.06 Aligned_cols=20 Identities=10% Similarity=0.104 Sum_probs=13.9
Q ss_pred ccceeEEEeCCceeEeeeee
Q 015278 262 AGTHVFAVYGDNFFKSASYM 281 (410)
Q Consensus 262 ~~~H~F~r~Gdnl~~~~~is 281 (410)
..+|++.=-|.|+|...++.
T Consensus 78 ~~~~V~v~lG~g~~vE~~~~ 97 (151)
T 2zdi_C 78 DKNNAIVSVGSGYAVERSID 97 (151)
T ss_dssp CTTEEEEEEETTEEEEEEHH
T ss_pred CCCEEEEEeCCCeEEEecHH
Confidence 44556777788888777665
No 66
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=24.35 E-value=2e+02 Score=28.55 Aligned_cols=46 Identities=9% Similarity=0.213 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 296 NLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDE 341 (410)
Q Consensus 296 ~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ 341 (410)
+|...+.+|...+.++...+.+..+++....++.++|.++.+.-..
T Consensus 4 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~ 49 (403)
T 4etp_A 4 KIAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRT 49 (403)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666666666677777777766543333
No 67
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=23.79 E-value=2.9e+02 Score=22.40 Aligned_cols=69 Identities=10% Similarity=0.177 Sum_probs=42.9
Q ss_pred EEeCCceeEeeeee----EEEeecCCchhh---hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 015278 268 AVYGDNFFKSASYM----IEALCAAPFTEE---KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEM 336 (410)
Q Consensus 268 ~r~Gdnl~~~~~is----~eaL~g~~~~~~---~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~ 336 (410)
.=-|+++|..+.|. +-..-|..+-.| .+-+.-++..+..-...|.+++..-.....+++.+.....+.+
T Consensus 54 vplg~~~yv~a~i~~~~~V~v~lG~g~~vE~~~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~~ 129 (133)
T 1fxk_C 54 VPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELL 129 (133)
T ss_dssp EEEETTEEEEEECCSTTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCcEEEEEECCCCEEEEEcCCCEEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33478888888887 333355555444 3445556666666666666666666666666666666555544
No 68
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=23.56 E-value=1.9e+02 Score=20.05 Aligned_cols=38 Identities=11% Similarity=0.280 Sum_probs=24.3
Q ss_pred hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHH
Q 015278 294 KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSR 331 (410)
Q Consensus 294 ~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~ 331 (410)
.+++..+|..|..--.-+..+-.||..++.+-..=+.+
T Consensus 4 Eekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~ 41 (46)
T 3swy_A 4 EEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQ 41 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888877776666666666666666554443333
No 69
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=23.46 E-value=2.4e+02 Score=22.96 Aligned_cols=27 Identities=11% Similarity=0.081 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 325 FTEMTSRYAQEMQAIDELLKQRNEIHA 351 (410)
Q Consensus 325 ~~~~~~~~~~~~~~~~~ll~~r~~~~~ 351 (410)
-.++....+..+..++.|-++|+.-|.
