Query 015279
Match_columns 410
No_of_seqs 301 out of 1310
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 09:49:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015279.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015279hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 100.0 1.1E-48 3.8E-53 378.8 16.6 257 83-402 5-275 (276)
2 1g9r_A Glycosyl transferase; a 100.0 1.7E-43 5.9E-48 347.8 16.0 249 84-395 1-268 (311)
3 1ll2_A Glycogenin-1; protein-s 100.0 2.3E-28 8E-33 242.3 14.2 225 83-396 4-254 (333)
4 3u2u_A Glycogenin-1, GN-1, GN1 99.9 6.3E-27 2.2E-31 224.4 11.1 136 205-382 82-224 (263)
5 1o7q_A N-acetyllactosaminide a 74.5 38 0.0013 32.0 12.1 127 214-351 133-261 (289)
6 3ioh_A Histo-blood group ABO s 58.6 92 0.0031 29.5 11.4 124 215-351 143-270 (298)
7 1dip_A Delta-sleep-inducing pe 21.0 1.3E+02 0.0043 22.4 4.2 40 13-55 18-57 (78)
8 2akf_A Coronin-1A; coiled coil 17.6 1.7E+02 0.0057 17.7 3.5 19 9-27 12-30 (32)
9 1fo8_A Alpha-1,3-mannosyl-glyc 14.6 74 0.0025 30.7 2.3 39 204-242 82-122 (343)
10 2oqq_A Transcription factor HY 14.0 2.9E+02 0.0098 18.2 5.1 33 7-39 7-39 (42)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=1.1e-48 Score=378.85 Aligned_cols=257 Identities=15% Similarity=0.224 Sum_probs=183.1
Q ss_pred ccEEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 83 YHHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 83 ~ihIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
.||||+++|+.| +++|+|+|++.|+++ ++++|||++++++.+..+....+-+..+..|++..+
T Consensus 5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~-------------- 69 (276)
T 3tzt_A 5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRA-------------- 69 (276)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEEC--------------
T ss_pred eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEe--------------
Confidence 489999999988 799999999999985 679999999999877644322110001112221111
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccC-CCCCcchhhHHHHhhcccCC-CCCeEEEEecceeeccCChh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQAR-SPKYISLLNHLRIYIPELFP-HLDKVVFLDDDIVIQRDLSP 238 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~s~~~y~R~~lp~llp-~~~KvLYLD~DvIV~~DL~e 238 (410)
+++ .++.. ..+++|..+|+||++|+++| +++||||||+|+||++||++
T Consensus 70 --------------------------~~~----~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~ 119 (276)
T 3tzt_A 70 --------------------------TDD----LFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDD 119 (276)
T ss_dssp --------------------------C-----------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHH
T ss_pred --------------------------CHH----HHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHH
Confidence 000 11111 23578999999999999999 59999999999999999999
Q ss_pred hhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhc
Q 015279 239 LWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENL 318 (410)
Q Consensus 239 L~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~ 318 (410)
||++|++|+++|||+||..... .+.++ ..+++...+|||||||||||++||+.+++++++++++++.
