Query 015278
Match_columns 410
No_of_seqs 309 out of 1822
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 09:48:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015278.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015278hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xbla_ a.2.3.1 (A:) DnaJ chap 99.9 7.4E-24 5.4E-28 165.8 6.1 72 18-89 2-73 (75)
2 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 99.8 2.7E-22 1.9E-26 157.5 5.1 74 18-92 2-75 (77)
3 d1wjza_ a.2.3.1 (A:) CSL-type 99.8 1.3E-20 9.7E-25 153.2 4.1 71 15-85 12-88 (94)
4 d1gh6a_ a.2.3.1 (A:) Large T a 99.8 1.9E-20 1.4E-24 157.4 1.5 67 18-88 7-75 (114)
5 d1fpoa1 a.2.3.1 (A:1-76) HSC20 99.6 1.2E-17 8.8E-22 130.2 1.9 64 20-83 2-72 (76)
6 d1fafa_ a.2.3.1 (A:) Large T a 99.6 1.1E-17 8.4E-22 131.4 1.3 65 18-86 10-76 (79)
7 d1iura_ a.2.3.1 (A:) Hypotheti 99.6 4.4E-17 3.2E-21 130.6 1.9 66 18-86 15-81 (88)
8 d1nz6a_ a.2.3.1 (A:) Auxilin J 99.6 1.1E-16 8E-21 130.8 2.8 64 18-81 32-98 (98)
9 d1nlta2 b.4.1.1 (A:258-337) Mi 94.0 0.0053 3.9E-07 46.1 0.5 27 267-293 2-29 (80)
10 d1c3ga2 b.4.1.1 (A:260-349) He 93.0 0.0057 4.1E-07 47.1 -1.0 27 267-293 2-29 (90)
11 d1c3ga1 b.4.1.1 (A:180-259) He 91.8 0.059 4.3E-06 40.0 3.5 37 220-265 37-79 (80)
12 d1nlta3 g.54.1.1 (A:139-212) M 90.6 0.16 1.2E-05 37.2 4.9 41 162-211 28-70 (74)
13 d1nlta1 b.4.1.1 (A:110-138,A:2 82.9 0.7 5.1E-05 33.4 4.6 37 220-265 32-73 (74)
14 d1exka_ g.54.1.1 (A:) Cysteine 76.0 1 7.6E-05 32.9 3.5 34 172-214 44-77 (79)
15 d1k4ta1 a.2.8.1 (A:641-712) Eu 48.7 41 0.003 23.8 8.3 48 297-344 4-59 (72)
16 d1fxkc_ a.2.5.1 (C:) Prefoldin 33.7 59 0.0043 24.7 7.3 63 259-330 65-130 (133)
17 d1i11a_ a.21.1.1 (A:) Sox-5 {M 29.5 17 0.0013 25.0 2.9 42 37-83 14-55 (70)
18 d2e50a1 d.305.1.1 (A:1-222) Pr 27.2 95 0.0069 26.1 8.1 46 306-351 30-76 (222)
19 d2lefa_ a.21.1.1 (A:) Lymphoid 23.9 15 0.0011 26.4 1.8 43 37-84 14-56 (86)
No 1
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.88 E-value=7.4e-24 Score=165.77 Aligned_cols=72 Identities=44% Similarity=0.835 Sum_probs=68.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 89 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~ 89 (410)
.+|||+||||+++||.+|||+|||+|+++||||++++++.+.+.|..|++||+||+||.+|..||.+|..++
T Consensus 2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 73 (75)
T d1xbla_ 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (75)
T ss_dssp CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence 579999999999999999999999999999999999888899999999999999999999999999997654
No 2
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.7e-22 Score=157.50 Aligned_cols=74 Identities=47% Similarity=0.851 Sum_probs=69.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESE 92 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~~~~~ 92 (410)
.+|||+||||+++||.++|++||+++++++|||+++ ++++.++|..|++||+||+||.+|+.||.+|.+++.+.
