Query 015279
Match_columns 410
No_of_seqs 301 out of 1310
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 04:48:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015279.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015279hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02870 Probable galacturonos 100.0 3E-117 5E-122 896.7 27.9 410 1-410 124-533 (533)
2 PLN02659 Probable galacturonos 100.0 3E-116 6E-121 889.3 29.6 410 1-410 125-534 (534)
3 PLN02829 Probable galacturonos 100.0 5E-112 1E-116 867.2 28.6 387 1-408 252-638 (639)
4 PLN02910 polygalacturonate 4-a 100.0 2E-111 4E-116 862.2 28.0 392 1-409 266-657 (657)
5 PLN02867 Probable galacturonos 100.0 2E-111 3E-116 858.0 27.7 405 1-408 129-534 (535)
6 PLN02742 Probable galacturonos 100.0 1E-108 3E-113 834.7 29.5 390 1-408 145-534 (534)
7 PLN02523 galacturonosyltransfe 100.0 3E-105 6E-110 811.2 29.5 388 5-408 171-558 (559)
8 PLN02769 Probable galacturonos 100.0 4E-103 9E-108 807.1 28.0 379 1-408 251-629 (629)
9 PLN02718 Probable galacturonos 100.0 1.8E-99 4E-104 777.3 28.4 370 1-409 234-603 (603)
10 cd06429 GT8_like_1 GT8_like_1 100.0 2.2E-58 4.7E-63 442.4 20.8 257 84-396 1-257 (257)
11 PRK15171 lipopolysaccharide 1, 100.0 2.4E-46 5.2E-51 372.4 19.1 262 81-401 23-292 (334)
12 cd06431 GT8_LARGE_C LARGE cata 100.0 3.5E-43 7.7E-48 341.5 19.2 260 85-404 4-277 (280)
13 cd00505 Glyco_transf_8 Members 100.0 4.4E-42 9.5E-47 328.4 18.3 237 84-380 1-245 (246)
14 COG1442 RfaJ Lipopolysaccharid 100.0 7.1E-42 1.5E-46 335.7 17.8 258 83-401 2-267 (325)
15 cd04194 GT8_A4GalT_like A4GalT 100.0 3.2E-41 6.9E-46 322.4 16.0 237 84-380 1-247 (248)
16 PF01501 Glyco_transf_8: Glyco 100.0 1.4E-37 3E-42 294.0 13.5 244 85-382 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 4.2E-34 9.1E-39 277.9 17.9 179 202-398 79-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 5.5E-34 1.2E-38 272.8 13.6 230 84-375 1-240 (248)
19 cd02537 GT8_Glycogenin Glycoge 99.9 3.3E-27 7.2E-32 225.1 16.1 153 202-395 73-237 (240)
20 PLN00176 galactinol synthase 99.9 3.3E-26 7.2E-31 225.7 17.4 174 206-396 100-292 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.8 5.8E-20 1.3E-24 177.6 15.2 141 202-383 76-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.3 3.1E-12 6.7E-17 140.0 8.0 256 79-396 1177-1444(1470)
23 COG5597 Alpha-N-acetylglucosam 98.0 3.4E-06 7.4E-11 81.4 2.3 168 205-392 154-352 (368)
24 PF03407 Nucleotid_trans: Nucl 96.3 0.01 2.2E-07 55.2 7.0 142 203-375 48-202 (212)
25 PLN03182 xyloglucan 6-xylosylt 91.7 0.87 1.9E-05 46.5 8.7 165 200-392 179-375 (429)
26 PF05637 Glyco_transf_34: gala 90.8 0.14 3E-06 49.0 2.1 150 217-374 74-231 (239)
27 PF11051 Mannosyl_trans3: Mann 88.0 1.5 3.3E-05 42.6 7.0 32 212-243 83-114 (271)
28 KOG1928 Alpha-1,4-N-acetylgluc 77.1 1.2 2.5E-05 45.1 1.3 33 205-241 227-259 (409)
29 cd02515 Glyco_transf_6 Glycosy 72.5 91 0.002 30.4 12.8 118 216-352 120-247 (271)
30 KOG1950 Glycosyl transferase, 70.6 4.5 9.7E-05 41.2 3.7 152 217-381 122-288 (369)
31 PF04488 Gly_transf_sug: Glyco 52.4 7.7 0.00017 31.7 1.3 35 202-240 62-97 (103)
32 PLN03181 glycosyltransferase; 45.8 26 0.00057 36.2 4.1 35 200-235 180-214 (453)
33 PF03414 Glyco_transf_6: Glyco 44.8 2.1E+02 0.0045 28.9 10.1 125 214-351 183-311 (337)
34 PF03071 GNT-I: GNT-I family; 44.2 43 0.00094 34.9 5.5 41 202-242 172-214 (434)
35 PF03314 DUF273: Protein of un 41.9 15 0.00032 34.5 1.6 24 212-235 34-57 (222)
36 cd02514 GT13_GLCNAC-TI GT13_GL 41.0 62 0.0014 32.6 6.0 40 202-241 78-119 (334)
37 PRK15384 type III secretion sy 33.7 20 0.00043 34.4 1.0 23 221-243 217-239 (336)
38 PRK15383 type III secretion sy 33.5 21 0.00044 34.3 1.1 23 221-243 220-242 (335)
39 PRK15382 non-LEE encoded effec 33.3 21 0.00045 34.2 1.1 31 221-255 212-242 (326)
40 cd04190 Chitin_synth_C C-termi 29.0 94 0.002 29.1 4.9 24 219-242 73-97 (244)
41 KOG4748 Subunit of Golgi manno 26.8 71 0.0015 32.5 3.6 180 200-399 157-351 (364)
42 COG0836 {ManC} Mannose-1-phosp 21.9 38 0.00083 33.9 0.7 22 282-303 187-208 (333)
43 PF09006 Surfac_D-trimer: Lung 21.6 2.5E+02 0.0055 19.8 4.5 33 13-47 2-34 (46)
No 1
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=2.5e-117 Score=896.68 Aligned_cols=410 Identities=93% Similarity=1.503 Sum_probs=381.7
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
||+.+|||+++++|||||++++|||++++|+|++|++||||+|+|||||||+||||+|||+++.+++++|++|..|+|+|
T Consensus 124 ~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~d 203 (533)
T PLN02870 124 MKNNHYDAKTFAFVLRAMMEKFERELRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSD 203 (533)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|+|++|||+||+||||+|++.|+++|+++|||||||++|+.+|++||++||+++|+|||+++|+|+||+.+++|+|
T Consensus 204 p~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl 283 (533)
T PLN02870 204 NSYHHFVLSTDNILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVL 283 (533)
T ss_pred CcceeEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+|+|+..+++.+|+.+........+.+|.++.++++.++|+|+|+++|+||+||++||+++||||||+||||++||++||
T Consensus 284 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw 363 (533)
T PLN02870 284 EAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLW 363 (533)
T ss_pred HHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHh
Confidence 99999999998887643322222233556677889999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||+||.....+...++++.|+||++|.+..+|+++.||||||||||||++||++++++++++|++++.++
T Consensus 364 ~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~ 443 (533)
T PLN02870 364 DIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 443 (533)
T ss_pred hCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhc
Confidence 99999999999999965433333456778999999999999999999999999999999999999999999999987655
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND 400 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~ 400 (410)
++.++|||+||++|++|+|++++||++||++++||+.....+.+++|+||||+|++|||++.++++|+.+|.+|++++++
T Consensus 444 ~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~~~~~~i~~aaIIHY~G~~KPW~~~~~~~yr~~W~kYl~~s~~ 523 (533)
T PLN02870 444 NLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSKTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSND 523 (533)
T ss_pred CceecccccccHhHHHhcCceEECChHHhcCCCCCcccccccccCCcEEEEECCCCCCccccCccchhHHHHHHHccCch
Confidence 68899999999999999999999999999999999876556778899999999999999999999999999999999999
Q ss_pred hhhcccccCC
Q 015279 401 FVRNCHILET 410 (410)
Q Consensus 401 ~l~~c~~~~~ 410 (410)
|||+|||+|+
T Consensus 524 fl~~Cni~~~ 533 (533)
T PLN02870 524 FIRNCHILES 533 (533)
T ss_pred HhhhcCCCCC
Confidence 9999999985
No 2
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=2.7e-116 Score=889.34 Aligned_cols=410 Identities=60% Similarity=1.096 Sum_probs=380.8
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
|++.+|||+++++|||||++++||+++++|+|++++.||||+|+|||||||+||||+|||+++++++++|++|..|+|+|
T Consensus 125 ~~~~~~d~~~~~~klr~~l~~~E~~~~~~k~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d 204 (534)
T PLN02659 125 VKNSRSDARAFALKLREMVTLLEQRTRTAKIQEYLYRHVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAELVPALVD 204 (534)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHHHhCchhhhccCCcccccccCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|+|++|||+||+||||+|++.|+++|+++|||||||++|+.+|++||.+||+++|+|||+++|+|+||+.+++|++
T Consensus 205 ~~l~Hy~ifSdNvLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl 284 (534)
T PLN02659 205 NSYFHFVLASDNILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVL 284 (534)
T ss_pred CCcceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+|+++...++.+|+.+.......++.+|.....++|.++|+|+|+++|+||+||++||+++||||||+||||++||++||
T Consensus 285 ~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw 364 (534)
T PLN02659 285 EAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLW 364 (534)
T ss_pred HHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHH
Confidence 99999999999998665433223344555555678889999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||+||...+.+...++++.|++|++|.+.+.|+++.||||||||||||++||++++++++++|++++..+
T Consensus 365 ~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~ 444 (534)
T PLN02659 365 DIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKS 444 (534)
T ss_pred hCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccc
Confidence 99999999999999964322222356788999999999889999999999999999999999999999999999987555
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND 400 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~ 400 (410)
++.+||||+|||+|++|+|++++||++||++++||+.+...+.+++|+||||+|++|||.++++++|+++|.+|++++++
T Consensus 445 ~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~~~~~i~~paIIHYnG~~KPW~~~~~~~yr~~W~kYl~~s~~ 524 (534)
T PLN02659 445 DLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSLADAESAGVVHFNGRAKPWLDIAFPQLRPLWAKYIDSSDK 524 (534)
T ss_pred cccccccccchHHHHHhcCCEEECChhheecCCcccccccccccCCcEEEEECCCCCccccccCCcchhHHHHHhccCCH
Confidence 78899999999999999999999999999999999876555677899999999999999999999999999999999999
Q ss_pred hhhcccccCC
Q 015279 401 FVRNCHILET 410 (410)
Q Consensus 401 ~l~~c~~~~~ 410 (410)
|||+|||+|+
T Consensus 525 fl~~Cni~~~ 534 (534)
T PLN02659 525 FIKSCHIRAS 534 (534)
T ss_pred HHHhcCCCCC
Confidence 9999999986
No 3
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=5.5e-112 Score=867.23 Aligned_cols=387 Identities=48% Similarity=0.911 Sum_probs=364.9
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
||+++|||+++++|||||++++|||+++||+|++|++||||+|+|||||||+||||+|||+++++++++|+++ +|+|
T Consensus 252 ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~q~~~l~~laa~t~PK~lHCL~mrLt~Ey~~~~~~~~~~p~~~---~l~d 328 (639)
T PLN02829 252 GKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEYYNLNSSEQQFPNQE---KLED 328 (639)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHHHhCChhhccCCChh---hccC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999888777 8999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|+|++|||+||+||||+|++.|+++|+++|||||||++++.+|++||.+||+++|+|||+++++|+|++.+++|++
T Consensus 329 p~l~Hy~ifSdNVLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~wln~~~~pvl 408 (639)
T PLN02829 329 PQLYHYALFSDNVLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSSYSPVL 408 (639)
T ss_pred CccceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEEehhhcccccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+|++...++++||...... ...++++++|+|+|+++|+|||||++||+++||||||+||||++||++||
T Consensus 409 ~ql~~~~~~~~yf~~~~~~-----------~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw 477 (639)
T PLN02829 409 KQLGSQSMIDYYFRAHRAN-----------SDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLW 477 (639)
T ss_pred HHhhhhhhhhhhhhccccC-----------cccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHH
Confidence 9999999999998653321 12467788999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||+||... .+++..+++|++|.+.++|+++.||||+|||||||++||+++++++++.|++.+.