T Consensus 120 L~~~dl~~~~~aav~d~~~~~~-------~~~~~------~~~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~ 186 (276)
T 3tzt_A 120 LLRTDISDYILAAASHTGKTDM-------ANNVN------RIRLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNH 186 (276)
T ss_dssp HHTCCCTTSSEEEEEC---------------------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC-
T ss_pred HhhcCCCCCeEEEEEecccchH-------HHHHH------HhcCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcc
Confidence 9999999999999999975311 11111 1234444699999999999999999999999999999864
Q ss_pred cCCccccCcCCCcHHHHhccCCeeecCC-cccccccCCCC--------ccch-hhhCCceEEEeeCCCCCCccCCCCCCH
Q 015279 319 KSNLTMWKLGTLPPALIAFKGHVHPIDP-SWHLLGLGYQN--------KTSI-ESVKKAAVIHYNGQSKPWLQIGFEHLR 388 (410)
Q Consensus 319 ~~~~~~~dqd~L~~~n~~f~~~~~~L~~-~wN~~~l~~~~--------~~~~-~~~~~~~IIHy~G~~KPW~~~~~~~~~ 388 (410)
..+.++|||+| |.+|+++++.||. +||+++. +.. ..+. +..++|+||||+|..|||...+.++++
T Consensus 187 -~~~~~~DQd~L---N~~f~~~~~~Lp~~~wN~~~~-~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~ 261 (276)
T 3tzt_A 187 -MNLLLPDQDIL---NAMYGDRIYPLDDLIYNYDAR-NYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRNKFT 261 (276)
T ss_dssp --------CHHH---HHHHGGGEEEEEHHHHSEETT-CHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCCSTTH
T ss_pred -ccccCCChhHH---HHHHhCCEEECCchheeeecc-cchhhhccccchhhhhhhccCCeEEEECCCCCCcCCCCCCchH
Confidence 35678999999 8999999999999 9999862 210 1112 356789999999999999999889999
Q ss_pred HHHHHHHhhchhhh
Q 015279 389 PFWAKYVNYSNDFV 402 (410)
Q Consensus 389 ~~W~~Y~~~~~~~l 402 (410)
++||+|++..+++|
T Consensus 262 ~~w~~Y~~~~~~~~ 275 (276)
T 3tzt_A 262 SLYKHYMSLTKRYL 275 (276)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999987
No 2
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=1.7e-43 Score=347.79 Aligned_cols=249 Identities=21% Similarity=0.332 Sum_probs=186.6
Q ss_pred cEEEEEeCCCc--chhhhHHHH-HhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 84 HHFILSTDNIL--AASVVVTSA-VQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 84 ihIv~~sDn~l--~~~V~I~Si-l~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
||||+++|+.| +++|+|+|+ +.|++ .+++|||++++++.+..+..-.+-...+..|++..+
T Consensus 1 m~I~~~~d~~Y~~~~~vli~Sl~l~~~~--~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~-------------- 64 (311)
T 1g9r_A 1 MDIVFAADDNYAAYLCVAAKSVEAAHPD--TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDV-------------- 64 (311)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTCTT--SCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEEC--------------
T ss_pred CeEEEECCHhHHHHHHHHHHHHHHHcCC--CCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEc--------------
Confidence 69999999987 699999999 99874 569999999999877644222110000111111100
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCC--CCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARS--PKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSP 238 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~e 238 (410)
++. .++..+ .+++|..+|+||++|++||+++||||||+|+||++||++
T Consensus 65 --------------------------~~~----~~~~~~~~~~~~s~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~e 114 (311)
T 1g9r_A 65 --------------------------NPE----DFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTP 114 (311)
T ss_dssp --------------------------CGG----GGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHH
T ss_pred --------------------------CHH----HHhcCccccccCCHHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHH
Confidence 000 111111 367899999999999999999999999999999999999
Q ss_pred hhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhc
Q 015279 239 LWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENL 318 (410)
Q Consensus 239 L~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~ 318 (410)
||++|++|+++|||+||.... ...+...+ ++.+..+||||||||||+++||+.++++++++|++++.
T Consensus 115 L~~~~l~~~~~aav~d~~~~~----~~~~~~~~---------~~~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~ 181 (311)
T 1g9r_A 115 LWDTDLGDNWLGASIDLFVER----QEGYKQKI---------GMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYK 181 (311)
T ss_dssp HHTCCCTTCSEEEEECHHHHT----STTHHHHT---------TCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHT
T ss_pred HhccCCCCcEEEEEeccchhh----hHHHHHhc---------CCCCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhcc
Confidence 999999999999999985310 01122222 34456789999999999999999999999999999865
Q ss_pred cCCccccCcCCCcHHHHhccCCeeecCCcccccccCCC------Ccc-------ch-hhhCCceEEEeeCCCCCCccCCC
Q 015279 319 KSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQ------NKT-------SI-ESVKKAAVIHYNGQSKPWLQIGF 384 (410)
Q Consensus 319 ~~~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~------~~~-------~~-~~~~~~~IIHy~G~~KPW~~~~~ 384 (410)
....+.|||+| |.+|.++++.||.+||++..++. ... .. ...++++||||+|+.|||...+.