T Consensus 2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g~ 75 (77)
T d1hdja_ 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSS
T ss_pred CCChHHHcCCCCCcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcCC
Confidence 479999999999999999999999999999999997 57788999999999999999999999999998877544
No 3
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.3e-20 Score=153.25 Aligned_cols=71 Identities=30% Similarity=0.622 Sum_probs=64.2
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------chhhHhHHhHHhhhhccCCccccccccccc
Q 015278 15 KQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNAND------PVAADIFKEVTFSYNILSDPDKRRQYDTAG 85 (410)
Q Consensus 15 ~~~~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~------~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g 85 (410)
....+|||+||||+++||.+|||+||++|+++||||+|+.+ +.+.++|+.|++||+||+||.+|+.||..+
T Consensus 12 ~~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~ 88 (94)
T d1wjza_ 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred hhhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence 34568999999999999999999999999999999998865 347788999999999999999999999754
No 4
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Probab=99.77 E-value=1.9e-20 Score=157.40 Aligned_cols=67 Identities=22% Similarity=0.313 Sum_probs=61.1
Q ss_pred CCCcccccCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccccc
Q 015278 18 RRDPYEVLGVSRNC--TDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 88 (410)
Q Consensus 18 ~~d~Y~vLgv~~~A--s~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~~~ 88 (410)
..|||+||||+++| +.++||+|||+||++|||||+++ .++|+.|++||+||+||.+|+.||..|...
T Consensus 7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd~~kR~~YD~~~~~~ 75 (114)
T d1gh6a_ 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFW 75 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence 46999999999999 78899999999999999999974 368999999999999999999999987544
No 5
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.64 E-value=1.2e-17 Score=130.17 Aligned_cols=64 Identities=22% Similarity=0.407 Sum_probs=57.7
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCCch-----hhHhHHhHHhhhhccCCccccccccc
Q 015278 20 DPYEVLGVSRNC--TDQEIKSAYRKMALKYHPDKNANDPV-----AADIFKEVTFSYNILSDPDKRRQYDT 83 (410)
Q Consensus 20 d~Y~vLgv~~~A--s~~eIK~aYrklal~~HPDkn~~~~~-----a~~~f~~i~~Ay~vLsdp~kR~~YD~ 83 (410)
|||+||||++++ +.+|||+|||++++.||||++.+.+. +...|+.|++||+||+||.+|+.|+.
T Consensus 2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll 72 (76)
T d1fpoa1 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL 72 (76)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 899999999864 58999999999999999999876542 67889999999999999999999985
No 6
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Probab=99.64 E-value=1.1e-17 Score=131.41 Aligned_cols=65 Identities=18% Similarity=0.334 Sum_probs=59.3
Q ss_pred CCCcccccCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccccc
Q 015278 18 RRDPYEVLGVSRNC--TDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (410)
Q Consensus 18 ~~d~Y~vLgv~~~A--s~~eIK~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~ 86 (410)
..+||+||||++++ +.++||+|||+++++||||++. + .++|++|++||++|+|+.+|..||..+.
T Consensus 10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g-~---~e~~~~in~Ay~~L~d~~~r~~~~~~~~ 76 (79)
T d1fafa_ 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLRMNLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC-C---HHHHHHHHHHHHHHCCHHHHHHHccCCC
Confidence 46899999999988 9999999999999999999985 3 4689999999999999999999998653
No 7
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=4.4e-17 Score=130.62 Aligned_cols=66 Identities=26% Similarity=0.400 Sum_probs=59.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc-hhhHhHHhHHhhhhccCCcccccccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP-VAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~-~a~~~f~~i~~Ay~vLsdp~kR~~YD~~g~ 86 (410)
-+|+|+||||+.+||.+|||+|||+|+++||||+|++++ .|.++|+.|+.||++|++ +..||..+.