T Consensus 478 ~iDL~gkviAAVedc~~~-----f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~-- 550 (639)
T PLN02829 478 SIDLKGNVNGAVETCGES-----FHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNH-- 550 (639)
T ss_pred hCCCCCceEEEeccchhh-----hhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHcc--
Confidence 999999999999999643 3567889999999988899999999999999999999999999999999998764
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND 400 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~ 400 (410)
+..+||||+|||++++|+|++++||++||++|+||++....+.+++|+||||+|++|||.+.++++|+++|.+|++++++
T Consensus 551 ~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~KPWle~~i~~yr~lW~kYl~~~~~ 630 (639)
T PLN02829 551 DRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQV 630 (639)
T ss_pred CCccccccCCChHHHHhcCceEecChhheecCCCCCcccchhcccCCeEEEECCCCCccccCCcccchHHHHHHHhcCch
Confidence 34679999999999999999999999999999999876556788999999999999999999999999999999999999
Q ss_pred hhhccccc
Q 015279 401 FVRNCHIL 408 (410)
Q Consensus 401 ~l~~c~~~ 408 (410)
|||+|||+
T Consensus 631 fl~~Cni~ 638 (639)
T PLN02829 631 YLRECNIN 638 (639)
T ss_pred HHHhCCCC
Confidence 99999998
No 4
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=1.6e-111 Score=862.18 Aligned_cols=392 Identities=44% Similarity=0.870 Sum_probs=367.4
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
||+++|||+++++|||||++++|||++++|+|++|++||||+|+|||||||+||||+|||+++++++++|+++ +|+|
T Consensus 266 ak~~~~d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~---~l~d 342 (657)
T PLN02910 266 AKDQLYDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKK---KLED 342 (657)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChh---hccC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999888776 9999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|+|++|||+||+||||+|++.|+++|+++|||||||++|+.+|++||.+||+++|+|||+++++|+|++.+++|+|
T Consensus 343 p~l~Hy~ifSDNVLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl 422 (657)
T PLN02910 343 PSLYHYAIFSDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVL 422 (657)
T ss_pred CcceeEEEEecceeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+|+++...+.+||..+....... -..+++.++|+|+|+++|+||+||++||+++||||||+||||++||++||
T Consensus 423 ~qles~~~~~~yf~~~~~~~~~~-------~~~~~k~r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw 495 (657)
T PLN02910 423 RQLESARIKEYYFKANHPSSLSA-------GADNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLW 495 (657)
T ss_pred HHHhhhhhhhhhhhccccccccc-------cccccccCCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHH
Confidence 99999998888887654321110 12467888999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||+||... ++++..+++|++|.+.+.|+++.||||+|||||||++||++++|+.+..|++.+ .
T Consensus 496 ~iDL~g~v~AAVedc~~~-----f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln--~ 568 (657)
T PLN02910 496 SIDMQGMVNGAVETCKES-----FHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLN--E 568 (657)
T ss_pred hCCcCCceEEEecccchh-----hhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhc--c
Confidence 999999999999999753 357788999999999889999999999999999999999999999888887765 4
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND 400 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~ 400 (410)
+..+||||+|||++++|+|++++||++||+.|+||++......+++|+||||+|++|||.+.++++|+++|.+|++++++
T Consensus 569 ~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v~~~~i~~AAVLHynG~~KPWl~l~i~~Yr~~W~kYl~~d~~ 648 (657)
T PLN02910 569 DRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAIAKYKPYWSRYVQYDNP 648 (657)
T ss_pred cccccccCCCChHHHHHhCceeecCchheecCCCCCcccccccccCcEEEEeCCCCCcccccCcccchHHHHHHccCCCh
Confidence 68899999999999999999999999999999999877666788999999999999999999999999999999999999
Q ss_pred hhhcccccC
Q 015279 401 FVRNCHILE 409 (410)
Q Consensus 401 ~l~~c~~~~ 409 (410)
|||+|||+|
T Consensus 649 fl~~Cni~~ 657 (657)
T PLN02910 649 YLQLCNISE 657 (657)
T ss_pred HHHhCCCCC
Confidence 999999986
No 5
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=1.6e-111 Score=857.98 Aligned_cols=405 Identities=53% Similarity=0.962 Sum_probs=366.1
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
|++.+|||+++++|||||++++|||++++|+|++|++||||+|+|||||||+||||+|||+++++++++|++|..|+|+|
T Consensus 129 ~~~~~~d~~~~~~kl~am~~~~e~~~~~~~~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d 208 (535)
T PLN02867 129 MTSNRQDIKAFAFRTKAMLLKMERKVQSARQRESIYWHLASHGIPKSLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTD 208 (535)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhhhhccC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|+|++|||+||+||||+|++.|+++|+++|||||||++++.+|++||.+||+++|+|||+++|+|+|++.+++|++
T Consensus 209 ~~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~ 288 (535)
T PLN02867 209 PSFHHVVLLTDNVLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVK 288 (535)
T ss_pred CCcceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhccccccccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+++|+.+.++.+|+.+....... .+....+.+++++|+|+|+++|+||+||++||+++||||||+||||++||++||
T Consensus 289 ~~~e~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLw 365 (535)
T PLN02867 289 EMLEIHRLIWSHYYQNLKESDFQ---FEGTHKRSLEALSPSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLW 365 (535)
T ss_pred HHHHHhhhhhhhhhccccccccc---cccccccchhhcChhhhhHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHH
Confidence 99998876655554332110000 011123467788999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||.|..+.......+++++|+||++|.+..+++++.||||||||||||++||++++++++++|++++...
T Consensus 366 diDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~ 445 (535)
T PLN02867 366 ELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNS 445 (535)
T ss_pred hCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhc
Confidence 99999999999988643221122356788999999998889999999999999999999999999999999999987544
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccc-hhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhch
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTS-IESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSN 399 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~-~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~ 399 (410)
...++|||+||+++++|+|++++||++||+.|+||+.... .+.+++|+||||+|++|||++.++++|+++|.+|+++++
T Consensus 446 ~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~~~yR~~W~kyl~~~~ 525 (535)
T PLN02867 446 GLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPEVPREILESAAVLHFSGPAKPWLEIGFPEVRSLWYRHVNFSD 525 (535)
T ss_pred ccccccccccchHHHHhcCcEEECChhhcccCCCcccccchhhhcCCcEEEEECCCCCcccccCCCchhHHHHHhcCccc
Confidence 5688999999999999999999999999999999876532 355689999999999999999999999999999999999
Q ss_pred hhhhccccc
Q 015279 400 DFVRNCHIL 408 (410)
Q Consensus 400 ~~l~~c~~~ 408 (410)
+|+|+|||.
T Consensus 526 ~fl~~cni~ 534 (535)
T PLN02867 526 KFIRKCRIM 534 (535)
T ss_pred hHHHhcccC
Confidence 999999996
No 6
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=1.4e-108 Score=834.75 Aligned_cols=390 Identities=44% Similarity=0.890 Sum_probs=364.4
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
||+++|||+++++|||||++++|||++++|+|++|++||||+|+|||||||+||||+|||++++++.+.++++..++|+|
T Consensus 145 ak~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d 224 (534)
T PLN02742 145 AQDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVD 224 (534)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCchhhhccccccccccccC
Confidence 57889999999999999999999999999999999999999999999999999999999999999877777778889999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|+|++|||++|++|||||++.|+++|++++||||||+.++.+|++||.+|++++|+|+|+++++|+|++.+++|++
T Consensus 225 ~~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl 304 (534)
T PLN02742 225 NNLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVL 304 (534)
T ss_pred CCcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+|+++.....+||..+... -....+.++|+|+|+++|+||+||++||+++||||||+||||++||++||
T Consensus 305 ~ql~~~~~~~~yf~~~~~~-----------~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~ 373 (534)
T PLN02742 305 KQLQDSDTQSYYFSGSQDD-----------GKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLF 373 (534)
T ss_pred HHhhhhhhhhhhccccccc-----------ccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHh
Confidence 9999987666666543311 11344667899999999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||+||... .+++.+|+||++|.++.+|+++.||||+|||||||++||++++++.+..|++.+ .
T Consensus 374 ~~DL~~~viaAVedC~~~-----f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n--~ 446 (534)
T PLN02742 374 SIDLHGNVNGAVETCLET-----FHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQN--V 446 (534)
T ss_pred cCCCCCCEEEEeCchhhh-----hhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhc--c
Confidence 999999999999999653 468889999999999999999999999999999999999999999888888865 3
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND 400 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~ 400 (410)
...++|||+|||++++|+|++++||++||+.|+||+.......+++|+||||+|++|||.+.++++|+++|++|++++++
T Consensus 447 ~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~~W~kYl~~s~~ 526 (534)
T PLN02742 447 DRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHP 526 (534)
T ss_pred ccccccccccchHHHHHcCcceecChhheecccccccccchhhccCCeEEEECCCCCcccccCCcccchHHHHHHccCCH
Confidence 67899999999999999999999999999999999866666788999999999999999999999999999999999999
Q ss_pred hhhccccc
Q 015279 401 FVRNCHIL 408 (410)
Q Consensus 401 ~l~~c~~~ 408 (410)
|||+|||+
T Consensus 527 fl~~Cni~ 534 (534)
T PLN02742 527 YLQQCNFH 534 (534)
T ss_pred HHHhCCCC
Confidence 99999996
No 7
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=2.7e-105 Score=811.21 Aligned_cols=388 Identities=44% Similarity=0.837 Sum_probs=357.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCCCCcc
Q 015279 5 QYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYH 84 (410)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d~~~i 84 (410)
.|||+++++|||+|++++|||++++|+|++|++||||+|+|||||||+||||+|||++++.+.+.+ ++..++++||+++
T Consensus 171 ~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~-~~~~~~l~dp~l~ 249 (559)
T PLN02523 171 SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDEG-KPPPPELEDPSLY 249 (559)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhccC-CCcchhccCCCcc
Confidence 799999999999999999999999999999999999999999999999999999999988866543 3356799999999
Q ss_pred EEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhHHhhh
Q 015279 85 HFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVE 164 (410)
Q Consensus 85 hIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l~~l~ 164 (410)
|+|++|||++|++|||+|++.|+++|++++||||||++++.+|++||.++++++|+|+|++|++|+|++.+++|+++|++
T Consensus 250 Hy~ifSdNvlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~ 329 (559)
T PLN02523 250 HYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLE 329 (559)
T ss_pred eEEEecCcchhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCC
Q 015279 165 NHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDL 244 (410)
Q Consensus 165 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl 244 (410)
+.+.+..||..+..... ....+++.++++|+|+++|+||+||++||+++||||||+||||++||++||++||
T Consensus 330 s~~~~~~~f~~~~~~~~--------~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL 401 (559)
T PLN02523 330 SANLQKFYFENKLENAT--------KDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDM 401 (559)
T ss_pred hhhhhhhhccccccccc--------cccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcC
Confidence 98888888876443211 1124667788999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccc
Q 015279 245 GGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTM 324 (410)
Q Consensus 245 ~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~ 324 (410)
+|+++|||+||... .+++.++++|++|.++..|+++.||||+|||||||++||++++|+++..|.+.+ .+..+
T Consensus 402 ~gkv~aAVeDc~~~-----~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln--~~~~l 474 (559)
T PLN02523 402 DGKVNGAVETCFGS-----FHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLN--ENRTL 474 (559)
T ss_pred CCceEEEehhhhhH-----HHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhc--ccccc
Confidence 99999999999542 357788899999999889999999999999999999999999999998776654 35789
Q ss_pred cCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchhhhhc
Q 015279 325 WKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRN 404 (410)
Q Consensus 325 ~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~~l~~ 404 (410)
||||+|||+|++|+|++++||++||++|+||++....+.+++|+||||+|++|||++.++++|+++|++|++++++|||+
T Consensus 475 ~DqdaLpp~LivF~gri~~LD~rWNvlglGy~~~i~~~~i~~paIIHYnG~~KPWle~~i~~yr~~W~kYl~~~~~fl~~ 554 (559)
T PLN02523 475 WKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQFKPLWTKYVDYDMEFVQA 554 (559)
T ss_pred ccccccchHHHHhcCceEecCchhhccCCccCCCccccccCCCEEEEECCCCCccccCCCCcchHHHHHHHccCCHHHHh
Confidence 99999999999999999999999999999998765567788999999999999999999999999999999999999999
Q ss_pred cccc
Q 015279 405 CHIL 408 (410)
Q Consensus 405 c~~~ 408 (410)
|||+
T Consensus 555 Cn~~ 558 (559)
T PLN02523 555 CNFG 558 (559)
T ss_pred CCCC
Confidence 9997
No 8
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=4.2e-103 Score=807.10 Aligned_cols=379 Identities=34% Similarity=0.627 Sum_probs=347.1
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
||+.+|||.++++|||||++++|||++++++|++|++||||+|+|||||||+||||+|||+++++++++|+++ +|+|
T Consensus 251 ak~~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~---~l~d 327 (629)
T PLN02769 251 AKSCPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMPKSHHCLSMRLTVEYFKSSSLDMEDSNSE---KFSD 327 (629)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhccCCchh---hccC
Confidence 5788999999999999999999999999999999999999999999999999999999999999999888776 9999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|+|++|||++|++|||||++.|+++|++++||||||+.++.+|++||.+|++++|+|||+++++|+|.+.+ .+.+
T Consensus 328 ~~l~Hy~ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~~-~~~~ 406 (629)
T PLN02769 328 PSLRHYVIFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDLD-KFAL 406 (629)
T ss_pred CccceEEEEeccceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeecccc-hHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996654 7899
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+|++...+++.+|..+.. ...+.++++|+|+++|+|||||++||+++||||||+||||++||++||
T Consensus 407 ~~l~~~~~~~~~~~~~~~--------------~~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw 472 (629)
T PLN02769 407 KQLSLPEEFRVSFRSVDN--------------PSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLW 472 (629)
T ss_pred HhhccchhhhhhhccCCC--------------CchhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHh
Confidence 999998888887765321 123456789999999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||+||... ..+++.|++ ..+|+++.||||+|||||||++||++++++++++|++++...