T Consensus 182 -~~~~~~DQd~l---N~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~ 257 (311)
T 1g9r_A 182 -DVMQYQDQDIL---NGLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCT 257 (311)
T ss_dssp -TTCSSHHHHHH---HHHHTTSEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSSSCC
T ss_pred -CcCccCCcCHH---HHHHcCCEEEcChhhccCcchhhHHhhhcccccchhhhhHHhhccCCCEEEEeCCcCCCCCCCCC
Confidence 35778999998 89999999999999999753211 000 01 22357899999999999998887
Q ss_pred CCCHHHHHHHH
Q 015279 385 EHLRPFWAKYV 395 (410)
Q Consensus 385 ~~~~~~W~~Y~ 395 (410)
++..++|..+.
T Consensus 258 ~~~~~~~~~~~ 268 (311)
T 1g9r_A 258 AWGAERFTELA 268 (311)
T ss_dssp STTTHHHHHHH
T ss_pred CccHHHHHHHH
Confidence 77777776665
No 3
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.95 E-value=2.3e-28 Score=242.26 Aligned_cols=225 Identities=16% Similarity=0.186 Sum_probs=153.1
Q ss_pred ccEEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279 83 YHHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL 160 (410)
Q Consensus 83 ~ihIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l 160 (410)
...|++++|+.| ++.|++.|+..|+++ ..++| +++++++.+..+..-.+. . .|+.++...
T Consensus 4 ~a~vt~~~d~~Yl~~a~vl~~SL~~~~s~-~~l~v-lv~~~is~~~~~~L~~~~----~--~v~~v~~l~---------- 65 (333)
T 1ll2_A 4 QAFVTLTTNDAYAKGALVLGSSLKQHRTS-RRLAV-LTTPQVSDTMRKALEIVF----D--EVITVDILD---------- 65 (333)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHTTCC-SEEEE-EECTTSCHHHHHHHHHHC----S--EEEECCTTS----------
T ss_pred eEEEEEEeCHHHHHHHHHHHHHHHHhCCC-CCEEE-EEcCCCCHHHHHHHHHhC----C--EEEEEeecC----------
Confidence 568889999877 688899999999864 44666 677788776544322210 0 111111000
Q ss_pred HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279 161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240 (410)
Q Consensus 161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~ 240 (410)
. . .+ ..+.... ...+..+|+||++|++ ++++||||||+|+||++||++||
T Consensus 66 ---------------~--------~-~~----~~~~~~~-~~~~~~t~~Kl~i~~l-~~ydrvlYLDaD~lv~~di~eLf 115 (333)
T 1ll2_A 66 ---------------S--------G-DS----AHLTLMK-RPELGVTLTKLHCWSL-TQYSKCVFMDADTLVLANIDDLF 115 (333)
T ss_dssp ---------------T--------T-ST----THHHHHH-CGGGHHHHHHGGGGGC-TTCSEEEEECTTEEECSCCGGGG
T ss_pred ---------------C--------c-ch----hhccccc-ccchHHHHHHHHHhHh-cCCCeEEEEeCCEEeccCHHHHh
Confidence 0 0 00 0011000 1124689999999996 78999999999999999999999
Q ss_pred hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS 320 (410)
Q Consensus 241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~ 320 (410)
+++ .+|||+|.+. .+||||||||||++. ...++++++++++ .