T Consensus 15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~~ 81 (88)
T d1iura_ 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNAD 81 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSSS
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccch
Confidence 479999999999999999999999999999999999875 488999999999999974 677776554
No 8
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.59 E-value=1.1e-16 Score=130.76 Aligned_cols=64 Identities=27% Similarity=0.495 Sum_probs=58.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCc---hhhHhHHhHHhhhhccCCccccccc
Q 015278 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP---VAADIFKEVTFSYNILSDPDKRRQY 81 (410)
Q Consensus 18 ~~d~Y~vLgv~~~As~~eIK~aYrklal~~HPDkn~~~~---~a~~~f~~i~~Ay~vLsdp~kR~~Y 81 (410)
..++|++|||...+|.++||+|||++++.||||++++++ .|.+.|+.|++||++|+||.+|+.|
T Consensus 32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y 98 (98)
T d1nz6a_ 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 98 (98)
T ss_dssp TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence 457899999999999999999999999999999988654 2778899999999999999999998
No 9
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.04 E-value=0.0053 Score=46.12 Aligned_cols=27 Identities=26% Similarity=0.393 Sum_probs=24.9
Q ss_pred EEEeCCceeEeeeee-EEEeecCCchhh
Q 015278 267 FAVYGDNFFKSASYM-IEALCAAPFTEE 293 (410)
Q Consensus 267 F~r~Gdnl~~~~~is-~eaL~g~~~~~~ 293 (410)
|.|.|+||+++++|+ .|||+|+++...
T Consensus 2 F~R~G~dL~~~~~I~~~eal~G~~~~i~ 29 (80)
T d1nlta2 2 FKRDGDDLVYEAEIDLLTAIAGGEFALE 29 (80)
T ss_dssp CEEETTEEEEEEEEEHHHHHHCBCCEEE
T ss_pred cEEeCCEEEEEEEeCHHHHhCCCEEEEE
Confidence 899999999999999 999999987664
No 10
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.99 E-value=0.0057 Score=47.08 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=25.0
Q ss_pred EEEeCCceeEeeeee-EEEeecCCchhh
Q 015278 267 FAVYGDNFFKSASYM-IEALCAAPFTEE 293 (410)
Q Consensus 267 F~r~Gdnl~~~~~is-~eaL~g~~~~~~ 293 (410)
|.|.|+||++.++|+ .+||||++...+
T Consensus 2 F~R~G~DL~~~~~I~~~eal~G~~~~i~ 29 (90)
T d1c3ga2 2 FKRDGDDLIYTLPLSFKESLLGFSKTIQ 29 (90)
T ss_dssp EEEETTEEEEEECCBHHHHHHCEEEEEE
T ss_pred CeEeCCeEEEEEEeCHHHHhcCCeEEEe
Confidence 899999999999999 999999987664
No 11
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.79 E-value=0.059 Score=40.05 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=28.7
Q ss_pred EEeeeeeecCcccccccccCCCCccccCC-----CCCCCccce-EEEeccce
Q 015278 220 FLGFPVYRLDQTATSMAAAKDPDAAFFKK-----LDGFQPCEI-TELKAGTH 265 (410)
Q Consensus 220 ~L~~pv~~~~~g~~~~~~~kd~~~~~F~~-----l~g~~~~d~-~~l~~~~H 265 (410)
.|.+.| .+| +.+|+.+.|.. ..+..+||+ ++|++..|
T Consensus 37 ~~~v~I---p~G------~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~H 79 (80)
T d1c3ga1 37 QIDIQL---KPG------WKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSH 79 (80)
T ss_dssp EEEEEC---CTT------CCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCC
T ss_pred EEEEEE---CCC------CCCCcEEEECCccccCcCCCCCCCEEEEEEeCCC
Confidence 455655 788 88999998873 345689999 99999988
No 12
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.62 E-value=0.16 Score=37.15 Aligned_cols=41 Identities=15% Similarity=0.264 Sum_probs=26.5
Q ss_pred ceeEeeeeccCCcEEEEeccCCCcceeeeeeccCCCccee--eeccccccCC
Q 015278 162 SVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSL--ALQEDCTKTG 211 (410)
Q Consensus 162 gv~i~~eqi~~G~v~qvqS~c~sKck~~~f~~~g~Gg~~~--~~~eD~~k~g 211 (410)
|..+...++.+ ++++++++|.. |. |.|.++. ..|..|.+.|
T Consensus 28 G~~~~~~~~g~-~~~~~~~~C~~-C~-------G~G~~i~~~~~C~~C~G~g 70 (74)
T d1nlta3 28 GIKFVTRQMGP-MIQRFQTECDV-CH-------GTGDIIDPKDRCKSCNGKK 70 (74)
T ss_dssp SCEEEEEESSS-EEEEEECSCTT-CS-------SSSSCCCTTSBCSSSTTSC
T ss_pred eeeeEEEEecC-cEEEEEEECcc-Cc-------cceEEeCCCCCCCCCCCee
Confidence 44555566665 66778889977 99 8885432 2456566555
No 13
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.93 E-value=0.7 Score=33.39 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=27.7
Q ss_pred EEeeeeeecCcccccccccCCCCccccC----CCCCCCccce-EEEeccce
Q 015278 220 FLGFPVYRLDQTATSMAAAKDPDAAFFK----KLDGFQPCEI-TELKAGTH 265 (410)
Q Consensus 220 ~L~~pv~~~~~g~~~~~~~kd~~~~~F~----~l~g~~~~d~-~~l~~~~H 265 (410)
.+.+.| .+| +.+|+.+.|+ ..++..|||+ +.|+...|
T Consensus 32 ~~~i~I---p~G------~~~G~~ir~~g~G~~~~~~~~GDl~v~i~~~pH 73 (74)
T d1nlta1 32 ILEVHV---EPG------MKDGQRIVFKGEADQAPDVIPGDVVFIVSERPH 73 (74)
T ss_dssp EEEEEE---CTT------CCTTCEEEETTCSCCCTTCBCCCEEEEEEECCC
T ss_pred cEEEEe---ccc------ccCCeEEEecCCcCCCCCCCCCCEEEEEEecCC
Confidence 444544 667 7777877666 3467789999 99999888
No 14
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}
Probab=75.96 E-value=1 Score=32.89 Aligned_cols=34 Identities=29% Similarity=0.484 Sum_probs=23.7
Q ss_pred CCcEEEEeccCCCcceeeeeeccCCCcceeeeccccccCCcee
Q 015278 172 AGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVT 214 (410)
Q Consensus 172 ~G~v~qvqS~c~sKck~~~f~~~g~Gg~~~~~~eD~~k~gkvt 214 (410)
.|+++ ++++|.. |. |.|.++...|..|.+.|.|.
T Consensus 44 ~g~~~-~~~~C~~-C~-------G~G~~i~~~C~~C~G~G~v~ 77 (79)
T d1exka_ 44 QGFFA-VQQTCPH-CQ-------GRGTLIKDPCNKCHGHGRVE 77 (79)
T ss_dssp ETTEE-EEEECTT-TT-------TSSEECSSBCGGGTTSSEEE
T ss_pred cccce-eeEECcc-cC-------cceeECCCCCCCCCCceEee
Confidence 34443 4557876 99 98876666788888888664
No 15
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I, dispensable insert domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.75 E-value=41 Score=23.85 Aligned_cols=48 Identities=15% Similarity=0.270 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhHHHHHhhHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH
Q 015278 297 LRAVEAEILSKRAELSKFESEYREVLAQFT--------EMTSRYAQEMQAIDELLK 344 (410)
Q Consensus 297 ~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~--------~~~~~~~~~~~~~~~ll~ 344 (410)
..++-+.|..|+++|...+.|+.+|++-+. .++++-....+.+.+-|.