T Consensus 473 ~iDL~gkviAAVedc~~r-----l~~~~~yl~------~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~ 541 (629)
T PLN02769 473 NLDMGGKVNGAVQFCGVR-----LGQLKNYLG------DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKD 541 (629)
T ss_pred cCCCCCCeEEEehhhhhh-----hhhhhhhhc------ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhc
Confidence 999999999999999632 234444554 346888999999999999999999999999999999876433
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND 400 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~ 400 (410)
+...+++|+||++|++|+|++++||++||+.++||+.....+.+++|+||||+|++|||++.+.++|+++||+|++++++
T Consensus 542 ~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i~~~~i~~paIIHYnG~~KPW~e~~i~~yr~~W~kYl~~~~~ 621 (629)
T PLN02769 542 GEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGIDEQAIKKAAVLHYNGNMKPWLELGIPKYKKYWKRFLNRDDR 621 (629)
T ss_pred ccccccccCcCHHHHHhcCeEEECCHHHccccccccccccccccCCcEEEEECCCCCCccCCCCChHHHHHHHHhccCCh
Confidence 46789999999999999999999999999999999876555678899999999999999999999999999999999999
Q ss_pred hhhccccc
Q 015279 401 FVRNCHIL 408 (410)
Q Consensus 401 ~l~~c~~~ 408 (410)
|||+|||+
T Consensus 622 fl~~Cni~ 629 (629)
T PLN02769 622 FMDECNVN 629 (629)
T ss_pred HHhhCCCC
Confidence 99999996
No 9
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=1.8e-99 Score=777.25 Aligned_cols=370 Identities=40% Similarity=0.782 Sum_probs=342.3
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279 1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD 80 (410)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d 80 (410)
||+++|||+++++|||||++++|||+++||+|++|++||||+|+|||||||+||||+|||+++++++++|+++ +|+|
T Consensus 234 a~~~~~d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~PK~lhCL~~rLt~ey~~~~~~~~~~~~~~---~l~d 310 (603)
T PLN02718 234 ASRVFPNCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTTPKGLHCLSMRLTAEYFALDPEKRQLPNQQ---RYND 310 (603)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHhhCChhhccCCChh---hccC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999888776 9999
Q ss_pred CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|+++|||+++||++++||+|+|++.|+++|++++||||||++++++|++||.+++..+++|+|.++++|.|++.++.+++
T Consensus 311 ~~~~Hia~~sDNvlaasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~l 390 (603)
T PLN02718 311 PDLYHYVVFSDNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLL 390 (603)
T ss_pred CcceeEEEEcCCceeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhh
Confidence 99999999999999999999999999988899999999999999999999999998899999999999999988776665
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
+++ +..+++|+|+++|+||+||++||+++||||||+||||++||++||
T Consensus 391 k~l--------------------------------~s~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~ 438 (603)
T PLN02718 391 MKQ--------------------------------NSHDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLW 438 (603)
T ss_pred hhc--------------------------------cccccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHh
Confidence 432 223467899999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
++||+|+++|||+||...... ..+++.+++|++|.+.++|+++.||||+|||||||++||++++++++++|++++.
T Consensus 439 ~iDl~~~v~aaVedC~~~~~~--~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~-- 514 (603)
T PLN02718 439 SLDMKGKVVGAVETCLEGEPS--FRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGV-- 514 (603)
T ss_pred cCCCCCcEEEEeccccccccc--hhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhcc--
Confidence 999999999999999753211 2456678899999988899999999999999999999999999999999999864
Q ss_pred CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279 321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND 400 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~ 400 (410)
...++|||+|||+|++|+|++++||++||++|+||+.......+++|+||||+|++|||.+.+++.|+++|.+|++++++
T Consensus 515 ~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i~~~~i~~aaIIHYnG~~KPWle~~i~~yr~~W~k~v~~~~~ 594 (603)
T PLN02718 515 KRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESGVGASDIEQAAVIHYDGVMKPWLDIGIGKYKRYWNIHVPYHHP 594 (603)
T ss_pred CccccCcccccHHHHHhcCceeecChHHhccCccccccccccccCCCEEEEECCCCCccccCChhhHHHHHHhhcCCCCh
Confidence 34789999999999999999999999999999999876555678899999999999999999999999999999999999
Q ss_pred hhhcccccC
Q 015279 401 FVRNCHILE 409 (410)
Q Consensus 401 ~l~~c~~~~ 409 (410)
|||+|||+|
T Consensus 595 ~l~~Cn~~~ 603 (603)
T PLN02718 595 YLQQCNIHE 603 (603)
T ss_pred HHHhcCCCC
Confidence 999999986
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=2.2e-58 Score=442.37 Aligned_cols=257 Identities=46% Similarity=0.920 Sum_probs=226.4
Q ss_pred cEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhHHhh
Q 015279 84 HHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAV 163 (410)
Q Consensus 84 ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l~~l 163 (410)
+|||+++||.++++|++.|++.|+++|.+++|||+||+++.++|++||.+++..+++|+|..++++.++.....+.++|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 80 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQL 80 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhh
Confidence 69999999888999999999999998899999999999999999999999999999999999999888776666677777
Q ss_pred hhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcC
Q 015279 164 ENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEID 243 (410)
Q Consensus 164 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~d 243 (410)
+... ....+++.+++++|.++|+||+||++||+++||||||+|+||++||++||++|
T Consensus 81 ~~~~-----------------------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~d 137 (257)
T cd06429 81 ESEA-----------------------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTD 137 (257)
T ss_pred hccc-----------------------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCC
Confidence 6432 01245666788999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCcc
Q 015279 244 LGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLT 323 (410)
Q Consensus 244 l~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~ 323 (410)
|+|+++|||+| ||||||||||+++||++++++++++|++++..+...
T Consensus 138 l~~~~~aav~d---------------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~ 184 (257)
T cd06429 138 LGGGVAGAVET---------------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVT 184 (257)
T ss_pred CCCCEEEEEhh---------------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccc
Confidence 99999999976 578999999999999999999999999876432246
Q ss_pred ccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHh
Q 015279 324 MWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVN 396 (410)
Q Consensus 324 ~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~ 396 (410)
+++||.++++|++|+|+++.||++||++++|++.....+..++|+||||+|+.|||...+.++++++||+|+.
T Consensus 185 ~~~~~dqd~ln~~~~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~w~~yl~ 257 (257)
T cd06429 185 LWKLITLPPGLIVFYGLTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAIPSYKELWEKYLS 257 (257)
T ss_pred hhhcCCccHHHHHccCeeEECChHHcccCCcccccccccccCCcEEEEECCCCCCcCCCCCChHHHHHHHHhC
Confidence 6777777777999999999999999999888875433345679999999999999999888899999999974
No 11
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=2.4e-46 Score=372.44 Aligned_cols=262 Identities=24% Similarity=0.337 Sum_probs=192.5
Q ss_pred CCccEEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchh
Q 015279 81 NSYHHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVP 158 (410)
Q Consensus 81 ~~~ihIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~ 158 (410)
++.+|||+++|++| +++|+|.|++.|+++ ..+.|||++++++.+.+++.-.+-. .|
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~------------~~--------- 80 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAK------------QY--------- 80 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHH------------hc---------
Confidence 46899999999987 699999999999765 5799999999999887543211100 00
Q ss_pred hHHhhhhccceeeeecCCcccccccCCCCchhhhhhhccC-CCCCcchhhHHHHhhcccCC-CCCeEEEEecceeeccCC
Q 015279 159 VLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQAR-SPKYISLLNHLRIYIPELFP-HLDKVVFLDDDIVIQRDL 236 (410)
Q Consensus 159 ~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~s~~~y~R~~lp~llp-~~~KvLYLD~DvIV~~DL 236 (410)
+..+..++- +.+ .++.. ...++|.++|+||+||++|| +++||||||+|+||++||
T Consensus 81 -------~~~i~~~~i------------d~~----~~~~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl 137 (334)
T PRK15171 81 -------NTRINIYLI------------NCE----RLKSLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSI 137 (334)
T ss_pred -------CCeEEEEEe------------CHH----HHhCCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCH
Confidence 011332221 111 12221 24689999999999999999 599999999999999999
Q ss_pred hhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHH
Q 015279 237 SPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKE 316 (410)
Q Consensus 237 ~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~ 316 (410)
++||++|++|..+|||.+......+. .+ ...++. | ++ ...|||||||||||++||++++++++++++++
T Consensus 138 ~~L~~~dl~~~~~aav~~d~~~~~~~--~~-~~~l~~--~----~~--~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~ 206 (334)
T PRK15171 138 KELIDLDFAENEIAAVVAEGDAEWWS--KR-AQSLQT--P----GL--ASGYFNSGFLLINIPAWAQENISAKAIEMLAD 206 (334)
T ss_pred HHHHhccCCCCeEEEEEeccchhHHH--HH-HHhcCC--c----cc--cccceecceEEEcHHHHHHhhHHHHHHHHHhc
Confidence 99999999977677774332211010 11 111110 0 11 24699999999999999999999999999986
Q ss_pred hc-cCCccccCcCCCcHHHHhccCCeeecCCcccccc-cCCCCcc--chhhhCCceEEEeeCCCCCCccCCCCCCHHHHH
Q 015279 317 NL-KSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLG-LGYQNKT--SIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWA 392 (410)
Q Consensus 317 ~~-~~~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~-l~~~~~~--~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~ 392 (410)
+. ...+.++|||+| |.+|.|+++.||.+||++. +.+.... .....++|+||||+|+.|||...+.++++++||
T Consensus 207 ~~~~~~~~~~DQDiL---N~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~~~~~~~f~ 283 (334)
T PRK15171 207 PEIVSRITHLDQDVL---NILLAGKVKFIDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWADYPVSQYFL 283 (334)
T ss_pred cccccceeecChhHH---HHHHcCCeEECCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCCCCchHHHHH
Confidence 42 235788999999 9999999999999999863 3222111 112345899999999999999888888999999
Q ss_pred HHHhhchhh
Q 015279 393 KYVNYSNDF 401 (410)
Q Consensus 393 ~Y~~~~~~~ 401 (410)
+|++.|++.