T Consensus 116 ~~~----~~aAv~d~~~----------------------------~~~fNsGvmlin~~~----~~~~~l~~~~~~~--~ 157 (333)
T 1ll2_A 116 ERE----ELSAAPDPGW----------------------------PDCFNSGVFVYQPSV----ETYNQLLHVASEQ--G 157 (333)
T ss_dssp GSC----SSEEEECSSS----------------------------TTSEEEEEEEECCCH----HHHHHHHHHHHHT--C
T ss_pred CCC----ceeEEecCCC----------------------------CcceeeeEEEEeCCH----HHHHHHHHHHHhc--C
Confidence 987 4788877421 148999999999863 3456777777764 2
Q ss_pred CccccCcCCCcHHHHhccCCe-----eecCCcccccccC-CCCccch-hhhCCceEEEeeCCCCCCccCCCC--------
Q 015279 321 NLTMWKLGTLPPALIAFKGHV-----HPIDPSWHLLGLG-YQNKTSI-ESVKKAAVIHYNGQSKPWLQIGFE-------- 385 (410)
Q Consensus 321 ~~~~~dqd~L~~~n~~f~~~~-----~~L~~~wN~~~l~-~~~~~~~-~~~~~~~IIHy~G~~KPW~~~~~~-------- 385 (410)
.+.++|||+| |.+|.+.+ ..||.+||+.... |...... ...++++||||+|..|||...+.+
T Consensus 158 ~~~~~DQ~~L---N~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~ 234 (333)
T 1ll2_A 158 SFDGGDQGLL---NTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGANAKVVHFLGQTKPWNYTYDTKTKSVRSE 234 (333)
T ss_dssp CTTSSHHHHH---HHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGGGCSEEECCSSCCGGGSCEETTTTEEC--
T ss_pred CCCCCCHHHH---HHHHHhhcccCccccCCcHHhcccccchhccHHHHhhcCCCEEEEECCCCCCCCCCCCCCccccccc
Confidence 5678999999 88888654 7999999997542 3221111 235789999999999999875322
Q ss_pred ---------CCHHHHHHHHh
Q 015279 386 ---------HLRPFWAKYVN 396 (410)
Q Consensus 386 ---------~~~~~W~~Y~~ 396 (410)
.+.+.||.+.+
T Consensus 235 ~~~~~~~~~~~~~~WW~~~~ 254 (333)
T 1ll2_A 235 GHDPTMTHPQFLNVWWDIFT 254 (333)
T ss_dssp ------CCHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHH
Confidence 24578998765
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=99.94 E-value=6.3e-27 Score=224.41 Aligned_cols=136 Identities=16% Similarity=0.192 Sum_probs=109.4
Q ss_pred hhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCC
Q 015279 205 LLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDP 284 (410)
Q Consensus 205 ~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~ 284 (410)
..+|.|++++++.+ ++||||||+|++|++||++||+++ .+|||+|.+.
T Consensus 82 ~~~~~kl~~~~l~~-~~~vlylD~D~~v~~~~~~Lf~~~----~~aA~~d~~~--------------------------- 129 (263)
T 3u2u_A 82 GVTLTKLHCWSLTQ-YSKCVFMDADTLVLANIDDLFDRE----ELSAAPDPGW--------------------------- 129 (263)
T ss_dssp GGGGGGGGGGGCTT-CSEEEEECTTEEECSCCGGGGGSC----SSEEEECTTS---------------------------
T ss_pred hHHhHHHHhccccC-cceEEEEcCCEeeccCHHHHhCCC----cceEeccCCC---------------------------
Confidence 46899999999875 999999999999999999999987 4788887421
Q ss_pred CCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCCccccCcCCCcHHHHhccC-----CeeecCCccccccc-CCCCc
Q 015279 285 EECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKG-----HVHPIDPSWHLLGL-GYQNK 358 (410)
Q Consensus 285 ~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~~~~~dqd~L~~~n~~f~~-----~~~~L~~~wN~~~l-~~~~~ 358 (410)
..||||||||||++. ++.+++++++++.. .+.++|||+| |.+|.+ +++.||.+||++.. .|...
T Consensus 130 -~~~fNsGv~li~p~~----~~~~~l~~~~~~~~--~~~~~DQd~L---N~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~ 199 (263)
T 3u2u_A 130 -PDCFNSGVFVYQPSV----ETYNQLLHLASEQG--SFDGGDQGIL---NTFFSSWATTDIRKHLPFIYNLSSISIYSYL 199 (263)
T ss_dssp -TTSEEEEEEEECCCH----HHHHHHHHHHHHHC--CTTSSHHHHH---HHHTTTTTTSCGGGBCCGGGSEEHHHHHSSH
T ss_pred -CccccCeEEEEcccH----HHHHHHHHHHHhcC--CCCcccHHHH---HHHhccccccCeeEeCCcccccccchhcccc
Confidence 148999999999863 56788888887642 5778999999 899987 78999999998642 33322
Q ss_pred cch-hhhCCceEEEeeCCCCCCccC
Q 015279 359 TSI-ESVKKAAVIHYNGQSKPWLQI 382 (410)
Q Consensus 359 ~~~-~~~~~~~IIHy~G~~KPW~~~ 382 (410)
... +..++++||||+|..|||...