T Consensus 4 MenLq~KI~~Kk~qi~~a~~e~K~ak~d~k~~~~~k~k~~~ekKkK~leRL~EQL~ 59 (72)
T d1k4ta1 4 MMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLM 59 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667888999999999999999988776 445555555555544443
No 16
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=33.67 E-value=59 Score=24.67 Aligned_cols=63 Identities=17% Similarity=0.193 Sum_probs=0.0
Q ss_pred EEeccceeEEEeCCceeEeeeee-EEEeecCCchhh--hhhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHH
Q 015278 259 ELKAGTHVFAVYGDNFFKSASYM-IEALCAAPFTEE--KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTS 330 (410)
Q Consensus 259 ~l~~~~H~F~r~Gdnl~~~~~is-~eaL~g~~~~~~--~~~~~~~e~~~~~k~~e~~~~~~ey~~~~~~~~~~~~ 330 (410)
.|...++++.-=|.|+|..+++. + .+ ..+|..++..+....+++.+.+..+.+.....+++.+
T Consensus 65 ~i~~~~~vlV~lG~g~~vE~~~~eA---------~~~l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l~~ 130 (133)
T d1fxkc_ 65 ELKDTSEVIMSVGAGVAIKKNFEDA---------MESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELLA 130 (133)
T ss_dssp ECCSTTEEEEEEETTEEEEEEHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCceEEEecCCeeeeecHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 17
>d1i11a_ a.21.1.1 (A:) Sox-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.52 E-value=17 Score=25.02 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=33.7
Q ss_pred HHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCccccccccc
Q 015278 37 KSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDT 83 (410)
Q Consensus 37 K~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~ 83 (410)
.+.+|...+.-||+... .+.-+.|...|..|++.++...+|.
T Consensus 14 ~~~~r~~i~~~~p~~~~-----~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (70)
T d1i11a_ 14 AKDERRKILQAFPDMHN-----SNISKILGSRWKAMTNLEKQPYYEE 55 (70)
T ss_dssp HHHHHHHHHTTCSSCCH-----HHHHHHHHHHHTTSCSGGGHHHHHH
T ss_pred HHHHHHHHHHHhccCCH-----HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 35567778888987653 5788899999999999988888775
No 18
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.20 E-value=95 Score=26.10 Aligned_cols=46 Identities=15% Similarity=0.260 Sum_probs=27.2
Q ss_pred hhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 015278 306 SKRAELSKFESEYREVLAQFTEMTSRYAQEMQAI-DELLKQRNEIHA 351 (410)
Q Consensus 306 ~k~~e~~~~~~ey~~~~~~~~~~~~~~~~~~~~~-~~ll~~r~~~~~ 351 (410)
..=.+|..+|.|+.+.-+++.+.+-+++++-... .-|+.+|.+|-.
T Consensus 30 ~~i~~L~~iQ~e~~~l~~e~~~e~~~le~k~~~~~~ply~~R~~iI~ 76 (222)
T d2e50a1 30 EAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIA 76 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc
Confidence 3345666667776666666665555555444333 347777777643
No 19
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.88 E-value=15 Score=26.40 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=34.1
Q ss_pred HHHHHHHHHhcCCCCCCCCchhhHhHHhHHhhhhccCCcccccccccc
Q 015278 37 KSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTA 84 (410)
Q Consensus 37 K~aYrklal~~HPDkn~~~~~a~~~f~~i~~Ay~vLsdp~kR~~YD~~ 84 (410)
.+.+|...+.-|||... .+.-+.|...|..|++.++...++..
T Consensus 14 ~~~~r~~~~~~~P~~~~-----~~Isk~lg~~Wk~ls~~eK~~y~~~A 56 (86)
T d2lefa_ 14 MKEMRANVVAESTLKES-----AAINQILGRRWHALSREEQAKYYELA 56 (86)
T ss_dssp HHHHHHHHHHHSSCCCH-----HHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH-----HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 34568888888998653 57888999999999988888777753
Done!