T Consensus 284 ~~~~~spw~ 292 (334)
T PRK15171 284 KAKEASPWK 292 (334)
T ss_pred HHHhcCCCC
Confidence 999998864
No 12
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=3.5e-43 Score=341.45 Aligned_cols=260 Identities=20% Similarity=0.295 Sum_probs=185.0
Q ss_pred EEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhHHh
Q 015279 85 HFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEA 162 (410)
Q Consensus 85 hIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l~~ 162 (410)
-||++. ++| .++|+|.|++.|+. ..++|||++++++.+.++.+.......++.|.+..+.++
T Consensus 4 ~iv~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~------------- 67 (280)
T cd06431 4 AIVCAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEEL------------- 67 (280)
T ss_pred EEEEcc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHh-------------
Confidence 366677 554 68999999999985 459999999999988877655432222333333222111
Q ss_pred hhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchh-hHHHHhhcccCC-CCCeEEEEecceeeccCChhhh
Q 015279 163 VENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLL-NHLRIYIPELFP-HLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 163 l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~-~y~R~~lp~llp-~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
...+...+..++|.. +|+||+||++|| +++||||||+|+||++||++||
T Consensus 68 -----------------------------~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~ 118 (280)
T cd06431 68 -----------------------------KSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELW 118 (280)
T ss_pred -----------------------------hhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHH
Confidence 011111122355644 889999999999 5999999999999999999999
Q ss_pred hc--CCCCC-cceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHh
Q 015279 241 EI--DLGGK-VNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKEN 317 (410)
Q Consensus 241 ~~--dl~g~-~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~ 317 (410)
++ |+.|. ++|||++...-. ...... . ..| +.....|||||||||||++||++++++++..+.+++
T Consensus 119 ~~~~~~~~~~~~a~v~~~~~~~----~~~~~~-~--~~~-----~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~ 186 (280)
T cd06431 119 KIFHKFTGQQVLGLVENQSDWY----LGNLWK-N--HRP-----WPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERE 186 (280)
T ss_pred HHhhhcCCCcEEEEeccchhhh----hhhhhh-c--cCC-----CcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHH
Confidence 98 77665 666666642100 000000 0 000 111235999999999999999999999988777654
Q ss_pred c--cCCccccCcCCCcHHHHhccCC---eeecCCcccccccC-CCCccchhhhCCceEEEeeCCCCCCccCCC-CCCHHH
Q 015279 318 L--KSNLTMWKLGTLPPALIAFKGH---VHPIDPSWHLLGLG-YQNKTSIESVKKAAVIHYNGQSKPWLQIGF-EHLRPF 390 (410)
Q Consensus 318 ~--~~~~~~~dqd~L~~~n~~f~~~---~~~L~~~wN~~~l~-~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~-~~~~~~ 390 (410)
. .....++|||+| |.+|.++ ++.||.+||++... ..........++|+||||+|+.|||...+. ++|+++
T Consensus 187 ~~~~~~~~~~DQDiL---N~v~~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~~~~~ 263 (280)
T cd06431 187 LMSMLSTSLADQDIF---NAVIKQNPFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNL 263 (280)
T ss_pred HhhcCCCCcCcHHHH---HHHHcCCcceeEECCCccccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCChHHHHH
Confidence 2 124678999999 8999999 89999999987421 111111223468999999999999987764 899999
Q ss_pred HHHHHhhchhhhhc
Q 015279 391 WAKYVNYSNDFVRN 404 (410)
Q Consensus 391 W~~Y~~~~~~~l~~ 404 (410)
|.+|++++..-||+
T Consensus 264 ~~~~~~~~~~~l~~ 277 (280)
T cd06431 264 YLTFLEYDGNLLRR 277 (280)
T ss_pred HHHHHhcCchhhhh
Confidence 99999999888875
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=4.4e-42 Score=328.43 Aligned_cols=237 Identities=22% Similarity=0.318 Sum_probs=176.6
Q ss_pred cEEEEEeCC-Cc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 84 HHFILSTDN-IL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 84 ihIv~~sDn-~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|||++++++ +| +++|+|.|+++|+++ .++|||++++++.+..+..-.+....+..+++..++.-
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~----------- 67 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDIL----------- 67 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEecccc-----------
Confidence 688876554 66 699999999999975 69999999999988765433322112222322211000
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
.. ..+. ...++++..+|+||++|++||+++||||||+|+||++||++||
T Consensus 68 -----------------------------~~-~~~~-~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~ 116 (246)
T cd00505 68 -----------------------------DS-VDSE-HLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELW 116 (246)
T ss_pred -----------------------------Cc-chhh-hhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHh
Confidence 00 0001 1135789999999999999999999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
+++++|+.+|||+|+..... ...++. ..+...+.+||||||||||+++||++++.+++.++..++. .
T Consensus 117 ~~~l~~~~~aav~d~~~~~~---~~~~~~---------~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~-~ 183 (246)
T cd00505 117 DTPLGGQELAAAPDPGDRRE---GKYYRQ---------KRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSL-S 183 (246)
T ss_pred hccCCCCeEEEccCchhhhc---cchhhc---------ccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhc-c
Confidence 99999999999999864210 011111 1123445689999999999999998888888888776653 3
Q ss_pred CccccCcCCCcHHHHhccCC---eeecCCcccccccCCCCcc--chhhhCCceEEEeeCCCCCCc
Q 015279 321 NLTMWKLGTLPPALIAFKGH---VHPIDPSWHLLGLGYQNKT--SIESVKKAAVIHYNGQSKPWL 380 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~---~~~L~~~wN~~~l~~~~~~--~~~~~~~~~IIHy~G~~KPW~ 380 (410)
...++|||+| |.+|+++ +..||.+||++..++.... ..+..++|+||||+|+.|||.
T Consensus 184 ~~~~~DQd~L---N~~~~~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~ 245 (246)
T cd00505 184 SLSGGDQDLL---NTFFKQVPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWN 245 (246)
T ss_pred cCccCCcHHH---HHHHhcCCCeEEECCCeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCC
Confidence 5788999999 8999998 9999999999865543221 134567999999999999996
No 14
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=7.1e-42 Score=335.72 Aligned_cols=258 Identities=21% Similarity=0.253 Sum_probs=195.2
Q ss_pred ccEEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 83 YHHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 83 ~ihIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
.++||+++|++| +++|+|.|++.|++. -.+.|||++++++.+.+++.-.+ +++|.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~------------~~~f~---------- 58 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNET------------AEPFK---------- 58 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHH------------HHhhc----------
Confidence 579999999988 699999999999974 46999999999999876532221 11121
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCC--CCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARS--PKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSP 238 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~e 238 (410)
..+....- + .+.++..+ ++++|.++|+||+||++||+++|+||||+||||+|||++
T Consensus 59 ------~~i~~~~i-d---------------~~~~~~~~~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~ 116 (325)
T COG1442 59 ------SFIVLEVI-D---------------IEPFLDYPPFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSE 116 (325)
T ss_pred ------cceeeEEE-e---------------chhhhcccccccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHH
Confidence 00111110 0 01223322 578999999999999999999999999999999999999
Q ss_pred hhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhc
Q 015279 239 LWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENL 318 (410)
Q Consensus 239 L~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~ 318 (410)
||.++++|+++|||.|...... .++..+ .........|||||||++|++.||++++++++++++++..
T Consensus 117 lf~~~~~~~~~aaV~D~~~~~~---~~~~~~---------~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~ 184 (325)
T COG1442 117 LFFIDLEEYYLAAVRDVFSHYM---KEGALR---------LEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKE 184 (325)
T ss_pred HHhcCCCcceEEEEeehhhhhh---hhhhhH---------hhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccc
Confidence 9999999999999999864211 010000 0112234679999999999999999999999999997754
Q ss_pred cCCccccCcCCCcHHHHhccCCeeecCCccccccc-CCCCcc--chhhhCCceEEEeeCCCCCCccCCCCCC-HHHHHHH
Q 015279 319 KSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGL-GYQNKT--SIESVKKAAVIHYNGQSKPWLQIGFEHL-RPFWAKY 394 (410)
Q Consensus 319 ~~~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l-~~~~~~--~~~~~~~~~IIHy~G~~KPW~~~~~~~~-~~~W~~Y 394 (410)
+.+.++|||+| |++|++++.+||.+||.+.. .+..+. ......+|.|+||+|+.|||...+.+.+ ...|...
T Consensus 185 -~~~~~~DQdiL---N~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~~w~~i 260 (325)
T COG1442 185 -NDLLYPDQDIL---NMIFEDRVLELPIRYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDSSNYPRSHEWHEI 260 (325)
T ss_pred -cccCCccccHH---HHHHHhhhhccCcccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCccccccHHHHHHHH
Confidence 57899999999 99999999999999999743 222111 1345578999999999999999886544 4777777
Q ss_pred Hhhchhh
Q 015279 395 VNYSNDF 401 (410)
Q Consensus 395 ~~~~~~~ 401 (410)
+..++++
T Consensus 261 ~~~~p~~ 267 (325)
T COG1442 261 LAETPWK 267 (325)
T ss_pred HhcCCcc
Confidence 7766654
No 15
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=3.2e-41 Score=322.36 Aligned_cols=237 Identities=25% Similarity=0.367 Sum_probs=179.7
Q ss_pred cEEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhHH
Q 015279 84 HHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLE 161 (410)
Q Consensus 84 ihIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l~ 161 (410)
||||+++|+.| +++|++.|+++|+++ +.++|||++++++.+.++..-..-.-.+..|++..+
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i--------------- 64 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKI--------------- 64 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEc---------------
Confidence 69999999987 799999999999985 579999999998877654321110001111111110
Q ss_pred hhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhh
Q 015279 162 AVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWE 241 (410)
Q Consensus 162 ~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~ 241 (410)
++..+.. .. ...++++.++|+||++|+++|+++||||||+|+||++||++||+
T Consensus 65 -------------------------~~~~~~~-~~-~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~ 117 (248)
T cd04194 65 -------------------------DNDDFKF-FP-ATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFD 117 (248)
T ss_pred -------------------------CHHHHhc-CC-cccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhc
Confidence 0000110 00 03467899999999999999999999999999999999999999
Q ss_pred cCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCC
Q 015279 242 IDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSN 321 (410)
Q Consensus 242 ~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~ 321 (410)
+|++|+++|||+|+..... ...+. ..+.....+||||||||+|+++||+++++++++++++++. ..
T Consensus 118 ~~~~~~~~aa~~d~~~~~~----~~~~~---------~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~-~~ 183 (248)
T cd04194 118 IDLGDNLLAAVRDPFIEQE----KKRKR---------RLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYG-GR 183 (248)
T ss_pred CCcCCCEEEEEecccHHHH----HHHHh---------hcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCC-Cc
Confidence 9999999999999864311 00000 1234456789999999999999999999999999999875 35
Q ss_pred ccccCcCCCcHHHHhccCCeeecCCcccccccCCCCcc--------chhhhCCceEEEeeCCCCCCc
Q 015279 322 LTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKT--------SIESVKKAAVIHYNGQSKPWL 380 (410)
Q Consensus 322 ~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~--------~~~~~~~~~IIHy~G~~KPW~ 380 (410)
..++|||+| |.+|++++..||.+||++...+.... .....++++||||+|+.|||.