T Consensus 200 ~~~~~~~~~~~IIHf~g~~KPW~~~ 224 (263)
T 3u2u_A 200 PAFKVFGASAKVVHFLGRVKPWNYT 224 (263)
T ss_dssp HHHHHHGGGCSEEECCSSSCGGGSE
T ss_pred HHHHhhcCCeEEEEECCCCcCCCCC
Confidence 122 345789999999999999874
No 5
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=74.48 E-value=38 Score=32.00 Aligned_cols=127 Identities=11% Similarity=0.061 Sum_probs=70.3
Q ss_pred cccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeE
Q 015279 214 PELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGM 293 (410)
Q Consensus 214 p~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGV 293 (410)
.+++.++|-+.++|+|+++++++..= .| |..+|...--.-.... ..-.|.+. .-|...| .++.+..|+.+|+
T Consensus 133 ~~~~~evDYLf~~dvd~~F~~~vG~E---~L-g~lv~~lHp~~y~~~~-~~fpYERr-p~S~AyI--p~~eGdfYY~Ga~ 204 (289)
T 1o7q_A 133 AHIQHEVDFLFCMDVDQVFQDKFGVE---TL-GESVAQLQAWWYKADP-NDFTYERR-KESAAYI--PFGEGDFYYHAAI 204 (289)
T ss_dssp HTHHHHCSEEEEECSSEEECSCBCGG---GC-SSEEEEECTTTTTSCG-GGSCCCCC-TTSTTCC--CTTCCSCCEEEEE
T ss_pred HHHhhcCCEEEEeeCCcEeeccCCHH---HH-HHHHHccCHHHhCCCC-CCCCCCCC-cCceeee--cCCCCCEEEEcee
Confidence 45566899999999999999988641 23 4555555432111000 00000000 0011111 2456788999998
Q ss_pred EEEechHHhhhcHHHHHHHHHHHhccCC--ccccCcCCCcHHHHhccCCeeecCCccccc
Q 015279 294 NIFDLRAWRKTNIRETYHSWLKENLKSN--LTMWKLGTLPPALIAFKGHVHPIDPSWHLL 351 (410)
Q Consensus 294 llinL~~wR~~~i~~~~~~~~~~~~~~~--~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~ 351 (410)
+==-..+-- ++++.|..-+.+....+ ..+.|..-||-- ...+..++.|++.|.+.
T Consensus 205 fGGt~~~vl--~l~~~c~~~i~~D~~n~I~A~wHDESHLNKY-f~~~KPtKvLSPEY~wd 261 (289)
T 1o7q_A 205 FGGTPTQVL--NITQECFKGILKDKKNDIEAQWHDESHLNKY-FLLNKPTKILSPEYCWD 261 (289)
T ss_dssp EEECHHHHH--HHHHHHHHHHHHHHHTTCCCTTTHHHHHHHH-HHHSCCSEEECGGGSBC
T ss_pred eCCcHHHHH--HHHHHHHHHHHHHHhCCeEEEecchhhhhHH-HhhcCCCEEECHHHCCC
Confidence 855444443 36667776665432212 245566667421 12355678899998874
No 6
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=58.63 E-value=92 Score=29.48 Aligned_cols=124 Identities=10% Similarity=0.054 Sum_probs=62.9
Q ss_pred ccCCCCCeEEEEecceeeccCChhhhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEE
Q 015279 215 ELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMN 294 (410)
Q Consensus 215 ~llp~~~KvLYLD~DvIV~~DL~eL~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVl 294 (410)
.++.++|-+..+|+|+++++++..= .| |..+|...--...... ..-.|.+.- -|...| .++.+..|+.+|++
T Consensus 143 ~~~~EvDyLfc~dvd~~F~~~vG~E---~L-g~lva~lHp~~y~~~~-~~FpYERrp-~S~AyI--p~~eGdfYY~ga~f 214 (298)
T 3ioh_A 143 RFLSEVDYLVCVDVDMEFRDHVGVE---IL-TPLFGTLHPGFYGSSR-EAFTYERRP-QSQAYI--PKDEGDFYYGGAFF 214 (298)
T ss_dssp THHHHCSEEEEEESSEEECSCBCGG---GC-SSEEEEBCTTTTTSCG-GGSCCCCCT-TSTTCC--CTTCCSCCBCTTEE
T ss_pred HHhhcCCEEEEecCCCeeccCccHH---Hh-HhhHhhcChhhhcCCc-ccCcccCCc-cccccc--cCCCCCeEEeeeec
Confidence 3566799999999999999987531 12 2334443221100000 000000000 011111 13455677777766
Q ss_pred EEechHHhhhcHHHHHHHHHHHhccC--CccccCcCCCcHHHHhc--cCCeeecCCccccc
Q 015279 295 IFDLRAWRKTNIRETYHSWLKENLKS--NLTMWKLGTLPPALIAF--KGHVHPIDPSWHLL 351 (410)