T Consensus 20 i~~L~~ei~eLk~~ve~lEkERDFYF~ 46 (106)
T 4e61_A 20 IGSLNEEIEQYKGTVSTLEIEREFYFN 46 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555555566654443
No 70
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=22.78 E-value=63 Score=24.22 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=17.5
Q ss_pred eccceeEEEeCCceeEeeeee
Q 015278 261 KAGTHVFAVYGDNFFKSASYM 281 (410)
Q Consensus 261 ~~~~H~F~r~Gdnl~~~~~is 281 (410)
+.|+.+++|+||..++.+.|+
T Consensus 8 ~vGd~vmArW~D~~yYpA~I~ 28 (67)
T 3p8d_A 8 QINEQVLACWSDCRFYPAKVT 28 (67)
T ss_dssp CTTCEEEEECTTSCEEEEEEE
T ss_pred ccCCEEEEEcCCCCEeeEEEE
Confidence 345568899999999999988
No 71
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=22.29 E-value=1.8e+02 Score=22.36 Aligned_cols=21 Identities=33% Similarity=0.455 Sum_probs=9.1
Q ss_pred HHHHHHhhHHHHHhhHHHHHH
Q 015278 300 VEAEILSKRAELSKFESEYRE 320 (410)
Q Consensus 300 ~e~~~~~k~~e~~~~~~ey~~ 320 (410)
+|++|...|.+|..--.||.+
T Consensus 40 lE~el~~~r~e~~~ql~EYq~ 60 (86)
T 1x8y_A 40 KEREMAEMRARMQQQLDEYQE 60 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444433
No 72
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=21.79 E-value=1.8e+02 Score=24.19 Aligned_cols=37 Identities=16% Similarity=0.432 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 313 KFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEI 349 (410)
Q Consensus 313 ~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ll~~r~~~ 349 (410)
=|+.+|.+..++|.++...+..++..-.+.+..=+.|
T Consensus 68 ~yK~eY~~L~KkYk~~~~~Ld~eI~~qe~iI~nFe~I 104 (119)
T 2avr_X 68 FYKSQYQELASKYEDALKKLEAEMEQQKAVISDFEKI 104 (119)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3778888888888888888888877777666665555
No 73
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=21.42 E-value=55 Score=25.74 Aligned_cols=24 Identities=25% Similarity=0.382 Sum_probs=18.8
Q ss_pred EEEeccceeEEEeCCceeEeeeee
Q 015278 258 TELKAGTHVFAVYGDNFFKSASYM 281 (410)
Q Consensus 258 ~~l~~~~H~F~r~Gdnl~~~~~is 281 (410)
.....|+-+++|+||..|+.+.|+
T Consensus 20 ~~f~vGd~VlArW~D~~yYPAkI~ 43 (85)
T 3qii_A 20 SEFQINEQVLACWSDCRFYPAKVT 43 (85)
T ss_dssp -CCCTTCEEEEECTTSCEEEEEEE
T ss_pred cccccCCEEEEEeCCCCEeeEEEE
Confidence 445566778899999999999887
No 74
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=20.51 E-value=2.8e+02 Score=26.35 Aligned_cols=48 Identities=21% Similarity=0.393 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015278 295 ENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDEL 342 (410)
Q Consensus 295 ~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~l 342 (410)
..+..++.++...+.++.+-+.+|+.+...+.++..+|.+++..+-+.
T Consensus 192 k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~ 239 (350)
T 3aco_A 192 EQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQ 239 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556777888999999999999999999999999999998887765543
No 75
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=20.30 E-value=4.4e+02 Score=24.01 Aligned_cols=10 Identities=30% Similarity=0.441 Sum_probs=3.6
Q ss_pred HHHHHhhHHH
Q 015278 308 RAELSKFESE 317 (410)
Q Consensus 308 ~~e~~~~~~e 317 (410)
+.+|..++.+
T Consensus 31 p~el~~le~~ 40 (256)
T 3na7_A 31 RKDLDKALND 40 (256)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 76
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=20.25 E-value=1.3e+02 Score=21.25 Aligned_cols=27 Identities=19% Similarity=0.465 Sum_probs=17.7
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 015278 307 KRAELSKFESEYREVLAQFTEMTSRYA 333 (410)
Q Consensus 307 k~~e~~~~~~ey~~~~~~~~~~~~~~~ 333 (410)
-|.|+..++.+|.+.+++.++..+|+.
T Consensus 24 Lk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 24 LRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666677777766666666666654
No 77
>2rq6_A ATP synthase epsilon chain; F1FO ATP synthase, F1-ATPase, epsilon subunit, ATP synthesis, CF1, hydrogen ION transport, hydrolase; NMR {Thermosynechococcus elongatus} PDB: 2rq7_A
Probab=20.19 E-value=2.7e+02 Score=23.25 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=21.7
Q ss_pred hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 015278 294 KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQ 334 (410)
Q Consensus 294 ~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~~~~~ 334 (410)
.+.+...|..|...... .=..||.+|......+.+|+..
T Consensus 93 ~~a~~~Ae~~l~~~~~~--~~~~~~~~a~~aL~rA~arl~~ 131 (138)
T 2rq6_A 93 KAEFAAAQAALAQAEQG--ESKQAKIQATQAFRRARARLQA 131 (138)
T ss_dssp HHHHHHHHHHHHHHHHH--SCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 33355555555433210 0125688888888877777654
Done!