T Consensus 184 ~~~~DQd~L---N~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 184 LIYPDQDIL---NAVLKDKILYLPPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred eeeCChHHH---HHHHhCCeEEcCcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 789999999 89999999999999999765432111 124568999999999999996
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=1.4e-37 Score=293.97 Aligned_cols=244 Identities=25% Similarity=0.437 Sum_probs=166.5
Q ss_pred EEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhHHh
Q 015279 85 HFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEA 162 (410)
Q Consensus 85 hIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l~~ 162 (410)
||++++|..| +++|+|+|+++|++++..++|||++++++.+.++.......-. . .+
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~------~---~~------------- 58 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEV------I---EI------------- 58 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCC------C---TT-------------
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccc------c---ce-------------
Confidence 7999999987 7999999999999987889999999999887765432211100 0 00
Q ss_pred hhhccceeeeecCCcccccccCCCCchhhhh-hhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhh
Q 015279 163 VENHDGIRNYYHGNHVAGANLSDTTPRTFAS-KLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWE 241 (410)
Q Consensus 163 l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~ 241 (410)
....+... ..... ........+++..+|+||+++++||+++||||||+||||.+||++||+
T Consensus 59 ------~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~ 120 (250)
T PF01501_consen 59 ------EPIEFPDI------------SMLEEFQFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFD 120 (250)
T ss_dssp ------ECEEETSG------------GHHH--TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC
T ss_pred ------eeeccchH------------HhhhhhhhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhc
Confidence 01111000 00000 011223568899999999999999999999999999999999999999
Q ss_pred cCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCC
Q 015279 242 IDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSN 321 (410)
Q Consensus 242 ~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~ 321 (410)
++++|+.+||++++.... ......+..........+||||||||+|+++||++++.+++.++++++.. .
T Consensus 121 ~~~~~~~~~a~~~~~~~~----------~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~-~ 189 (250)
T PF01501_consen 121 LDLQGKYLAAVEDESFDN----------FPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM-K 189 (250)
T ss_dssp ---TTSSEEEEE----HH----------HHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT-T
T ss_pred ccchhhhccccccchhhh----------hhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc-c
Confidence 999999999999932211 00000011011233458999999999999999999999999999887642 5
Q ss_pred ccccCcCCCcHHHHhccCCeeecCCcccccccCCC--CccchhhhCCceEEEeeCCCCCCccC
Q 015279 322 LTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQ--NKTSIESVKKAAVIHYNGQSKPWLQI 382 (410)
Q Consensus 322 ~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~--~~~~~~~~~~~~IIHy~G~~KPW~~~ 382 (410)
..+.||++| |++|++++..||.+||+...++. ........++++||||+|..|||...
T Consensus 190 ~~~~DQ~~l---n~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 190 LGFPDQDIL---NIVFYGNIKPLPCRYNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp -SSCHHHHH---HHHHTTGEEEEEGGGSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred cCcCchHHH---hhhccceeEEECchhccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 778999999 89999999999999999865541 11112456899999999999999864
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=4.2e-34 Score=277.87 Aligned_cols=179 Identities=15% Similarity=0.278 Sum_probs=134.8
Q ss_pred CcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhc--CCCCC-cceeeecccCCchhhhhhhhhcccCCCchhh
Q 015279 202 YISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEI--DLGGK-VNGAVETCRGEDEWVMSKRFRNYFNFSHPLI 278 (410)
Q Consensus 202 ~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~--dl~g~-~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i 278 (410)
.+++.+|+||++|++||++|||||||+||||.+||++||++ |++|. ++|++++...... ..+..+. .+|
T Consensus 79 l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~----~~~~~~~--~~~-- 150 (304)
T cd06430 79 LFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNI----GWYNRFA--RHP-- 150 (304)
T ss_pred cccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccch----hhhhhhc--ccC--
Confidence 45679999999999999999999999999999999999999 99986 4455555322110 0011110 111
Q ss_pred hccCCCCCCCceeeEEEEechHHhh-----------hcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccCC---eeec
Q 015279 279 AKHLDPEECAWAYGMNIFDLRAWRK-----------TNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGH---VHPI 344 (410)
Q Consensus 279 ~~~~~~~~~yfNsGVllinL~~wR~-----------~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~~---~~~L 344 (410)
+ ....+||||||||||++||+ .+++++++++++++. ..+.++|||+| |++|+++ ++.|
T Consensus 151 ---~-~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~DQDiL---N~v~~~~p~~~~~L 222 (304)
T cd06430 151 ---Y-YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK-LKITWGDQDLI---NIIFHHNPEMLYVF 222 (304)
T ss_pred ---c-ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcc-cCCCCCCHHHH---HHHHcCCCCeEEEc
Confidence 1 12347999999999999999 788999999999875 46889999999 8999998 9999
Q ss_pred CCcccccccC--CCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhc
Q 015279 345 DPSWHLLGLG--YQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYS 398 (410)
Q Consensus 345 ~~~wN~~~l~--~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~ 398 (410)
|.+||++... |.......+.+.++|||++++.| .....+.++.++....+|+
T Consensus 223 p~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~--~~~~~~~f~~~~~~~~~~~ 276 (304)
T cd06430 223 PCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRGVY--HSDKQPAFRAVYEAIREYT 276 (304)
T ss_pred CccccCCccceeecccccccccccceEEEcCCCCC--CCccchHHHHHHHHHHhcc
Confidence 9999976532 22222223456899999998666 4455667888888877766
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=5.5e-34 Score=272.81 Aligned_cols=230 Identities=18% Similarity=0.249 Sum_probs=155.5
Q ss_pred cEEEE-EeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 84 HHFIL-STDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 84 ihIv~-~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
|||+. ++|+.| +++|+|.|+++|+. ..++|||++++++.+..+..-.+-.-.++.
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~~~~-------------------- 58 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEYGFE-------------------- 58 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHhCCc--------------------
Confidence 46655 455666 69999999999985 569999999999987654211110000111
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCC-CCCeEEEEecceeeccCChhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFP-HLDKVVFLDDDIVIQRDLSPL 239 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp-~~~KvLYLD~DvIV~~DL~eL 239 (410)
+..+.- + .|.. +........+..+|+|++++++|| +++||||||+|+||.+||++|
T Consensus 59 --------i~~i~i-~----------~~~~----~~~~~~~~~~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL 115 (248)
T cd06432 59 --------YELVTY-K----------WPRW----LHKQTEKQRIIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKEL 115 (248)
T ss_pred --------eEEEEe-c----------Chhh----hhcccccchhHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHH
Confidence 111100 0 0110 011011111356799999999999 599999999999999999999
Q ss_pred hhcCCCCCcceeeecccCCchhhhhhhh--hcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHH--
Q 015279 240 WEIDLGGKVNGAVETCRGEDEWVMSKRF--RNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLK-- 315 (410)
Q Consensus 240 ~~~dl~g~~iaAv~d~~~~~~~~~~~~~--~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~-- 315 (410)
|++||+|+++|||+||...... ...++ .++- ..++ ....|||||||||||++||++++++++.++++
T Consensus 116 ~~~dl~~~~~Aav~d~~~~~~~-~~~~~~~~~~~-------~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l 186 (248)
T cd06432 116 MDMDLKGAPYGYTPFCDSRKEM-DGFRFWKQGYW-------KSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQL 186 (248)
T ss_pred HhcCcCCCeEEEeeccccchhc-ccchhhhhhhh-------hhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999999998642100 00010 0110 1122 24469999999999999999999997776665
Q ss_pred -HhccCCccccCcCCCcHHHHhccCC-eeecCCcccccccCCCCccchhhhCCceEEEeeCC
Q 015279 316 -ENLKSNLTMWKLGTLPPALIAFKGH-VHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQ 375 (410)
Q Consensus 316 -~~~~~~~~~~dqd~L~~~n~~f~~~-~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~ 375 (410)
++. ..+.++|||+| |.++.++ ++.||.+||++.. +. ..+..+.|.+|||..+
T Consensus 187 ~~~~-~~l~~~DQDiL---N~v~~~~~i~~Lp~~w~~~~~-~~---~~~~~~~~~~~~~~~~ 240 (248)
T cd06432 187 SQDP-NSLANLDQDLP---NNMQHQVPIFSLPQEWLWCET-WC---SDESKKKAKTIDLCNN 240 (248)
T ss_pred hcCC-CccccCCchhh---HHHhccCCeEECChHHHHHHH-Hh---cccccCccceeecccC
Confidence 332 35788999999 8999885 9999999998632 11 1134678999999864
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.95 E-value=3.3e-27 Score=225.13 Aligned_cols=153 Identities=18% Similarity=0.204 Sum_probs=118.4
Q ss_pred CcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhcc
Q 015279 202 YISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKH 281 (410)
Q Consensus 202 ~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~ 281 (410)
+++..+|.||+++++. +++||||||+|+||.+||++||++ +..+||+.|+..
T Consensus 73 ~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~~------------------------ 124 (240)
T cd02537 73 PRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCGW------------------------ 124 (240)
T ss_pred hHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccCc------------------------
Confidence 4567889999999975 699999999999999999999988 667888876521
Q ss_pred CCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccCC--eeecCCcccccccCCCCcc
Q 015279 282 LDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGH--VHPIDPSWHLLGLGYQNKT 359 (410)
Q Consensus 282 ~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~~--~~~L~~~wN~~~l~~~~~~ 359 (410)
..|||||||++|++. +..+++++++.+.. ...++|||+| |.+|.++ +..||.+||++...+....
T Consensus 125 ----~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~--~~~~~DQdiL---N~~~~~~~~~~~l~~~yN~~~~~~~~~~ 191 (240)
T cd02537 125 ----PDLFNSGVFVLKPSE----ETFNDLLDALQDTP--SFDGGDQGLL---NSYFSDRGIWKRLPFTYNALKPLRYLHP 191 (240)
T ss_pred ----cccccceEEEEcCCH----HHHHHHHHHHhccC--CCCCCCHHHH---HHHHcCCCCEeECCcceeeehhhhccCc
Confidence 138899999999964 45677888887653 3678999999 8999999 9999999998643322111
Q ss_pred c-hhhhCCceEEEeeCCCCCCccCCCC---------CCHHHHHHHH
Q 015279 360 S-IESVKKAAVIHYNGQSKPWLQIGFE---------HLRPFWAKYV 395 (410)
Q Consensus 360 ~-~~~~~~~~IIHy~G~~KPW~~~~~~---------~~~~~W~~Y~ 395 (410)
. ....++|+||||+|+.|||...+.+ .....||+..
T Consensus 192 ~~~~~~~~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~ 237 (240)
T cd02537 192 EALWFGDEIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIY 237 (240)
T ss_pred hhhcccCCcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHH
Confidence 1 2345689999999999999876543 2355666543
No 20
>PLN00176 galactinol synthase
Probab=99.94 E-value=3.3e-26 Score=225.75 Aligned_cols=174 Identities=23% Similarity=0.360 Sum_probs=121.4
Q ss_pred hhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhh----hc----ccCCCchh
Q 015279 206 LNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRF----RN----YFNFSHPL 277 (410)
Q Consensus 206 ~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~----~~----~l~~s~p~ 277 (410)
.+|.||.++++. +++||||||+|+||.++|++||+++ +..+|||.||.+...+....++ .. .+++ |.
T Consensus 100 i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w--p~ 174 (333)
T PLN00176 100 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW--PA 174 (333)
T ss_pred hhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccc--hh
Confidence 467899999976 5999999999999999999999884 3468999999764221100000 00 0111 11
Q ss_pred hhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccCCeeecCCcccccc-cCCC
Q 015279 278 IAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLG-LGYQ 356 (410)
Q Consensus 278 i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~-l~~~ 356 (410)
. .+. +...||||||||||++.|+.+++ +++++.+. ...++|||+| |.+|.+++.+||.+||++. ..+.
T Consensus 175 ~-~g~-~~~~yFNSGVlvinps~~~~~~l----l~~l~~~~--~~~f~DQD~L---N~~F~~~~~~Lp~~YN~~~~~~~~ 243 (333)
T PLN00176 175 E-LGP-PPPLYFNAGMFVFEPSLSTYEDL----LETLKITP--PTPFAEQDFL---NMFFRDIYKPIPPVYNLVLAMLWR 243 (333)
T ss_pred h-ccC-CCCCeEEeEEEEEEcCHHHHHHH----HHHHHhcC--CCCCCCHHHH---HHHHcCcEEECCchhcCchhhhhh
Confidence 0 111 24679999999999999997554 45665542 4578999999 9999999999999999863 3232
Q ss_pred CccchhhhCCceEEEeeC-CCCCCccCCCC---------CCHHHHHHHHh
Q 015279 357 NKTSIESVKKAAVIHYNG-QSKPWLQIGFE---------HLRPFWAKYVN 396 (410)
Q Consensus 357 ~~~~~~~~~~~~IIHy~G-~~KPW~~~~~~---------~~~~~W~~Y~~ 396 (410)
.+. ....++++||||+| ..|||...+.. ..-+.||...+
T Consensus 244 ~~~-~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~ 292 (333)
T PLN00176 244 HPE-NVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYN 292 (333)
T ss_pred Chh-hcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhc
Confidence 221 12356899999997 57999865422 13467887654
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.83 E-value=5.8e-20 Score=177.65 Aligned_cols=141 Identities=14% Similarity=0.207 Sum_probs=109.8
Q ss_pred CcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhcc
Q 015279 202 YISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKH 281 (410)
Q Consensus 202 ~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~ 281 (410)
.++. +|.||.++++ ++++||||||+|+||.++|++||+++.. ..+||+. ..