Q Consensus 295 linL~~wR~~~i~~~~~~~~~~~~~~--~~~~~dqd~L~~~n~~f--~~~~~~L~~~wN~~ 351 (410)
==-..+-. ++++.|..-+.+.... ...+.|..-| |-.| +.-++.|++.|++-
T Consensus 215 GGt~~~vl--~Lt~~C~~~i~~D~~n~IeA~WhDESHL---NKYfl~hKPtKvLSPEY~Wd 270 (298)
T 3ioh_A 215 GGSVQEVQ--RLTRACHQAMMVDQANGIEAVWHDESHL---NKYLLRHKPTKVLSPEYLWD 270 (298)
T ss_dssp EEEHHHHH--HHHHHHHHHHHHHHHTTCCCTTTHHHHH---HHHHHHSCCSEEECGGGSBC
T ss_pred CCcHHHHH--HHHHHHHHHHHHHHhCCceEeccchhhh---hhhhhhcCCCceeCHHHcCC
Confidence 33333322 3566666665543221 2345677777 4333 45679999998864
No 7
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=21.00 E-value=1.3e+02 Score=22.42 Aligned_cols=40 Identities=15% Similarity=0.247 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccc
Q 015279 13 FMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRL 55 (410)
Q Consensus 13 ~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl 55 (410)
.-||..|..+|++.........+|.++|+ |..+-=++.|+
T Consensus 18 evLKe~I~EL~e~~~qLE~EN~~Lk~~as---pEql~q~q~~l 57 (78)
T 1dip_A 18 EILKEQIRELVEKNSQLERENTLLKTLAS---PEQLEKFQSRL 57 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTS---SSCSCCCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HHHHHHHHhcc
Confidence 46899999999999999999999999988 77777777777
No 8
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=17.60 E-value=1.7e+02 Score=17.72 Aligned_cols=19 Identities=11% Similarity=0.310 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 015279 9 KTFGFMLRAMMEKFEREIR 27 (410)
Q Consensus 9 ~~~~~~l~~~~~~~e~~~~ 27 (410)
++++++|..-++.+|+-++
T Consensus 12 ~~ivq~lq~r~drle~tvq 30 (32)
T 2akf_A 12 NAIVQKLQERLDRLEETVQ 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4556666666666666554
No 9
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=14.58 E-value=74 Score=30.66 Aligned_cols=39 Identities=18% Similarity=0.417 Sum_probs=29.2
Q ss_pred chhhHHHHhhcccCC--CCCeEEEEecceeeccCChhhhhc
Q 015279 204 SLLNHLRIYIPELFP--HLDKVVFLDDDIVIQRDLSPLWEI 242 (410)
Q Consensus 204 s~~~y~R~~lp~llp--~~~KvLYLD~DvIV~~DL~eL~~~ 242 (410)
.+..+++--+-.+|. ..++||+||+|+++--|.=+-++.
T Consensus 82 ~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~ 122 (343)
T 1fo8_A 82 KIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQA 122 (343)
T ss_dssp HHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHH
T ss_pred hHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHH
Confidence 445666666666666 689999999999999997655443
No 10
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=14.01 E-value=2.9e+02 Score=18.15 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=27.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015279 7 DAKTFGFMLRAMMEKFEREIRESKFAELMNKHF 39 (410)
Q Consensus 7 ~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~l 39 (410)
|..+-++.|......+|+++.........|+|+
T Consensus 7 eLE~r~k~le~~naeLEervstLq~EN~mLRqv 39 (42)
T 2oqq_A 7 ELENRVKDLENKNSELEERLSTLQNENQMLRHI 39 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 456677888888999999999988888888875
Done!