T Consensus 76 ~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~-~~------------------------- 126 (278)
T cd06914 76 YWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPR-AY------------------------- 126 (278)
T ss_pred cHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCcc-cceeeec-Cc-------------------------
Confidence 4554 4999999999 6799999999999999999999998733 3345432 10
Q ss_pred CCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccCC-------eeecCCc-cccccc
Q 015279 282 LDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGH-------VHPIDPS-WHLLGL 353 (410)
Q Consensus 282 ~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~~-------~~~L~~~-wN~~~l 353 (410)
.||||||||||++.|+.+++.+++.+..... ...+|||+| |.+|.|+ +..||.+ ||++..
T Consensus 127 -----~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~----~~~~DQdiL---N~~~~~~~~~~~~~~~~Lp~~~y~llt~ 194 (278)
T cd06914 127 -----WKFASHLMVIKPSKEAFKELMTEILPAYLNK----KNEYDMDLI---NEEFYNSKQLFKPSVLVLPHRQYGLLTG 194 (278)
T ss_pred -----ceecceeEEEeCCHHHHHHHHHHHHHhcccC----CCCCChHHH---HHHHhCCccccCcceEEcCccccccCCh
Confidence 1789999999999999999999888776532 257899999 8999999 9999996 998753
Q ss_pred CCCCc-------------c---chhhhCCceEEEeeCC--CCCCccCC
Q 015279 354 GYQNK-------------T---SIESVKKAAVIHYNGQ--SKPWLQIG 383 (410)
Q Consensus 354 ~~~~~-------------~---~~~~~~~~~IIHy~G~--~KPW~~~~ 383 (410)
.+..+ . ..+...++++|||++. .|||....
T Consensus 195 ~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 195 EFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred hhcccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 22211 0 1234478999999986 79998753
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.31 E-value=3.1e-12 Score=140.02 Aligned_cols=256 Identities=18% Similarity=0.311 Sum_probs=170.8
Q ss_pred CCCCccEEEEE-eCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEeccccccccccc
Q 015279 79 SDNSYHHFILS-TDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRE 155 (410)
Q Consensus 79 ~d~~~ihIv~~-sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~ 155 (410)
.|.+.|||.-. |-+-| .+-++|.|+++|++.| +.|.++-.-+|.. | ++
T Consensus 1177 ~~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPt-----------------------F----Ke 1227 (1470)
T KOG1879|consen 1177 KDKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPT-----------------------F----KE 1227 (1470)
T ss_pred CccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChH-----------------------H----HH
Confidence 35568999864 44555 5899999999999977 9997777665532 1 12
Q ss_pred chhhHHhhhhccceeeeecCCcccccccCCCCchhhhhh-hccCCCCCcchhhHHHHhhcccCC-CCCeEEEEecceeec
Q 015279 156 NVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASK-LQARSPKYISLLNHLRIYIPELFP-HLDKVVFLDDDIVIQ 233 (410)
Q Consensus 156 ~~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~s~~~y~R~~lp~llp-~~~KvLYLD~DvIV~ 233 (410)
.+|.+.. ...+.+.+-. + -.|.++..+ -+.| -+..|--|||.-+|| +++||||.|+|-||+
T Consensus 1228 ~iP~mA~---eYnFeyElv~----Y-----kWPrWLhqQ~EKQR-----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR 1290 (1470)
T KOG1879|consen 1228 SIPHMAK---EYNFEYELVQ----Y-----KWPRWLHQQTEKQR-----IIWGYKILFLDVLFPLNVDKVIFVDADQIVR 1290 (1470)
T ss_pred HHHHHHH---HhCceEEEEE----e-----cCchhhhhhhhhhh-----hhhhhhhhhhhhccccccceEEEEcchHhhh
Confidence 2333321 1122222210 1 145554422 1122 245667778888999 799999999999999
Q ss_pred cCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHH
Q 015279 234 RDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSW 313 (410)
Q Consensus 234 ~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~ 313 (410)
.||.||.+.||+|.+.|-++-|..+ +.+..|--|.....++.+ ....|.-|...|+||++.|+-....++.-.
T Consensus 1291 ~DL~EL~dfdl~GaPygYtPfCdsR------~EMDGyRFWK~GYW~~hL-~grkYHISALYVVDLkrFReiaAGDrLR~q 1363 (1470)
T KOG1879|consen 1291 ADLKELMDFDLGGAPYGYTPFCDSR------REMDGYRFWKQGYWKKHL-RGRKYHISALYVVDLKRFREIAAGDRLRGQ 1363 (1470)
T ss_pred hhhHHHHhcccCCCccccCcccccc------ccccchhHHhhhHHHHHh-ccCccccceeeeeeHHHHHhcccchHHHHH
Confidence 9999999999999999999999753 234444444555444434 246799999999999999998777777644
Q ss_pred HH---HhccCCccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCC----CCC
Q 015279 314 LK---ENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIG----FEH 386 (410)
Q Consensus 314 ~~---~~~~~~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~----~~~ 386 (410)
.+ +.++ .+.--|||.=| |+...--|+.||..|=++.-.. +.+..+.+++|--|.+ ||.... ..+
T Consensus 1364 YQ~LS~DPN-SLsNLDQDLPN--nm~hqVpIkSLPqeWLWCETWC----~d~skkkAktIDLCnN--P~TKEpKL~~A~R 1434 (1470)
T KOG1879|consen 1364 YQALSQDPN-SLSNLDQDLPN--NMQHQVPIKSLPQEWLWCETWC----DDESKKKAKTIDLCNN--PLTKEPKLDAARR 1434 (1470)
T ss_pred HHhhcCCcc-hhhhccccccc--cceeecccccCCcchhhhhhhc----CchhhhhchhhhhhcC--ccccchhhHHHhh
Confidence 44 2333 45556999654 6666778999999998764321 1245678889988864 886641 223
Q ss_pred CHHHHHHHHh
Q 015279 387 LRPFWAKYVN 396 (410)
Q Consensus 387 ~~~~W~~Y~~ 396 (410)
.-..|..|..
T Consensus 1435 iv~EW~dyD~ 1444 (1470)
T KOG1879|consen 1435 IVSEWTDYDA 1444 (1470)
T ss_pred hcCCCcccch
Confidence 3445666643
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.97 E-value=3.4e-06 Score=81.36 Aligned_cols=168 Identities=16% Similarity=0.209 Sum_probs=87.7
Q ss_pred hhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCch----------h------hhh----
Q 015279 205 LLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDE----------W------VMS---- 264 (410)
Q Consensus 205 ~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~----------~------~~~---- 264 (410)
..++.++-+.+.. ++|||+|||+|.||.+++++||+.+ -+-.+|.+|...... + ...
T Consensus 154 ~~mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r 230 (368)
T COG5597 154 LDMFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMR 230 (368)
T ss_pred HHHhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccH
Confidence 3556777666665 5999999999999999999999876 244555555432110 0 000
Q ss_pred hh-hhcccCC--CchhhhccC-CCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccC-
Q 015279 265 KR-FRNYFNF--SHPLIAKHL-DPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKG- 339 (410)
Q Consensus 265 ~~-~~~~l~~--s~p~i~~~~-~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~- 339 (410)
.. +--|+++ +++-+-... ++-..+||||.||++..+..-..+..-.+-.+-. +..+-.|..+ |+.++.
T Consensus 231 ~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklyd----da~mmeqsll---nlaYn~~ 303 (368)
T COG5597 231 AALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYD----DADMMEQSLL---NLAYNYE 303 (368)
T ss_pred hhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhh----hhhHHHHHHH---HHHHhhh
Confidence 00 1122322 111111122 2236799999999999876533222211111110 1222245555 555422
Q ss_pred ---CeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCC---CCHHHHH
Q 015279 340 ---HVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFE---HLRPFWA 392 (410)
Q Consensus 340 ---~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~---~~~~~W~ 392 (410)
-|..++++|| ||... ..++.-.+-+|+ |||...+.. -....|+
T Consensus 304 g~FPwerld~~yN----G~wa~--~ndlPylka~Hg----K~W~y~g~~fp~i~~~ew~ 352 (368)
T COG5597 304 GFFPWERLDPRYN----GYWAD--ANDLPYLKAWHG----KPWFYTGEQFPDIAGLEWP 352 (368)
T ss_pred ccCchhhcCcccc----ccccc--ccccchHHHhhc----CcCCCCcccChhhhcCcCh
Confidence 3455666766 43211 111222345664 999887643 1345566
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=96.34 E-value=0.01 Score=55.17 Aligned_cols=142 Identities=19% Similarity=0.186 Sum_probs=75.3
Q ss_pred cchhhHHHH-hhcccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhcc
Q 015279 203 ISLLNHLRI-YIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKH 281 (410)
Q Consensus 203 ~s~~~y~R~-~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~ 281 (410)
+..++..|. ++-+++..=--|+|+|+|++..+|..++++. .+.-+.+..|+.....
T Consensus 48 ~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~--~~~Di~~~~d~~~~~~--------------------- 104 (212)
T PF03407_consen 48 FQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFEN--PDADILFSSDGWDGTN--------------------- 104 (212)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhcc--CCCceEEecCCCcccc---------------------
Confidence 334555555 3345665334599999999999999999921 3333334445432100
Q ss_pred CCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccC--------CeeecCCccccccc
Q 015279 282 LDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKG--------HVHPIDPSWHLLGL 353 (410)
Q Consensus 282 ~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~--------~~~~L~~~wN~~~l 353 (410)
.......+|+|++.+.-..-- .+-+.+|++... +....+||.+++ .++.. ++..||...-..|.
T Consensus 105 ~~~~~~~~n~G~~~~r~t~~~----~~~~~~w~~~~~-~~~~~~DQ~~~n---~~l~~~~~~~~~~~~~~L~~~~f~~g~ 176 (212)
T PF03407_consen 105 SDRNGNLVNTGFYYFRPTPRT----IAFLEDWLERMA-ESPGCWDQQAFN---ELLREQAARYGGLRVRFLPPSLFPNGH 176 (212)
T ss_pred hhhcCCccccceEEEecCHHH----HHHHHHHHHHHH-hCCCcchHHHHH---HHHHhcccCCcCcEEEEeCHHHeeccc
Confidence 011122459999998665421 122233333322 123446999984 44433 35666664333332
Q ss_pred CCCCc-cch-hh--hCCceEEEeeCC
Q 015279 354 GYQNK-TSI-ES--VKKAAVIHYNGQ 375 (410)
Q Consensus 354 ~~~~~-~~~-~~--~~~~~IIHy~G~ 375 (410)
+|-.. ... .. ...|.+||.++.
T Consensus 177 ~~f~~~~~~~~~~~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 177 GYFCQSRDWAWVPTKNKPYIVHANCC 202 (212)
T ss_pred cceeecchhhhhccccccceEEEcCC
Confidence 22111 111 11 357999999863
No 25
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=91.69 E-value=0.87 Score=46.54 Aligned_cols=165 Identities=16% Similarity=0.176 Sum_probs=85.1
Q ss_pred CCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCCCCC--cceeeecccCCchhhhhhhhhcccCCCchh
Q 015279 200 PKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGK--VNGAVETCRGEDEWVMSKRFRNYFNFSHPL 277 (410)
Q Consensus 200 ~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~--~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~ 277 (410)
+..|+...+.|=.+- -.|+.+-+-|||+|.||..-- ++++++.+ ..-.+. .+...+
T Consensus 179 p~~WaKlpaLR~aM~-~~PeaEWiWWLDsDALImNms---felPlery~~~NlVih------------g~~~~l------ 236 (429)
T PLN03182 179 AGFWAKLPLLRKLML-AHPEVEWIWWMDSDALFTDMT---FEIPLEKYEGYNLVIH------------GWDELV------ 236 (429)
T ss_pred CcchhHHHHHHHHHH-HCCCceEEEEecCCceeecCC---CCCCHhHcCCcCeeec------------cchhhh------
Confidence 567777777776553 368999999999999998621 22333211 011111 001100
Q ss_pred hhccCCCCCCCceeeEEEEechHHhhhcHH----------------HHHHHHHHHhccCCccccCcCCCcHHHHhccCC-
Q 015279 278 IAKHLDPEECAWAYGMNIFDLRAWRKTNIR----------------ETYHSWLKENLKSNLTMWKLGTLPPALIAFKGH- 340 (410)
Q Consensus 278 i~~~~~~~~~yfNsGVllinL~~wR~~~i~----------------~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~~- 340 (410)
....+-...|+|+++|-.-.|--.=+. +.+..-++.. ..+..-||.+|--.++.-..+
T Consensus 237 ---~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~r--p~~eaDDQSAlvyLl~~~~~~w 311 (429)
T PLN03182 237 ---YDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGR--PAFEADDQSALVYLLLTQRERW 311 (429)
T ss_pred ---eeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCC--CCCCcccHHHHHHHHHhcchhh
Confidence 011233578999999988888643211 1111111111 245567888874333222222
Q ss_pred --eeecCCccccccc------CCCCc-----cchhhhCCceEEEeeCCCCCCccCCCCCCHHHHH
Q 015279 341 --VHPIDPSWHLLGL------GYQNK-----TSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWA 392 (410)
Q Consensus 341 --~~~L~~~wN~~~l------~~~~~-----~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~ 392 (410)
-..|...|-+.|. .|+.. ...-.-+-|-|.||+| .||....+......=|.
T Consensus 312 ~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~~y~~~~C~~ 375 (429)
T PLN03182 312 GDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYGDYPVERCLK 375 (429)
T ss_pred ccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCCCcCHHHHHH
Confidence 2345555555442 11110 0111224589999999 89997654323333343
No 26
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=90.83 E-value=0.14 Score=48.98 Aligned_cols=150 Identities=15% Similarity=0.141 Sum_probs=12.6
Q ss_pred CCCCCeEEEEecceeeccCChhhhhcCCCCCcce--eeecccCCchhhhhhhhhcccCCCchh-hhccCCCCCCCceeeE
Q 015279 217 FPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNG--AVETCRGEDEWVMSKRFRNYFNFSHPL-IAKHLDPEECAWAYGM 293 (410)
Q Consensus 217 lp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~ia--Av~d~~~~~~~~~~~~~~~~l~~s~p~-i~~~~~~~~~yfNsGV 293 (410)
+|+.+-|+|||+|.+|..-=-+|-+.=|+...+- ...+.... ......+..+...+. +..-...+..++|+|+
T Consensus 74 ~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~----p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGs 149 (239)
T PF05637_consen 74 YPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIV----PPDSIIKTYSVIDGNDIHLIITQDWNGLNTGS 149 (239)
T ss_dssp -TT-SEEEEE-TTEEE----------------------------------------------------------------
T ss_pred CCCCCEEEEEcCCeEEEecccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccc
Confidence 4889999999999999754444332212111100 00110000 000111111111110 0001234567899999
Q ss_pred EEEechHHhhhcHHHHHHHHHHHhccC-CccccCcCCCcHHH---HhccCCeeecCCcc-cccccCCCCccchhhhCCce
Q 015279 294 NIFDLRAWRKTNIRETYHSWLKENLKS-NLTMWKLGTLPPAL---IAFKGHVHPIDPSW-HLLGLGYQNKTSIESVKKAA 368 (410)
Q Consensus 294 llinL~~wR~~~i~~~~~~~~~~~~~~-~~~~~dqd~L~~~n---~~f~~~~~~L~~~w-N~~~l~~~~~~~~~~~~~~~ 368 (410)
+++--..|-+. +.+...+........ .....||.+|--.+ -.+.+++..+|.+| |-+.-+- ......+..-
T Consensus 150 FliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~~~---~~~~~~~GDf 225 (239)
T PF05637_consen 150 FLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPEDE---CNYQYKEGDF 225 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccc
Confidence 99988888763 223322222211111 12357888873211 12345566666655 3322110 0122334568
Q ss_pred EEEeeC
Q 015279 369 VIHYNG 374 (410)
Q Consensus 369 IIHy~G 374 (410)
|+||.|
T Consensus 226 vvhfaG 231 (239)
T PF05637_consen 226 VVHFAG 231 (239)
T ss_dssp ------
T ss_pred cccccc
Confidence 999999
No 27
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=88.04 E-value=1.5 Score=42.59 Aligned_cols=32 Identities=31% Similarity=0.525 Sum_probs=27.4
Q ss_pred hhcccCCCCCeEEEEecceeeccCChhhhhcC
Q 015279 212 YIPELFPHLDKVVFLDDDIVIQRDLSPLWEID 243 (410)
Q Consensus 212 ~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~d 243 (410)
.+.-++...+.||+||+|.|...|++.||+.+
T Consensus 83 ~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 83 WLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred hhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 34456777999999999999999999999864
No 28
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=77.12 E-value=1.2 Score=45.15 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=23.4
Q ss_pred hhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhh
Q 015279 205 LLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWE 241 (410)
Q Consensus 205 ~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~ 241 (410)
..+..|+.+=.=+-. ||||+||||.+++++|=+
T Consensus 227 lSdl~RLA~LyKYGG----vYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 227 LSDLSRLALLYKYGG----VYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHHHHHHHhCC----EEeeccEEEecccccccc
Confidence 355667755222222 799999999999999854
No 29
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=72.50 E-value=91 Score=30.43 Aligned_cols=118 Identities=11% Similarity=0.103 Sum_probs=64.5
Q ss_pred cCCCCCeEEEEecceeeccCCh-hhhhcCCCCCcceeeecccCCc---hhhhhhh--hhcccCCCchhhhccCCCCCCCc
Q 015279 216 LFPHLDKVVFLDDDIVIQRDLS-PLWEIDLGGKVNGAVETCRGED---EWVMSKR--FRNYFNFSHPLIAKHLDPEECAW 289 (410)
Q Consensus 216 llp~~~KvLYLD~DvIV~~DL~-eL~~~dl~g~~iaAv~d~~~~~---~~~~~~~--~~~~l~~s~p~i~~~~~~~~~yf 289 (410)
++.++|-+.++|+|+++++.+. |. | |..+|...--.... .....+| -..|+. ++.+..|+
T Consensus 120 ~~~e~DYlF~~dvd~~F~~~ig~E~----L-g~lva~lHp~~y~~~~~~fpYERrp~S~AyIp---------~~eGdfYy 185 (271)
T cd02515 120 IGHEVDYLFCMDVDMVFQGPFGVET----L-GDSVAQLHPWWYGKPRKQFPYERRPSSAAYIP---------EGEGDFYY 185 (271)
T ss_pred hcccCCEEEEeeCCceEeecCCHHH----h-hhhheecChhhhcCCCCCCCCcCCCCcccccc---------CCCCCeEE
Confidence 4557999999999999999987 22 2 23444443211100 0000001 112222 33456688
Q ss_pred eeeEEEEechHHhhhcHHHHHHHHHHHhccCCc--cccCcCCCcHHHHhc-cCC-eeecCCcccccc
Q 015279 290 AYGMNIFDLRAWRKTNIRETYHSWLKENLKSNL--TMWKLGTLPPALIAF-KGH-VHPIDPSWHLLG 352 (410)
Q Consensus 290 NsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~--~~~dqd~L~~~n~~f-~~~-~~~L~~~wN~~~ 352 (410)
.+|++==-.++.. ++++.|..-+......++ ...|..-| |-.| ..+ ++.|++.|..-.
T Consensus 186 ~Ga~~GG~~~~vl--~l~~~c~~~i~~D~~n~I~A~wHDESHL---NkYf~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 186 HGAVFGGSVEEVY--RLTRACHEGILADKANGIEARWHDESHL---NKYFLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred eeeecCccHHHHH--HHHHHHHHHHHHHHhCCceEEeecHhHh---HHHHhhCCCCeecChhhcCCc
Confidence 8887632222222 245566655554332233 56788888 4433 444 899999988754
No 30
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=70.57 E-value=4.5 Score=41.16 Aligned_cols=152 Identities=16% Similarity=0.137 Sum_probs=79.5
Q ss_pred CCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhh--h--hhh----hhcccCCCchhhhccCCC--CC
Q 015279 217 FPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWV--M--SKR----FRNYFNFSHPLIAKHLDP--EE 286 (410)
Q Consensus 217 lp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~--~--~~~----~~~~l~~s~p~i~~~~~~--~~ 286 (410)
|.+.++++|+|+|+-+..+...++++... .-.+...+.....+. . ... ...-+.|.+. ..-++. ..
T Consensus 122 ~~~~~a~i~~~~~i~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~--~~~~~~~~l~ 197 (369)
T KOG1950|consen 122 LIEDGAAIYLVDDIQRFRNDDANFDVPNE--LNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNW--PDLFATNILP 197 (369)
T ss_pred eeccCceEEEecchhhccCccccccccch--hcccccceeeecccccceEEeccchhcCChhhhhhhc--hhhccCCCcc
Confidence 55689999999999999999999877543 122233332211000 0 000 0010011100 011222 24
Q ss_pred CCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccCCeeecCCccccc-ccCCCCc--cchhh
Q 015279 287 CAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLL-GLGYQNK--TSIES 363 (410)
Q Consensus 287 ~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~-~l~~~~~--~~~~~ 363 (410)
+.||+|++++-...-.-.. +.+.... .......+||++ +..|...-.+.++..|.. +.....+ .+...
T Consensus 198 ~~~n~~~~v~~ps~~~~~~----~~~~~~~--~~~~~~~~q~~l---~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~ 268 (369)
T KOG1950|consen 198 LIFNSGLLVFEPSLCNYKD----LMEFSEE--FESYNGADQGFL---HLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSR 268 (369)
T ss_pred ceeccCccccCCCccchhh----HHHhhcc--cCCCCCccchhh---HHHhhcccCCCcccccccccccccCccccchhh
Confidence 5599999998655422211 2222222 124567899999 666765544778777753 3333222 12222
Q ss_pred hC--CceEEEeeCCCCCCcc
Q 015279 364 VK--KAAVIHYNGQSKPWLQ 381 (410)
Q Consensus 364 ~~--~~~IIHy~G~~KPW~~ 381 (410)
.. .-..+||.|..|||..
T Consensus 269 ~~~~~~~~~~y~~~~~p~~~ 288 (369)
T KOG1950|consen 269 ASSVLRYALHYLGANKPELC 288 (369)
T ss_pred cccccchhhhccccCCCCcc
Confidence 22 2345699997688765
No 31
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=52.43 E-value=7.7 Score=31.66 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=27.3
Q ss_pred CcchhhHHHHhhcccCCCCCeEEEEecceeeccCC-hhhh
Q 015279 202 YISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDL-SPLW 240 (410)
Q Consensus 202 ~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL-~eL~ 240 (410)
+.....++|+.+--..-. ||+|.|+++.+++ +.+-
T Consensus 62 ~~~~sD~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 62 YAHKSDLLRYLVLYKYGG----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred hHHHHHHHHHHHHHHcCc----EEEeCccccCcchhhhhh
Confidence 344678899988666655 8999999999999 6543
No 32
>PLN03181 glycosyltransferase; Provisional
Probab=45.82 E-value=26 Score=36.18 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=25.7
Q ss_pred CCCcchhhHHHHhhcccCCCCCeEEEEecceeeccC
Q 015279 200 PKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRD 235 (410)
Q Consensus 200 ~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~D 235 (410)
+..|+.....|=.+ .-+|+.+-+-|||+|+||..-
T Consensus 180 p~~WaKipalRaAM-~a~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 180 NSYWAKLPVVRAAM-LAHPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred chhhhHHHHHHHHH-HHCCCceEEEEecCCceeecC
Confidence 45666666666333 238899999999999999855
No 33
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=44.79 E-value=2.1e+02 Score=28.90 Aligned_cols=125 Identities=11% Similarity=0.063 Sum_probs=57.3
Q ss_pred cccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeE
Q 015279 214 PELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGM 293 (410)
Q Consensus 214 p~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGV 293 (410)
-.++.++|-+..+|+|+++++++.. +.=|..+|...--.-..... .-.|.+.- -|...| .++.+..|+.+|+
T Consensus 183 ~~~~~EvDYLFc~dvd~~F~~~vGv----E~Lg~lva~LHp~~y~~~~~-~FpYERrp-~S~AyI--p~~eGDfYY~ga~ 254 (337)
T PF03414_consen 183 QHIQHEVDYLFCMDVDMVFQDHVGV----EILGDLVATLHPWFYFKPRE-SFPYERRP-KSQAYI--PYGEGDFYYHGAF 254 (337)
T ss_dssp HCHHHH-SEEEEEESSEEE-S-B-G----GG-SSEEEEESTTTTTSTGG-GS--B-ST-TSTTB----TT--S--EECCE
T ss_pred HHHhhcCCEEEEEecceEEecccCH----HHHHHHHHHhCHHHHCCChh-hCccccCc-cccccc--cCCCCCeEEecee
Confidence 3456679999999999999998874 11155555554322110000 00000000 011111 1344567888887
Q ss_pred EEEechHHhhhcHHHHHHHHHHHhccCC--ccccCcCCCcHHHHhc--cCCeeecCCccccc
Q 015279 294 NIFDLRAWRKTNIRETYHSWLKENLKSN--LTMWKLGTLPPALIAF--KGHVHPIDPSWHLL 351 (410)
Q Consensus 294 llinL~~wR~~~i~~~~~~~~~~~~~~~--~~~~dqd~L~~~n~~f--~~~~~~L~~~wN~~ 351 (410)
+==-..+.. ++++.|..-+.+....+ ..+.|..-| |-.| +.-++.|++.|.+-
T Consensus 255 fGGt~~~vl--~Lt~~c~~~i~~D~~n~I~A~WhDESHL---NKYfl~~KPtKvLSPEY~Wd 311 (337)
T PF03414_consen 255 FGGTVEEVL--RLTEACHQGIMQDKANGIEALWHDESHL---NKYFLYHKPTKVLSPEYCWD 311 (337)
T ss_dssp EEECHHHHH--HHHHHHHHHHHHHHHTT---TTCHHHHH---HHHHHHS--SEEE-GGGSBS
T ss_pred cCCcHHHHH--HHHHHHHHHHHhhhhcCceEeccchhhh---HHHHhhCCCceecCHHHccC
Confidence 643333332 35666666665432212 234566667 5433 44588999998874
No 34
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=44.20 E-value=43 Score=34.91 Aligned_cols=41 Identities=22% Similarity=0.505 Sum_probs=32.7
Q ss_pred CcchhhHHHHhhcccCC--CCCeEEEEecceeeccCChhhhhc
Q 015279 202 YISLLNHLRIYIPELFP--HLDKVVFLDDDIVIQRDLSPLWEI 242 (410)
Q Consensus 202 ~~s~~~y~R~~lp~llp--~~~KvLYLD~DvIV~~DL~eL~~~ 242 (410)
|..++.|+|.-|-.+|. .+++||.|.+|+.|--|.=+-|+.
T Consensus 172 y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 172 YYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 56788999999988886 489999999999999998776654
No 35
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=41.90 E-value=15 Score=34.50 Aligned_cols=24 Identities=33% Similarity=0.621 Sum_probs=19.8
Q ss_pred hhcccCCCCCeEEEEecceeeccC
Q 015279 212 YIPELFPHLDKVVFLDDDIVIQRD 235 (410)
Q Consensus 212 ~lp~llp~~~KvLYLD~DvIV~~D 235 (410)
.+..++|+++-||+||+||.|...
T Consensus 34 vva~~L~~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 34 VVAKILPEYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHHhccCCEEEEEcCCceeecC
Confidence 345678999999999999998654
No 36
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=40.99 E-value=62 Score=32.58 Aligned_cols=40 Identities=23% Similarity=0.453 Sum_probs=30.3
Q ss_pred CcchhhHHHHhhcccCCC--CCeEEEEecceeeccCChhhhh
Q 015279 202 YISLLNHLRIYIPELFPH--LDKVVFLDDDIVIQRDLSPLWE 241 (410)
Q Consensus 202 ~~s~~~y~R~~lp~llp~--~~KvLYLD~DvIV~~DL~eL~~ 241 (410)
|..++.+++.-+-.+|.. +++||.||+|+++--|.=+.++
T Consensus 78 y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 78 YYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 456677777777777753 8999999999999999544443
No 37
>PRK15384 type III secretion system protein; Provisional
Probab=33.71 E-value=20 Score=34.39 Aligned_cols=23 Identities=26% Similarity=0.585 Sum_probs=19.9
Q ss_pred CeEEEEecceeeccCChhhhhcC
Q 015279 221 DKVVFLDDDIVIQRDLSPLWEID 243 (410)
Q Consensus 221 ~KvLYLD~DvIV~~DL~eL~~~d 243 (410)
+-+||||+|+|+.+-|--|+.-|
T Consensus 217 ~GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred CceEEeeccceeecccccEEcCC
Confidence 45899999999999999988554
No 38
>PRK15383 type III secretion system protein; Provisional
Probab=33.49 E-value=21 Score=34.25 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=20.0
Q ss_pred CeEEEEecceeeccCChhhhhcC
Q 015279 221 DKVVFLDDDIVIQRDLSPLWEID 243 (410)
Q Consensus 221 ~KvLYLD~DvIV~~DL~eL~~~d 243 (410)
+-+||||+|+|+.+-|--|+.-|
T Consensus 220 ~GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 45899999999999999988554
No 39
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=33.28 E-value=21 Score=34.20 Aligned_cols=31 Identities=29% Similarity=0.619 Sum_probs=23.5
Q ss_pred CeEEEEecceeeccCChhhhhcCCCCCcceeeecc
Q 015279 221 DKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETC 255 (410)
Q Consensus 221 ~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~ 255 (410)
+-+||||+|+|+.+-|--|+.-| | ||+-.||
T Consensus 212 ~GCIYLD~DMilT~KLG~ly~PD--G--IavhV~r 242 (326)
T PRK15382 212 EGCIYLDADMIITDKLGVLYAPD--G--IAVHVDC 242 (326)
T ss_pred CceEEeecceeeecccccEEcCC--c--eEEEEEe
Confidence 55899999999999999988554 2 4444444
No 40
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=28.99 E-value=94 Score=29.07 Aligned_cols=24 Identities=17% Similarity=0.401 Sum_probs=19.8
Q ss_pred CCCeEEEEecceeeccC-Chhhhhc
Q 015279 219 HLDKVVFLDDDIVIQRD-LSPLWEI 242 (410)
Q Consensus 219 ~~~KvLYLD~DvIV~~D-L~eL~~~ 242 (410)
..+=|+.+|+|+++..| |..+...
T Consensus 73 ~~e~i~~~DaD~~~~~~~l~~l~~~ 97 (244)
T cd04190 73 DPEFILLVDADTKFDPDSIVQLYKA 97 (244)
T ss_pred CCCEEEEECCCCcCCHhHHHHHHHH
Confidence 57899999999999988 5666643
No 41
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=26.77 E-value=71 Score=32.50 Aligned_cols=180 Identities=14% Similarity=0.130 Sum_probs=86.6
Q ss_pred CCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCCCCC--cceeee-cccCCchhhhhhhhhcccCCCch
Q 015279 200 PKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGK--VNGAVE-TCRGEDEWVMSKRFRNYFNFSHP 276 (410)
Q Consensus 200 ~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~--~iaAv~-d~~~~~~~~~~~~~~~~l~~s~p 276 (410)
+..|+.+-..|=-+- =+|+.+-|=+||.|.++..---+|=+.-++.. ...+-. |... +...+ .-.+..+.|
T Consensus 157 ~~~W~KiP~Ir~tM~-kyP~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~---~~~~n--~~~~~~~~~ 230 (364)
T KOG4748|consen 157 PGVWAKLPAIRQTML-KYPDAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKS---INPLN--IFRLRPRTP 230 (364)
T ss_pred cchhHHhHHHHHHHH-HCCCCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccc---cccCC--ccccccccc
Confidence 456666665554332 26899999999999999754444433323321 112222 1110 00000 000001111
Q ss_pred hh------hccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhc--cCCccccCcCCCcHH---HHhccCCeeecC
Q 015279 277 LI------AKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENL--KSNLTMWKLGTLPPA---LIAFKGHVHPID 345 (410)
Q Consensus 277 ~i------~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~--~~~~~~~dqd~L~~~---n~~f~~~~~~L~ 345 (410)
.. .--+..+...+|+|=+||--.+|-+ -++++..+-. .......+|+++--+ .-...+.|..|+
T Consensus 231 ~~d~~~~~~~ii~qD~nG~naGSfLirns~~~~-----~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp 305 (364)
T KOG4748|consen 231 SLDDLEDIAFIIPQDCNGINAGSFLIRNSEWGR-----LLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILP 305 (364)
T ss_pred cccchhhhceecccCCCCccccceEEecCccch-----hHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeecc
Confidence 10 0013345667999999996555433 2333222100 001222345444211 122356677777
Q ss_pred Ccc-cccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhch
Q 015279 346 PSW-HLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSN 399 (410)
Q Consensus 346 ~~w-N~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~ 399 (410)
.++ |.+.-|- ......+.+-++||.| . |.. ....+.|.+|.+..+
T Consensus 306 ~r~ins~~~~~---~~~g~~egdlvvhFaG-C--~~~---~~C~~~~~~y~~~~~ 351 (364)
T KOG4748|consen 306 LRYINSYPNGA---PGYGYEEGDLVVHFAG-C--YVR---NRCLEEMEKYFNLID 351 (364)
T ss_pred HHHHhcCCCCC---CCCccccCCeEEEecc-c--ccH---hHHHHHHHHHHHHHH
Confidence 766 5433211 0122335688999999 3 433 345788888876544
No 42
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=21.86 E-value=38 Score=33.85 Aligned_cols=22 Identities=23% Similarity=0.555 Sum_probs=16.7
Q ss_pred CCCCCCCceeeEEEEechHHhh
Q 015279 282 LDPEECAWAYGMNIFDLRAWRK 303 (410)
Q Consensus 282 ~~~~~~yfNsGVllinL~~wR~ 303 (410)
+....+||||||.+|.-..+.+
T Consensus 187 v~sG~y~WNSGmF~Fra~~~l~ 208 (333)
T COG0836 187 VESGEYLWNSGMFLFRASVFLE 208 (333)
T ss_pred HHcCceEeeccceEEEHHHHHH
Confidence 4456789999999998665544
No 43
>PF09006 Surfac_D-trimer: Lung surfactant protein D coiled-coil trimerisation; InterPro: IPR015097 This domain is found in the SFTPD family, which includes lung surfactant protein D (SFTPD), conglutinin, collectin-43 and collectin-46. It forms a triple-helical parallel coiled coil, and mediates trimerisation of the protein []. ; PDB: 4DN8_A 3G84_A 2RIE_C 3IKR_B 1B08_A 2GGX_B 2OS9_C 2ORK_B 1PWB_A 2RIA_C ....
Probab=21.56 E-value=2.5e+02 Score=19.82 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 015279 13 FMLRAMMEKFEREIRESKFAELMNKHFAASSIPKG 47 (410)
Q Consensus 13 ~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~ 47 (410)
.-||+-+.++|.|++. -|++|...=-+.-+|.+
T Consensus 2 ~aLrqQv~aL~~qv~~--Lq~~fs~yKKa~lFp~G 34 (46)
T PF09006_consen 2 NALRQQVEALQGQVQR--LQAAFSQYKKAELFPNG 34 (46)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHTTTE
T ss_pred hHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCc
Confidence 4689999999999983 45555544344444443
Done!